Query         033458
Match_columns 119
No_of_seqs    123 out of 1022
Neff          7.2 
Searched_HMMs 29240
Date          Mon Mar 25 03:18:47 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033458hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2rkn_A DIR1 protein, AT5G48485  99.7   1E-18 3.5E-23  110.4   1.2   74   29-110     2-76  (77)
  2 2ljo_A Non-specific lipid-tran  99.7 1.4E-18 4.9E-23  113.5  -1.7   78   39-117     6-92  (93)
  3 1n89_A Lipid transfer protein;  99.6 5.5E-17 1.9E-21  100.0   2.2   61   42-108     5-65  (67)
  4 1afh_A Maize nonspecific lipid  99.6 1.7E-17 5.8E-22  108.3  -0.5   76   39-116     6-92  (93)
  5 1siy_A LTP 1, NS-LTP1, nonspec  99.6 5.5E-17 1.9E-21  105.4   1.2   77   31-116     2-90  (91)
  6 1l6h_A LTP2, non-specific lipi  99.6 3.3E-17 1.1E-21  101.5  -0.1   64   42-114     6-69  (69)
  7 1bwo_A NS-LTP1, nonspecific li  99.6 4.8E-17 1.6E-21  105.6  -0.2   73   39-115     5-89  (90)
  8 2alg_A Non-specific lipid tran  99.6   4E-17 1.4E-21  106.3  -1.0   73   40-116     7-91  (92)
  9 1t12_A LTP 1, nonspecific lipi  99.6 8.2E-17 2.8E-21  104.7  -0.3   73   39-116     6-90  (91)
 10 1hyp_A Hydrophobic protein fro  97.0  0.0003   1E-08   44.1   2.2   66   43-114    10-78  (80)
 11 3ob4_A Conglutin, maltose ABC   93.7  0.0055 1.9E-07   48.9  -2.0   50   60-110   429-487 (500)
 12 1s6d_A Albumin 8; all helix, f  93.3    0.12   4E-06   33.6   4.3   60   44-105    21-97  (103)
 13 1pnb_B Napin BNIB; napin IA an  90.5   0.029   1E-06   34.4  -1.0   47   57-105     9-65  (75)
 14 2ds2_B Sweet protein mabinlin-  89.2    0.14 4.7E-06   31.2   1.3   44   60-105     8-62  (72)
 15 1hss_A 0.19 alpha-amylase inhi  89.2   0.068 2.3E-06   36.0  -0.1   67   42-111    15-108 (124)
 16 2lvf_A 2S albumin; allergen, c  89.0   0.073 2.5E-06   35.2  -0.1   62   42-105    16-101 (114)
 17 1w2q_A Conglutin, ARA H 6; all  86.7    0.42 1.5E-05   32.1   2.6   64   42-105    23-112 (127)
 18 1psy_A 2S albumin, RICC3; albu  86.6    0.27 9.2E-06   32.9   1.6   61   42-104    25-116 (125)
 19 1b1u_A Protein (alpha-amylase/  84.3    0.27 9.2E-06   32.9   0.7   67   42-111    15-111 (122)
 20 1bea_A Bifunctional amylase/se  83.8     0.7 2.4E-05   31.0   2.6   69   42-113    15-115 (127)
 21 1sm7_A Recombinant IB pronapin  82.0     0.3   1E-05   31.7   0.2   61   43-105    14-99  (109)

No 1  
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.71  E-value=1e-18  Score=110.37  Aligned_cols=74  Identities=31%  Similarity=0.585  Sum_probs=60.9

Q ss_pred             ccCCCCCCCcccccccccChHhhhCC-CCCCcHHHHHHHHhcCCCCCcccccccccccccCCCCHHHHhhhhhhCCCCCC
Q 033458           29 AGECGKSSPDNEAIKLAPCATAAQDE-KASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANR  107 (119)
Q Consensus        29 ~~~C~~~~~~~~~~~L~pC~~yv~~~-~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~  107 (119)
                      +.+|+++.     ..|.||++|++++ ..+||++||++||+.  |..|+|.+++++...+++||.++|++||++||++ +
T Consensus         2 ~~~C~~~~-----~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~--~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~-~   73 (77)
T 2rkn_A            2 IDLCGMSQ-----DELNECKPAVSKENPTSPSQPCCTALQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLA-N   73 (77)
T ss_dssp             CCBTTBCH-----HHHHHHGGGGBSSSCCCCCHHHHHHHTTC--CHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCS-C
T ss_pred             cchHHhHH-----HhHhhCHHHHcCCCCCCCCHHHHHHHHhc--CcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCC-C
Confidence            35677543     8899999999974 457999999999973  8899999987655555689999999999999999 5


