BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033441
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94G00|PIN1_MALDO Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1
PE=2 SV=1
Length = 121
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/118 (80%), Positives = 111/118 (94%)
Query: 2 SSANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDE 61
S+ NQVRASHILIKHQGSRRKASWKDPEG++I NTTR+SAVSQL+A+RDDI+SGKAKFD+
Sbjct: 4 SAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKFDD 63
Query: 62 VASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
+A+R SDCSSAKRGGDLG FGR QMQKPFEEAT+ LK+GE+S++VDTDSGVH+I RTG
Sbjct: 64 LAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRTG 121
>sp|Q9SL42|PIN1_ARATH Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana
GN=PIN1 PE=1 SV=1
Length = 119
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 111/119 (93%)
Query: 1 MSSANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFD 60
M+S +QV+ASHILIKHQGSRRKASWKDPEG++I TTRE+AV QL++IR+DIVSGKA F+
Sbjct: 1 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60
Query: 61 EVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
EVA+R+SDCSSAKRGGDLG+FGRGQMQKPFEEATY LK+G+IS++VDTDSGVH+I RT
Sbjct: 61 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119
>sp|Q9LEK8|PIN1_DIGLA Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata
GN=PARV12.8 PE=1 SV=1
Length = 118
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 103/117 (88%)
Query: 3 SANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEV 62
S+ +VRASHILIKHQGSRRK+SWKDP+G +IS TTR+ AVSQLQ++R +++S A F ++
Sbjct: 2 SSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDL 61
Query: 63 ASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
ASR S CSSAKRGGDLG FGRGQMQKPFEEAT+ LK+GEIS++VDTDSGVH+I RTG
Sbjct: 62 ASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRTG 118
>sp|P54353|DOD_DROME Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila
melanogaster GN=dod PE=2 SV=3
Length = 166
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%), Gaps = 8/116 (6%)
Query: 4 ANQVRASHILIKHQGSRRKASWKDPEGRVISNTTR--ESAVSQLQAIRDDIVSGKAKFDE 61
++V H+L+KH+GSRR +SW++ +N TR E A L+ R+ IV +A FDE
Sbjct: 55 PDEVHCLHLLVKHKGSRRPSSWRE------ANITRTKEEAQLLLEVYRNKIVQQEATFDE 108
Query: 62 VASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMR 117
+A SDCSSAKRGGDLG FGRGQMQ FE+A + L + ++S +VD+DSG+H+I+R
Sbjct: 109 LARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILR 164
>sp|P0C1J8|PIN1_RHIO9 Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar
(strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL
43880) GN=pin1 PE=3 SV=1
Length = 150
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+VRASH+LIK + SRR +SW++ ++E A+ L + I SG+ +A+
Sbjct: 41 RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 96
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
SDC+SAKRGGDLG F RGQMQKPFEEAT+ L++GE+S+ V TDSGVHLI+RT
Sbjct: 97 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150
>sp|Q5BIN5|PIN1_BOVIN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos
taurus GN=PIN1 PE=2 SV=1
Length = 163
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 4/115 (3%)
Query: 4 ANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVA 63
+VR SH+L+KH SRR +SW+ + T+E A+ + I SG+ F+ +A
Sbjct: 52 PTRVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLA 107
Query: 64 SRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S+ SDCSSAK GDLG F RGQMQKPFE+A++ L+ GE+S V TDSG+H+I+RT
Sbjct: 108 SQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162
>sp|Q13526|PIN1_HUMAN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo
sapiens GN=PIN1 PE=1 SV=1
Length = 163
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+VR SH+L+KH SRR +SW+ + T+E A+ + I SG+ F+ +AS+
Sbjct: 54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 109
