Query 033458
Match_columns 119
No_of_seqs 123 out of 1022
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 02:30:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033458.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033458hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04660 nsLTP_like nsLTP_like: 99.7 1.9E-17 4.1E-22 104.4 4.9 66 42-113 6-73 (73)
2 PF14368 LTP_2: Probable lipid 99.6 2.9E-17 6.4E-22 107.2 0.8 69 42-113 24-96 (96)
3 cd01959 nsLTP2 nsLTP2: Non-spe 99.6 1.6E-15 3.4E-20 94.1 4.5 61 42-108 4-64 (66)
4 cd01960 nsLTP1 nsLTP1: Non-spe 99.6 1.1E-15 2.4E-20 99.5 3.4 74 40-113 6-88 (89)
5 cd00010 AAI_LTSS AAI_LTSS: Alp 99.6 2.2E-15 4.7E-20 91.9 4.0 61 44-104 1-63 (63)
6 smart00499 AAI Plant lipid tra 99.2 2.8E-11 6E-16 75.1 5.1 67 41-109 5-76 (79)
7 PF00234 Tryp_alpha_amyl: Prot 98.9 2.5E-11 5.3E-16 78.5 -4.6 68 42-113 13-90 (90)
8 PF14547 Hydrophob_seed: Hydro 97.2 0.00013 2.9E-09 47.3 1.2 72 42-114 7-85 (85)
9 cd01958 HPS_like HPS_like: Hyd 96.9 0.00098 2.1E-08 43.2 3.2 70 42-113 9-85 (85)
10 PF07172 GRP: Glycine rich pro 84.5 0.96 2.1E-05 29.7 2.4 15 3-17 1-15 (95)
11 cd00261 AAI_SS AAI_SS: Alpha-A 62.6 2.3 5E-05 27.9 -0.2 62 42-105 13-103 (110)
12 PF05617 Prolamin_like: Prolam 52.2 14 0.0003 22.2 2.1 32 45-78 10-46 (70)
13 PF10868 DUF2667: Protein of u 33.7 23 0.0005 23.1 1.0 8 72-79 72-79 (90)
No 1
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.70 E-value=1.9e-17 Score=104.45 Aligned_cols=66 Identities=27% Similarity=0.574 Sum_probs=55.9
Q ss_pred cccccChHhhhCCC--CCCcHHHHHHHHhcCCCCCcccccccccccccCCCCHHHHhhhhhhCCCCCCCCCCCC
Q 033458 42 IKLAPCATAAQDEK--ASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC~~yv~~~~--~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~P~~~~C 113 (119)
..|.||++|+++++ .+||+.||+++|++ +..|+|.+++.... ..||.++|.+||++||++ +|+ ++|
T Consensus 6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~--~~~C~C~~~~~~~~--~~i~~~~a~~Lp~~Cgv~-~p~-~~C 73 (73)
T cd04660 6 DLLAECQPYVTGPNPPPPPSRECCAALRRA--DLPCLCRYKTSLVL--QIIDPDKAVYLPAKCGLP-LPP-SSC 73 (73)
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHcC--CcCCEeeccCCCcc--cccCHHHHHHHHHHcCCC-CCC-CCC
Confidence 78899999999776 46899999999996 67799999865322 259999999999999999 677 887
No 2
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.64 E-value=2.9e-17 Score=107.21 Aligned_cols=69 Identities=32% Similarity=0.664 Sum_probs=47.0
Q ss_pred cccccC---hHhhhCCCCCCcHHHHHHHHhcC-CCCCcccccccccccccCCCCHHHHhhhhhhCCCCCCCCCCCC
Q 033458 42 IKLAPC---ATAAQDEKASVSGSCCAQVKRMG-QNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC---~~yv~~~~~~Ps~~CC~~vk~l~-~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~P~~~~C 113 (119)
.+|.|| ..|++++ .+||+.||+++|++. ++..|+|..+++.....++||.+|+..||++||++ .|+ ++|
T Consensus 24 ~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~-~~~-~~C 96 (96)
T PF14368_consen 24 NSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVP-VPP-SKC 96 (96)
T ss_dssp CCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS--S-----
T ss_pred HHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCC-CCC-CCC