Q ss_pred             CCC
Q 033458          108 PVG  110 (119)
Q Consensus       108 P~~  110 (119)
                      |.+
T Consensus        74 p~~   76 (77)
T 2rkn_A           74 APT   76 (77)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            643


No 2  
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.67  E-value=1.4e-18  Score=113.53  Aligned_cols=78  Identities=22%  Similarity=0.424  Sum_probs=61.4

Q ss_pred             ccccccccChHhhhCCCCCCcHHHHHHHHhcCC------CCCcccccccccccccCCCCHHHHhhhhhhCCCCC-CC--C
Q 033458           39 NEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ------NPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFAN-RP--V  109 (119)
Q Consensus        39 ~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~------~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~-~P--~  109 (119)
                      +++..|.||++|++|++ .|++.||+++|++++      |..|+|.-+++......+||.++|.+||++||+++ +|  +
T Consensus         6 ~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p~~Is~   84 (93)
T 2ljo_A            6 AVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKIST   84 (93)
T ss_dssp             HHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCSSCCST
T ss_pred             HHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCCCCCCC
Confidence            34588999999999865 699999999999962      45677777765444445899999999999999995 33  6


Q ss_pred             CCCCCCcc
Q 033458          110 GYKCGPYT  117 (119)
Q Consensus       110 ~~~C~~~~  117 (119)
                      .++|+.++
T Consensus        85 ~~dC~~v~   92 (93)
T 2ljo_A           85 TTNCNTVK   92 (93)
T ss_dssp             TCCGGGCC
T ss_pred             CCCCCCCC
Confidence            78888765


No 3  
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.63  E-value=5.5e-17  Score=100.03  Aligned_cols=61  Identities=26%  Similarity=0.490  Sum_probs=53.0

Q ss_pred             cccccChHhhhCCCCCCcHHHHHHHHhcCCCCCcccccccccccccCCCCHHHHhhhhhhCCCCCCC
Q 033458           42 IKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRP  108 (119)
Q Consensus        42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~P  108 (119)
                      .+|.||++|+++++ +||++||++||+   +..|+|+++++..... +||.++|++||++||++ +|
T Consensus         5 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~---~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~-~P   65 (67)
T 1n89_A            5 SQLAVCASAILSGA-KPSGECCGNLRA---QQGCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLA-VP   65 (67)
T ss_dssp             STTHHHHHHHTTCC-CCCHHHHHHHHH---HSSHHHHGGGCSTTHH-HHTCHHHHHHHHHHTSC-CS
T ss_pred             hhcccCHHHHcCCC-CCCHHHHHhhCC---CCCCCCccccCccccc-ccCHHHHHHHHHHcCCC-CC
Confidence            77899999999875 799999999999   6899999987654433 59999999999999999 56


No 4  
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.63  E-value=1.7e-17  Score=108.28  Aligned_cols=76  Identities=26%  Similarity=0.545  Sum_probs=59.4

Q ss_pred             ccccccccChHhhhCCCCCCcHHHHHHHHhcCC--------CCCcccccccccccccCCCCHHHHhhhhhhCCCCC-CC-
Q 033458           39 NEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ--------NPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFAN-RP-  108 (119)
Q Consensus        39 ~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~--------~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~-~P-  108 (119)
                      ++...|.||++|+++++..|+++||++||++++        +..|+|.+...  ....+||.++|++||++||+++ +| 
T Consensus         6 ~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~--~~~~~in~~~A~~LP~~C~v~~p~~i   83 (93)
T 1afh_A            6 QVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAA--AGVSGLNAGNAASIPSKCGVSIPYTI   83 (93)
T ss_dssp             HHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHH--TTSTTCCHHHHHHHHHHHHCCCSSCC
T ss_pred             HHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccc--ccccCcCHHHHHHHHHHcCCCCCCCC
Confidence            345889999999998776799999999999851        26899986432  1222799999999999999986 33 