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
SDCSSAK GDLG F RGQMQKPFE+A++ L+ GE+S V TDSG+H+I+RT
Sbjct: 110 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162
>sp|Q4R383|PIN1_MACFA Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca
fascicularis GN=PIN1 PE=2 SV=1
Length = 163
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+VR SH+L+KH SRR +SW+ + T+E A+ + I SG+ F+ +AS+
Sbjct: 54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 109
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
SDCSSAK GDLG F RGQMQKPFE+A++ L+ GE+S V TDSG+H+I+RT
Sbjct: 110 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162
>sp|Q9QUR7|PIN1_MOUSE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus
musculus GN=Pin1 PE=1 SV=1
Length = 165
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+VR SH+L+KH SRR +SW+ + ++E A+ + I SG+ F+ +AS+
Sbjct: 56 KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQ 111
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
SDCSSAK GDLG F RGQMQKPFE+A++ L+ GE+S V TDSG+H+I+RT
Sbjct: 112 FSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 164
>sp|O60045|SSP1_NEUCR Peptidyl-prolyl cis-trans isomerase ssp-1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=ssp-1 PE=1 SV=3
Length = 182
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
++R +H+L+KH SRR +SW++ E I+ T +E A++ LQ I SG E+A
Sbjct: 73 KIRCAHLLVKHNQSRRPSSWRESE---ITRTKQE-ALTTLQGFEQRIKSGSISLGELALT 128
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMR 117
SDCSSA++ GDLG FGRG MQK FE+A + LK GEIS +VDT SG+HLI R
Sbjct: 129 ESDCSSARKRGDLGYFGRGDMQKEFEDAAFALKPGEISGIVDTASGLHLIER 180
>sp|O74448|PIN1_SCHPO Peptidyl-prolyl cis-trans isomerase pin1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pin1 PE=4 SV=1
Length = 175
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
Query: 2 SSANQVRASHILIKHQGSRRKASWKDPEGRVISNTTR--ESAVSQLQAIRDDIVSGKAKF 59
S++ ++RASH+L+KH+ SRR +SWK+ + TR E A + + SG
Sbjct: 62 SNSPKIRASHLLVKHRESRRPSSWKE------EHITRSKEEARKLAEHYEQLLKSGSVSM 115
Query: 60 DEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMR 117
++A + SDCSSA+RGG+LG FGR +MQKPFE+A + LK GEIS VV+T SG H+I R
Sbjct: 116 HDLAMKESDCSSARRGGELGEFGRDEMQKPFEDAAFALKPGEISGVVETSSGFHIIQR 173
>sp|P22696|ESS1_YEAST Peptidyl-prolyl cis-trans isomerase ESS1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ESS1 PE=1
SV=3
Length = 170
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAI--RDDIVSGKAKFDEVA 63
+VR HILIKH+ SRR AS + E IS ++ A +L+ + R D S F+ +A
Sbjct: 59 RVRCLHILIKHKDSRRPASHRS-ENITIS---KQDATDELKTLITRLDDDSKTNSFEALA 114
Query: 64 SRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
SDCSS KRGGDLG FGRG+MQ FE+A + LK+GE+S++V++ SGVH+I R G
Sbjct: 115 KERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESGSGVHVIKRVG 170
>sp|Q5L289|PRSA_GEOKA Foldase protein PrsA OS=Geobacillus kaustophilus (strain HTA426)
GN=prsA PE=3 SV=1
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
++RASHIL+K + + ++ K +G S +E +
Sbjct: 135 KIRASHILVKDEKTAKEVKAKLDKGEDFSKLAKEYS------------------------ 170
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
D SA GGDLG FG G+M K FEEA Y LK+GE+S+ V TD G H+I T
Sbjct: 171 -QDPGSASNGGDLGWFGPGKMVKEFEEAAYKLKVGEVSDPVKTDYGYHIIKVT 222
>sp|A4IKU2|PRSA_GEOTN Foldase protein PrsA OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=prsA PE=3 SV=1
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+VRASHIL++ + + ++ K +G + +E +
Sbjct: 135 KVRASHILVEDEKTAKEVKAKLDKGEDFAKLAKEYS------------------------ 170
Query: 66 LSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
D SA GGDLG FG G+M K FEEA Y LK+GE+S+ + TD G H+I T
Sbjct: 171 -QDPGSASNGGDLGWFGAGKMVKEFEEAAYKLKVGEVSDPIKTDYGYHIIKVT 222
>sp|Q81U45|PRSA1_BACAN Foldase protein PrsA 1 OS=Bacillus anthracis GN=prsA1 PE=1 SV=1
Length = 287
