BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033455
(119 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%)
Query: 2 ATLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLND 61
+T + +ED P M +++ E F+SELC GF L D E+ LIT ESL+RNS +LG+
Sbjct: 14 STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73
Query: 62 MMDDEIVCMLSEGDLDGDGALSQFEFCILMVRLSPGLMEGSPQSMEGS 109
M ++ M+ EGDLDGDGAL+Q EFC+LMVRLSP +ME + +E +
Sbjct: 74 MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKA 121
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DFE++ M ++G E+ F+ D E G I+F++LKR + LG N M D+E+
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGEN-MTDEELQ 120
Query: 69 CMLSEGDLDGDGALSQFEFCILMVRLS 95
M+ E D DGDG +++ EF +M + S
Sbjct: 121 EMIDEADRDGDGEVNEEEFFRIMKKTS 147
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
+F D+ M +++ + E+ F+ D E G I+F++LKR + LG N + D+E+
Sbjct: 2 NFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN-LTDEELQ 60
Query: 69 CMLSEGDLDGDGALSQFEFCILMVRLS 95
M+ E D DGDG +S+ EF +M + S
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
+F D+ M +++ + E+ F+ D E G I+F++LKR + LG N + D+E+
Sbjct: 60 NFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN-LTDEELQ 118
Query: 69 CMLSEGDLDGDGALSQFEFCILMVR 93
M+ E D DGDG +S+ EF +M +
Sbjct: 119 EMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 29 ELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFC 88
E+ F+ D E G I+F++LKR + LG N + D+E+ M+ E D DGDG +S+ EF
Sbjct: 12 EILKAFKLFDDDETGKISFKNLKRVAKELGEN-LTDEELQEMIDEADRDGDGEVSEQEFL 70
Query: 89 ILMVRLS 95
+M + S
Sbjct: 71 RIMKKTS 77
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
+F D+ ++ + E+ F+ D E G I+F++LKR + LG N + D+E+
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN-LTDEELQ 143
Query: 69 CMLSEGDLDGDGALSQFEFCILMVRLS 95
+ E D DGDG +S+ EF + + S
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRIXKKTS 170
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 10 FEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVC 69
++D++ M +++ + E+ FQ D G I+ ++L+R + LG + D+E+
Sbjct: 78 YDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 70 MLSEGDLDGDGALSQFEFCIL 90
M+ E DLDGDG +++ EF +
Sbjct: 137 MIEEFDLDGDGEINENEFIAI 157
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ + EL F+ GLI+ L+ LG + DDE+
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +MV
Sbjct: 123 EMIREADIDGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ + EL F+ GLI+ L+ LG + DDE+
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +MV
Sbjct: 123 EMIREADIDGDGHINYEEFVRMMV 146
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
+F+++ M K++ EL F+ + G I+ L+ + LG + D+E+
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVE 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMVRL 94
M+ E DLDGDG ++ EF +M+ +
Sbjct: 123 QMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 10 FEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVC 69
++D++ +++ + E+ FQ D G I+ ++L+R + LG + D+E+
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 70 MLSEGDLDGDGALSQFEFCIL 90
+ E DLDGDG +++ EF +
Sbjct: 137 XIEEFDLDGDGEINENEFIAI 157
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 29 ELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFC 88
EL F+ GLI+ L+ LG + DDE+ M+ E D+DGDG ++ EF
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 89 ILMV 92
+MV
Sbjct: 68 RMMV 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 29 ELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFC 88
EL F+ + G I+ L+ + LG + D+E+ M+ E DLDGDG ++ EF
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 89 ILM 91
+M
Sbjct: 69 KMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 28 SELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEF 87
EL F+ + G I+ L+ + LG + D+E+ M+ E DLDGDG ++ EF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 88 CILMVRL 94
+M+ +
Sbjct: 63 VKMMMTV 69
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ EL F+ + G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M+
Sbjct: 124 EMIREADVDGDGQINYEEFVKVMM 147
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ EL F+ + G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M+
Sbjct: 124 EMIREADVDGDGQINYDEFVKVMM 147
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 23 AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGAL 82
E ISE F G IT + L LG N + E+ M++E D DG+G +
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTI 64
Query: 83 SQFEFCILMVR 93
EF LM R
Sbjct: 65 DFPEFLNLMAR 75
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 13 YFPSMIKRLGAEGFISELCYGFQRLMDGE-KGLITFESLKRNSLLLGLNDMMDDEIVCML 71
YF S++K +E I E R+ D + G I+ L+ LG + D+E+ M+
Sbjct: 17 YFQSLMKDTDSEEEIREAF----RVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMI 71
Query: 72 SEGDLDGDGALSQFEFCILMV 92
E D+DGDG ++ EF +M
Sbjct: 72 READIDGDGQVNYEEFVQMMT 92
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMMT 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMMT 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMMT 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMMT 146