Q ss_pred             -CCCCCCCc
Q 033458          109 -VGYKCGPY  116 (119)
Q Consensus       109 -~~~~C~~~  116 (119)
                       .+++|..+
T Consensus        84 s~~~dC~~v   92 (93)
T 1afh_A           84 STSTDCSRV   92 (93)
T ss_dssp             STTCCSSSC
T ss_pred             CCCCCCccC
Confidence             67778754


No 5  
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.62  E-value=5.5e-17  Score=105.45  Aligned_cols=77  Identities=30%  Similarity=0.570  Sum_probs=60.4

Q ss_pred             CCCCCCCcccccccccChHhhhCCCCCCcHHHHHHHHhcCC--------CCCcccccccccccccC-CCCHHHHhhhhhh
Q 033458           31 ECGKSSPDNEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ--------NPKCLCAVLLSDTAKAS-GVNPQVAITIPKR  101 (119)
Q Consensus        31 ~C~~~~~~~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~--------~~~ClC~~~~~~~~~~~-~in~~~a~~lP~~  101 (119)
                      +|+.+     ...|.||++|+++++. |+++||++||++++        +..|+|.+  + ....+ +||.++|++||++
T Consensus         2 ~C~~v-----~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k--~-~~~~~~~in~~~A~~LP~~   72 (91)
T 1siy_A            2 TCGQV-----QGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCLK--A-AAGAVRGINPNNAEALPGK   72 (91)
T ss_dssp             CTTTT-----HHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHH--H-HTTCCSSCCHHHHHHHHHH
T ss_pred             CHHHH-----HHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcccC--C-cccccCCcCHHHHHHHHHH
Confidence            46654     4889999999998775 99999999999852        35899974  2 23444 7999999999999


Q ss_pred             CCCCC-CC--CCCCCCCc
Q 033458          102 CNFAN-RP--VGYKCGPY  116 (119)
Q Consensus       102 Cg~~~-~P--~~~~C~~~  116 (119)
                      ||+++ +|  .+++|..+
T Consensus        73 Cgv~~p~~is~~~dC~~v   90 (91)
T 1siy_A           73 CGVNIPYKISTSTNCNSI   90 (91)
T ss_dssp             HTCCCSSCSCTTSCSSTT
T ss_pred             cCCCCCCCCCCCCCCccC
Confidence            99985 33  67788764


No 6  
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.62  E-value=3.3e-17  Score=101.54  Aligned_cols=64  Identities=22%  Similarity=0.452  Sum_probs=54.9

Q ss_pred             cccccChHhhhCCCCCCcHHHHHHHHhcCCCCCcccccccccccccCCCCHHHHhhhhhhCCCCCCCCCCCCC
Q 033458           42 IKLAPCATAAQDEKASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKASGVNPQVAITIPKRCNFANRPVGYKCG  114 (119)
Q Consensus        42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~in~~~a~~lP~~Cg~~~~P~~~~C~  114 (119)
                      .+|.||++|+++++ +||++||++||+   +..|+|+++++..... +||.++|++||++||++ +|   +||
T Consensus         6 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~---~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~-~P---~C~   69 (69)
T 1l6h_A            6 GQLTVCTGAIAGGA-RPTAACCSSLRA---QQGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIA-LP---TCH   69 (69)
T ss_dssp             TTHHHHHHHHTTCC-STTHHHHHHHHH---HHHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSC-SC---CCC
T ss_pred             hhcccCHHHHcCCC-CCCHHHHHhhCC---CCCCCCccccCccccc-ccCHHHHHHHHHHcCCC-CC---CCC
Confidence            77899999999875 799999999999   6899999987654443 59999999999999999 56   565


No 7  
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.61  E-value=4.8e-17  Score=105.58  Aligned_cols=73  Identities=25%  Similarity=0.486  Sum_probs=57.0