Confidence 446666 7888744 589999999999974 68999999998765345689999999999999999 566 777
No 3
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.59 E-value=1.6e-15 Score=94.14 Aligned_cols=61 Identities=30% Similarity=0.579 Sum_probs=53.7
Q ss_pred cccccChHhhhCCCCCCcHHHHHHHHhcCCCCCcccccccccccccCCCCHHHHhhhhhhCCCCCCC
Q 033458 42 IKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRP 108 (119)
Q Consensus 42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~P 108 (119)
.+|.+|++|++++. +||++||+.+|+ +..|||++++++...++ ||.++|++||++||++ +|
T Consensus 4 ~~L~~C~~ai~~~~-~Ps~~CC~~Lk~---~~~CLC~y~~~p~l~~~-i~~~~A~~l~~~Cgv~-~P 64 (66)
T cd01959 4 TQLSPCLPAILGGS-PPSAACCAKLKE---QQSCLCQYAKNPSLKQY-VNSPNARKVLAACGVP-YP 64 (66)
T ss_pred hhcccCHHHHhCCC-CCCHHHHHHHhc---CCCCeeeeecCccHHhh-cCcHHHHHHHHHcCCC-CC
Confidence 78999999998764 799999999999 55999999987766655 8999999999999999 56
No 4
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.58 E-value=1.1e-15 Score=99.46 Aligned_cols=74 Identities=30% Similarity=0.543 Sum_probs=55.6
Q ss_pred cccccccChHhhhCCCCCCcHHHHHHHHhcCC------CCCcccccccccccccCCCCHHHHhhhhhhCCCCC-CC--CC
Q 033458 40 EAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ------NPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFAN-RP--VG 110 (119)
Q Consensus 40 ~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~------~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~-~P--~~ 110 (119)
+...|.||++|+++++..|+++||+++++++. +..|+|..+.+......+||.++|++||++||++. +| ..
T Consensus 6 v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~~~i~~~ 85 (89)
T cd01960 6 VTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIPYPISPS 85 (89)
T ss_pred HHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCCCCCCCC
Confidence 34889999999998777899999999999862 33455555544333333599999999999999996 44 44
Q ss_pred CCC
Q 033458 111 YKC 113 (119)
Q Consensus 111 ~~C 113 (119)
+.|
T Consensus 86 ~dC 88 (89)
T cd01960 86 TDC 88 (89)
T ss_pred CCC
Confidence 555
No 5
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.57 E-value=2.2e-15 Score=91.91 Aligned_cols=61 Identities=33% Similarity=0.709 Sum_probs=52.4
Q ss_pred cccChHhhhCCCCCCcHHHHHHHHhcC-CCCCcccccccccccccCCC-CHHHHhhhhhhCCC
Q 033458 44 LAPCATAAQDEKASVSGSCCAQVKRMG-QNPKCLCAVLLSDTAKASGV-NPQVAITIPKRCNF 104 (119)
Q Consensus 44 L~pC~~yv~~~~~~Ps~~CC~~vk~l~-~~~~ClC~~~~~~~~~~~~i-n~~~a~~lP~~Cg~ 104 (119)
|.||++|+++++..||++||+++++++ .+..|+|..+++.....+++ |.+++..||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 579999999876789999999999986 57899999998765554555 79999999999996
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.20 E-value=2.8e-11 Score=75.13 Aligned_cols=67 Identities=28% Similarity=0.585 Sum_probs=53.5
Q ss_pred ccccccChHhhhCC--CCCCcHHHHHHHHhcCCCCCcccccccccccccCC---CCHHHHhhhhhhCCCCCCCC
Q 033458 41 AIKLAPCATAAQDE--KASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASG---VNPQVAITIPKRCNFANRPV 109 (119)
Q Consensus 41 ~~~L~pC~~yv~~~--~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~---in~~~a~~lP~~Cg~~~~P~ 109 (119)
+..+.+|.+|+++. ...|+.+||++++++. +..|+|..+......... ++..++.+||+.||+. .|.