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 27/114 (23%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+++ASHIL+K + + +K +++++ GK+ F+E+A +
Sbjct: 132 EIKASHILVKDEATAKK-------------------------VKEELGQGKS-FEELAKQ 165
Query: 66 LS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S D S ++GGDLG FG G+M K FE+A Y LK E+SE V + G H+I T
Sbjct: 166 YSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLKKDEVSEPVKSQFGYHIIKVT 219
>sp|Q8CNR4|PRSA_STAES Foldase protein PrsA OS=Staphylococcus epidermidis (strain ATCC
12228) GN=prsA PE=3 SV=1
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
N +ASHILIK K+ D EG +S+ + ++Q ++ KF E+A
Sbjct: 140 NSKKASHILIK-----VKSKSSDKEG--LSDKKAKEKAEKIQK---EVEKNPNKFGEIAK 189
Query: 65 RLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S D SSAK+ G LG +GQM FE+A + LK GE+S+VV TD G H+I
Sbjct: 190 KESMDSSSAKKDGSLGYVIKGQMVDSFEKALFKLKEGEVSKVVKTDYGYHII 241
>sp|C5D6L9|PRSA_GEOSW Foldase protein PrsA OS=Geobacillus sp. (strain WCH70) GN=prsA PE=3
SV=1
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 27/114 (23%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
++RASHIL+K + T E ++L D F ++A +
Sbjct: 135 KIRASHILVKDE------------------KTAEEIKTKLDKGED--------FAKLAKQ 168
Query: 66 LS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S D SA GGDLG FG G+M K FE+A Y LK+G++S+ V TD G H+I T
Sbjct: 169 YSQDPGSAPNGGDLGWFGPGKMVKEFEDAAYKLKVGQVSDPVKTDYGYHIIKVT 222
>sp|Q5HN96|PRSA_STAEQ Foldase protein PrsA OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=prsA PE=3 SV=1
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
N + SHILIK K+ D EG +S+ + ++Q ++ KF E+A
Sbjct: 140 NSKKTSHILIK-----VKSKSSDKEG--LSDKKAKEKAEKIQK---EVEKNPNKFGEIAK 189
Query: 65 RLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S D SSAK+ G LG +GQM FE+A + LK GE+S+VV TD G H+I
Sbjct: 190 KESMDSSSAKKDGSLGYVIKGQMVDSFEKALFKLKEGEVSKVVKTDYGYHII 241
>sp|P60749|PRSA_STAAW Foldase protein PrsA OS=Staphylococcus aureus (strain MW2) GN=prsA
PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|A8YY10|PRSA_STAAT Foldase protein PrsA OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|Q6G894|PRSA_STAAS Foldase protein PrsA OS=Staphylococcus aureus (strain MSSA476)
GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|P60748|PRSA_STAAN Foldase protein PrsA OS=Staphylococcus aureus (strain N315) GN=prsA
PE=1 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|P60747|PRSA_STAAM Foldase protein PrsA OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=prsA PE=1 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|A6QI23|PRSA_STAAE Foldase protein PrsA OS=Staphylococcus aureus (strain Newman)
GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|Q5HET4|PRSA_STAAC Foldase protein PrsA OS=Staphylococcus aureus (strain COL) GN=prsA
PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|Q2G2S6|PRSA_STAA8 Foldase protein PrsA OS=Staphylococcus aureus (strain NCTC 8325)
GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|Q2FFQ5|PRSA_STAA3 Foldase protein PrsA OS=Staphylococcus aureus (strain USA300)
GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|A6U2U4|PRSA_STAA2 Foldase protein PrsA OS=Staphylococcus aureus (strain JH1) GN=prsA
PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|A7X3U8|PRSA_STAA1 Foldase protein PrsA OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=prsA PE=3 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+SEVV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 241
>sp|Q81GY5|PRSA1_BACCR Foldase protein PrsA 1 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA1 PE=3 SV=1
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 27/114 (23%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+++ASHIL+K + + +K +++++ GK+ F+E+A +
Sbjct: 132 EIKASHILVKDEATAKK-------------------------VKEELGQGKS-FEELAKQ 165