Q ss_pred             ccccccccChHhhhCCCCCCcHHHHHHHHhcCC--------CCCcccccccccccccC-CCCHHHHhhhhhhCCCCC-CC
Q 033458           39 NEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ--------NPKCLCAVLLSDTAKAS-GVNPQVAITIPKRCNFAN-RP  108 (119)
Q Consensus        39 ~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~--------~~~ClC~~~~~~~~~~~-~in~~~a~~lP~~Cg~~~-~P  108 (119)
                      ++...|.||++|+++++. |+++||++||++++        +..|+|.+.  . ...+ +||.++|++||++||++. +|
T Consensus         5 ~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~--~-~~~~~~in~~~A~~LP~~C~v~~p~~   80 (90)
T 1bwo_A            5 HVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKG--I-ARGIHNLNEDNARSIPPKCGVNLPYT   80 (90)
T ss_dssp             HHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHH--H-HTTCTTCCHHHHHTHHHHHTCCCSSC
T ss_pred             HHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCccC--c-hhccCCcCHHHHHHHHHHcCCCCCCC
Confidence            345789999999998775 99999999999851        468999653  2 2333 799999999999999985 33


Q ss_pred             --CCCCCCC
Q 033458          109 --VGYKCGP  115 (119)
Q Consensus       109 --~~~~C~~  115 (119)
                        .+++|..
T Consensus        81 is~~~dC~~   89 (90)
T 1bwo_A           81 ISLNIDCSR   89 (90)
T ss_dssp             CCTTCCGGG
T ss_pred             CCCCCCCCC
Confidence              5666653


No 8  
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.60  E-value=4e-17  Score=106.30  Aligned_cols=73  Identities=26%  Similarity=0.594  Sum_probs=57.5

Q ss_pred             cccccccChHhhhCCCCCCcHHHHHHHHhcC--------CCCCcccccccccccccC-CCCHHHHhhhhhhCCCCC-CC-
Q 033458           40 EAIKLAPCATAAQDEKASVSGSCCAQVKRMG--------QNPKCLCAVLLSDTAKAS-GVNPQVAITIPKRCNFAN-RP-  108 (119)
Q Consensus        40 ~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~--------~~~~ClC~~~~~~~~~~~-~in~~~a~~lP~~Cg~~~-~P-  108 (119)
                      +...|.||++|+++++ +|+++||++||+++        .+..|+|.+...   ..+ +||.++|++||++||+++ +| 
T Consensus         7 v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~---~~~~~in~~~A~~LP~~Cgv~~p~~i   82 (92)
T 2alg_A            7 VSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS---ASVPGVNPNNAAALPGKCGVSIPYKI   82 (92)
T ss_dssp             HHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---HHSTTCCHHHHHHHHHHTTCCCSSCS
T ss_pred             HHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc---cccCccChHHHHHHHHHcCCCCCCCC
Confidence            4478999999999776 58889999999985        137899987432   223 799999999999999996 33 


Q ss_pred             -CCCCCCCc
Q 033458          109 -VGYKCGPY  116 (119)
Q Consensus       109 -~~~~C~~~  116 (119)
                       .+++|..+
T Consensus        83 s~~~dC~~v   91 (92)
T 2alg_A           83 SASTNCATV   91 (92)
T ss_dssp             STTSCGGGC
T ss_pred             CCCCCCccC
Confidence             66777643


No 9  
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.59  E-value=8.2e-17  Score=104.70  Aligned_cols=73  Identities=25%  Similarity=0.474  Sum_probs=57.8

Q ss_pred             ccccccccChHhhhCCCCCCcHHHHHHHHhcCC--------CCCcccccccccccccC-CCCHHHHhhhhhhCCCCC-CC
Q 033458           39 NEAIKLAPCATAAQDEKASVSGSCCAQVKRMGQ--------NPKCLCAVLLSDTAKAS-GVNPQVAITIPKRCNFAN-RP  108 (119)
Q Consensus        39 ~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~--------~~~ClC~~~~~~~~~~~-~in~~~a~~lP~~Cg~~~-~P  108 (119)
                      ++...|.||++|+++++. |+ +||++||+++.        +..|+|.+.   ....+ +||.++|++||++||+++ +|
T Consensus         6 ~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~---~~~~~~~in~~~A~~LP~~C~v~~p~~   80 (91)
T 1t12_A            6 QVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCLKS---AAGAISGINLGKAAGLPSTCGVNIPYK   80 (91)
T ss_dssp             HHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHH---HHHHCTTCCHHHHHHHHHHTTCCCSSC
T ss_pred             HHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCccc---cccccCCcChhHHHHHHHHcCCCCCCC
Confidence            345889999999998776 88 99999999862        478999742   22334 799999999999999986 33


