Your job contains 1 sequence.
>033442
MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSGTSVKKRVE
DVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033442
(119 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093267 - symbol:AT3G15640 species:3702 "Arabi... 271 1.4e-23 1
TAIR|locus:2016284 - symbol:AT1G80230 species:3702 "Arabi... 269 2.3e-23 1
UNIPROTKB|P92683 - symbol:coxVb "Cytochrome c oxidase sub... 198 7.7e-16 1
TAIR|locus:2035069 - symbol:AT1G52710 species:3702 "Arabi... 152 5.8e-11 1
DICTYBASE|DDB_G0269118 - symbol:cxeA "cytochrome c oxidas... 86 0.00057 1
>TAIR|locus:2093267 [details] [associations]
symbol:AT3G15640 species:3702 "Arabidopsis thaliana"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0005740
"mitochondrial envelope" evidence=IEA;ISS] [GO:0046872 "metal ion
binding" evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0006007 "glucose
catabolic process" evidence=RCA] InterPro:IPR002124 Pfam:PF01215
ProDom:PD007270 PROSITE:PS51359 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0050897 EMBL:AB017071
GO:GO:0009060 GO:GO:0004129 GO:GO:0009535 GO:GO:0006123
GO:GO:0005751 HOGENOM:HOG000184129 KO:K02265 Gene3D:2.60.11.10
PANTHER:PTHR10122 PROSITE:PS00848 EMBL:AF367258 EMBL:AY055100
EMBL:AY087329 IPI:IPI00537533 RefSeq:NP_188185.1 UniGene:At.23818
ProteinModelPortal:Q9LW15 SMR:Q9LW15 IntAct:Q9LW15 STRING:Q9LW15
PRIDE:Q9LW15 EnsemblPlants:AT3G15640.1 GeneID:820806
KEGG:ath:AT3G15640 GeneFarm:3643 TAIR:At3g15640 InParanoid:Q9LW15
OMA:RRIVSSQ PhylomeDB:Q9LW15 ProtClustDB:PLN02294
Genevestigator:Q9LW15 Uniprot:Q9LW15
Length = 176
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 63/127 (49%), Positives = 74/127 (58%)
Query: 1 MWRRICSSXXXXXXXXXXXYSCR---SAPVNPS----IASRSLISRPLFA-SRHFSADS- 51
MWRRI SS S R +A P A+RS IS F R FS+DS
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60
Query: 52 GTSVKKRVEDVNPVATGHXXXXXXXXXXGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIV 111
T K+VEDV P+ATGH G+ + +ID+P GPFGTK+APA+VKSYYDKRIV
Sbjct: 61 ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 112 GCPGGEG 118
GCPGGEG
Sbjct: 121 GCPGGEG 127
>TAIR|locus:2016284 [details] [associations]
symbol:AT1G80230 species:3702 "Arabidopsis thaliana"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0005740
"mitochondrial envelope" evidence=IEA;ISS] InterPro:IPR002124
Pfam:PF01215 ProDom:PD007270 PROSITE:PS51359 EMBL:CP002684
GO:GO:0005739 GO:GO:0046872 GO:GO:0009060 EMBL:AC009322
GO:GO:0004129 GO:GO:0006123 GO:GO:0005751 eggNOG:NOG316751
HOGENOM:HOG000184129 KO:K02265 Gene3D:2.60.11.10 PANTHER:PTHR10122
PROSITE:PS00848 ProtClustDB:PLN02294 EMBL:BT006403 EMBL:AK227631
EMBL:AY086953 IPI:IPI00540921 PIR:H96833 RefSeq:NP_178140.1
UniGene:At.28001 ProteinModelPortal:Q9SSB8 SMR:Q9SSB8 STRING:Q9SSB8
PRIDE:Q9SSB8 EnsemblPlants:AT1G80230.1 GeneID:844363
KEGG:ath:AT1G80230 GeneFarm:3644 TAIR:At1g80230 InParanoid:Q9SSB8
OMA:MWKRATS PhylomeDB:Q9SSB8 BioCyc:ARA:AT1G80230-MONOMER
BioCyc:MetaCyc:AT1G80230-MONOMER Genevestigator:Q9SSB8
Uniprot:Q9SSB8
Length = 171
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 64/127 (50%), Positives = 78/127 (61%)
Query: 1 MWRRICSSXXXXXXXXXX--XYSCRSAPVNP---SIASRSLISRPLFAS---RHF-SADS 51
MWRRI SS SCR A V S+++R+ S P ++S R SA +
Sbjct: 1 MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRAS-SIPAYSSIFSRLIGSAAA 59
Query: 52 GTSVKKRVEDVNPVATGHXXXXXXXXXXGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIV 111