Query: 66 LS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S D S ++GGDLG F G+M K FE+A Y LK E+SE V + G H+I T
Sbjct: 166 YSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLKKDEVSEPVKSQFGYHIIKVT 219
>sp|Q2KXA6|SURA_BORA1 Chaperone SurA OS=Bordetella avium (strain 197N) GN=surA PE=3 SV=1
Length = 506
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
Q A HILIK V+S+ + A +L+ +R + SG AKF+++A
Sbjct: 352 TQTHARHILIKTSA-------------VMSD---QQARQRLEQVRQRLESGSAKFEDMAR 395
Query: 65 RLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S ++A +GGDLG G+M FE A +LK GEIS+ V++ G HL+
Sbjct: 396 QYSQDATAPQGGDLGWVNPGEMVPSFEAAMNSLKPGEISQPVESPFGWHLV 446
>sp|Q6GFL5|PRSA_STAAR Foldase protein PrsA OS=Staphylococcus aureus (strain MRSA252)
GN=prsA PE=3 SV=1
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+S+VV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSDVVKSSFGYHII 241
>sp|Q2YTZ6|PRSA_STAAB Foldase protein PrsA OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=prsA PE=3 SV=1
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 8 RASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLS 67
+ASHILIK + + D EG + A + + I+ ++ +KF E+A + S
Sbjct: 143 KASHILIKVKSKKS-----DKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKES 192
Query: 68 -DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
D SAK+ G+LG +GQ K FE+A + LK GE+S+VV + G H+I
Sbjct: 193 MDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSDVVKSSFGYHII 241
>sp|Q9KDN4|PRSA_BACHD Foldase protein PrsA OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=prsA PE=3
SV=1
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 27/114 (23%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
+V ASHIL++ + T E + +L+A D F E+AS
Sbjct: 157 EVEASHILVEDE------------------ETAEEVLDRLEAGDD--------FAELASE 190
Query: 66 LS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S D S+ GDLG FG+G M FEEA +N++I E+SE V++ G H+I+ T
Sbjct: 191 YSVDPSAEANNGDLGFFGKGDMVPEFEEAAFNMEIDEVSEPVESTYGYHIILVT 244
>sp|P24327|PRSA_BACSU Foldase protein PrsA OS=Bacillus subtilis (strain 168) GN=prsA PE=1
SV=1
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 27/114 (23%)
Query: 6 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASR 65
++RASHIL+ + + + K +G KF+++A
Sbjct: 136 KIRASHILVADKKTAEEVEKKLKKGE--------------------------KFEDLAKE 169
Query: 66 LSDCSSAKRGGDLGNFGR-GQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S SSA +GGDLG F + GQM + F +A + LK GE+S+ V T G H+I +T
Sbjct: 170 YSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKT 223
>sp|Q81TU1|PRSA2_BACAN Foldase protein PrsA 2 OS=Bacillus anthracis GN=prsA2 PE=1 SV=1
Length = 285
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 57 AKFDEVASRLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
A F+E+A + S D S ++GGDLG F G M FE A Y LKIG+IS+ V + +G H+I
Sbjct: 161 ASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIGQISDPVQSPNGYHII 220
Query: 116 MRTG 119
TG
Sbjct: 221 KLTG 224
>sp|Q475Q3|SURA_CUPPJ Chaperone SurA OS=Cupriavidus pinatubonensis (strain JMP134 / LMG
1197) GN=surA PE=3 SV=1
Length = 499
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 34 SNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEA 93
N A QL +RD I G F + A R S SA+ GG+LG G++ FE+A
Sbjct: 366 PNMPEAEARRQLGTLRDRITHG-GDFADAAKRFSQDGSAQAGGELGWVSPGELVPEFEQA 424
Query: 94 TYNLKIGEISEVVDTDSGVHLI 115
L+ GEISE V T GVHLI
Sbjct: 425 MNRLRPGEISEPVVTQFGVHLI 446
>sp|Q0VMV4|SURA_ALCBS Chaperone SurA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651
/ DSM 11573) GN=surA PE=3 SV=1
Length = 435
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 43 SQLQAIR--DDIVSGKAKFDEVASRLSD-CSSAKRGGDLGNFGRGQMQKPFEEATYNLKI 99
+Q +AIR D++ +GK +F E A+ SD SA+ GG+LG +G+M FE+ N +
Sbjct: 311 AQQRAIRLHDEVAAGKRQFKETAAEFSDDPGSARNGGELGWVNKGEMVPEFEQVMLNTPV 370