Q ss_pred             --CCCCCCCc
Q 033458          109 --VGYKCGPY  116 (119)
Q Consensus       109 --~~~~C~~~  116 (119)
                        .+++|..+
T Consensus        81 is~~~dC~~v   90 (91)
T 1t12_A           81 ISPSTDCSKV   90 (91)
T ss_dssp             SSSSSCCTTC
T ss_pred             CCCCCCCccC
Confidence              67788754


No 10 
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=97.01  E-value=0.0003  Score=44.07  Aligned_cols=66  Identities=23%  Similarity=0.470  Sum_probs=47.2

Q ss_pred             ccccChHhhhCCCCCCcHHHHHHHHhcC--CCCCcccccccccccccCCCCHHHHhh-hhhhCCCCCCCCCCCCC
Q 033458           43 KLAPCATAAQDEKASVSGSCCAQVKRMG--QNPKCLCAVLLSDTAKASGVNPQVAIT-IPKRCNFANRPVGYKCG  114 (119)
Q Consensus        43 ~L~pC~~yv~~~~~~Ps~~CC~~vk~l~--~~~~ClC~~~~~~~~~~~~in~~~a~~-lP~~Cg~~~~P~~~~C~  114 (119)
                      +|.-|.+-+. +...|...||+-++.+.  +-..|+|..++  ... . +|.+.+++ |-..||.. +|.||+|.
T Consensus        10 kLgvCanvL~-g~~~~~~~CC~Ll~GL~dleAAvCLCtaik--~Lg-i-lnlpv~L~llln~Cgk~-~P~gF~C~   78 (80)
T 1hyp_A           10 DLSICLNILG-GSLGTVDDCCALIGGLGDIEAIVCLCIQLR--ALG-I-LNLNRNLQLILNSCGRS-YPSNATCP   78 (80)
T ss_dssp             CCGGGGGGGG-TCCTTHHHHHHHHHTSCHHHHHHHHHHHHH--HHT-C-SCHHHHHHHHHHHTTCS-SCCCCCCS
T ss_pred             chhHHHHHhC-cCCCCCCccchhhhCcchhhhhhhhhhhcc--ccc-e-eecChhHHHHHHHhCCc-CcCCCCCC
Confidence            3567888664 33347789999999986  23679998775  212 2 47766666 55689999 89999996


No 11 
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=93.68  E-value=0.0055  Score=48.94  Aligned_cols=50  Identities=22%  Similarity=0.602  Sum_probs=34.0

Q ss_pred             HHHHHHHHhcCCCCCcccccccccccccC----C-----CCHHHHhhhhhhCCCCCCCCC
Q 033458           60 GSCCAQVKRMGQNPKCLCAVLLSDTAKAS----G-----VNPQVAITIPKRCNFANRPVG  110 (119)
Q Consensus        60 ~~CC~~vk~l~~~~~ClC~~~~~~~~~~~----~-----in~~~a~~lP~~Cg~~~~P~~  110 (119)
                      .+||+.|+.+.+.+.|.|..+...+-...    +     .=..+|..||..||+. .|..
T Consensus       429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~~  487 (500)
T 3ob4_A          429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQR  487 (500)
T ss_dssp             HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCSC
T ss_pred             HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCcc
Confidence            67999999983228999988864221100    0     0135599999999998 5643


No 12 
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=93.31  E-value=0.12  Score=33.56  Aligned_cols=60  Identities=22%  Similarity=0.500  Sum_probs=42.4