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIRESDIDGDGQVNYEEFVTMMT 147
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 33.5 bits (75), Expect = 0.033, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 389
Query: 69 CMLSEGDLDGDGALSQFEFCILM 91
M+ E D+DGDG ++ EF +M
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMM 412
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 334
Query: 87 FCILMVR 93
F +M R
Sbjct: 335 FLTMMAR 341
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 QMIREADIDGDGQVNYEEFVQMMT 147
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 389
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMMT 413
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 334
Query: 87 FCILMVR 93
F +M R
Sbjct: 335 FLTMMAR 341
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 422
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMMT 446
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 5 LFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMD 64
+ H E P + E I+E F G IT + L LG N +
Sbjct: 291 ILGHKLEYNLPDQL----TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-E 345
Query: 65 DEIVCMLSEGDLDGDGALSQFEFCILMVR 93
E+ M++E D DGDG + EF +M R
Sbjct: 346 AELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMMT 447
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DG+G + EF +M R
Sbjct: 326 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMMT 447
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DGDG + EF +M R
Sbjct: 326 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGDGTIDFPEFLTMMAR 375
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 386
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 387 EMIREADIDGDGQVNYEEFVQMMT 410
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 331
Query: 87 FCILMVR 93
F +M R
Sbjct: 332 FLTMMAR 338
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMMT 447
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DG+G + EF +M R
Sbjct: 326 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 422
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMMT 446
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 5 LFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMD 64
+ H E P + E I+E F G IT + L LG N +
Sbjct: 291 ILGHKLEYNLPDQL----TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-E 345
Query: 65 DEIVCMLSEGDLDGDGALSQFEFCILMVR 93
E+ M++E D DGDG + EF +M R
Sbjct: 346 AELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMMT 447
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DG+G + EF +M R
Sbjct: 326 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMAR 375
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 128
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 129 EMIREADIDGDGQVNYEEFVQMMT 152
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 124
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 125 EMIREADIDGDGQVNYEEFVQMMT 148
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 16 SMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGD 75
SM +L E I+E F G IT + L LG N + E+ M++E D
Sbjct: 1 SMADQLTEEQ-IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVD 58
Query: 76 LDGDGALSQFEFCILMVR 93
DG+G + EF +M R
Sbjct: 59 ADGNGTIDFPEFLTMMAR 76
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMMT 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 119
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 120 EMIREADIDGDGQVNYEEFVQMMT 143
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 424
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 425 EMIREADIDGDGQVNYEEFVQMMT 448
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DG+G + EF +M R
Sbjct: 327 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMAR 376
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMMT 146
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DGDG + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ EL F+ G I+ L+ LG + D+E+
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 119
Query: 69 CMLSEGDLDGDGALSQFEFCILM 91
M+ E D+DGDG ++ EF +M
Sbjct: 120 EMIREADVDGDGQVNYEEFVQVM 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 60 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 118
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 119 EMIREADIDGDGQVNYEEFVQMMT 142
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 126
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 127 EMIREADIDGDGQVNYEEFVQMMT 150
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 120
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMT 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 120
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMT 144
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 121
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 122 EMIREADIDGDGQVNYEEFVQMMT 145
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 29 ELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEF- 87
EL F+ L +KG+I + L+ LG +++ +DEI M++E D DG G + EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 88 CILM 91
C++M
Sbjct: 67 CLMM 70
