Query 033437
Match_columns 119
No_of_seqs 112 out of 178
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 23:17:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkq_A Coatomer beta'-subunit; 86.3 1.6 5.6E-05 35.9 6.5 43 73-115 722-764 (814)
2 2yhc_A BAMD, UPF0169 lipoprote 82.7 9.9 0.00034 26.4 9.2 80 34-117 109-201 (225)
3 4gcn_A Protein STI-1; structur 82.6 2.7 9.3E-05 27.1 5.2 38 78-115 12-57 (127)
4 3ma5_A Tetratricopeptide repea 82.1 3.6 0.00012 25.3 5.4 45 72-116 5-57 (100)
5 4gco_A Protein STI-1; structur 79.2 3.8 0.00013 26.5 5.0 42 74-115 13-62 (126)
6 3upv_A Heat shock protein STI1 77.1 6.8 0.00023 24.3 5.6 30 71-100 35-64 (126)
7 1elr_A TPR2A-domain of HOP; HO 76.6 6.7 0.00023 23.5 5.3 62 35-115 18-94 (131)
8 2kat_A Uncharacterized protein 76.1 7.4 0.00025 23.8 5.5 40 76-115 21-68 (115)
9 3k9i_A BH0479 protein; putativ 75.9 5.6 0.00019 24.7 5.0 46 71-116 24-77 (117)
10 2lni_A Stress-induced-phosphop 75.7 7.9 0.00027 23.4 5.5 43 72-114 82-132 (133)
11 3vtx_A MAMA; tetratricopeptide 75.4 4.6 0.00016 26.6 4.6 39 78-116 9-55 (184)
12 3vtx_A MAMA; tetratricopeptide 75.3 7.1 0.00024 25.7 5.6 48 70-117 103-158 (184)
13 2fo7_A Synthetic consensus TPR 74.8 8.7 0.0003 22.8 5.5 41 76-116 71-119 (136)
14 1b89_A Protein (clathrin heavy 74.3 1.5 5E-05 36.8 2.2 44 72-115 120-163 (449)
15 2vyi_A SGTA protein; chaperone 74.0 10 0.00035 22.5 5.7 43 74-116 80-130 (131)
16 1na0_A Designed protein CTPR3; 73.9 9.9 0.00034 22.4 5.6 38 78-115 47-92 (125)
17 3as5_A MAMA; tetratricopeptide 73.9 8.7 0.0003 24.4 5.6 46 71-116 107-160 (186)
18 2r5s_A Uncharacterized protein 73.7 8.3 0.00028 25.7 5.6 47 71-117 105-161 (176)
19 2kck_A TPR repeat; tetratricop 73.4 4.9 0.00017 23.5 4.0 64 34-116 19-93 (112)
20 2kc7_A BFR218_protein; tetratr 73.0 7.3 0.00025 23.0 4.8 61 36-115 15-89 (99)
21 2dba_A Smooth muscle cell asso 72.9 9.7 0.00033 23.5 5.5 26 74-99 65-90 (148)
22 2pl2_A Hypothetical conserved 72.6 6.4 0.00022 27.5 5.0 29 71-99 2-30 (217)
23 1na3_A Designed protein CTPR2; 72.2 11 0.00038 21.4 5.6 24 76-99 45-68 (91)
24 1fch_A Peroxisomal targeting s 72.1 7.1 0.00024 28.3 5.3 47 71-117 282-347 (368)
25 3rkv_A Putative peptidylprolyl 71.8 7.6 0.00026 25.4 5.0 40 77-116 14-79 (162)
26 3q49_B STIP1 homology and U bo 71.2 11 0.00039 23.1 5.6 45 71-115 40-92 (137)
27 2ond_A Cleavage stimulation fa 69.9 29 0.001 25.2 8.5 42 74-115 203-256 (308)
28 1hh8_A P67PHOX, NCF-2, neutrop 69.7 11 0.00038 25.2 5.6 46 71-116 68-137 (213)
29 2vyi_A SGTA protein; chaperone 69.7 11 0.00036 22.4 5.0 45 71-115 43-95 (131)
30 3sz7_A HSC70 cochaperone (SGT) 69.7 12 0.0004 24.5 5.6 62 35-115 25-94 (164)
31 2xcb_A PCRH, regulatory protei 69.7 12 0.00041 24.0 5.6 63 34-115 31-101 (142)
32 4gco_A Protein STI-1; structur 69.1 13 0.00043 23.9 5.6 41 75-115 48-96 (126)
33 2pl2_A Hypothetical conserved 68.6 11 0.00037 26.2 5.5 45 71-115 115-166 (217)
34 2q7f_A YRRB protein; TPR, prot 68.6 7.5 0.00026 26.2 4.5 46 71-116 156-209 (243)
35 1elw_A TPR1-domain of HOP; HOP 68.4 14 0.00049 21.5 5.3 23 77-99 41-63 (118)
36 3upv_A Heat shock protein STI1 68.3 14 0.00049 22.7 5.6 31 70-100 68-98 (126)
37 2xcb_A PCRH, regulatory protei 68.2 10 0.00036 24.3 5.0 46 71-116 15-68 (142)
38 3gyz_A Chaperone protein IPGC; 68.0 12 0.00042 25.3 5.6 39 78-116 74-120 (151)
39 2kc7_A BFR218_protein; tetratr 67.4 11 0.00036 22.3 4.6 38 79-116 5-51 (99)
40 2vq2_A PILW, putative fimbrial 66.9 17 0.00058 23.9 5.9 46 71-116 110-163 (225)
41 2kck_A TPR repeat; tetratricop 66.8 8.1 0.00028 22.5 3.9 41 75-115 7-55 (112)
42 3mkq_A Coatomer beta'-subunit; 66.1 6.2 0.00021 32.4 4.2 40 78-117 685-724 (814)
43 4eqf_A PEX5-related protein; a 65.9 6.5 0.00022 28.8 4.0 46 71-116 278-343 (365)
44 1hxi_A PEX5, peroxisome target 65.8 13 0.00045 23.5 5.1 62 35-115 31-100 (121)
45 3gyz_A Chaperone protein IPGC; 65.7 11 0.00039 25.5 5.0 46 71-116 33-86 (151)
46 2fo7_A Synthetic consensus TPR 64.4 18 0.00063 21.2 5.3 41 76-116 37-85 (136)
47 2xpi_A Anaphase-promoting comp 64.3 12 0.00043 29.2 5.5 46 71-116 370-423 (597)
48 2l6j_A TPR repeat-containing p 63.7 20 0.00067 21.0 5.8 27 73-99 37-63 (111)
49 2vgx_A Chaperone SYCD; alterna 63.6 18 0.00061 23.8 5.6 16 35-50 35-50 (148)
50 3uq3_A Heat shock protein STI1 63.5 13 0.00046 25.0 5.0 22 78-99 42-63 (258)
51 3q49_B STIP1 homology and U bo 63.4 20 0.0007 21.9 5.6 31 70-100 73-103 (137)
52 2lni_A Stress-induced-phosphop 63.4 16 0.00055 21.9 5.0 62 36-116 31-100 (133)
53 2xpi_A Anaphase-promoting comp 63.1 9.4 0.00032 29.9 4.6 47 70-116 146-216 (597)
54 2fbn_A 70 kDa peptidylprolyl i 62.9 14 0.00048 24.9 5.0 41 76-116 40-104 (198)
55 3as5_A MAMA; tetratricopeptide 62.0 19 0.00066 22.6 5.3 45 72-116 74-126 (186)
56 1w3b_A UDP-N-acetylglucosamine 61.6 15 0.00051 27.2 5.3 45 71-115 132-184 (388)
57 2ho1_A Type 4 fimbrial biogene 61.5 23 0.00078 24.1 6.0 45 71-115 138-190 (252)
58 3sz7_A HSC70 cochaperone (SGT) 61.5 21 0.00072 23.2 5.6 43 74-116 11-61 (164)
59 3qou_A Protein YBBN; thioredox 61.2 18 0.00063 26.4 5.7 48 70-117 215-272 (287)
60 1elr_A TPR2A-domain of HOP; HO 61.1 23 0.00079 20.9 5.5 42 75-116 5-54 (131)
61 3u4t_A TPR repeat-containing p 61.0 33 0.0011 23.5 6.8 14 36-49 52-65 (272)
62 3ieg_A DNAJ homolog subfamily 60.9 40 0.0014 23.7 11.0 46 71-116 303-356 (359)
63 1xi4_A Clathrin heavy chain; a 60.6 12 0.00041 36.2 5.5 44 71-115 1193-1236(1630)
64 3cv0_A Peroxisome targeting si 60.1 20 0.00068 25.1 5.6 46 71-116 237-302 (327)
65 2l6j_A TPR repeat-containing p 59.8 24 0.00081 20.6 5.6 19 79-97 9-27 (111)
66 1hh8_A P67PHOX, NCF-2, neutrop 59.4 29 0.00098 23.0 6.1 44 73-116 36-87 (213)
67 2vq2_A PILW, putative fimbrial 59.3 24 0.00082 23.1 5.6 45 71-115 39-92 (225)
68 1pgy_A SWA2P; UBA, ubiquitin, 59.2 6.3 0.00022 23.3 2.2 32 79-111 10-42 (47)
69 2bn5_A PSI; nuclear protein, s 58.6 8.8 0.0003 21.1 2.6 22 77-98 5-26 (33)
70 1xnf_A Lipoprotein NLPI; TPR, 58.5 18 0.00062 24.8 5.0 17 34-50 18-34 (275)
71 4eqf_A PEX5-related protein; a 58.2 21 0.00071 26.0 5.5 40 76-115 249-296 (365)
72 2y4t_A DNAJ homolog subfamily 58.0 21 0.0007 26.7 5.6 45 71-115 57-109 (450)
73 2vgx_A Chaperone SYCD; alterna 56.0 23 0.00077 23.3 5.0 46 71-116 52-105 (148)
74 3mkr_A Coatomer subunit epsilo 55.5 25 0.00086 25.9 5.7 47 70-116 196-250 (291)
75 2c2l_A CHIP, carboxy terminus 55.3 20 0.00068 26.2 5.0 45 71-115 35-87 (281)
76 1a17_A Serine/threonine protei 55.0 26 0.0009 21.9 5.0 46 71-116 44-97 (166)
77 2yhc_A BAMD, UPF0169 lipoprote 54.3 43 0.0015 23.0 6.5 50 35-100 18-67 (225)
78 1a17_A Serine/threonine protei 53.8 36 0.0012 21.2 5.6 31 70-100 77-107 (166)
79 3cv0_A Peroxisome targeting si 53.7 30 0.001 24.2 5.6 45 71-115 169-221 (327)
80 3hym_B Cell division cycle pro 53.4 54 0.0018 22.8 8.1 42 75-116 237-286 (330)
81 2y4t_A DNAJ homolog subfamily 53.1 27 0.00094 26.0 5.6 42 71-112 91-143 (450)
82 2v5f_A Prolyl 4-hydroxylase su 53.1 38 0.0013 21.0 7.1 53 37-101 21-73 (104)
83 3qky_A Outer membrane assembly 53.0 54 0.0019 22.7 12.0 78 34-115 110-200 (261)
84 1na3_A Designed protein CTPR2; 52.7 29 0.00099 19.5 5.5 42 74-115 9-58 (91)
85 1elw_A TPR1-domain of HOP; HOP 51.9 21 0.00073 20.6 4.0 27 74-100 72-98 (118)
86 1p5q_A FKBP52, FK506-binding p 51.2 22 0.00074 26.8 4.8 44 73-116 146-212 (336)
87 3uq3_A Heat shock protein STI1 51.0 37 0.0013 22.7 5.6 41 75-115 174-222 (258)
88 2q7f_A YRRB protein; TPR, prot 50.7 38 0.0013 22.6 5.6 46 71-116 122-175 (243)
89 1fch_A Peroxisomal targeting s 50.2 34 0.0012 24.6 5.5 23 76-98 219-241 (368)
90 2fbn_A 70 kDa peptidylprolyl i 50.2 24 0.00081 23.7 4.4 42 75-116 123-172 (198)
91 3nf1_A KLC 1, kinesin light ch 50.0 52 0.0018 22.7 6.3 37 64-100 17-53 (311)
92 4ga2_A E3 SUMO-protein ligase 49.6 49 0.0017 21.5 5.9 43 74-116 65-115 (150)
93 1xi4_A Clathrin heavy chain; a 49.3 20 0.00068 34.7 5.0 45 68-115 1102-1149(1630)
94 4ga2_A E3 SUMO-protein ligase 49.0 27 0.00091 22.8 4.5 39 78-116 35-81 (150)
95 2ooe_A Cleavage stimulation fa 49.0 80 0.0027 24.7 7.9 41 75-115 426-478 (530)
96 1w3b_A UDP-N-acetylglucosamine 48.2 36 0.0012 25.0 5.5 45 71-115 302-354 (388)
97 3mkr_A Coatomer subunit epsilo 48.2 26 0.0009 25.8 4.7 33 71-103 127-159 (291)
98 3urz_A Uncharacterized protein 48.0 40 0.0014 23.0 5.4 38 78-115 58-103 (208)
99 2e2e_A Formate-dependent nitri 47.9 47 0.0016 21.5 5.6 41 75-115 45-94 (177)
100 3ieg_A DNAJ homolog subfamily 47.4 41 0.0014 23.6 5.5 45 71-115 151-203 (359)
101 1b89_A Protein (clathrin heavy 47.0 23 0.00079 29.4 4.6 38 78-115 152-192 (449)
102 3ma5_A Tetratricopeptide repea 47.0 24 0.00081 21.3 3.7 47 35-100 21-67 (100)
103 4gcn_A Protein STI-1; structur 46.4 45 0.0016 21.0 5.2 24 76-99 44-67 (127)
104 3hym_B Cell division cycle pro 46.1 46 0.0016 23.2 5.6 30 71-100 190-219 (330)
105 3qou_A Protein YBBN; thioredox 45.6 44 0.0015 24.3 5.6 55 62-116 105-167 (287)
106 3urz_A Uncharacterized protein 45.5 28 0.00097 23.8 4.3 42 73-114 87-136 (208)
107 3qky_A Outer membrane assembly 45.5 67 0.0023 22.2 6.4 51 34-100 28-78 (261)
108 4i17_A Hypothetical protein; T 44.6 63 0.0021 21.7 6.0 30 71-100 73-102 (228)
109 2dba_A Smooth muscle cell asso 44.2 52 0.0018 20.0 5.9 31 70-100 95-125 (148)
110 1na0_A Designed protein CTPR3; 44.0 33 0.0011 19.9 4.0 26 75-100 78-103 (125)
111 3u4t_A TPR repeat-containing p 43.9 41 0.0014 23.0 4.9 19 34-52 16-34 (272)
112 3mkq_B Coatomer subunit alpha; 43.0 26 0.00088 25.6 3.9 33 83-115 98-130 (177)
113 3k9i_A BH0479 protein; putativ 42.9 30 0.001 21.2 3.7 46 36-100 42-87 (117)
114 2gw1_A Mitochondrial precursor 42.6 40 0.0014 25.4 5.0 45 72-116 37-89 (514)
115 4f3v_A ESX-1 secretion system 42.1 28 0.00097 26.9 4.2 44 72-115 100-163 (282)
116 1kt0_A FKBP51, 51 kDa FK506-bi 41.7 38 0.0013 26.7 5.0 43 75-117 269-334 (457)
117 2gw1_A Mitochondrial precursor 41.4 47 0.0016 25.0 5.2 47 71-117 234-287 (514)
118 2r5s_A Uncharacterized protein 41.4 40 0.0014 22.2 4.4 30 71-100 37-66 (176)
119 2hr2_A Hypothetical protein; a 39.9 38 0.0013 24.0 4.3 39 78-116 15-73 (159)
120 4i17_A Hypothetical protein; T 39.4 71 0.0024 21.5 5.6 64 35-116 21-92 (228)
121 2kat_A Uncharacterized protein 38.9 36 0.0012 20.5 3.6 47 35-100 33-79 (115)
122 1qqe_A Vesicular transport pro 38.4 64 0.0022 23.2 5.5 41 76-116 160-215 (292)
123 2ond_A Cleavage stimulation fa 38.2 59 0.002 23.5 5.2 40 76-115 101-149 (308)
124 3ro3_A PINS homolog, G-protein 37.9 66 0.0022 19.3 5.5 21 79-99 54-74 (164)
125 2e2e_A Formate-dependent nitri 36.7 43 0.0015 21.6 4.0 30 71-100 112-141 (177)