Query: 100 GEISEVVDTDSGVHLI 115
GE+S V ++ G H +
Sbjct: 371 GELSPVFESQFGWHFL 386
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 33 ISNTTRESAVSQLQAIRDDIVS---GKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKP 89
+ + R +SQ +A +I+ + F ++A LSD +A GGDLG Q
Sbjct: 192 VPSEARPQQISQARAKAKEIIERLEAGSDFQQLAIALSDGPNALEGGDLGWRPAAQWPTL 251
Query: 90 FEEATYNLKIGEISEVVDTDSGVHLI 115
F E NLK GE S+ + + +G H++
Sbjct: 252 FAENAINLKKGEFSQPLRSGAGFHIL 277
>sp|Q1LRA3|SURA_RALME Chaperone SurA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123
/ DSM 2839) GN=surA PE=3 SV=1
Length = 493
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 31 RVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPF 90
R N A Q+ IRD I G F + A R S SA +GG+LG G++ F
Sbjct: 357 RTGPNMPEAEAKRQMATIRDRITHG-VDFADAARRYSQDGSASQGGELGWVSPGELVPEF 415
Query: 91 EEATYNLKIGEISEVVDTDSGVHLI 115
E+A L+ GEIS+ V T GVHLI
Sbjct: 416 EQAMNRLRPGEISDPVVTQFGVHLI 440
>sp|Q7WG19|SURA_BORBR Chaperone SurA OS=Bordetella bronchiseptica (strain ATCC BAA-588 /
NCTC 13252 / RB50) GN=surA PE=3 SV=1
Length = 519
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
Q A HILIK + T + A +L+ IR+ + G KF+++A
Sbjct: 365 TQTHARHILIKTS----------------TVMTDDQARQRLEQIRERLQGGAVKFEDMAR 408
Query: 65 RLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S S+A +GGDLG G PFE A L+ EIS V + G HLI
Sbjct: 409 QYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHLI 459
>sp|Q7W4J5|SURA_BORPA Chaperone SurA OS=Bordetella parapertussis (strain 12822 / ATCC
BAA-587 / NCTC 13253) GN=surA PE=3 SV=1
Length = 519
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
Q A HILIK + T + A +L+ IR+ + G KF+++A
Sbjct: 365 TQTHARHILIKTS----------------TVMTDDQARQRLEQIRERLQGGAVKFEDMAR 408
Query: 65 RLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S S+A +GGDLG G PFE A L+ EIS V + G HLI
Sbjct: 409 QYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHLI 459
>sp|Q8Y220|SURA_RALSO Chaperone SurA OS=Ralstonia solanacearum (strain GMI1000) GN=surA
PE=3 SV=2
Length = 496
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 44 QLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEIS 103
QL +RD IV G F + A R S +SA GG+LG GQ+ FE+A LK GE+S
Sbjct: 373 QLAGLRDRIVHGY-DFGDAARRYSQDTSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVS 431
Query: 104 EVVDTDSGVHLIMRTG 119
+ V + G+HLI G
Sbjct: 432 QPVQSQFGLHLIQVEG 447
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 53 VSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGE-ISEVVDTDSG 111
V G A F ++A S A +GG+LG G++ F A +LK G+ + +V+++ +G
Sbjct: 270 VQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQFANAVVDLKPGQVVDQVIESPAG 329
Query: 112 VHLI 115
H++
Sbjct: 330 FHVL 333
>sp|Q7VU12|SURA_BORPE Chaperone SurA OS=Bordetella pertussis (strain Tohama I / ATCC
BAA-589 / NCTC 13251) GN=surA PE=3 SV=1
Length = 519
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
Q A HILIK + T + A +L+ IR+ + G KF+++A
Sbjct: 365 TQTHARHILIKTS----------------TVMTDDQARQRLEQIRERLQGGAVKFEDMAR 408
Query: 65 RLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
+ S S+A +GGDLG G PFE A L+ EIS + + G HLI
Sbjct: 409 QYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPMLSPFGWHLI 459
>sp|Q8R760|PRSA_THETN Foldase protein PrsA OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=prsA PE=3
SV=1
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 68 DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRTG 119
D ++ GGDLG F G M FEEA ++LK+GEIS+ V T G H+I G
Sbjct: 204 DTATKDNGGDLGEFPHGVMVPEFEEAAFSLKLGEISKPVKTQYGYHIIKSEG 255
>sp|Q7NQB0|SURA_CHRVO Chaperone SurA OS=Chromobacterium violaceum (strain ATCC 12472 /
DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=surA PE=3 SV=1
Length = 429
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 41 AVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIG 100