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 422
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMMT 446
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DGDG + EF +M R
Sbjct: 325 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 120
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMT 144
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 9 DFEDYFPSMIKRLG-AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEI 67
DF ++ M +++ +E I E F + DG G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDSEEEIREAFRVFDK--DG-NGFISAAELRHVMTNLG-EKLTDEEV 119
Query: 68 VCMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMMT 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMMT 146
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ EL F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILM 91
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVD 123
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMMT 146
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 32.0 bits (71), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 29 ELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFC 88
EL F+ + G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 89 ILM 91
+M
Sbjct: 64 KVM 66
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 414
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 415 EMIREADIDGDGQVNYEEFVQMMT 438
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + L LG N + E+ M++E D DGDG + EF I+M R
Sbjct: 317 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGDGTIDFPEFLIMMAR 366
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M + + E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E D+DGDG ++ EF +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMMT 447
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVRL 94
G IT + L LG N + E+ M++E D DG+G + EF +M R
Sbjct: 326 GTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMARW 376
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E ++DGDG ++ EF +M
Sbjct: 123 EMIREANIDGDGQVNYEEFVQMMT 146
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ +L F+ G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILM 91
M+ E D+DGDG ++ EF +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 38 MDGEKGLITFESLKRNSLLLGLND----MMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
+DG G I+ E LKR + G +D ++D I +L E DL+GDG + EF ++M +
Sbjct: 140 IDGN-GKISVEELKR---IFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 14 FPSMIKRLGAEGFISELCYGFQ---RLMDGEK-GLITFESLKRNSLLLGLNDMMDDEIVC 69
F R+ AE E G + +D +K G ITFE LK +G N + + EI+
Sbjct: 9 FKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGAN-LKESEILD 67
Query: 70 MLSEGDLDGDGALSQFEFCILMVRLSP 96
+ D+D G + EF + L+
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATLHLNK 94
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 37 LMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
+ D E G I+ + L + +LG N +E+ M+ E D DG G + EF ++MVR
Sbjct: 28 IQDAEDGCISTKELGKVMRMLGQNPT-PEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 37 LMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
+ D E G I+ + L + +LG N + E+ M+ E D DG G + EF ++MVR
Sbjct: 28 IQDAEDGCISTKELGKVMRMLGQNPTPE-ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 42 KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 16 NGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 42 KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 19 NGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 24 GYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 23 GYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 42 KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 20 NGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 42 KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILM 91
G I+ L+ LG + D+E+ M+ E D+DGDG ++ EF +M
Sbjct: 19 NGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 11 EDYFPSMIKRLGAEGFISELCYGFQRLMDG-EKGLITFESLKRNSLLLGLNDMMDDEIVC 69
+D + + +++L E +E F + G E G I+ + L + +LG N +E+
Sbjct: 2 DDIYKAAVEQLTEEQ-KNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPT-PEELQE 59
Query: 70 MLSEGDLDGDGALSQFEFCILMVR 93
M+ E D DG G + EF ++MVR
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 14 FPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSE 73
F +M+ R + E+ F+ G I+ L+ LG + D+E+ M+ E
Sbjct: 64 FLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIRE 122
Query: 74 GDLDGDGALSQFEFCILMV 92
++DGDG ++ EF +M
Sbjct: 123 ANIDGDGQVNYEEFVQMMT 141
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF ++ M +++ E+ F+ G ++ L+ LG + D+E+
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG-EKLSDEEVD 122
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ D DGDG ++ EF ++V
Sbjct: 123 EMIRAADTDGDGQVNYEEFVRVLV 146
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 23 AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGAL 82
A + +L F+ G IT + L+R LG + +E+ M+ E D+D DG +
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRV 59
Query: 83 SQFEFCILMVR 93
+ EF ++ +
Sbjct: 60 NYEEFARMLAQ 70
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIV 68