T Consensus 5 ~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~-~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~-~~~ 76 (79)
T smart00499 5 LLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN-SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVP-PPY 76 (79)
T ss_pred hhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc-ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCC-CCC
Confidence 46677999999876 4578899999999975 788999998754333322 5999999999999999 453
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.90 E-value=2.5e-11 Score=78.50 Aligned_cols=68 Identities=26% Similarity=0.643 Sum_probs=54.3
Q ss_pred cccccChHhhhCCCCCCcHHHHHHHHhcCCCCCccccccccccccc----------CCCCHHHHhhhhhhCCCCCCCCCC
Q 033458 42 IKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKA----------SGVNPQVAITIPKRCNFANRPVGY 111 (119)
Q Consensus 42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~----------~~in~~~a~~lP~~Cg~~~~P~~~ 111 (119)
..+.+|.+|++++...|+..||++|+++ +..|.|..+....... .+++..+|.+||+.||++ +|. +
T Consensus 13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l--~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~-~~~-~ 88 (90)
T PF00234_consen 13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL--DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVS-PPY-T 88 (90)
T ss_dssp SHHHGGHHHHTTSSSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSS-SSS-S
T ss_pred ccccccHHHHhcccccchHHHhHHHHHH--hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCC-CCC-C
Confidence 4578999999987657999999999998 8999999987533321 257899999999999999 454 4
Q ss_pred CC
Q 033458 112 KC 113 (119)
Q Consensus 112 ~C 113 (119)
.|
T Consensus 89 ~C 90 (90)
T PF00234_consen 89 DC 90 (90)
T ss_dssp -G
T ss_pred CC
Confidence 44
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=97.23 E-value=0.00013 Score=47.27 Aligned_cols=72 Identities=21% Similarity=0.467 Sum_probs=49.6
Q ss_pred cccccChHhhh----CCCCCCcHHHHHHHHhcCC--CCCcccccccccccccCCCCHH-HHhhhhhhCCCCCCCCCCCCC
Q 033458 42 IKLAPCATAAQ----DEKASVSGSCCAQVKRMGQ--NPKCLCAVLLSDTAKASGVNPQ-VAITIPKRCNFANRPVGYKCG 114 (119)
Q Consensus 42 ~~L~pC~~yv~----~~~~~Ps~~CC~~vk~l~~--~~~ClC~~~~~~~~~~~~in~~-~a~~lP~~Cg~~~~P~~~~C~ 114 (119)
.+|.-|.+.+. ..+.++...||+-++.+.+ -..|+|..++.......++|.+ ....|-..||.. +|.||+|.
T Consensus 7 lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~-~p~gf~C~ 85 (85)
T PF14547_consen 7 LKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKT-VPSGFTCP 85 (85)
T ss_pred hhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCc-CcCCCcCC
Confidence 57778888771 1123577899999999963 3669998877544332233332 445677889999 79999994
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=96.94 E-value=0.00098 Score=43.20 Aligned_cols=70 Identities=23% Similarity=0.537 Sum_probs=47.7
Q ss_pred cccccChHhhhCC----CCCCcHHHHHHHHhcC--CCCCcccccccccccccCCCCHHHH-hhhhhhCCCCCCCCCCCC
Q 033458 42 IKLAPCATAAQDE----KASVSGSCCAQVKRMG--QNPKCLCAVLLSDTAKASGVNPQVA-ITIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC~~yv~~~----~~~Ps~~CC~~vk~l~--~~~~ClC~~~~~~~~~~~~in~~~a-~~lP~~Cg~~~~P~~~~C 113 (119)
.+|.-|..-+..- +.+|..+||+-++.+. +-..|+|-.++.+.... ++|..-. .-|-..||.. .|.||+|