T+VKKRVEDV P+ATGH G+ + +ID+P GPFGTK+APAVVKSYYD RIV
Sbjct: 60 DTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIV 119
Query: 112 GCPGGEG 118
GCPGGEG
Sbjct: 120 GCPGGEG 126
>UNIPROTKB|P92683 [details] [associations]
symbol:coxVb "Cytochrome c oxidase subunit Vb"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR002124 Pfam:PF01215
ProDom:PD007270 PROSITE:PS51359 GO:GO:0005739 GO:GO:0008270
GO:GO:0005740 GO:GO:0050897 GO:GO:0004129 GO:GO:0009535
EMBL:AP008207 eggNOG:NOG316751 HOGENOM:HOG000184129 KO:K02265
Gene3D:2.60.11.10 PANTHER:PTHR10122 OMA:RRIVSSQ EMBL:AP003314
EMBL:D85381 EMBL:AK071340 PIR:T03033 RefSeq:NP_001043555.1
UniGene:Os.3455 STRING:P92683 EnsemblPlants:LOC_Os01g42650.1
GeneID:4325317 KEGG:dosa:Os06t0142700-01 KEGG:osa:4325317
ProtClustDB:CLSN2691580 Uniprot:P92683
Length = 169
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 47/121 (38%), Positives = 61/121 (50%)
Query: 1 MWRRICSSXXXXXXXXXXXYSCR-SAPVNPSIASRS--LISRPLFASRHFSADSGTSVKK 57
MWRR+ + S S P+ +R+ L + A R S
Sbjct: 1 MWRRLQTLAPALRRAASASASAAASGAAGPASLARAAPLSTAAAAAFRRTSPLLSGDKPA 60
Query: 58 RVEDVNPVATGHXXXXXXXXXXGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGE 117
VEDV P+ATG G+ ++D P GPFGTK+APAV++SYY+KRIVGCPGGE
Sbjct: 61 TVEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGE 120
Query: 118 G 118
G
Sbjct: 121 G 121
>TAIR|locus:2035069 [details] [associations]
symbol:AT1G52710 species:3702 "Arabidopsis thaliana"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0005740
"mitochondrial envelope" evidence=IEA] InterPro:IPR002124
Pfam:PF01215 ProDom:PD007270 PROSITE:PS51359 EMBL:CP002684
GO:GO:0046872 GO:GO:0005740 GO:GO:0004129 Gene3D:2.60.11.10
PANTHER:PTHR10122 EMBL:AC008016 EMBL:AK119073 EMBL:BX841959
IPI:IPI00531716 IPI:IPI00534286 RefSeq:NP_001185205.1
RefSeq:NP_175680.2 UniGene:At.11638 ProteinModelPortal:Q9SSS5
SMR:Q9SSS5 GeneID:841704 KEGG:ath:AT1G52710 TAIR:At1g52710
OMA:GEDEHYV Genevestigator:Q9SSS5 Uniprot:Q9SSS5
Length = 90
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Query: 80 GKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 118
G+ +L+ID+P PFGTK++PAVV+SY+DKR +GC GGEG
Sbjct: 10 GRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEG 48
>DICTYBASE|DDB_G0269118 [details] [associations]
symbol:cxeA "cytochrome c oxidase subunit V"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IEP] [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002124 Pfam:PF01215
ProDom:PD007270 PROSITE:PS51359 dictyBase:DDB_G0269118
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 GO:GO:0005743 GO:GO:0046872 GO:GO:0004129
Gene3D:2.60.11.10 InterPro:IPR020893 PANTHER:PTHR10122
PROSITE:PS00848 EMBL:X55671 EMBL:X64771 PIR:S19718
RefSeq:XP_646433.1 ProteinModelPortal:P29505 SWISS-2DPAGE:P29505
EnsemblProtists:DDB0191104 GeneID:8617392 KEGG:ddi:DDB_G0269118
eggNOG:NOG258525 OMA:PVIVESI Uniprot:P29505
Length = 120
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 90 TGPFGTKDAPAVVKSYYDKRIVGCPGGEG 118
TG FGT +P +V+S + RIV C GG+G
Sbjct: 53 TGAFGTLKSPVIVESIFHSRIVACEGGDG 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 119 98 0.00091 102 3 11 22 0.42 30
29 0.45 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 535 (57 KB)
Total size of DFA: 110 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.48u 0.09s 9.57t Elapsed: 00:00:01
Total cpu time: 9.48u 0.09s 9.57t Elapsed: 00:00:01
Start: Sat May 11 03:22:21 2013 End: Sat May 11 03:22:22 2013