A +++ +RD I+ G AKF ++A S+ S +GGDLG G + FE+A +L IG
Sbjct: 304 AKARIDQVRDRIMRG-AKFADMAKLYSEDGSNAKGGDLGWVNMGDLVPEFEKAMVSLPIG 362
Query: 101 EISEVVDTDSGVHLIMRTG 119
++S+ V T G HLI+ G
Sbjct: 363 QVSQPVRTPFGWHLILVEG 381
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 51 DIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDS 110
D+ +G+ F +V++ SD +A +GGD+G + + F + +K+G ++V+ T
Sbjct: 206 DLAAGQP-FAKVSAAYSDAPNALKGGDMGWRSATSLPQEFVQLLEQMKVGADTDVIRTQQ 264
Query: 111 GVHLI 115
G +
Sbjct: 265 GFFIF 269
>sp|Q479U4|SURA_DECAR Chaperone SurA OS=Dechloromonas aromatica (strain RCB) GN=surA PE=3
SV=1
Length = 438
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 2 SSANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDE 61
+S Q A HILI+ V+S A +L+A+R+ I +G F E
Sbjct: 290 ASVQQTHARHILIRS-------------SEVLSEA---EATRKLEAVRERIANG-VDFAE 332
Query: 62 VASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
A S SA +GG+LG G FE A LKI E+S+VV + G+HLI
Sbjct: 333 QARLYSQDGSAAKGGELGWLNPGDTVPEFERAMDALKINEVSQVVQSPFGMHLI 386
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 59 FDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
F ++ + SD A +GGDLG ++ + EA L+ GE+S+++ + +G H++
Sbjct: 222 FAQLTAAFSDAPDALQGGDLGWRPLARLPALYAEAGSRLQSGEVSDLLRSSAGFHIV 278
>sp|Q81GN0|PRSA2_BACCR Foldase protein PrsA 2 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA2 PE=3 SV=1
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 57 AKFDEVASRLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
A F+E+A + S D S +GGDLG F G M FE A Y L +G+IS V + +G H+I
Sbjct: 161 ASFEELAKQESQDLLSKDKGGDLGYFNSGTMAPEFETAAYKLNVGQISNPVKSSNGYHVI 220
Query: 116 MRT 118
T
Sbjct: 221 KLT 223
>sp|Q8CXK4|PRSA_OCEIH Foldase protein PrsA OS=Oceanobacillus iheyensis (strain DSM 14371
/ JCM 11309 / KCTC 3954 / HTE831) GN=prsA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 59 FDEVASRLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLI 115
F E+A S D SA+ GGDLG F G M FEEA ++L+ GEIS+ V + G H+I
Sbjct: 166 FGELAQEYSTDTGSAENGGDLGYFSAGSMVPEFEEAAFSLEAGEISDPVQSTHGTHII 223
>sp|Q0AC82|SURA_ALHEH Chaperone SurA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=surA
PE=3 SV=1
Length = 433
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
+ R HIL+ PE S E A +++ +R+ I++G+ F+ A+
Sbjct: 175 QEYRLGHILVAT-----------PEA--ASTAQLEEARERIEQLREQIIAGETDFEGAAT 221
Query: 65 RLSDCSSAKRGGDLGNFGRGQMQKPFEEAT-YNLKIGEISEVVDTDSGVHLI 115
SD +SA GGDLG Q+ F EA L+ GE+S V+ SG HL+
Sbjct: 222 AFSDAASAMEGGDLGWRLHSQLPSLFAEAIDEGLQAGEVSGVLQNSSGFHLV 273
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 5 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVAS 64
+ RA HILI+ +G VI++ E A +L+++ + I +G++ F E+A
Sbjct: 287 TETRARHILIR------------TDGDVITD---EDARLRLRSLLERIEAGES-FAELAE 330
Query: 65 RLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118
S D SA RGGDLG GQ+ F+ A L+ G+IS + G H++ T
Sbjct: 331 AYSEDPGSAARGGDLGWTQPGQLVPEFQGAMDALEEGQISAPFASPFGWHIVQVT 385
>sp|Q81CB1|PRSA4_BACCR Foldase protein PrsA 4 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA4 PE=3 SV=1
Length = 280
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 46 QAIRDDIVSGKAKFDEVASRLS-DCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISE 104
+ I++ + SG+ F +A + S D S ++GG+L FG G M K FE+A Y L++G++SE
Sbjct: 149 KEIKEKLNSGED-FAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKLEVGQLSE 207
Query: 105 VVDTDSGVHLIMRT 118
V + G H+I T
Sbjct: 208 PVKSSFGYHIIKLT 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,141,934
Number of Sequences: 539616
Number of extensions: 1406707
Number of successful extensions: 3271
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3037
Number of HSP's gapped (non-prelim): 242
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)