BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033458
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana
GN=LTP3 PE=3 SV=1
Length = 115
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 1 MAAASLKFVCLVGLLLVVNVATFARVYGAGECGKSSPDNEAIKLAPCATAAQDEKASVSG 60
MA A F CLV + V A V A CG A LAPCAT + V
Sbjct: 1 MAFALRFFTCLV-----LTVCIVASVDAAISCG-----TVAGSLAPCATY-LSKGGLVPP 49
Query: 61 SCCAQVKRMGQNPKCL------CAVLLSDTAKASGVNPQVAITIPKRCNFA 105
SCCA VK + K C + S SG+NP +A +P +C +
Sbjct: 50 SCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVS 100
>sp|O04403|NLT22_PARJU Probable non-specific lipid-transfer protein 2 OS=Parietaria
judaica PE=1 SV=1
Length = 133
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 28 GAGECGKSSPDNEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCL------CAVLL 81
G G CGK + PC + E+ S SCC+ K++ + K C ++
Sbjct: 31 GEGPCGKV-----VHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIV 85
Query: 82 SDTAKASGVNPQVAITIPKRCNFAN 106
+ T SG+ ++ +PK+C
Sbjct: 86 AATKGISGIKNELVAEVPKKCGITT 110
>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2
SV=1
Length = 151
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 6 LKFVCLVGLLLVVNVATFARVYGAG-ECGKSSPDNEAIKLAPCATAAQDEKASVSGSCCA 64
+KF +LL+V ++ R+ G C +LAPC K V CC
Sbjct: 5 MKFFSFYVVLLLVAASSGMRINGQSVSCLN--------QLAPCLNYLNGTK-EVPQVCCN 55
Query: 65 QVKR-MGQNPKCLCAVL---LSDTAKASGVNPQVAITIPKRCNFANRPV 109
+K + NP+CLC ++ S A+ +G++ A +P RC P+
Sbjct: 56 PLKSVIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPI 104
>sp|Q8W453|DIR1_ARATH Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana
GN=DIR1 PE=1 SV=1
Length = 102
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 51 AQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRPV 109
+++ S S CC ++ + CLC S + GV+P++A +PK+C AN P
Sbjct: 45 SKENPTSPSQPCCTALQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPT 101
>sp|P55958|NLT21_PARJU Probable non-specific lipid-transfer protein 2 OS=Parietaria
judaica PE=1 SV=1
Length = 133
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 32 CGKSSPDNEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCL------CAVLLSDTA 85
CGK D + PC + E+ S CC+ K++ + K C ++ T
Sbjct: 35 CGKVVQD-----IMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATK 89
Query: 86 KASGVNPQVAITIPKRCNFAN 106
SG+ ++ +PK+C+
Sbjct: 90 GISGIKNELVAEVPKKCDIKT 110
>sp|Q11HV9|ISPDF_MESSB Bifunctional enzyme IspD/IspF OS=Mesorhizobium sp. (strain BNC1)
GN=ispDF PE=3 SV=1
Length = 408
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 66 VKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANR-PVGYKCGP 115
++ +G++ L A+ +SDT K SGVN + T+P+ FA + P G+ P
Sbjct: 132 IEAVGEDSGALPALPVSDTLKRSGVNGIITGTVPRDGLFAAQTPQGFPFRP 182
>sp|Q95LZ5|TTC16_MACFA Tetratricopeptide repeat protein 16 OS=Macaca fascicularis GN=TTC16
PE=2 SV=1
Length = 872
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 40 EAIKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIP 99
+A+ + A Q EKA C A + + Q+P CL L+++ K N V I
Sbjct: 154 DALNVFSHAAELQPEKACFRYRCMACLLALEQHPACLS--LITEELKQDTTNADVYILRA 211
Query: 100 KRCNFANRP 108
+ NF +P
Sbjct: 212 RLYNFLQKP 220
>sp|O65091|NLTP4_ORYSJ Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp.
japonica GN=Os12g0114500 PE=3 SV=2
Length = 119
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 44 LAPCATAAQDEKASVSGSCCAQVKRMGQ------NPKCLCAVLLSDTAKASGVNPQVAIT 97
LAPC A ++ +G CC V+ + + + CA L T+ G+ P +
Sbjct: 37 LAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAG 96
Query: 98 IPKRCNF 104
IP +C
Sbjct: 97 IPSKCGV 103
>sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1
Length = 120
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 41 AIKLAPCATAAQDEKASVSGSCCAQVK------RMGQNPKCLCAVLLSDTAKASGVNPQV 94
A +APC + A+ + + S CC+ V+ R + + C L + A SG+N
Sbjct: 35 ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGN 94
Query: 95 AITIPKRCNFA 105
A +IP +C +
Sbjct: 95 AASIPSKCGVS 105
>sp|B1MBD0|KATG_MYCA9 Catalase-peroxidase OS=Mycobacterium abscessus (strain ATCC 19977 /
DSM 44196) GN=katG PE=3 SV=1
Length = 738
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 16 LVVNVATFARVYGAGECGKSSPDNEAIKL 44
L+V TF + +GAG+ G PD EA L
Sbjct: 267 LIVGGHTFGKTHGAGDAGLVGPDPEAAPL 295
>sp|A0AT28|NLTP1_LENCU Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1
Length = 118
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 4 ASLKFVCLVGLLLVVNVATFARVYGAGECGKSSPDNEAIKLAPCATAAQDEKASVSGSCC 63
ASL+ CLV L+ +V V + A CG S L PC T + S CC
Sbjct: 2 ASLRVSCLVALMCMV-VISAPMAEAAISCGTVSG-----ALVPCLTYLKGGPGP-SPQCC 54
Query: 64 AQVKRMGQ------NPKCLCAVLLSDTAKASGVNPQVAITIPKRCNF 104
VKR+ + + C L S SG+ P T+P +C
Sbjct: 55 GGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGV 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,069,142
Number of Sequences: 539616
Number of extensions: 1303022
Number of successful extensions: 3115
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3104
Number of HSP's gapped (non-prelim): 45
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)