126 3fp2_A TPR repeat-containing p 36.6 61 0.0021 24.6 5.3 42 74-115 59-108 (537)
127 4b4t_Q 26S proteasome regulato 36.1 80 0.0027 23.4 5.8 29 72-100 133-161 (434)
128 3sf4_A G-protein-signaling mod 35.8 59 0.002 23.4 4.9 43 74-116 307-363 (406)
129 2qfc_A PLCR protein; TPR, HTH, 34.7 43 0.0015 24.0 3.9 42 75-116 197-252 (293)
130 1pc2_A Mitochondria fission pr 34.4 89 0.003 22.0 5.5 55 29-100 43-97 (152)
131 4e6h_A MRNA 3'-END-processing 34.2 1.5E+02 0.0052 25.4 7.9 53 28-99 477-529 (679)
132 3rkv_A Putative peptidylprolyl 33.9 88 0.003 19.9 5.1 26 74-99 63-88 (162)
133 3sf4_A G-protein-signaling mod 33.6 61 0.0021 23.3 4.6 41 75-115 268-322 (406)
134 4g1t_A Interferon-induced prot 33.5 59 0.002 24.4 4.7 39 78-116 55-110 (472)
135 2yin_A DOCK2, dedicator of cyt 33.5 29 0.00098 28.5 3.1 26 88-113 93-118 (436)
136 2bez_C E2 glycoprotein; coiled 33.5 86 0.0029 20.2 4.7 48 34-102 25-73 (77)
137 1hxi_A PEX5, peroxisome target 33.0 41 0.0014 21.1 3.3 24 77-100 88-111 (121)
138 2vsy_A XCC0866; transferase, g 32.6 80 0.0027 25.0 5.6 27 73-99 90-116 (568)
139 3ro2_A PINS homolog, G-protein 32.5 1E+02 0.0034 21.1 5.5 23 77-99 86-108 (338)
140 1vp7_A Exodeoxyribonuclease VI 32.3 29 0.00098 23.4 2.4 30 33-62 28-57 (100)
141 1vcs_A Vesicle transport throu 32.1 26 0.0009 23.1 2.2 29 34-62 40-70 (102)
142 4b4t_R RPN7, 26S proteasome re 32.0 25 0.00087 28.1 2.5 26 76-101 133-158 (429)
143 1p5q_A FKBP52, FK506-binding p 31.7 77 0.0026 23.7 5.1 42 75-116 231-280 (336)
144 2if4_A ATFKBP42; FKBP-like, al 31.7 33 0.0011 25.9 3.0 44 74-117 179-247 (338)
145 3op0_A Signal transduction pro 31.3 64 0.0022 26.0 4.7 22 33-54 7-28 (323)
146 2pzi_A Probable serine/threoni 31.3 76 0.0026 26.5 5.4 47 71-117 464-518 (681)
147 2c2l_A CHIP, carboxy terminus 30.6 1.1E+02 0.0036 22.1 5.6 31 70-100 68-98 (281)
148 4g26_A Pentatricopeptide repea 30.2 2E+02 0.0069 23.2 7.7 37 79-115 110-155 (501)
149 3kae_A CDC27, possible protein 30.1 1.6E+02 0.0056 22.4 6.5 66 33-99 74-139 (242)
150 3ro2_A PINS homolog, G-protein 29.4 88 0.003 21.4 4.7 42 74-115 183-238 (338)
151 2ifu_A Gamma-SNAP; membrane fu 28.8 1.1E+02 0.0039 22.1 5.5 41 75-115 156-210 (307)
152 3fp2_A TPR repeat-containing p 28.5 99 0.0034 23.4 5.2 45 71-115 307-359 (537)
153 1ihg_A Cyclophilin 40; ppiase 28.4 89 0.003 24.0 5.0 40 77-116 226-289 (370)
154 2vsy_A XCC0866; transferase, g 27.9 94 0.0032 24.6 5.2 46 71-116 54-107 (568)
155 4f3v_A ESX-1 secretion system 26.8 69 0.0023 24.7 4.1 42 76-117 173-225 (282)
156 3ulq_A Response regulator aspa 25.6 1.1E+02 0.0039 22.4 5.0 43 73-115 183-239 (383)
157 3bux_B E3 ubiquitin-protein li 25.5 35 0.0012 27.6 2.2 22 33-54 30-51 (329)
158 1g2y_A Hepatocyte nuclear fact 25.1 60 0.002 17.6 2.4 20 75-94 7-26 (32)
159 2qyw_A Vesicle transport throu 24.8 25 0.00084 23.3 1.0 19 34-52 51-69 (102)
160 1qxo_A Chorismate synthase; be 24.7 31 0.0011 28.5 1.8 64 27-91 182-254 (388)
161 2xev_A YBGF; tetratricopeptide 24.6 1.2E+02 0.004 18.0 10.8 49 36-100 54-102 (129)
162 3k2t_A LMO2511 protein; lister 24.4 36 0.0012 20.5 1.6 19 33-51 11-29 (57)
163 3edt_B KLC 2, kinesin light ch 24.2 1.6E+02 0.0056 19.6 9.9 30 70-99 248-277 (283)
164 2qfc_A PLCR protein; TPR, HTH, 24.1 1.1E+02 0.0039 21.7 4.7 40 76-115 157-211 (293)
165 3q15_A PSP28, response regulat 24.0 2.2E+02 0.0074 20.9 9.5 35 78-112 304-341 (378)
166 3ka5_A Ribosome-associated pro 23.6 37 0.0013 21.1 1.6 19 33-51 11-29 (65)
167 1wao_1 Serine/threonine protei 23.6 1.4E+02 0.0048 23.7 5.5 27 73-99 73-99 (477)
168 4gyw_A UDP-N-acetylglucosamine 23.1 1.3E+02 0.0046 25.8 5.6 45 71-115 40-92 (723)
169 3mkq_B Coatomer subunit alpha; 22.8 1E+02 0.0035 22.4 4.1 44 71-117 34-77 (177)
170 4a1s_A PINS, partner of inscut 22.6 1.4E+02 0.0048 21.7 5.0 42 74-115 223-278 (411)
171 1nzn_A CGI-135 protein, fissio 22.5 1.1E+02 0.0038 20.9 4.1 53 31-100 48-100 (126)
172 1ezj_A Nucleocapsid phosphopro 22.4 28 0.00095 23.9 0.9 18 78-95 8-25 (115)
173 2wm9_A Dedicator of cytokinesi 21.7 33 0.0011 27.9 1.4 25 89-113 90-114 (428)
174 1rw2_A ATP-dependent DNA helic 21.2 2.2E+02 0.0074 20.1 5.5 20 35-54 49-68 (152)
175 4abn_A Tetratricopeptide repea 21.0 1.3E+02 0.0046 23.5 4.8 45 71-115 252-307 (474)
176 1qqe_A Vesicular transport pro 20.8 1.5E+02 0.005 21.3 4.7 23 78-100 81-103 (292)
177 3ulq_A Response regulator aspa 20.8 2.5E+02 0.0086 20.5 10.4 37 78-114 307-346 (383)
178 4gyw_A UDP-N-acetylglucosamine 20.8 1.6E+02 0.0055 25.3 5.6 46 71-116 74-127 (723)
179 1xnf_A Lipoprotein NLPI; TPR, 20.5 2E+02 0.0068 19.2 11.9 22 78-99 81-102 (275)
180 3bee_A Putative YFRE protein; 20.5 1.4E+02 0.0046 18.4 4.0 24 78-101 47-70 (93)
181 4a1g_A Mitotic checkpoint seri 20.0 1.2E+02 0.004 21.5 3.9 31 58-99 96-126 (152)
182 1sq1_A Chorismate synthase; st 20.0 32 0.0011 28.3 0.9 63 28-91 172-241 (370)
No 1
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.33 E-value=1.6 Score=35.85 Aligned_cols=43 Identities=12% Similarity=-0.186 Sum_probs=28.1
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcc
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEE 115 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~ 115 (119)
..+.-.++|+....-|....|...|.+++.+++++.+|..+|+
T Consensus 722 ~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~ 764 (814)
T 3mkq_A 722 NKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQR 764 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 4444456666666666666666666666666666666666665
No 2
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=82.71 E-value=9.9 Score=26.45 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=54.4
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCC--cccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh-----------
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPG--VTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL----------- 100 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~--~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L----------- 100 (119)
....+.|+..++.+++.++++... +..|+..+.. ..=.....+|..+...|-..+|+..|+++
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~----~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 184 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKD----RLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATR 184 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccH
Confidence 456789999999999988766432 2223322221 01112246788999999999999999874
Q ss_pred hcHHHHHHHhHhhcccC
Q 033437 101 VLWDSLILQLPIGEESS 117 (119)
Q Consensus 101 emWe~vI~Cy~~l~~~~ 117 (119)
+.|.....||..+|+.+
T Consensus 185 ~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 185 DALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCcH
Confidence 45777888888888753
No 3
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=82.64 E-value=2.7 Score=27.14 Aligned_cols=38 Identities=5% Similarity=0.066 Sum_probs=20.9
Q ss_pred HHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
+++|..+...|-+..|++.|++ ...|-+...||..+|+
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~ 57 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKK 57 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhh
Confidence 4566666666666666666654 2334455555555544
No 4
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=82.08 E-value=3.6 Score=25.27 Aligned_cols=45 Identities=18% Similarity=0.064 Sum_probs=29.3
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
......-.+|..+...|-...|++.|++. ..|-....||..+|+.
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~ 57 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRT 57 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Confidence 33444556777777777777777777764 4466666666666653
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=79.22 E-value=3.8 Score=26.50 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
-+--++.|..++..|-+..|++.|++ -+.|-+...||..+|+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 62 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLME 62 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhcc
Confidence 34445666666666666666666665 2345555555555554
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=77.07 E-value=6.8 Score=24.29 Aligned_cols=30 Identities=20% Similarity=0.057 Sum_probs=17.3
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
|.....-..+|..+..+|-...|++.|++.
T Consensus 35 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 64 (126)
T 3upv_A 35 PEDARGYSNRAAALAKLMSFPEAIADCNKA 64 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 334455555666666666666666666554
No 7
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=76.60 E-value=6.7 Score=23.47 Aligned_cols=62 Identities=18% Similarity=0.033 Sum_probs=41.3
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHH---------------
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFED--------------- 99 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~--------------- 99 (119)
...+.|..-++..++.. |........+|..+...|-...|++.|++
T Consensus 18 ~~~~~A~~~~~~a~~~~-------------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (131)
T 1elr_A 18 KDFDTALKHYDKAKELD-------------------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQI 78 (131)
T ss_dssp TCHHHHHHHHHHHHHHC-------------------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred cCHHHHHHHHHHHHhcC-------------------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHH
Confidence 34566776666666542 22245557889999999999999988876
Q ss_pred hhcHHHHHHHhHhhcc
Q 033437 100 LVLWDSLILQLPIGEE 115 (119)
Q Consensus 100 LemWe~vI~Cy~~l~~ 115 (119)
...|-....+|..+|+
T Consensus 79 ~~~~~~la~~~~~~~~ 94 (131)
T 1elr_A 79 AKAYARIGNSYFKEEK 94 (131)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 3345555666666654
No 8
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=76.12 E-value=7.4 Score=23.83 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
..-.+|..+...|-...|++.|++. +.|-....||...|+
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 68 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGD 68 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCC
Confidence 3445666666666666666666552 345555555555554
No 9
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=75.94 E-value=5.6 Score=24.72 Aligned_cols=46 Identities=9% Similarity=-0.109 Sum_probs=30.3
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|-...|++.|++. +.|-....||..+|+.