DF + M +++ E+ F+ G I+ L+ LG + D+E+
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG-EKLTDEEVD 423
Query: 69 CMLSEGDLDGDGALSQFEFCILMV 92
M+ E +DGDG ++ +F +M
Sbjct: 424 EMIREAGIDGDGQVNYEQFVQMMT 447
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 34 FQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
F+R G I+ L L L DE+ M++E D DGDG + EF I
Sbjct: 8 FKRFDTNGDGKISLSEL--TDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF-ISFCN 64
Query: 94 LSPGLME 100
+PGLM+
Sbjct: 65 ANPGLMK 71
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVRL 94
G IT + L LGLN + E+ M++E D DG+G + EF +M R+
Sbjct: 25 GTITTKELGTVMRSLGLNPT-EAELQDMINEVDADGNGTIDFPEFLTMMARI 75
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N +E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 34 FQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
F+R G I+ L L L DE+ M++E D DGDG + EF I
Sbjct: 9 FKRFDTNGDGKISLSEL--TDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF-ISFCN 65
Query: 94 LSPGLME 100
+PGLM+
Sbjct: 66 ANPGLMK 72
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N +E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N +E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 42 KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMV 92
G I+ L+ LG + D+E+ M+ E D+DGDG ++ +F +M
Sbjct: 21 NGYISAADLRHVMTNLGEK-LTDEEVDEMIREADIDGDGQVNYEDFVQMMT 70
>pdb|4F8A|A Chain A, Cyclic Nucleotide Binding-Homology Domain From Mouse
Eag1 Potassium Channel
Length = 160
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 20 RLGAEGFISELCYGFQRLMDGEKGLITFESLKRNSLLL----GLNDMMDDEIVCMLSEGD 75
RL ++G + L FQ + LI +SL L + DDE+V +L +GD
Sbjct: 36 RLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVVAILGKGD 95
Query: 76 LDGD 79
+ GD
Sbjct: 96 VFGD 99
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N +E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT-PEELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DGDG + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N + E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPE-ELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + EF ++MVR
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVR 83
>pdb|4DUG|D Chain D, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
Length = 519
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|4DUG|A Chain A, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
pdb|4DUG|B Chain B, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
pdb|4DUG|C Chain C, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
pdb|4DUG|E Chain E, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
pdb|4DUG|F Chain F, Crystal Structure Of Circadian Clock Protein Kaic E318a
Mutant
Length = 519
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 62 MMDDEIVCMLSEGDLDGDGALSQFEFCILM 91
+ D+EI M+ E D DGDG ++ EF ++
Sbjct: 116 VTDEEIDEMIREADFDGDGMINYEEFVWMI 145
>pdb|1U9I|C Chain C, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|1U9I|D Chain D, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|2GBL|C Chain C, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
pdb|2GBL|D Chain D, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0C|C Chain C, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0C|D Chain D, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K09|C Chain C, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
pdb|3K09|D Chain D, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
pdb|3K09|F Chain F, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|4IJM|A Chain A, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
pdb|4IJM|B Chain B, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
pdb|4IJM|C Chain C, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
pdb|4IJM|D Chain D, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
pdb|4IJM|E Chain E, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
pdb|4IJM|F Chain F, Crystal Structure Of Circadian Clock Protein Kaic A422v
Mutant
Length = 512
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 165 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 211
>pdb|1TF7|A Chain A, Crystal Structure Of Circadian Clock Protein Kaic
pdb|1TF7|B Chain B, Crystal Structure Of Circadian Clock Protein Kaic
pdb|1TF7|C Chain C, Crystal Structure Of Circadian Clock Protein Kaic
pdb|1TF7|D Chain D, Crystal Structure Of Circadian Clock Protein Kaic
pdb|1TF7|E Chain E, Crystal Structure Of Circadian Clock Protein Kaic
pdb|1TF7|F Chain F, Crystal Structure Of Circadian Clock Protein Kaic
Length = 525
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0F|B Chain B, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0F|C Chain C, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0F|D Chain D, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0F|E Chain E, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0F|F Chain F, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0F|A Chain A, Crystal Structure Of The Phosphorylation-Site Double
Mutant T426aT432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0A|B Chain B, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
