BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033451
MSGTEEVKDQEMVDGNAPEESQKTMPSSEEEEAALKKKYGGIVPKKPPLISKDHERAYFD
SADWALGKQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPAGGEDGGSAPPEDATANE

High Scoring Gene Products

Symbol, full name Information P value
AT5G64130 protein from Arabidopsis thaliana 1.1e-38
AT1G69510 protein from Arabidopsis thaliana 3.5e-27
AT4G16146 protein from Arabidopsis thaliana 3.4e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033451
        (119 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164376 - symbol:AT5G64130 "AT5G64130" species...   295  1.1e-38   2
TAIR|locus:2007191 - symbol:AT1G69510 "AT1G69510" species...   305  3.5e-27   1
TAIR|locus:505006476 - symbol:AT4G16146 "AT4G16146" speci...   173  3.4e-13   1


>TAIR|locus:2164376 [details] [associations]
            symbol:AT5G64130 "AT5G64130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002688 InterPro:IPR006760
            Pfam:PF04667 EMBL:AB008266 EMBL:AK316945 IPI:IPI00846765
            RefSeq:NP_001078792.1 UniGene:At.24633 PaxDb:A8MS32 PRIDE:A8MS32
            EnsemblPlants:AT5G64130.3 GeneID:836534 KEGG:ath:AT5G64130
            TAIR:At5g64130 eggNOG:NOG272037 HOGENOM:HOG000237718 OMA:CAPSEGG
            PhylomeDB:A8MS32 ProtClustDB:CLSN2690075 Genevestigator:A8MS32
            Uniprot:A8MS32
        Length = 140

 Score = 295 (108.9 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 56/69 (81%), Positives = 61/69 (88%)

Query:    51 SKDHERAYFDSADWALGKQGVEKPKGPLEALRPKLQPTQQQTRYRKSPYAPA-GGEDGGS 109
             ++DHERAYFDSADWALGKQGV KPKGPLEALRPKLQPTQQQTRYRKSP AP+ GGEDGG+
Sbjct:    72 NQDHERAYFDSADWALGKQGVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGA 131

Query:   110 APPEDATAN 118
             A  E  + N
Sbjct:   132 AQAEGGSGN 140

 Score = 135 (52.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query:     1 MSGTEEVKDQEMVDGNAPEESQKTMPXXXXXXXXLKKKYGGIVPKKPPLISKDHE 55
             MS  E+VK+Q    GN   E++K+MP        +KKKYGG++PKKPPLISK  E
Sbjct:     1 MSSAEDVKEQ----GNLTNEAEKSMPSSQQEEAVVKKKYGGLMPKKPPLISKVSE 51


>TAIR|locus:2007191 [details] [associations]
            symbol:AT1G69510 "AT1G69510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC073178
            InterPro:IPR006760 Pfam:PF04667 HOGENOM:HOG000237718 EMBL:AY093229
            EMBL:AY084454 EMBL:AY128824 IPI:IPI00534306 RefSeq:NP_564967.1
            RefSeq:NP_849867.1 RefSeq:NP_974115.1 UniGene:At.43574
            STRING:Q9C787 PaxDb:Q9C787 PRIDE:Q9C787 EnsemblPlants:AT1G69510.1
            EnsemblPlants:AT1G69510.2 EnsemblPlants:AT1G69510.3 GeneID:843284
            KEGG:ath:AT1G69510 TAIR:At1g69510 eggNOG:NOG305581
            InParanoid:Q9C787 OMA:RARRMAY PhylomeDB:Q9C787
            ProtClustDB:CLSN2689108 ArrayExpress:Q9C787 Genevestigator:Q9C787
            Uniprot:Q9C787
        Length = 137

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 66/119 (55%), Positives = 82/119 (68%)

Query:     5 EEVKDQEMVDGNAPEESQKTMPXXXXXXXXLKKKYGGIVPKKPPLISKDHERAYFDSADW 64
             E+VK +E++D +AP ++ K           +KKKYGG++PKK PLISKDHERA+FDSADW
Sbjct:     2 EDVKGKEIID-DAPIDN-KVSDEMESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADW 59

Query:    65 ALGKQGVEKPKGPLEALRPKLQPT-QQQTRYRKSPYAPAGGED----GGSAPPEDATAN 118
             ALGKQ  +KPKGPLEALRPKLQPT QQQ R R+  Y+    ED       AP + A A+
Sbjct:    60 ALGKQKGQKPKGPLEALRPKLQPTPQQQPRARRMAYSSGETEDTEIDNNEAPDDQACAS 118


>TAIR|locus:505006476 [details] [associations]
            symbol:AT4G16146 "AT4G16146" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
            EMBL:CP002687 InterPro:IPR006760 Pfam:PF04667 IPI:IPI00545576
            RefSeq:NP_567486.1 UniGene:At.33107 PRIDE:F4JLP3
            EnsemblPlants:AT4G16146.1 GeneID:827304 KEGG:ath:AT4G16146
            OMA:WALCKQG Uniprot:F4JLP3
        Length = 102

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 37/72 (51%), Positives = 47/72 (65%)

Query:    38 KYGGIVPKKPPLISKDHERAYFDSADWALGKQGV---EKPKGPLEALRPKLQPTQQQTRY 94
             KYGG+VPKK PLISKD +RA+FDSADWAL KQ     ++    +E LRPKLQ T ++   
Sbjct:    25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIEKLRPKLQRTPRKQLS 84

Query:    95 RKSPYAPAGGED 106
              + P    G E+
Sbjct:    85 PRRPTCATGNEN 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.128   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       111   0.00091  102 3  11 23  0.47    31
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  527 (56 KB)
  Total size of DFA:  115 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.06u 0.07s 14.13t   Elapsed:  00:00:12
  Total cpu time:  14.06u 0.07s 14.13t   Elapsed:  00:00:13
  Start:  Thu May  9 13:39:04 2013   End:  Thu May  9 13:39:17 2013

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