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 77 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRY 77 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCH
Confidence 444455567777777777777777777763 4556666666666653
No 10
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=75.65 E-value=7.9 Score=23.38 Aligned_cols=43 Identities=12% Similarity=-0.096 Sum_probs=31.1
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGE 114 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~ 114 (119)
.....--.+|..+...|-...|++.|++. +.|.....||...|
T Consensus 82 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 82 TFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 34455677888999999999999988764 44566666666554
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=75.40 E-value=4.6 Score=26.63 Aligned_cols=39 Identities=10% Similarity=-0.082 Sum_probs=29.1
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
-.+|..+...|-+.+|++.|++. +.|-....||..+|+.
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 55 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLP 55 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCH
Confidence 46788888888888888888873 4566777777776653
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=75.30 E-value=7.1 Score=25.69 Aligned_cols=48 Identities=15% Similarity=0.045 Sum_probs=38.5
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcccC
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~~ 117 (119)
.|..+.....+|..+...|-...|++.|++. +.|-....||..+|+.+
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 103 NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHH
Confidence 4556777888999999999999999999864 45777788888777643
No 13
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=74.76 E-value=8.7 Score=22.76 Aligned_cols=41 Identities=15% Similarity=0.083 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
....+|..+...|-...|++.|++. +.|...+.+|...|+.
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 119 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY 119 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccH
Confidence 3456788888899999998888763 4566777777766653
No 14
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=74.33 E-value=1.5 Score=36.76 Aligned_cols=44 Identities=11% Similarity=-0.031 Sum_probs=26.2
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEE 115 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~ 115 (119)
|-..-=..+|+.+...|...+|...|.+..-|...+.||..+|+
T Consensus 120 pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~ 163 (449)
T 1b89_A 120 PNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGE 163 (449)
T ss_dssp C----------------CTTTHHHHHHHTTCHHHHHHHHHTTTC
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHhhhHHHHHHHHHHhcc
Confidence 44445578999999999999999999999999999999999986
No 15
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=74.03 E-value=10 Score=22.49 Aligned_cols=43 Identities=14% Similarity=-0.008 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
....-.+|..+...|-...|++.|++. ..|.....||..+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 80 SKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 445578899999999999999999874 3467777788777764
No 16
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=73.94 E-value=9.9 Score=22.37 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=21.2
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
..+|..+...|-...|+..|++. ..|-....+|...|+
T Consensus 47 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 92 (125)
T 1na0_A 47 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD 92 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC
Confidence 45566666666666666666543 334455555555443
No 17
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=73.86 E-value=8.7 Score=24.35 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=32.4
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|-...|++.|++. +.|.....+|...|+.
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 160 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRH 160 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCH
Confidence 334455577888888888888888888774 5566667777666653
No 18
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=73.74 E-value=8.3 Score=25.69 Aligned_cols=47 Identities=17% Similarity=0.075 Sum_probs=39.2
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh----------hcHHHHHHHhHhhcccC
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL----------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L----------emWe~vI~Cy~~l~~~~ 117 (119)
|......-.+|..+...|-..+|++.|++. +.|.....+|..+|+.+
T Consensus 105 P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 105 PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 445677788999999999999999999873 26888999999998865
No 19
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=73.43 E-value=4.9 Score=23.48 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=42.8
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHH----------hhcH
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFED----------LVLW 103 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~----------LemW 103 (119)
.+..+.|+..++..++..+ .....-..+|..+...|-...|++.|++ .+.|
T Consensus 19 ~~~~~~A~~~~~~a~~~~~-------------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 19 AGNYTESIDLFEKAIQLDP-------------------EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp SCCHHHHHHHHHHHHHHCC-------------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred hhhHHHHHHHHHHHHHhCc-------------------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 3455677777777765432 2223345788888899999998888875 3456
Q ss_pred HHHHHHhHhh-ccc
Q 033437 104 DSLILQLPIG-EES 116 (119)
Q Consensus 104 e~vI~Cy~~l-~~~ 116 (119)
.....||..+ |+.
T Consensus 80 ~~l~~~~~~~~~~~ 93 (112)
T 2kck_A 80 AAKADALRYIEGKE 93 (112)
T ss_dssp HHHHHHHTTCSSCS
T ss_pred HHHHHHHHHHhCCH
Confidence 6667777766 654
No 20
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=73.03 E-value=7.3 Score=23.00 Aligned_cols=61 Identities=8% Similarity=0.002 Sum_probs=42.3
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhH-HHHHHHHHHHhcccHHHHHHHHHHh-------------h
Q 033437 36 TKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPA-LRKEYAKLLVSCGLIGEAIKNFEDL-------------V 101 (119)
Q Consensus 36 tvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~-l~~ela~~~~slG~~~sAl~ife~L-------------e 101 (119)
..+.|+..++..++..++ ... .--.+|..+...|-...|++.|++. .
T Consensus 15 ~~~~A~~~~~~al~~~p~-------------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 75 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPV-------------------GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARK 75 (99)
T ss_dssp CHHHHHHHHHHHHHHCSS-------------------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCC-------------------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 345677777776654322 222 4567899999999999999999874 3
Q ss_pred cHHHHHHHhHhhcc
Q 033437 102 LWDSLILQLPIGEE 115 (119)
Q Consensus 102 mWe~vI~Cy~~l~~ 115 (119)
..++++.+|...++
T Consensus 76 ~~~~a~~~~~~~~~ 89 (99)
T 2kc7_A 76 MVMDILNFYNKDMY 89 (99)
T ss_dssp HHHHHHHHHCCTTH
T ss_pred HHHHHHHHHHHHhc
Confidence 44777777776543
No 21
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.86 E-value=9.7 Score=23.53 Aligned_cols=26 Identities=12% Similarity=0.011 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
...-..+|..+...|-...|++.|++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~ 90 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASK 90 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 44455556666666666666666655
No 22
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=72.63 E-value=6.4 Score=27.45 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=16.4
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
|+.......+|..+...|-...|+..|++
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 30 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFER 30 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 44455555666666666666666666654
No 23
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=72.19 E-value=11 Score=21.37 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=11.8
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHH
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~ 99 (119)
.-..+|..+...|-...|++.|++
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~ 68 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 334445555555555555555544
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=72.11 E-value=7.1 Score=28.30 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=36.8
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH-------------------hhcHHHHHHHhHhhcccC
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED-------------------LVLWDSLILQLPIGEESS 117 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~-------------------LemWe~vI~Cy~~l~~~~ 117 (119)
|........+|..+...|-...|++.|++ -+.|.....||..+|+.+
T Consensus 282 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 347 (368)
T 1fch_A 282 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSD 347 (368)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGG
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChH
Confidence 45556677888999999999888888876 356888888888888765
No 25
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=71.81 E-value=7.6 Score=25.35 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHh--------------------------hcHHHHHHHhHhhccc
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFEDL--------------------------VLWDSLILQLPIGEES 116 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife~L--------------------------emWe~vI~Cy~~l~~~ 116 (119)
-++.|..++..|-+..|++.|.+. ..|-+...||..+|+-
T Consensus 14 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~ 79 (162)
T 3rkv_A 14 LRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDL 79 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 378899999999999999998762 4577788888888764
No 26
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=71.22 E-value=11 Score=23.15 Aligned_cols=45 Identities=11% Similarity=-0.101 Sum_probs=28.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|.....-..+|..+...|-...|++.|++. +.|-....||..+|+
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 92 (137)
T 3q49_B 40 PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 92 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhh
Confidence 444455566677777777777777777663 355666666666654
No 27
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=69.87 E-value=29 Score=25.22 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh------------hcHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL------------VLWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L------------emWe~vI~Cy~~l~~ 115 (119)
..+-..+|+.+...|-+..|..+|++. ++|...+.-+...|+
T Consensus 203 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~ 256 (308)
T 2ond_A 203 PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 256 (308)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC
Confidence 344477888888888888888888764 156666666666664
No 28
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=69.72 E-value=11 Score=25.18 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=34.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh------------------------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL------------------------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L------------------------emWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++. +.|-+...||..+|+.
T Consensus 68 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 68 KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH
Confidence 333455577899999999999999988775 5567777777777654
No 29
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=69.71 E-value=11 Score=22.44 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=28.1
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHhh--------cHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDLV--------LWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~Le--------mWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-...|++.|++.- .|-....+|...|+
T Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (131)
T 2vyi_A 43 PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNK 95 (131)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCC
Confidence 4455566677777777788888777777642 24444455555444
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=69.70 E-value=12 Score=24.47 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=39.3
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHH
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSL 106 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~v 106 (119)
...+.|+..++..++..++ ....-..+|..+..+|-...|++.|++. ..|-..
T Consensus 25 g~~~~A~~~~~~al~~~p~-------------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPA-------------------NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTT-------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCc-------------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456677777776654332 2344456777788888888888777763 456666
Q ss_pred HHHhHhhcc
Q 033437 107 ILQLPIGEE 115 (119)
Q Consensus 107 I~Cy~~l~~ 115 (119)
..||..+|+
T Consensus 86 g~~~~~~g~ 94 (164)
T 3sz7_A 86 GLARFDMAD 94 (164)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHccC
Confidence 666666655
No 31
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=69.68 E-value=12 Score=23.98 Aligned_cols=63 Identities=10% Similarity=-0.124 Sum_probs=33.3
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHH
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDS 105 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~ 105 (119)
....+.|...++.++..-++. ...-..+|..+...|-...|++.|++. +.|-.
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~-------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 91 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYD-------------------ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFH 91 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC-------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCcc-------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 344567777777777643321 112234566666666666666655542 23444
Q ss_pred HHHHhHhhcc
Q 033437 106 LILQLPIGEE 115 (119)
Q Consensus 106 vI~Cy~~l~~ 115 (119)
...||..+|+
T Consensus 92 lg~~~~~~g~ 101 (142)
T 2xcb_A 92 AAECHLQLGD 101 (142)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 4555555444
No 32
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=69.07 E-value=13 Score=23.90 Aligned_cols=41 Identities=15% Similarity=0.001 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
..-..+|..+..+|-...|++.|++ .+.|-....||..+|+
T Consensus 48 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 96 (126)
T 4gco_A 48 ILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE 96 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC
Confidence 3445678888888888888888776 2445666666666665
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=68.64 E-value=11 Score=26.20 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=28.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh-------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL-------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L-------emWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-..+|++.|++. +.|-+...+|..+|+
T Consensus 115 P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~ 166 (217)
T 2pl2_A 115 PRYAPLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSALAELYLSMGR 166 (217)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCC
Confidence 333444556777777777777777777663 455566666666554
No 34
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=68.60 E-value=7.5 Score=26.22 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=30.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|....|++.|++. +.|-....||...|+.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 156 ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCH
Confidence 333445566777777777777777777662 4566666677666654
No 35
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=68.44 E-value=14 Score=21.47 Aligned_cols=23 Identities=9% Similarity=-0.087 Sum_probs=12.9
Q ss_pred HHHHHHHHHhcccHHHHHHHHHH
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife~ 99 (119)
-..+|..+...|-...|++.|++
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~ 63 (118)
T 1elw_A 41 YSNRSAAYAKKGDYQKAYEDGCK 63 (118)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhccHHHHHHHHHH
Confidence 34455555556666666555554
No 36
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=68.34 E-value=14 Score=22.70 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=25.7
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
-|.....--.+|..+..+|-...|++.|++.
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 98 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAA 98 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 3556677788999999999999999999864
No 37
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=68.22 E-value=10 Score=24.29 Aligned_cols=46 Identities=13% Similarity=-0.131 Sum_probs=35.9
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|......-.+|..+...|-...|++.|++. ..|-....||..+|+-
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 68 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLY 68 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhH
Confidence 334555668899999999999999999874 4577777788777764
No 38
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=68.01 E-value=12 Score=25.32 Aligned_cols=39 Identities=5% Similarity=-0.275 Sum_probs=27.6
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
..+|..+...|-...|++.|++. +.|-+...||..+|+.
T Consensus 74 ~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 74 MGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCH
Confidence 45777888888888888877764 5566666677666654
No 39
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=67.44 E-value=11 Score=22.26 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=30.0
Q ss_pred HHHHHHHhcccHHHHHHHHHHh--------h-cHHHHHHHhHhhccc
Q 033437 79 EYAKLLVSCGLIGEAIKNFEDL--------V-LWDSLILQLPIGEES 116 (119)
Q Consensus 79 ela~~~~slG~~~sAl~ife~L--------e-mWe~vI~Cy~~l~~~ 116 (119)
+.|..+...|-...|++.|++. . .|-....||..+|+-
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~ 51 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDW 51 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCH
Confidence 5788889999999999999865 4 677777788777763
No 40
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=66.88 E-value=17 Score=23.91 Aligned_cols=46 Identities=13% Similarity=0.004 Sum_probs=31.3
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++ ...|...+.+|...|+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 110 PTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 44556667778888888888888887765 34466666666666653
No 41
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=66.82 E-value=8.1 Score=22.46 Aligned_cols=41 Identities=22% Similarity=0.024 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
..-..+|..+...|-...|++.|++. +.|-....||...|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~ 55 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLER 55 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccC
Confidence 34457888999999999999988764 346666666666655
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=66.13 E-value=6.2 Score=32.37 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=36.6
Q ss_pred HHHHHHHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcccC
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEESS 117 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~~~ 117 (119)
+++|+..+.-|-+..|...|.+++.++.+...|...|..+
T Consensus 685 ~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~ 724 (814)
T 3mkq_A 685 RALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKE 724 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHH
Confidence 7899999999999999999999999999999999877543
No 43
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=65.94 E-value=6.5 Score=28.80 Aligned_cols=46 Identities=22% Similarity=0.348 Sum_probs=31.4
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------------------hhcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------------------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------------------LemWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|-...|++.|++ -..|.....||..+|+.