pdb|3K0A|C Chain C, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
pdb|3K0A|D Chain D, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
pdb|3K0A|E Chain E, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
pdb|3K0A|F Chain F, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0A|A Chain A, Crystal Structure Of The Phosphorylation-Site Mutant S431a
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3JZM|A Chain A, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
pdb|3JZM|B Chain B, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
pdb|3JZM|C Chain C, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
pdb|3JZM|D Chain D, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
pdb|3JZM|E Chain E, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
pdb|3JZM|F Chain F, Crystal Structure Of The Phosphorylation-Site Mutant T432a
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 34 FQRLMDGEKGLITFESLKRNSLLLGLN----DMMDDEIVCMLSEGDLDGDGALSQFEFCI 89
F+ L + G I E LK +L G + D+ D E +L+ GD D DG + EF
Sbjct: 47 FEILDKDQSGFIEEEELK--GVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAK 104
Query: 90 LMVR 93
++ +
Sbjct: 105 MVAQ 108
>pdb|3K0C|A Chain A, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0C|B Chain B, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0C|E Chain E, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3K0C|F Chain F, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431aT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 519
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K09|A Chain A, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
pdb|3K09|B Chain B, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
pdb|3K09|E Chain E, Crystal Structure Of The Phosphorylation-Site Mutant S431d
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|1U9I|A Chain A, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|1U9I|B Chain B, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|1U9I|E Chain E, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|1U9I|F Chain F, Crystal Structure Of Circadian Clock Protein Kaic With
Phosphorylation Sites
pdb|2GBL|A Chain A, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
pdb|2GBL|B Chain B, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
pdb|2GBL|E Chain E, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
pdb|2GBL|F Chain F, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Phosphorylation Sites
pdb|3DVL|A Chain A, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
pdb|3DVL|B Chain B, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
pdb|3DVL|C Chain C, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
pdb|3DVL|D Chain D, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
pdb|3DVL|E Chain E, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
pdb|3DVL|F Chain F, Crystal Structure Of Full Length Circadian Clock Protein
Kaic With Correct Geometry At Phosphorylation Sites
Length = 519
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3S1A|B Chain B, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3S1A|C Chain C, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3S1A|D Chain D, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3S1A|E Chain E, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 525
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3S1A|A Chain A, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
pdb|3S1A|F Chain F, Crystal Structure Of The Phosphorylation-Site Double
Mutant S431eT432E OF THE KAIC CIRCADIAN CLOCK PROTEIN
Length = 525
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|3K0E|A Chain A, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
pdb|3K0E|B Chain B, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
pdb|3K0E|C Chain C, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
pdb|3K0E|D Chain D, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
pdb|3K0E|E Chain E, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
pdb|3K0E|F Chain F, Crystal Structure Of The Phosphorylation-Site Mutant T426n
Of The Kaic Circadian Clock Protein
Length = 519
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 TLLFDHDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEKGLITFESLK 51
T++ E+Y P I R G E F+S+ + +++GE+ T E LK
Sbjct: 178 TVMTTERIEEYGP--IARYGVEEFVSDNVVILRNVLEGERRRRTLEILK 224
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGE-KGLITFESLKRNSLLLGLNDMMDDEI 67
DF ++ ++ E+ F R+ D + G I+ L+ LG + D+E+
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAF-RVFDKDGNGYISAAELRHVXTNLGEK-LTDEEV 122
Query: 68 VCMLSEGDLDGDGALSQFEFC 88
+ E D+DGDG ++ EF
Sbjct: 123 DQXIREADIDGDGQVNYEEFV 143
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 28 SELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEF 87
E+ F+ G+I F+ K +G + D E+ + E D DG+G + EF
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 88 CILMVRLSPGLME 100
L+ + L E
Sbjct: 68 MDLIKKSKNALKE 80