T Consensus 9 lkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi-~~~~pv~l~llln~CGk~-~P~gf~C 85 (85)
T cd01958 9 LKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGI-SINIPVALSLLLNSCGRN-VPPGFTC 85 (85)
T ss_pred HHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCc-ccccChhHHHHHHHHcCc-CCCCCcC
Confidence 5677788766211 2367789999999986 34779999887543322 2333333 4455679999 7999998
No 10
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=84.53 E-value=0.96 Score=29.75 Aligned_cols=15 Identities=40% Similarity=0.266 Sum_probs=8.1
Q ss_pred cchhHHHHHHHHHHH
Q 033458 3 AASLKFVCLVGLLLV 17 (119)
Q Consensus 3 m~~~~~~~~~~~~~~ 17 (119)
|++++|+.+.+++++
T Consensus 1 MaSK~~llL~l~LA~ 15 (95)
T PF07172_consen 1 MASKAFLLLGLLLAA 15 (95)
T ss_pred CchhHHHHHHHHHHH
Confidence 676665555544433
No 11
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=62.60 E-value=2.3 Score=27.92 Aligned_cols=62 Identities=21% Similarity=0.448 Sum_probs=41.1
Q ss_pred cccccChHhhhCC---CC-----------CCcHHHHHHHHhcCCCCCcccccccccccc---c--------C----CCCH
Q 033458 42 IKLAPCATAAQDE---KA-----------SVSGSCCAQVKRMGQNPKCLCAVLLSDTAK---A--------S----GVNP 92 (119)
Q Consensus 42 ~~L~pC~~yv~~~---~~-----------~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~---~--------~----~in~ 92 (119)
..|.+|..|+.-. .. .....||+.++.+ +..|.|..+...... . . ..-.
T Consensus 13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i--~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (110)
T cd00261 13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI--PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMR 90 (110)
T ss_pred ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC--cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHH
Confidence 4578999998311 11 1125699999998 788999888521100 0 0 1234
Q ss_pred HHHhhhhhhCCCC
Q 033458 93 QVAITIPKRCNFA 105 (119)
Q Consensus 93 ~~a~~lP~~Cg~~ 105 (119)
..|.+||..||+.
T Consensus 91 ~~a~~Lp~~C~~~ 103 (110)
T cd00261 91 QAAQNLPSMCNLY 103 (110)
T ss_pred HHHHhhchhcCCC
Confidence 6889999999998
No 12
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=52.18 E-value=14 Score=22.19 Aligned_cols=32 Identities=22% Similarity=0.590 Sum_probs=22.3
Q ss_pred ccChHhh----h-CCCCCCcHHHHHHHHhcCCCCCcccc
Q 033458 45 APCATAA----Q-DEKASVSGSCCAQVKRMGQNPKCLCA 78 (119)
Q Consensus 45 ~pC~~yv----~-~~~~~Ps~~CC~~vk~l~~~~~ClC~ 78 (119)
..|...+ . |.....+++||.++..+ ...|.=.
T Consensus 10 ~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~--g~~C~~~ 46 (70)
T PF05617_consen 10 PGCGDEIFNSFFNGNKKNIGPECCKAINKM--GKDCHPA 46 (70)
T ss_pred cchHHHHHHHHHcCCCCCCChHHHHHHHHH--hHhHHHH
Confidence 3465554 3 33257899999999997 6777665
No 13
>PF10868 DUF2667: Protein of unknown function (DUF2667); InterPro: IPR022618 This family of proteins with unknown function appears to be restricted to Arabidopsis thaliana.
Probab=33.69 E-value=23 Score=23.15 Aligned_cols=8 Identities=25% Similarity=0.887 Sum_probs=5.3
Q ss_pred CCCccccc
Q 033458 72 NPKCLCAV 79 (119)
Q Consensus 72 ~~~ClC~~ 79 (119)
+..|.|-+
T Consensus 72 ~~~C~Cc~ 79 (90)
T PF10868_consen 72 DGVCYCCY 79 (90)
T ss_pred CcEEEEec
Confidence 46787755
Done!