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 343 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQP 343 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCH
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcH
Confidence 44455566677777777777777777765 35677777777777764
No 44
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=65.78 E-value=13 Score=23.55 Aligned_cols=62 Identities=8% Similarity=-0.004 Sum_probs=40.6
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHH
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSL 106 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~v 106 (119)
...+.|+..++..+..-++ ....--.+|..+...|-...|+..|++. +.|-..
T Consensus 31 g~~~~A~~~~~~al~~~P~-------------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~l 91 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPE-------------------REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAAL 91 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTT-------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCC-------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456788777777764332 2333456788888888888888887763 456666
Q ss_pred HHHhHhhcc
Q 033437 107 ILQLPIGEE 115 (119)
Q Consensus 107 I~Cy~~l~~ 115 (119)
..||...|+
T Consensus 92 a~~~~~~g~ 100 (121)
T 1hxi_A 92 AVSHTNEHN 100 (121)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHcCC
Confidence 666666655
No 45
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=65.70 E-value=11 Score=25.49 Aligned_cols=46 Identities=24% Similarity=0.038 Sum_probs=37.8
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|.....--.+|..+...|-..+|++.|++. +.|-....||..+|+-
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 86 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQF 86 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccH
Confidence 445666788999999999999999999874 5688888888887764
No 46
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=64.37 E-value=18 Score=21.22 Aligned_cols=41 Identities=15% Similarity=0.083 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
.-..+|..+...|-...|++.|++. ..|-....+|...|+-
T Consensus 37 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (136)
T 2fo7_A 37 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY 85 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCH
Confidence 3356899999999999999999875 3466777777776653
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=64.31 E-value=12 Score=29.17 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=35.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|.+.+|+++|++ .+.|...+.+|...|+-
T Consensus 370 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 423 (597)
T 2xpi_A 370 PEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEH 423 (597)
T ss_dssp TTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 45555666788888899999999998886 34678888888777763
No 48
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=63.73 E-value=20 Score=21.02 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=16.8
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
....-..+|..+..+|-...|++.|++
T Consensus 37 ~~~~~~~lg~~~~~~g~~~~A~~~~~~ 63 (111)
T 2l6j_A 37 NPVGYSNKAMALIKLGEYTQAIQMCQQ 63 (111)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 344445666666666666666666665
No 49
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=63.57 E-value=18 Score=23.78 Aligned_cols=16 Identities=13% Similarity=-0.110 Sum_probs=10.5
Q ss_pred chhhHHHHHHHHHHhh
Q 033437 35 RTKGRALEMMDKLVEG 50 (119)
Q Consensus 35 rtvERa~lQmq~LVd~ 50 (119)
...+.|+...+.+++.
T Consensus 35 g~~~~A~~~~~~al~~ 50 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVL 50 (148)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHc
Confidence 3456677777777754
No 50
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=63.53 E-value=13 Score=25.01 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=11.6
Q ss_pred HHHHHHHHhcccHHHHHHHHHH
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~ 99 (119)
..+|..+...|-...|++.|++
T Consensus 42 ~~~~~~~~~~~~~~~A~~~~~~ 63 (258)
T 3uq3_A 42 NNRAAAEYEKGEYETAISTLND 63 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHH
Confidence 4455555555555555555544
No 51
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=63.43 E-value=20 Score=21.93 Aligned_cols=31 Identities=13% Similarity=-0.052 Sum_probs=26.7
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
-|......-.+|..+...|-...|++.|++.
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 103 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRA 103 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3666778888999999999999999999874
No 52
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=63.38 E-value=16 Score=21.89 Aligned_cols=62 Identities=11% Similarity=0.000 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHH
Q 033437 36 TKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLI 107 (119)
Q Consensus 36 tvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI 107 (119)
..+.|+.-++..++..+ .....-..+|..+...|-...|++.|++. +.|-...
T Consensus 31 ~~~~A~~~~~~al~~~~-------------------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 31 DYPQAMKHYTEAIKRNP-------------------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp CSHHHHHHHHHHHTTCT-------------------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC-------------------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 44667777777665422 12344567899999999999999998763 5566677
Q ss_pred HHhHhhccc
Q 033437 108 LQLPIGEES 116 (119)
Q Consensus 108 ~Cy~~l~~~ 116 (119)
.||..+|+-
T Consensus 92 ~~~~~~~~~ 100 (133)
T 2lni_A 92 AALEAMKDY 100 (133)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHHhhH
Confidence 777776653
No 53
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=63.07 E-value=9.4 Score=29.90 Aligned_cols=47 Identities=13% Similarity=-0.207 Sum_probs=41.0
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHH------------------------HhhcHHHHHHHhHhhccc
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFE------------------------DLVLWDSLILQLPIGEES 116 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife------------------------~LemWe~vI~Cy~~l~~~ 116 (119)
.|+.......+|..+...|.+.+|+++|+ ....|-..+.+|...|+-
T Consensus 146 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 216 (597)
T 2xpi_A 146 YNRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNF 216 (597)
T ss_dssp GGTCHHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCH
T ss_pred cccchhHHHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHHHHHHHHcCCH
Confidence 57778888999999999999999999999 367788899999888864
No 54
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=62.94 E-value=14 Score=24.86 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh------------------------hcHHHHHHHhHhhccc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL------------------------VLWDSLILQLPIGEES 116 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L------------------------emWe~vI~Cy~~l~~~ 116 (119)
.-..+|..+...|-...|++.|.+. ..|-+...||..+|+-
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 104 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDY 104 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3467889999999999999999864 5777888888877764
No 55
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=61.99 E-value=19 Score=22.63 Aligned_cols=45 Identities=9% Similarity=-0.150 Sum_probs=32.9
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
.....-..+|..+...|-...|++.|++. ..|-....+|...|+-
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF 126 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH
Confidence 34455677899999999999999998864 4566666777666653
No 56
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=61.62 E-value=15 Score=27.15 Aligned_cols=45 Identities=24% Similarity=0.375 Sum_probs=32.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-...|++.|++. ..|.....+|...|+
T Consensus 132 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 184 (388)
T 1w3b_A 132 PDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGE 184 (388)
T ss_dssp TTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 555666677888888888888888888764 456666666666554
No 57
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=61.52 E-value=23 Score=24.11 Aligned_cols=45 Identities=13% Similarity=0.017 Sum_probs=29.1
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-...|++.|++ .+.|-....+|...|+
T Consensus 138 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 190 (252)
T 2ho1_A 138 PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE 190 (252)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Confidence 44556666777777777777777777766 2345556666655554
No 58
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=61.51 E-value=21 Score=23.15 Aligned_cols=43 Identities=7% Similarity=0.015 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
-..-..+|..+...|-...|++.|++. ..|-+...||..+|+-
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 61 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQH 61 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCH
Confidence 344578999999999999999999864 5677888888887764
No 59
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=61.25 E-value=18 Score=26.38 Aligned_cols=48 Identities=19% Similarity=0.043 Sum_probs=41.0
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh----------hcHHHHHHHhHhhcccC
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL----------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L----------emWe~vI~Cy~~l~~~~ 117 (119)
-|......-.+|..+...|-..+|++.|+++ +.|.....+|..+|+.+
T Consensus 215 ~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 215 NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 5777888899999999999999999999874 45888899999888754
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=61.09 E-value=23 Score=20.93 Aligned_cols=42 Identities=10% Similarity=-0.035 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
..-..+|..+...|-...|++.|++. ..|-....||...|+-
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~ 54 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDY 54 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccH
Confidence 34467899999999999999999864 3466667777666653
No 61
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=60.96 E-value=33 Score=23.47 Aligned_cols=14 Identities=7% Similarity=0.014 Sum_probs=9.1
Q ss_pred hhhHHHHHHHHHHh
Q 033437 36 TKGRALEMMDKLVE 49 (119)
Q Consensus 36 tvERa~lQmq~LVd 49 (119)
..+.|+.-++..++
T Consensus 52 ~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 52 KYDLAQKDIETYFS 65 (272)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh
Confidence 34567777777666
No 62
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=60.91 E-value=40 Score=23.68 Aligned_cols=46 Identities=20% Similarity=0.204 Sum_probs=35.6
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++. +.|..+..++..+++.
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 344556678999999999999999999873 4677777777776653
No 63
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=60.61 E-value=12 Score=36.20 Aligned_cols=44 Identities=11% Similarity=0.068 Sum_probs=38.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~ 115 (119)
|....+. .+|+.+.+.|...+|...|.+-.-|.....||..+|+
T Consensus 1193 ~n~ad~~-~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge 1236 (1630)
T 1xi4_A 1193 PNNAHIQ-QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGE 1236 (1630)
T ss_pred CCHHHHH-HHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCC
Confidence 3344555 4999999999999999999999999999999999886
No 64
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=60.14 E-value=20 Score=25.10 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=36.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------------------hhcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------------------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------------------LemWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++ .+.|.....||..+|+.
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCH
Confidence 44455667889999999999999999874 45777788888888764
No 65
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=59.77 E-value=24 Score=20.64 Aligned_cols=19 Identities=32% Similarity=0.436 Sum_probs=8.9
Q ss_pred HHHHHHHhcccHHHHHHHH
Q 033437 79 EYAKLLVSCGLIGEAIKNF 97 (119)
Q Consensus 79 ela~~~~slG~~~sAl~if 97 (119)
.+|..+...|-...|++.|
T Consensus 9 ~~g~~~~~~~~~~~A~~~~ 27 (111)
T 2l6j_A 9 EQGNSLFKQGLYREAVHCY 27 (111)
T ss_dssp HHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH
Confidence 3444444444444444444
No 66
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=59.44 E-value=29 Score=23.03 Aligned_cols=44 Identities=14% Similarity=-0.046 Sum_probs=34.0
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
....-..+|..+...|-...|++.|++. +.|-+...||..+|+-
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~ 87 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKY 87 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccH
Confidence 3456688999999999999999999864 4566667777766653
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=59.30 E-value=24 Score=23.13 Aligned_cols=45 Identities=11% Similarity=-0.040 Sum_probs=30.2
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhh-cc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIG-EE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l-~~ 115 (119)
|.....-..+|..+...|-...|++.|++. ..|-....||... |+
T Consensus 39 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 92 (225)
T 2vq2_A 39 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR 92 (225)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCC
T ss_pred ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCc
Confidence 444556667788888888888888888774 3455566666655 54
No 68
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=59.22 E-value=6.3 Score=23.27 Aligned_cols=32 Identities=38% Similarity=0.457 Sum_probs=26.2
Q ss_pred HHHHHHHhccc-HHHHHHHHHHhhcHHHHHHHhH
Q 033437 79 EYAKLLVSCGL-IGEAIKNFEDLVLWDSLILQLP 111 (119)
Q Consensus 79 ela~~~~slG~-~~sAl~ife~LemWe~vI~Cy~ 111 (119)
|+| ++||+|. +..|-+.|++=-+.|++|+=..
T Consensus 10 EiA-kLMSLGl~id~A~~~Ye~gi~ye~~ie~~k 42 (47)
T 1pgy_A 10 EIA-RLMSLGLSIEEATEFYENDVTYERYLEILK 42 (47)
T ss_dssp HHH-HHHHHCCCSHHHHHHHHHHCSSHHHHHHHH
T ss_pred HHH-HHHHccCChhhHHHHHHcCchHHHHHHHHH
Confidence 555 5678895 8999999999999999987544
No 69
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=58.62 E-value=8.8 Score=21.14 Aligned_cols=22 Identities=27% Similarity=0.215 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcccHHHHHHHHH
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFE 98 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife 98 (119)
-.++++-|.|+|++++|--|=.
T Consensus 5 SaQW~eYYrsiG~~~eAeaIe~ 26 (33)
T 2bn5_A 5 SAQWAEYYRSVGKIEEAEAIEK 26 (33)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHH
Confidence 3678999999999999976633
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=58.48 E-value=18 Score=24.77 Aligned_cols=17 Identities=12% Similarity=0.257 Sum_probs=10.6
Q ss_pred cchhhHHHHHHHHHHhh
Q 033437 34 SRTKGRALEMMDKLVEG 50 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~ 50 (119)
....+.|+..++..++.
T Consensus 18 ~~~~~~A~~~~~~~~~~ 34 (275)
T 1xnf_A 18 TLQQEVILARMEQILAS 34 (275)
T ss_dssp CHHHHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHHHhc
Confidence 34556677777766654
No 71
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=58.15 E-value=21 Score=26.03 Aligned_cols=40 Identities=13% Similarity=0.011 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
.-..+|..+...|-...|++.|++ .+.|-....||..+|+
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 296 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGA 296 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC
Confidence 334455555555555555555554 2334444455544444
No 72
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=58.05 E-value=21 Score=26.67 Aligned_cols=45 Identities=11% Similarity=-0.038 Sum_probs=27.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH--------hhcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED--------LVLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~--------LemWe~vI~Cy~~l~~ 115 (119)
|.....-..+|..+...|....|++.|++ ...|-....||...|+
T Consensus 57 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 109 (450)
T 2y4t_A 57 PDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK 109 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 44455555666666666666666666666 2345556666665554
No 73
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=55.98 E-value=23 Score=23.25 Aligned_cols=46 Identities=11% Similarity=-0.182 Sum_probs=26.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++. +.|-+...||..+|+.