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 58 GLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILM 91
G + D E L GD DGDGA+ E+ L+
Sbjct: 74 GARALTDAETKAFLKAGDSDGDGAIGVDEWAALV 107
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 9 DFEDYFPSMIKRLGAEGFISELCYGFQRLMDGE-KGLITFESLKRNSLLLGLNDMMDDEI 67
DF ++ ++ E+ F R+ D + G I+ L+ LG + D+E+
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAF-RVFDKDGNGYISAAELRHVXTNLGEK-LTDEEV 121
Query: 68 VCMLSEGDLDGDGALSQFEFC 88
+ E D+DGDG ++ EF
Sbjct: 122 DEXIREADIDGDGQVNYEEFV 142
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 18 IKRLGAEGFISELCYGFQRLMD-----GEKGLITFESLKRNSLLLGLNDMMDDEIVCMLS 72
I + E E F+ D E G I+ + L + +LG N +E+ M+
Sbjct: 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT-PEELQEMID 62
Query: 73 EGDLDGDGALSQFEFCILMVR 93
E D DG G + E+ ++MVR
Sbjct: 63 EVDEDGSGTVDFDEWLVMMVR 83
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 34 FQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
F+R G I+ L L L + DE+ M++E D DGDG +S EF R
Sbjct: 17 FKRFDTNGDGKISSSEL--GDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF-AR 73
Query: 94 LSPGLME 100
+ GL++
Sbjct: 74 ANRGLVK 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 9 DFEDYFPSMIKRLG------AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDM 62
DFE++ M++++ +E ++EL F R DG I E L G + +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADG---YIDAEELAEIFRASGEH-V 126
Query: 63 MDDEIVCMLSEGDLDGDGALSQFEFCILM 91
D+EI ++ +GD + DG + EF +M
Sbjct: 127 TDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 34 FQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
F+R G I+ L L L + DE+ M++E D DGDG +S EF R
Sbjct: 15 FKRFDANGDGKISAAEL--GEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFG-R 71
Query: 94 LSPGLME 100
+ GL++
Sbjct: 72 ANRGLLK 78
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 43 GLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILMVR 93
G IT + +++ GL+D+ D+ M+ E D D DG + EF +M +
Sbjct: 97 GYITLDEIQQACKDFGLDDIHIDD---MIKEIDQDNDGQIDYGEFAAMMRK 144
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 23 AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGAL 82
+E I+E F G I+ ++L +LG N +E+ ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTI 73
Query: 83 SQFEFCILMVR 93
EF ++MVR
Sbjct: 74 DFEEFLVMMVR 84
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 36 RLMDGE-KGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFEF 87
R+ D + G I+ L+ LG + D+E+ + E D+DGDG ++ EF
Sbjct: 90 RVFDKDGNGYISAAELRHVXTNLGEK-LTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 58 GLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILM 91
G + D E L GD DGDGA+ E+ L+
Sbjct: 74 GARALTDAETKAFLKAGDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 58 GLNDMMDDEIVCMLSEGDLDGDGALSQFEFCILM 91
G + D E L GD DGDGA+ E+ L+
Sbjct: 73 GARALTDAETKAFLKAGDSDGDGAIGVEEWVALV 106
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 7 DHDFEDYFPSMIKRLGAEGFISELCYGFQRL-MDGEKGLITFESLKRNSLLLGLN---DM 62
D D E P + L + ++L Y FQ +D + + E L+ L++G+ +
Sbjct: 95 DEDTETQDPKKPEPLNSRR--NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQ 152
Query: 63 MDDEIVCMLSEGDLDGDGALSQFEFC 88
+++ + E D DGDGA+S EF
Sbjct: 153 LENIADRTVQEADEDGDGAVSFVEFT 178
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCILMVR 93
F +M R
Sbjct: 69 FLTMMAR 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 25.4 bits (54), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 25.4 bits (54), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
ISE F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F LM R
Sbjct: 68 FLNLMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|4DI0|A Chain A, The Structure Of Rubrerythrin From Burkholderia
Pseudomallei
pdb|4DI0|B Chain B, The Structure Of Rubrerythrin From Burkholderia
Pseudomallei
Length = 144
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 8 HDFEDYFPSMIKRLGAEGFISELCYGFQRLMDGEK 42
H++ D +P M K EGF E+ F+ L E+
Sbjct: 96 HEYTDMYPGMAKTARDEGF-EEIANWFETLAKAER 129
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 ISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGALSQFE 86
I+E F G IT + L LG N + E+ M++E D DG+G + E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCILMVR 93
F +M R
Sbjct: 68 FLTMMAR 74
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 23 AEGFISELCYGFQRLMDGEKGLITFESLKRNSLLLGLNDMMDDEIVCMLSEGDLDGDGAL 82
+E I+E F G I+ + L +LG N +E+ ++ E D DG G +
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTI 62
Query: 83 SQFEFCILMVR 93
EF ++MVR
Sbjct: 63 DFEEFLVMMVR 73
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.142 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,602,641
Number of Sequences: 62578
Number of extensions: 130772
Number of successful extensions: 572
Number of sequences better than 100.0: 165
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 226
length of query: 119
length of database: 14,973,337
effective HSP length: 81
effective length of query: 38
effective length of database: 9,904,519
effective search space: 376371722
effective search space used: 376371722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)