T Consensus 52 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 52 HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCH
Confidence 333444455666666666666666666664 2455555566655553
No 74
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=55.49 E-value=25 Score=25.87 Aligned_cols=47 Identities=11% Similarity=-0.067 Sum_probs=40.7
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
.|+...+--.+|..+..+|-..+|.+.|++. +.|-+.+.++..+|+.
T Consensus 196 ~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 196 CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Confidence 5777888889999999999999999999982 4688899999888875
No 75
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=55.32 E-value=20 Score=26.15 Aligned_cols=45 Identities=11% Similarity=-0.101 Sum_probs=25.6
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|....+-..+|..+..+|-..+|++.|++. ..|-....+|..+|+
T Consensus 35 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 87 (281)
T 2c2l_A 35 PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 87 (281)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 444455556666666666666666666652 334445555555544
No 76
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=54.98 E-value=26 Score=21.89 Aligned_cols=46 Identities=7% Similarity=-0.126 Sum_probs=33.2
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+...|-...|++.|++. ..|-....||..+|+.
T Consensus 44 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~ 97 (166)
T 1a17_A 44 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKF 97 (166)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccH
Confidence 445666777888888888888888888774 3466666677666653
No 77
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=54.26 E-value=43 Score=23.04 Aligned_cols=50 Identities=6% Similarity=-0.017 Sum_probs=38.3
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
...++|...++.+++..+++. ......-.+|..+...|-...|++.|+++
T Consensus 18 g~~~~A~~~~~~~~~~~p~~~----------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 67 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYPFGP----------------YSQQVQLDLIYAYYKNADLPLAQAAIDRF 67 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTST----------------THHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCh----------------HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 456789999999998765422 12244567899999999999999999885
No 78
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=53.81 E-value=36 Score=21.22 Aligned_cols=31 Identities=13% Similarity=0.061 Sum_probs=26.6
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
.|.....--.+|..+...|-..+|++.|++.
T Consensus 77 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 107 (166)
T 1a17_A 77 DKKYIKGYYRRAASNMALGKFRAALRDYETV 107 (166)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3666777788999999999999999999885
No 79
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=53.68 E-value=30 Score=24.18 Aligned_cols=45 Identities=22% Similarity=0.276 Sum_probs=31.3
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-...|++.|++. +.|.....+|...|+
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 221 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNR 221 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 445566677788888888888888887763 456666666666654
No 80
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=53.41 E-value=54 Score=22.82 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
..-..+|..+...|-...|++.|++. +.|.....||...|+.
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~ 286 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNF 286 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccH
Confidence 44556777888888888888777763 4566667777666653
No 81
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=53.13 E-value=27 Score=25.97 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=32.9
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh-----------hcHHHHHHHhHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL-----------VLWDSLILQLPI 112 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L-----------emWe~vI~Cy~~ 112 (119)
|........+|..+...|-...|++.|++. +.|..++..+..
T Consensus 91 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (450)
T 2y4t_A 91 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEM 143 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHH
Confidence 555677788999999999999999999987 556655555443
No 82
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=53.12 E-value=38 Score=20.96 Aligned_cols=53 Identities=8% Similarity=-0.001 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHhh
Q 033437 37 KGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDLV 101 (119)
Q Consensus 37 vERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~Le 101 (119)
-++|..-++.-++...++..+ -++...+-..||.-+..+|-+..|+..|++.-
T Consensus 21 y~~A~~W~~~Al~~~~~~~~~------------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 21 YYHTELWMEQALRQLDEGEIS------------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC------------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhccCCC------------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 456666777666666443311 23455666899999999999999999999864
No 83
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=52.99 E-value=54 Score=22.74 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=48.2
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCCcc--cchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh-----------
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPGVT--QRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL----------- 100 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~~~--~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L----------- 100 (119)
....+.|+.-++.+++..+++..... .++..+-. -.=.-.-.+|..+...|-..+|+..|+++
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~----~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 185 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRA----KLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWAD 185 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHH
T ss_pred chhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHH
Confidence 55677888888888887765431110 01100000 00001257899999999999999999875
Q ss_pred hcHHHHHHHhHhhcc
Q 033437 101 VLWDSLILQLPIGEE 115 (119)
Q Consensus 101 emWe~vI~Cy~~l~~ 115 (119)
+.|-....||..+|+
T Consensus 186 ~a~~~l~~~~~~~g~ 200 (261)
T 3qky_A 186 DALVGAMRAYIAYAE 200 (261)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 346666777776644
No 84
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=52.67 E-value=29 Score=19.47 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
...-..+|..+...|-...|++.|++. +.|-....||...|+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 58 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD 58 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhh
Confidence 344456666777777777777666542 455555566655554
No 85
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.90 E-value=21 Score=20.64 Aligned_cols=27 Identities=19% Similarity=0.018 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
...-..+|..+...|-...|.+.|++.
T Consensus 72 ~~~~~~~a~~~~~~~~~~~A~~~~~~~ 98 (118)
T 1elw_A 72 GKGYSRKAAALEFLNRFEEAKRTYEEG 98 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 445578899999999999999999874
No 86
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=51.20 E-value=22 Score=26.81 Aligned_cols=44 Identities=14% Similarity=0.074 Sum_probs=36.0
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHH-----------------------hhcHHHHHHHhHhhccc
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFED-----------------------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~-----------------------LemWe~vI~Cy~~l~~~ 116 (119)
.......+|..+...|-...|++.|++ ...|-+...||..+|+-
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 212 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAF 212 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 455667889999999999999999986 36788888888888764
No 87
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=50.98 E-value=37 Score=22.69 Aligned_cols=41 Identities=15% Similarity=-0.079 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
..-..+|..+...|-..+|++.|++. +.|-....||...|+
T Consensus 174 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 222 (258)
T 3uq3_A 174 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 222 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 33445566666666666666665542 334445555555444
No 88
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=50.74 E-value=38 Score=22.56 Aligned_cols=46 Identities=11% Similarity=-0.148 Sum_probs=30.7
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|-...|++.|++. +.|-....+|...|+.
T Consensus 122 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 122 MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGML 175 (243)
T ss_dssp CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCH
Confidence 334455667788888888888888888763 3455666666666553
No 89
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=50.20 E-value=34 Score=24.57 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=11.1
Q ss_pred HHHHHHHHHHhcccHHHHHHHHH
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFE 98 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife 98 (119)
.-..+|..+...|-...|++.|+
T Consensus 219 ~~~~l~~~~~~~g~~~~A~~~~~ 241 (368)
T 1fch_A 219 VQCGLGVLFNLSGEYDKAVDCFT 241 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 33444555555555555554444
No 90
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=50.16 E-value=24 Score=23.68 Aligned_cols=42 Identities=17% Similarity=0.072 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
..--.+|..+..+|-...|++.|++. +.|.....|+..+|+.
T Consensus 123 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 123 KALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 34456788888888888888888764 4566777777766653
No 91
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=50.04 E-value=52 Score=22.69 Aligned_cols=37 Identities=14% Similarity=-0.100 Sum_probs=31.0
Q ss_pred hhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 64 FCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 64 ~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
--.....|..+..-..+|..+...|-...|++.|++.
T Consensus 17 q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 53 (311)
T 3nf1_A 17 QGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQA 53 (311)
T ss_dssp SSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444566788889999999999999999999999775
No 92
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=49.62 E-value=49 Score=21.46 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
...-..+|..+...|-...|++.|++. +.|-+...+|...|+.
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 344466788888888888888888763 4566667777766654
No 93
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=49.29 E-value=20 Score=34.72 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=35.8
Q ss_pred cCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHhhc---HHHHHHHhHhhcc
Q 033437 68 ICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDLVL---WDSLILQLPIGEE 115 (119)
Q Consensus 68 ~~~pp~W~l~~ela~~~~slG~~~sAl~ife~Lem---We~vI~Cy~~l~~ 115 (119)
+..|..|. .+|..+...|.+++|++-|++=+- |.+|+.|+..+|+
T Consensus 1102 vn~p~vWs---qLAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGk 1149 (1630)
T 1xi4_A 1102 CNEPAVWS---QLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGN 1149 (1630)
T ss_pred cCCHHHHH---HHHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCC
Confidence 56688887 899999999999999999987663 4446666666665
No 94
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=49.05 E-value=27 Score=22.80 Aligned_cols=39 Identities=21% Similarity=0.034 Sum_probs=31.4
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
-.+|..|...|-...|++.|++. +.|-....||..+|+.
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 36899999999999999999873 4577777777777754
No 95
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=48.98 E-value=80 Score=24.73 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------h----cHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------V----LWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------e----mWe~vI~Cy~~l~~ 115 (119)
.+-..+|+.+.+.|-+..|..+|++. + +|...+.-....|+
T Consensus 426 ~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~ 478 (530)
T 2ooe_A 426 EYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 478 (530)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC
Confidence 34467888888888888888888874 1 67666655555554
No 96
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=48.23 E-value=36 Score=25.04 Aligned_cols=45 Identities=20% Similarity=0.193 Sum_probs=22.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|+....-..+|..+...|-...|++.|++. +.|.....+|...|+
T Consensus 302 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 354 (388)
T 1w3b_A 302 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 354 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTC
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 333444445555555555555555555542 234444445444443
No 97
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=48.16 E-value=26 Score=25.75 Aligned_cols=33 Identities=9% Similarity=-0.038 Sum_probs=22.1
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHhhcH
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDLVLW 103 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~LemW 103 (119)
|..++....+|..+..+|-...|...|++.--+
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~ 159 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQ 159 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 566666666777777777777777777666433
No 98
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=48.01 E-value=40 Score=23.01 Aligned_cols=38 Identities=11% Similarity=-0.054 Sum_probs=21.6
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
..+|..+...|-...|++.|++. +.|-....+|...|+
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 103 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQ 103 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC
Confidence 34667777777777776666542 344444444444443
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=47.88 E-value=47 Score=21.46 Aligned_cols=41 Identities=5% Similarity=0.002 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHH-hHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQ-LPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~C-y~~l~~ 115 (119)
..-..+|..+...|-...|++.|++. ..|-....| |...|+
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 34456777777777777777777653 345555555 544444
No 100
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=47.37 E-value=41 Score=23.61 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=29.8
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|........+|..+...|-...|++.|++. +.|-....+|...|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 203 (359)
T 3ieg_A 151 VWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGD 203 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 444556667777888888888888777753 345666666666554
No 101
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=47.00 E-value=23 Score=29.45 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=32.5
Q ss_pred HHHHHHHHhcccHHHHHHHHHH---hhcHHHHHHHhHhhcc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED---LVLWDSLILQLPIGEE 115 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~---LemWe~vI~Cy~~l~~ 115 (119)
..+|+-++.+|.+.+|.+.|++ .+.|-+|+.++..+|+
T Consensus 152 ~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~e 192 (449)
T 1b89_A 152 GRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKE 192 (449)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCc
Confidence 5789999999999999999998 5678888888877763
No 102
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=46.99 E-value=24 Score=21.34 Aligned_cols=47 Identities=21% Similarity=0.248 Sum_probs=33.7
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
...+.|+..++..++.-++ ....--.+|..+..+|-...|++.|++.
T Consensus 21 g~~~~A~~~~~~al~~~p~-------------------~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 21 DNASRALALFEELVETDPD-------------------YVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp TCHHHHHHHHHHHHHHSTT-------------------CTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC-------------------cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3457788888887765332 1123356899999999999999999863
No 103
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=46.42 E-value=45 Score=21.01 Aligned_cols=24 Identities=13% Similarity=0.115 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHH
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~ 99 (119)
.-..+|..+..+|-...|++.|++
T Consensus 44 ~~~nlg~~~~~~~~~~~A~~~~~~ 67 (127)
T 4gcn_A 44 FYNNKAAVYFEEKKFAECVQFCEK 67 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhHHHHHHHhhhHHHHHHHHHH
Confidence 345789999999999999888765
No 104
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=46.12 E-value=46 Score=23.20 Aligned_cols=30 Identities=27% Similarity=0.201 Sum_probs=18.6
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
|.....-..+|..+...|-...|++.|++.
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 219 (330)
T 3hym_B 190 PEDPFVMHEVGVVAFQNGEWKTAEKWFLDA 219 (330)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 334455556677777777777777666543
No 105
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=45.62 E-value=44 Score=24.28 Aligned_cols=55 Identities=18% Similarity=0.030 Sum_probs=41.7
Q ss_pred hhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 62 IPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 62 l~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
+.-+..-.+|...+..-++|..+...|-...|++.|++. +.|-....+|...|+.
T Consensus 105 l~~~l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~ 167 (287)
T 3qou_A 105 IRALLDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRS 167 (287)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCH
Confidence 334444456888888899999999999999999999975 4566666777666653
No 106
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=45.47 E-value=28 Score=23.81 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=32.6
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhc
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGE 114 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~ 114 (119)
....-..+|..+...|-...|++.|++. +.|-....+|...|
T Consensus 87 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 87 NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 3455578899999999999999999985 56666766765544
No 107
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=45.46 E-value=67 Score=22.25 Aligned_cols=51 Identities=12% Similarity=-0.013 Sum_probs=39.3
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
...-+.|+..++.+++..++. |-.....-.+|..+...|-...|++.|+++
T Consensus 28 ~g~~~~A~~~~~~~l~~~p~~----------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 78 (261)
T 3qky_A 28 QGKYDRAIEYFKAVFTYGRTH----------------EWAADAQFYLARAYYQNKEYLLAASEYERF 78 (261)
T ss_dssp TTCHHHHHHHHHHHGGGCSCS----------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCCC----------------cchHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 445688999999888866532 223455678999999999999999999885
No 108
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=44.65 E-value=63 Score=21.75 Aligned_cols=30 Identities=7% Similarity=-0.140 Sum_probs=22.3
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
|.....-..+|..+...|-...|++.|++.
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 102 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEG 102 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 334455567888888888888888888764
No 109
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.21 E-value=52 Score=19.96 Aligned_cols=31 Identities=10% Similarity=-0.006 Sum_probs=24.4
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
.|.....--.+|..+..+|-...|++.|++.
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 125 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRC 125 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3555666778888888889988888888875
No 110
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=44.05 E-value=33 Score=19.91 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
.....+|..+...|-...|++.|++.
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~~ 103 (125)
T 1na0_A 78 EAWYNLGNAYYKQGDYDEAIEYYQKA 103 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 44468899999999999999999875
No 111
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=43.86 E-value=41 Score=22.97 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=12.5
Q ss_pred cchhhHHHHHHHHHHhhhc
Q 033437 34 SRTKGRALEMMDKLVEGIS 52 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~ 52 (119)
....+.|+...+..++..+
T Consensus 16 ~~~~~~A~~~~~~~l~~~p 34 (272)
T 3u4t_A 16 NNNYAEAIEVFNKLEAKKY 34 (272)
T ss_dssp TTCHHHHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHHhCC
Confidence 3456677777777776544
No 112
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=43.02 E-value=26 Score=25.61 Aligned_cols=33 Identities=6% Similarity=-0.212 Sum_probs=27.8
Q ss_pred HHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcc
Q 033437 83 LLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEE 115 (119)
Q Consensus 83 ~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~ 115 (119)
.++-+|.+.+++++|.+.+.|.+++.....-|-
T Consensus 98 ~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~ 130 (177)
T 3mkq_B 98 NTFYNNSTKERSSIFAEGGSLPLAYAVAKANGD 130 (177)
T ss_dssp HHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHHCCChHHHHHHHHHcCc
Confidence 356789999999999999999999988766543
No 113
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=42.92 E-value=30 Score=21.20 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=34.1
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 36 TKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 36 tvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
..+.|+..++..++..++. ....-.+|..+..+|-...|++.|++.
T Consensus 42 ~~~~A~~~~~~al~~~p~~-------------------~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQFPNH-------------------QALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp CHHHHHHHHHHHHHHCTTC-------------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCc-------------------hHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3567777777777654322 344467999999999999999999863
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=42.59 E-value=40 Score=25.37 Aligned_cols=45 Identities=9% Similarity=-0.079 Sum_probs=34.5
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|....-..+|..+...|-...|++.|++. +.|-....||..+|+-
T Consensus 37 p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 89 (514)
T 2gw1_A 37 EDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKF 89 (514)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH
T ss_pred ccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhH
Confidence 35667778888888999999999888876 3567777777777764
No 115
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=42.13 E-value=28 Score=26.89 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=37.0
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------------------hcHHHHHHHhHhhcc
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------------------VLWDSLILQLPIGEE 115 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L--------------------emWe~vI~Cy~~l~~ 115 (119)
..=.+.-.+|..|...|-+..|.+.|+++ +-|++++.++...++
T Consensus 100 ~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~ 163 (282)
T 4f3v_A 100 SPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGK 163 (282)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGG
T ss_pred CHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhc
Confidence 44588999999999999999999999765 679999998875543
No 116
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=41.74 E-value=38 Score=26.74 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHH-----------------------hhcHHHHHHHhHhhcccC
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFED-----------------------LVLWDSLILQLPIGEESS 117 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~-----------------------LemWe~vI~Cy~~l~~~~ 117 (119)
.....+|..+...|-+..|+..|++ ...|-+...||..+|+-+
T Consensus 269 ~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 334 (457)
T 1kt0_A 269 AIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT 334 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 3556789999999999999999985 467778888888888643
No 117
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=41.40 E-value=47 Score=24.98 Aligned_cols=47 Identities=6% Similarity=-0.059 Sum_probs=37.6
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHH-------hhcHHHHHHHhHhhcccC
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFED-------LVLWDSLILQLPIGEESS 117 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~-------LemWe~vI~Cy~~l~~~~ 117 (119)
|.....-..+|..+...|-...|++.|++ ...|-....||...|+-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 287 (514)
T 2gw1_A 234 EKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDST 287 (514)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCT
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHH
Confidence 55566677889999999999999999988 466777888888877654
No 118
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=41.35 E-value=40 Score=22.16 Aligned_cols=30 Identities=10% Similarity=0.029 Sum_probs=18.8
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
|........+|..+...|-...|++.|++.
T Consensus 37 P~~~~a~~~la~~~~~~g~~~~A~~~~~~a 66 (176)
T 2r5s_A 37 QSRGDVKLAKADCLLETKQFELAQELLATI 66 (176)
T ss_dssp HTSHHHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHh
Confidence 344455566666666777777777766664
No 119
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=39.91 E-value=38 Score=24.03 Aligned_cols=39 Identities=18% Similarity=-0.021 Sum_probs=29.6
Q ss_pred HHHHHHHHhcccHHHHHHHHHH---------------hh-----cHHHHHHHhHhhccc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED---------------LV-----LWDSLILQLPIGEES 116 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~---------------Le-----mWe~vI~Cy~~l~~~ 116 (119)
...|..++..|-+.+|++.|.+ .. .|-+.-.|+..+|+-
T Consensus 15 ~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~ 73 (159)
T 2hr2_A 15 LSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF 73 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH
Confidence 5678888999999999998873 22 777777777777753
No 120
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=39.41 E-value=71 Score=21.47 Aligned_cols=64 Identities=9% Similarity=-0.063 Sum_probs=44.4
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHH
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSL 106 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~v 106 (119)
...+.|+...+..++.-+. +....--.+|..+...|-...|++.|++. ..|-..
T Consensus 21 ~~~~~A~~~~~~al~~~~~------------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 82 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNN------------------QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGK 82 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTT------------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCC------------------CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHH
Confidence 4457788888877765431 11123344899999999999999999874 456677
Q ss_pred HHHhHhhccc
Q 033437 107 ILQLPIGEES 116 (119)
Q Consensus 107 I~Cy~~l~~~ 116 (119)
..||..+|+-
T Consensus 83 ~~~~~~~~~~ 92 (228)
T 4i17_A 83 SAAYRDMKNN 92 (228)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcccH
Confidence 7777776653
No 121
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=38.87 E-value=36 Score=20.48 Aligned_cols=47 Identities=19% Similarity=0.029 Sum_probs=33.6
Q ss_pred chhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 35 RTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
...+.|...++..++..+ .....-..+|..+...|-...|++.|++.
T Consensus 33 g~~~~A~~~~~~al~~~p-------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 33 EQFDAALPHLRAALDFDP-------------------TYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp TCHHHHHHHHHHHHHHCT-------------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCC-------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345677777777776432 11223367899999999999999999874
No 122
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=38.41 E-value=64 Score=23.23 Aligned_cols=41 Identities=17% Similarity=0.021 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHhh---------------cHHHHHHHhHhhccc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDLV---------------LWDSLILQLPIGEES 116 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~Le---------------mWe~vI~Cy~~l~~~ 116 (119)
.-..+|..+...|-..+|++.|++.- .|.+...||..+|+.
T Consensus 160 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 215 (292)
T 1qqe_A 160 CFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA 215 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH
Confidence 45678999999999999999998732 367778888887764
No 123
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=38.18 E-value=59 Score=23.52 Aligned_cols=40 Identities=15% Similarity=0.026 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh--------h-cHHHHHHHhHhhcc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL--------V-LWDSLILQLPIGEE 115 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L--------e-mWe~vI~Cy~~l~~ 115 (119)
+-..+|..+...|-+..|.++|++. + .|.....++...|+
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 149 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 149 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcC
Confidence 4456677777777777777777762 3 56666666555543
No 124
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=37.92 E-value=66 Score=19.34 Aligned_cols=21 Identities=10% Similarity=0.175 Sum_probs=10.0
Q ss_pred HHHHHHHhcccHHHHHHHHHH
Q 033437 79 EYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 79 ela~~~~slG~~~sAl~ife~ 99 (119)
.+|..+...|-...|++.|++
T Consensus 54 ~l~~~~~~~g~~~~A~~~~~~ 74 (164)
T 3ro3_A 54 NLGNAYIFLGEFETASEYYKK 74 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHH
Confidence 344455555554444444443
No 125
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=36.67 E-value=43 Score=21.64 Aligned_cols=30 Identities=10% Similarity=-0.071 Sum_probs=20.2
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
|........+|..+...|-...|++.|++.
T Consensus 112 p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 141 (177)
T 2e2e_A 112 SNEITALMLLASDAFMQANYAQAIELWQKV 141 (177)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 333455566777777777777777777663
No 126
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=36.63 E-value=61 Score=24.61 Aligned_cols=42 Identities=10% Similarity=-0.041 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
...-..+|..+...|-...|++.|++. +.|-....||..+|+
T Consensus 59 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 108 (537)
T 3fp2_A 59 PVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGN 108 (537)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCC
Confidence 344566777777788888887777763 345555555555554
No 127
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.06 E-value=80 Score=23.35 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=25.2
Q ss_pred cHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 72 TIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 72 p~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
-+-.+...+|..+...|.+..|++++.++
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~ 161 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDL 161 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHH
Confidence 34567789999999999999999999875
No 128
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=35.78 E-value=59 Score=23.43 Aligned_cols=43 Identities=14% Similarity=-0.104 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHH--------------hhcHHHHHHHhHhhccc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFED--------------LVLWDSLILQLPIGEES 116 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~--------------LemWe~vI~Cy~~l~~~ 116 (119)
...-..+|..+...|-...|++.|++ ...+.....+|..+|+.
T Consensus 307 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 307 GRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 33456788888888888888887776 22355556666666654
No 129
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=34.67 E-value=43 Score=24.03 Aligned_cols=42 Identities=19% Similarity=-0.016 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------------hcHHHHHHHhHhhccc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------------VLWDSLILQLPIGEES 116 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------------emWe~vI~Cy~~l~~~ 116 (119)
..--.+|..+...|-...|++.|++- ..+-+...||..+|+.
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 252 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCc
Confidence 35568899999999999999999863 3344455566666654
No 130
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=34.37 E-value=89 Score=22.03 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=40.3
Q ss_pred HhhcCcchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 29 WESTRSRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 29 lE~~r~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
.-+....-++||+.+++++++.- ++..|-+++| .||--+..+|-+..|++.|+++
T Consensus 43 v~S~~~~~~~~gI~lLe~ll~~~-----~p~~~rd~lY------------~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 43 VRSKYNDDIRKGIVLLEELLPKG-----SKEEQRDYVF------------YLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHS-----CHHHHHHHHH------------HHHHHHHHTSCHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHhcC-----CccchHHHHH------------HHHHHHHHccCHHHHHHHHHHH
Confidence 33555668899999999999852 1223444555 4677789999999999999875
No 131
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=34.22 E-value=1.5e+02 Score=25.37 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=34.0
Q ss_pred HHhhcCcchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 28 RWESTRSRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 28 ~lE~~r~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
.+|....+-.+||-.-.+..++.+++ .|..| ..+++.+.++|-+..|-.+|++
T Consensus 477 ~lE~~~~~d~e~Ar~ife~~Lk~~p~----------------~~~~w---~~y~~fe~~~~~~~~AR~lfer 529 (679)
T 4e6h_A 477 YIEYHISKDTKTACKVLELGLKYFAT----------------DGEYI---NKYLDFLIYVNEESQVKSLFES 529 (679)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTT----------------CHHHH---HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHCCC----------------chHHH---HHHHHHHHhCCCHHHHHHHHHH
Confidence 34544444455555555555554432 12334 5888888999999999999997
No 132
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=33.89 E-value=88 Score=19.93 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
..+-..+|..+..+|-...|++.|++
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34445677777777777777776655
No 133
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=33.56 E-value=61 Score=23.32 Aligned_cols=41 Identities=10% Similarity=-0.241 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------------hcHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------------VLWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------------emWe~vI~Cy~~l~~ 115 (119)
..-..+|..+...|-...|++.|++. ..+.....||...|+
T Consensus 268 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 322 (406)
T 3sf4_A 268 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGN 322 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 34457888888888888888877662 245555666666655
No 134
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=33.53 E-value=59 Score=24.43 Aligned_cols=39 Identities=13% Similarity=-0.022 Sum_probs=29.7
Q ss_pred HHHHHHHHhcccHHHHHHHHHH-hh----------------cHHHHHHHhHhhccc
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED-LV----------------LWDSLILQLPIGEES 116 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~-Le----------------mWe~vI~Cy~~l~~~ 116 (119)
..||..+...|-..+|++.|++ ++ .|-+...+|..+|+-
T Consensus 55 n~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~ 110 (472)
T 4g1t_A 55 NLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRL 110 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCCh
Confidence 5689999999999999999875 22 366677777777753
No 135
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=33.51 E-value=29 Score=28.46 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHhhcHHHHHHHhHhh
Q 033437 88 GLIGEAIKNFEDLVLWDSLILQLPIG 113 (119)
Q Consensus 88 G~~~sAl~ife~LemWe~vI~Cy~~l 113 (119)
+++..|++.|++=++||.+|.||..+
T Consensus 93 ~L~~~~i~~f~kg~~~E~ai~l~k~L 118 (436)
T 2yin_A 93 TLYETIIGYFDKGKMWEEAISLCKEL 118 (436)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 44788999999999999999999875
No 136
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=33.49 E-value=86 Score=20.21 Aligned_cols=48 Identities=21% Similarity=0.207 Sum_probs=34.2
Q ss_pred cchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHH-HHHHHhhc
Q 033437 34 SRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAI-KNFEDLVL 102 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl-~ife~Lem 102 (119)
.+|+-.|+-++|+.|++-.. .|..-...+=-..|.+.|-+ |||.||+-
T Consensus 25 ~~tts~AL~kiQdVVN~q~~---------------------aL~~L~~qL~~NFgAISssi~dIy~RLd~ 73 (77)
T 2bez_C 25 LTTTSTALGKLQDVVNQNAQ---------------------ALNTLVKQLSSNFGAISSVLNDILSRLDK 73 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 45888999999999986541 23344555556678888776 79999863
No 137
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=33.05 E-value=41 Score=21.11 Aligned_cols=24 Identities=8% Similarity=-0.038 Sum_probs=20.9
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHh
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife~L 100 (119)
.-.+|..+...|-...|++.|++.
T Consensus 88 ~~~la~~~~~~g~~~~A~~~~~~a 111 (121)
T 1hxi_A 88 HAALAVSHTNEHNANAALASLRAW 111 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 367899999999999999999874
No 138
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=32.55 E-value=80 Score=25.05 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=14.1
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
.......+|..+...|-..+|++.|++
T Consensus 90 ~~~~~~~la~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344444555555555555555555554
No 139
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=32.52 E-value=1e+02 Score=21.09 Aligned_cols=23 Identities=22% Similarity=0.164 Sum_probs=11.2
Q ss_pred HHHHHHHHHhcccHHHHHHHHHH
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife~ 99 (119)
-..+|..+...|-...|++.|++
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~ 108 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQR 108 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHH
Confidence 34444444555555555555544
No 140
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=32.33 E-value=29 Score=23.40 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=24.7
Q ss_pred CcchhhHHHHHHHHHHhhhcCCCCCcccch
Q 033437 33 RSRTKGRALEMMDKLVEGISNSSPGVTQRI 62 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~~~~~~~~~~Rl 62 (119)
...+.|-|+.+|+.+|.++.+++.+..+=+
T Consensus 28 ~~~sFEeal~eLEeIV~~LE~gel~LEesl 57 (100)
T 1vp7_A 28 LPQDFETALAELESLVSAMENGTLPLEQSL 57 (100)
T ss_dssp BCCSHHHHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 346899999999999999999887765444
No 141
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=32.07 E-value=26 Score=23.07 Aligned_cols=29 Identities=17% Similarity=0.088 Sum_probs=20.6
Q ss_pred cchhhHHHHHHHHHHhhhcC--CCCCcccch
Q 033437 34 SRTKGRALEMMDKLVEGISN--SSPGVTQRI 62 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~~--~~~~~~~Rl 62 (119)
-|.+|+++...++|++|+.- ...|+..|-
T Consensus 40 i~~ie~~l~EA~ell~qMelE~r~~p~~~R~ 70 (102)
T 1vcs_A 40 VANVEKQLEEARELLEQMDLEVREIPPQSRG 70 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHhHH
Confidence 46799999999999999752 233444444
No 142
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.01 E-value=25 Score=28.08 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHhh
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDLV 101 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~Le 101 (119)
....+|+.+.++|-...|+++|.++.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~ 158 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSL 158 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34789999999999999999997654
No 143
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=31.74 E-value=77 Score=23.69 Aligned_cols=42 Identities=7% Similarity=-0.074 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
..--.+|..+..+|-...|++.|++. +.|.+...||..+|+.
T Consensus 231 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 231 KGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 34456777777788888887777763 4566677777666653
No 144
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=31.73 E-value=33 Score=25.88 Aligned_cols=44 Identities=16% Similarity=0.047 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHH-h------------------------hcHHHHHHHhHhhcccC
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFED-L------------------------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~-L------------------------emWe~vI~Cy~~l~~~~ 117 (119)
-....++|..+...|-+..|+..|++ + ..|-+...||..+|+-+
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~ 247 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYD 247 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 34456788888899999999999987 3 26778888888887643
No 145
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=31.33 E-value=64 Score=26.01 Aligned_cols=22 Identities=32% Similarity=0.554 Sum_probs=19.6
Q ss_pred CcchhhHHHHHHHHHHhhhcCC
Q 033437 33 RSRTKGRALEMMDKLVEGISNS 54 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~~~~ 54 (119)
..||++|+...||.||++..++
T Consensus 7 ~~r~~~~~~kll~~l~~lC~~p 28 (323)
T 3op0_A 7 EARALGRAVRMLQRLEEQCVDP 28 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCT
T ss_pred cchHHHHHHHHHHHHHHHhCCC
Confidence 4699999999999999998764
No 146
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=31.28 E-value=76 Score=26.46 Aligned_cols=47 Identities=15% Similarity=-0.042 Sum_probs=34.6
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcccC
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~~ 117 (119)
|..|...-.+|..+...|-...|++.|++. +.|-+...||..+|+-+
T Consensus 464 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~ 518 (681)
T 2pzi_A 464 GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTD 518 (681)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCC
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChH
Confidence 556677777888888888888888888773 45777777777777643
No 147
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=30.60 E-value=1.1e+02 Score=22.11 Aligned_cols=31 Identities=13% Similarity=-0.052 Sum_probs=26.7
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
-|..+..--.+|..+..+|-..+|++.|++.
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 98 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRA 98 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4667788889999999999999999999873
No 148
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=30.24 E-value=2e+02 Score=23.24 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=18.3
Q ss_pred HHHHHHHhcccHHHHHHHHHHhh---------cHHHHHHHhHhhcc
Q 033437 79 EYAKLLVSCGLIGEAIKNFEDLV---------LWDSLILQLPIGEE 115 (119)
Q Consensus 79 ela~~~~slG~~~sAl~ife~Le---------mWe~vI~Cy~~l~~ 115 (119)
-+-.-+...|.+..|+++|+++. .|.-+|..|...|+
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~ 155 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGD 155 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCC
Confidence 34444555555555555555432 34455555554443
No 149
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=30.11 E-value=1.6e+02 Score=22.38 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=49.2
Q ss_pred CcchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 33 RSRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
+.+.--.|+.-+++++..=-+.+|.+.-|+.-||--+ -..=-....+|.++.-.|-.++|+.-|.+
T Consensus 74 klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~-~DkEfFy~l~a~lltq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 74 KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDP-GDEEFFESLLGDLCTLSGYREEGIGHYVR 139 (242)
T ss_dssp HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCT-TCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccCcccccccceeeecc-chHHHHHHHHHHHHHHhcCHHHhhhHhhh
Confidence 3445557888899998777778899999998777442 12222446689999999999999988764
No 150
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=29.39 E-value=88 Score=21.39 Aligned_cols=42 Identities=12% Similarity=-0.018 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHhh--------------cHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDLV--------------LWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~Le--------------mWe~vI~Cy~~l~~ 115 (119)
-..-..+|..+...|-...|++.|++.- .|.....+|...|+
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 238 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 238 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC
Confidence 3455678888888888888888887642 45555555555554
No 151
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=28.83 E-value=1.1e+02 Score=22.05 Aligned_cols=41 Identities=17% Similarity=0.078 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHhh--------------cHHHHHHHhHhhcc
Q 033437 75 ALRKEYAKLLVSCGLIGEAIKNFEDLV--------------LWDSLILQLPIGEE 115 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl~ife~Le--------------mWe~vI~Cy~~l~~ 115 (119)
..-..+|..+..+|-...|++.|++.- .+-..+.||..+|+
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 210 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRAD 210 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCC
Confidence 345678999999999988888887631 34455566666554
No 152
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=28.49 E-value=99 Score=23.40 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=23.8
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|.....-..+|..+...|-...|++.|++. +.|-....||...|+
T Consensus 307 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 359 (537)
T 3fp2_A 307 PEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGK 359 (537)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 334444555666666666666666665542 444455555544443
No 153
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=28.42 E-value=89 Score=24.01 Aligned_cols=40 Identities=10% Similarity=-0.091 Sum_probs=31.1
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHh------------------------hcHHHHHHHhHhhccc
Q 033437 77 RKEYAKLLVSCGLIGEAIKNFEDL------------------------VLWDSLILQLPIGEES 116 (119)
Q Consensus 77 ~~ela~~~~slG~~~sAl~ife~L------------------------emWe~vI~Cy~~l~~~ 116 (119)
-..+|..+...|-...|++.|++. ..|-+...||..+|+-
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 289 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDW 289 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCH
Confidence 467899999999999999988764 3466777777777763
No 154
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=27.94 E-value=94 Score=24.63 Aligned_cols=46 Identities=13% Similarity=-0.032 Sum_probs=32.1
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|........+|..+...|-..+|++.|++. +.|-+...||..+|+.
T Consensus 54 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 107 (568)
T 2vsy_A 54 PGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQA 107 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Confidence 444566677777777788888888777774 4566677777766654
No 155
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=26.84 E-value=69 Score=24.66 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh-----------hcHHHHHHHhHhhcccC
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL-----------VLWDSLILQLPIGEESS 117 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L-----------emWe~vI~Cy~~l~~~~ 117 (119)
..--+|..+..+|...+|++.|++- +.+-....|+..+|+.+
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH
Confidence 4566788888899999999888866 35555667777777653
No 156
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=25.55 E-value=1.1e+02 Score=22.44 Aligned_cols=43 Identities=12% Similarity=0.070 Sum_probs=30.6
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHHh-------h-------cHHHHHHHhHhhcc
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFEDL-------V-------LWDSLILQLPIGEE 115 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~L-------e-------mWe~vI~Cy~~l~~ 115 (119)
.-.....+|..+..+|-...|++.|++- + .+-+...||...|+
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~ 239 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ 239 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC
Confidence 3455677889999999998888877653 2 45666666666665
No 157
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=25.49 E-value=35 Score=27.60 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=19.7
Q ss_pred CcchhhHHHHHHHHHHhhhcCC
Q 033437 33 RSRTKGRALEMMDKLVEGISNS 54 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~~~~ 54 (119)
-.||+||+...||.+|++..++
T Consensus 30 D~r~l~k~~k~mdkv~klCq~p 51 (329)
T 3bux_B 30 DKKMVEKCWKLMDKVVRLCQNP 51 (329)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCG
T ss_pred cHHHHHHHHHHHHHHHHHhcCC
Confidence 5799999999999999998764
No 158
>1g2y_A Hepatocyte nuclear factor 1-alpha; dimerization domain, four-helix bundle, transcription factor, selenomethionine; 1.00A {Synthetic} SCOP: a.34.2.1 PDB: 1g39_A 1f93_E 1g2z_A 1jb6_A 2gyp_A
Probab=25.11 E-value=60 Score=17.60 Aligned_cols=20 Identities=35% Similarity=0.478 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhcccHHHHH
Q 033437 75 ALRKEYAKLLVSCGLIGEAI 94 (119)
Q Consensus 75 ~l~~ela~~~~slG~~~sAl 94 (119)
.+++||-.-+..-|..|++|
T Consensus 7 ~LQ~eLL~aLL~SGlsKe~L 26 (32)
T 1g2y_A 7 QLQTEMLAALLESGLSKEAL 26 (32)
T ss_dssp HHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHH
Confidence 57889888888889999986
No 159
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=24.82 E-value=25 Score=23.26 Aligned_cols=19 Identities=5% Similarity=0.067 Sum_probs=16.9
Q ss_pred cchhhHHHHHHHHHHhhhc
Q 033437 34 SRTKGRALEMMDKLVEGIS 52 (119)
Q Consensus 34 ~rtvERa~lQmq~LVd~~~ 52 (119)
-|.+|+++.+.++|++|+.
T Consensus 51 i~~ie~~ldEA~eLl~qMe 69 (102)
T 2qyw_A 51 VRDFDEKQQEANETLAEME 69 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4779999999999999975
No 160
>1qxo_A Chorismate synthase; beta-alpha-beta, flavoprotein, shikimate, anti-infective, lyase; HET: FMN EPS; 2.00A {Streptococcus pneumoniae} SCOP: d.258.1.1
Probab=24.67 E-value=31 Score=28.48 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=41.8
Q ss_pred HHHhhcCcchhh-HHHHHHHHHHhhhcCCCCCcccchhhhhhcCC------CcHhH--HHHHHHHHHHhcccHH
Q 033437 27 IRWESTRSRTKG-RALEMMDKLVEGISNSSPGVTQRIPFCYVICI------PTIPA--LRKEYAKLLVSCGLIG 91 (119)
Q Consensus 27 s~lE~~r~rtvE-Ra~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~------pp~W~--l~~ela~~~~slG~~~ 91 (119)
...|.+-.|... -+..+|.+++|+..+..-+...-.+ +...++ |-.|. |+..||..+||++.+|
T Consensus 182 ~~~~~~~~~cpd~~~~~~m~~~I~~ak~~GDS~GGvve-vv~~gvP~GLG~pvf~d~kLda~LA~AlmSI~AvK 254 (388)
T 1qxo_A 182 QRAAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVE-TVVGGVPVGLGSYVQWDRKLDARLAQAVVSINAFK 254 (388)
T ss_dssp HHHHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEE-EEEESCCTTCSCSSSGGGCHHHHHHHHHHTSTTEE
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEE-EEEecCCCCcCCcccccccchHHHHHHhcCcCcee
Confidence 445666556543 3467899999998765544433332 223333 44555 9999999999999876
No 161
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=24.64 E-value=1.2e+02 Score=18.02 Aligned_cols=49 Identities=12% Similarity=-0.010 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 36 TKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 36 tvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
..+.|....+.+++..++.. ......-.+|..+...|-...|++.|+++
T Consensus 54 ~~~~A~~~~~~~~~~~p~~~----------------~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 102 (129)
T 2xev_A 54 NFQLAEAQFRDLVSRYPTHD----------------KAAGGLLKLGLSQYGEGKNTEAQQTLQQV 102 (129)
T ss_dssp CHHHHHHHHHHHHHHCTTST----------------THHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCCc----------------ccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 35667777777776544321 12334456789999999999999998875
No 162
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=24.36 E-value=36 Score=20.47 Aligned_cols=19 Identities=16% Similarity=0.149 Sum_probs=15.3
Q ss_pred CcchhhHHHHHHHHHHhhh
Q 033437 33 RSRTKGRALEMMDKLVEGI 51 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~ 51 (119)
+.-|+|-|++||+.+=..|
T Consensus 11 kpmsveEAv~qmel~gh~F 29 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSF 29 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHhCCCcE
Confidence 4568999999999886655
No 163
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=24.17 E-value=1.6e+02 Score=19.55 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=26.4
Q ss_pred CCcHhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 70 IPTIPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 70 ~pp~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
.|........+|..+...|-...|++.|++
T Consensus 248 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 277 (283)
T 3edt_B 248 SPTVNTTLRSLGALYRRQGKLEAAHTLEDC 277 (283)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 466777888999999999999999999986
No 164
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=24.08 E-value=1.1e+02 Score=21.66 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHh---------------hcHHHHHHHhHhhcc
Q 033437 76 LRKEYAKLLVSCGLIGEAIKNFEDL---------------VLWDSLILQLPIGEE 115 (119)
Q Consensus 76 l~~ela~~~~slG~~~sAl~ife~L---------------emWe~vI~Cy~~l~~ 115 (119)
.-..+|..+...|-...|++.|++. ..+-+...+|..+|+
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~ 211 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR 211 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhh
Confidence 4467899999999999998888763 244555566666554
No 165
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=24.03 E-value=2.2e+02 Score=20.92 Aligned_cols=35 Identities=11% Similarity=-0.074 Sum_probs=19.9
Q ss_pred HHHHHHHHhccc---HHHHHHHHHHhhcHHHHHHHhHh
Q 033437 78 KEYAKLLVSCGL---IGEAIKNFEDLVLWDSLILQLPI 112 (119)
Q Consensus 78 ~ela~~~~slG~---~~sAl~ife~LemWe~vI~Cy~~ 112 (119)
..++..+...|- +..|+++|++.+.|.++...+..
T Consensus 304 ~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 341 (378)
T 3q15_A 304 LFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARS 341 (378)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 344555555555 66666666666666555444433
No 166
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=23.63 E-value=37 Score=21.07 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=15.4
Q ss_pred CcchhhHHHHHHHHHHhhh
Q 033437 33 RSRTKGRALEMMDKLVEGI 51 (119)
Q Consensus 33 r~rtvERa~lQmq~LVd~~ 51 (119)
+.-|+|-|++||+.+=..|
T Consensus 11 kpMsveEAv~qmel~gh~F 29 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNF 29 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHhCCCcE
Confidence 4568999999999886655
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=23.56 E-value=1.4e+02 Score=23.68 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=15.1
Q ss_pred HhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 73 IPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 73 ~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
....-..+|..+..+|-..+|++.|++
T Consensus 73 ~~~~~~~lg~~~~~~g~~~eA~~~~~~ 99 (477)
T 1wao_1 73 YIKGYYRRAASNMALGKFRAALRDYET 99 (477)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 334444555566666666666666555
No 168
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=23.11 E-value=1.3e+02 Score=25.75 Aligned_cols=45 Identities=18% Similarity=0.277 Sum_probs=25.5
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
|-.......||..|...|-..+|++.|++. +.|-+...+|..+|+
T Consensus 40 P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~ 92 (723)
T 4gyw_A 40 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 92 (723)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 333444556666666666666666666652 345555555555554
No 169
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=22.75 E-value=1e+02 Score=22.35 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=37.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHhhcHHHHHHHhHhhcccC
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDLVLWDSLILQLPIGEESS 117 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~LemWe~vI~Cy~~l~~~~ 117 (119)
+..| +.||+.-++-|-+.=|-..|.+++-++.+-.=|...|+.+
T Consensus 34 ~~~W---k~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e 77 (177)
T 3mkq_B 34 SITW---ERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVN 77 (177)
T ss_dssp HHHH---HHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHH
T ss_pred HHHH---HHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHH
Confidence 4566 7889999999999999999999999999987777777643
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=22.64 E-value=1.4e+02 Score=21.72 Aligned_cols=42 Identities=10% Similarity=-0.068 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHhh--------------cHHHHHHHhHhhcc
Q 033437 74 PALRKEYAKLLVSCGLIGEAIKNFEDLV--------------LWDSLILQLPIGEE 115 (119)
Q Consensus 74 W~l~~ela~~~~slG~~~sAl~ife~Le--------------mWe~vI~Cy~~l~~ 115 (119)
...-..+|..+...|-...|++.|++.- .+.....+|...|+
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 278 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQ 278 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcC
Confidence 3455678888888888888888776641 45556666666554
No 171
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=22.47 E-value=1.1e+02 Score=20.92 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=38.9
Q ss_pred hcCcchhhHHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHHh
Q 033437 31 STRSRTKGRALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 31 ~~r~rtvERa~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~L 100 (119)
+.....+.||+.-|++|++. +.|...| .++| -||--+..+|-+..|+..++.+
T Consensus 48 S~~~~d~~~GI~lLe~l~~~----~~p~~~R-d~lY------------~LAvg~yklg~Y~~A~~~~~~l 100 (126)
T 1nzn_A 48 TRYNDDIRKGIVLLEELLPK----GSKEEQR-DYVF------------YLAVGNYRLKEYEKALKYVRGL 100 (126)
T ss_dssp SSSHHHHHHHHHHHHHHTTT----SCHHHHH-HHHH------------HHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc----CCcchHH-HHHH------------HHHHHHHHhhhHHHHHHHHHHH
Confidence 56677888999999999974 2122334 4444 3788889999999999888764
No 172
>1ezj_A Nucleocapsid phosphoprotein; four stranded coiled coil, viral polymerase, T viral protein, transferase; 1.90A {Sendai virus} SCOP: h.1.14.1
Probab=22.36 E-value=28 Score=23.87 Aligned_cols=18 Identities=50% Similarity=0.576 Sum_probs=16.0
Q ss_pred HHHHHHHHhcccHHHHHH
Q 033437 78 KEYAKLLVSCGLIGEAIK 95 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ 95 (119)
+|.|.++.|+|.++||-+
T Consensus 8 ~e~~tLL~sLGViqS~~e 25 (115)
T 1ezj_A 8 KEMATLLTSLGVIQSAQE 25 (115)
T ss_dssp HHHHHHHHHTTSSSCHHH
T ss_pred HHHHHHHHHHhHHHHHHH
Confidence 688999999999999864
No 173
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=21.75 E-value=33 Score=27.90 Aligned_cols=25 Identities=4% Similarity=-0.001 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHhhcHHHHHHHhHhh
Q 033437 89 LIGEAIKNFEDLVLWDSLILQLPIG 113 (119)
Q Consensus 89 ~~~sAl~ife~LemWe~vI~Cy~~l 113 (119)
.+..|.+.|++=++||.+|.+|..+
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L 114 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLI 114 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTT
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 6788999999999999999988765
No 174
>1rw2_A ATP-dependent DNA helicase II, 80 kDa subunit; KU80, NHEJ, structure, DNA-PK, DNA binding protein; NMR {Homo sapiens} SCOP: a.118.19.1
Probab=21.23 E-value=2.2e+02 Score=20.07 Aligned_cols=20 Identities=10% Similarity=0.062 Sum_probs=16.5
Q ss_pred chhhHHHHHHHHHHhhhcCC
Q 033437 35 RTKGRALEMMDKLVEGISNS 54 (119)
Q Consensus 35 rtvERa~lQmq~LVd~~~~~ 54 (119)
-+++.|+.||++.|.++-..
T Consensus 49 ~~~~~A~~qM~~vI~~Ll~~ 68 (152)
T 1rw2_A 49 ASFEEASNQLINHIEQFLDT 68 (152)
T ss_dssp SCHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 35999999999999887543
No 175
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=21.04 E-value=1.3e+02 Score=23.54 Aligned_cols=45 Identities=20% Similarity=0.088 Sum_probs=0.0
Q ss_pred C---cHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhcc
Q 033437 71 P---TIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEE 115 (119)
Q Consensus 71 p---p~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~ 115 (119)
| .....-..+|..+...|-...|++.|++. +.|.....+|..+|+
T Consensus 252 p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 252 RKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
No 176
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=20.84 E-value=1.5e+02 Score=21.25 Aligned_cols=23 Identities=26% Similarity=0.185 Sum_probs=13.0
Q ss_pred HHHHHHHHhcccHHHHHHHHHHh
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDL 100 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~L 100 (119)
..+|..+..+|-..+|++.|++-
T Consensus 81 ~~lg~~~~~~g~~~~A~~~~~~A 103 (292)
T 1qqe_A 81 VEAYKCFKSGGNSVNAVDSLENA 103 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHH
Confidence 45555555556666665555544
No 177
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=20.83 E-value=2.5e+02 Score=20.48 Aligned_cols=37 Identities=16% Similarity=-0.057 Sum_probs=26.7
Q ss_pred HHHHHHHHhccc---HHHHHHHHHHhhcHHHHHHHhHhhc
Q 033437 78 KEYAKLLVSCGL---IGEAIKNFEDLVLWDSLILQLPIGE 114 (119)
Q Consensus 78 ~ela~~~~slG~---~~sAl~ife~LemWe~vI~Cy~~l~ 114 (119)
.-+|..+...|- +..|+++|++.+.+.+....+..+|
T Consensus 307 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la 346 (383)
T 3ulq_A 307 EFLKSLYLSGPDEEAIQGFFDFLESKMLYADLEDFAIDVA 346 (383)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 347777778777 8888888888887777666655544
No 178
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=20.80 E-value=1.6e+02 Score=25.27 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=38.0
Q ss_pred CcHhHHHHHHHHHHHhcccHHHHHHHHHHh--------hcHHHHHHHhHhhccc
Q 033437 71 PTIPALRKEYAKLLVSCGLIGEAIKNFEDL--------VLWDSLILQLPIGEES 116 (119)
Q Consensus 71 pp~W~l~~ela~~~~slG~~~sAl~ife~L--------emWe~vI~Cy~~l~~~ 116 (119)
|.....-..+|..+..+|-..+|++.|++. +.|-+...+|..+|+-
T Consensus 74 P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 74 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 555677788999999999999999999983 5677888888887764
No 179
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=20.54 E-value=2e+02 Score=19.24 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=13.0
Q ss_pred HHHHHHHHhcccHHHHHHHHHH
Q 033437 78 KEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~ 99 (119)
..+|..+...|-...|++.|++
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~ 102 (275)
T 1xnf_A 81 NYLGIYLTQAGNFDAAYEAFDS 102 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHH
Confidence 4456666666666666665554
No 180
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.52 E-value=1.4e+02 Score=18.39 Aligned_cols=24 Identities=21% Similarity=-0.006 Sum_probs=20.5
Q ss_pred HHHHHHHHhcccHHHHHHHHHHhh
Q 033437 78 KEYAKLLVSCGLIGEAIKNFEDLV 101 (119)
Q Consensus 78 ~ela~~~~slG~~~sAl~ife~Le 101 (119)
--+|..++.-|-...|++.|+++-
T Consensus 47 ~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 47 SLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345999999999999999999863
No 181
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=20.04 E-value=1.2e+02 Score=21.51 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=27.1
Q ss_pred cccchhhhhhcCCCcHhHHHHHHHHHHHhcccHHHHHHHHHH
Q 033437 58 VTQRIPFCYVICIPTIPALRKEYAKLLVSCGLIGEAIKNFED 99 (119)
Q Consensus 58 ~~~Rl~~~~~~~~pp~W~l~~ela~~~~slG~~~sAl~ife~ 99 (119)
...++..|| .++|..+-+.|..+.|-+||..
T Consensus 96 IG~~~AlfY-----------e~wA~~lE~~g~~~~A~~Vy~~ 126 (152)
T 4a1g_A 96 IGTLSSPLY-----------IAWAGHLEAQGELQHASAVLQR 126 (152)
T ss_dssp TTTTBHHHH-----------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcHHHHHHH-----------HHHHHHHHHcCCHHHHHHHHHH
Confidence 456777888 8999999999999999999974
No 182
>1sq1_A Chorismate synthase; structural genomics, bifunctional alpha/beta tetrameric PROT protein structure initiative; 2.80A {Campylobacter jejuni} SCOP: d.258.1.1
Probab=20.03 E-value=32 Score=28.28 Aligned_cols=63 Identities=11% Similarity=-0.023 Sum_probs=39.2
Q ss_pred HHhhcCcchhh-HHHHHHHHHHhhhcCCCCCcccchhhhhhcCCCcH------hHHHHHHHHHHHhcccHH
Q 033437 28 RWESTRSRTKG-RALEMMDKLVEGISNSSPGVTQRIPFCYVICIPTI------PALRKEYAKLLVSCGLIG 91 (119)
Q Consensus 28 ~lE~~r~rtvE-Ra~lQmq~LVd~~~~~~~~~~~Rl~~~~~~~~pp~------W~l~~ela~~~~slG~~~ 91 (119)
..|.+-.|..+ -+..+|.+++|+..+..-+.....+ +...++|+- =.|+..||..|||++.+|
T Consensus 172 ~~~~~~~~cpd~~~~~~m~~~I~~~k~~gDS~GGvve-~v~~gvP~GLG~pvfdkLda~LA~AlmSI~AvK 241 (370)
T 1sq1_A 172 FAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVF-TKVSGMLIGLGEVLYDKLDSKLAHALMGINAVK 241 (370)
T ss_dssp HHHHSTTCBSCTTTHHHHHHHHHHHHHTTCCCCEEEE-EEEESCCBSCSBTTTBCHHHHHHHHHHTSTTEE
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEE-EEEEcCCCCCCCcccccchHHHHHHhcCcccee
Confidence 34555555443 3467888999988765433333221 223344443 379999999999999875
Done!