Q ss_pred             cccChHhhhCC---C---------CCCcHHHHHHHHhcCCCCCcccccccccccccC-CC----CHHHHhhhhhhCCCC
Q 033458           44 LAPCATAAQDE---K---------ASVSGSCCAQVKRMGQNPKCLCAVLLSDTAKAS-GV----NPQVAITIPKRCNFA  105 (119)
Q Consensus        44 L~pC~~yv~~~---~---------~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~-~i----n~~~a~~lP~~Cg~~  105 (119)
                      |.+|..|+.-.   .         ...-..||+.++.+  +..|.|..+...+-..+ +-    ...+|.+||..||+.
T Consensus        21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~--~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~   97 (103)
T 1s6d_A           21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM   97 (103)
T ss_dssp             TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS--CGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc--CcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCC
Confidence            88999999521   0         12347899999997  89999998853221111 11    256789999999997


No 13 
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=90.49  E-value=0.029  Score=34.40  Aligned_cols=47  Identities=23%  Similarity=0.555  Sum_probs=33.9

Q ss_pred             CCcHHHHHHHHhcCCCCCccccccccccc-----ccCC-----CCHHHHhhhhhhCCCC
Q 033458           57 SVSGSCCAQVKRMGQNPKCLCAVLLSDTA-----KASG-----VNPQVAITIPKRCNFA  105 (119)
Q Consensus        57 ~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~-----~~~~-----in~~~a~~lP~~Cg~~  105 (119)
                      ..-..||+.++.+  +..|.|..+...+-     ..++     -...+|..||..||+.
T Consensus         9 ~~~qqCC~qL~~~--~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~   65 (75)
T 1pnb_B            9 WLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMK   65 (75)
T ss_dssp             SCTHHHHHHHHTS--CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCT
T ss_pred             HHHHHHHHHHHhC--CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCC
Confidence            3457899999998  89999988763210     0111     1256788999999998


No 14 
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=89.22  E-value=0.14  Score=31.15  Aligned_cols=44  Identities=25%  Similarity=0.593  Sum_probs=32.7

Q ss_pred             HHHHHHHHhcCCCCCccccccccccc---ccCC--------CCHHHHhhhhhhCCCC
Q 033458           60 GSCCAQVKRMGQNPKCLCAVLLSDTA---KASG--------VNPQVAITIPKRCNFA  105 (119)
Q Consensus        60 ~~CC~~vk~l~~~~~ClC~~~~~~~~---~~~~--------in~~~a~~lP~~Cg~~  105 (119)
                      ..||+.++.+  +..|.|..+...+-   ....        -.+.+|..||..||+.
T Consensus         8 qqCC~eL~~~--~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~   62 (72)
T 2ds2_B            8 RQCCNQLRQV--DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIP   62 (72)
T ss_dssp             HHHHHHHTTS--CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHhc--CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCC
Confidence            6799999997  89999988763220   0101        1367899999999997


No 15 
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=89.17  E-value=0.068  Score=35.96  Aligned_cols=67  Identities=21%  Similarity=0.335  Sum_probs=43.1

Q ss_pred             cccccChHhhhC---CCCCC---cHHHHHHHHhcCCCCCccccccccccc---ccCC----------C-------CHHHH
Q 033458           42 IKLAPCATAAQD---EKASV---SGSCCAQVKRMGQNPKCLCAVLLSDTA---KASG----------V-------NPQVA   95 (119)
Q Consensus        42 ~~L~pC~~yv~~---~~~~P---s~~CC~~vk~l~~~~~ClC~~~~~~~~---~~~~----------i-------n~~~a   95 (119)
                      ..|..|..|+..   +...|   ...||..++++  +..|.|..+...+.   ...+          +       -...|
T Consensus        15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS--CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc--CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            447889999941   12223   35799999997  79999988753211   1011          0       11268


Q ss_pred             hhhhhhCCCCCCC-CCC
Q 033458           96 ITIPKRCNFANRP-VGY  111 (119)
Q Consensus        96 ~~lP~~Cg~~~~P-~~~  111 (119)
                      ..||..||+. .| ++.
T Consensus        93 ~~LP~~Cnl~-~~~~g~  108 (124)
T 1hss_A           93 ASITAVCRLP-IVVDAS  108 (124)
T ss_dssp             TTHHHHTTCC-EECSTT
T ss_pred             HhchhhcCCC-CCCCCC
Confidence            8999999999 45 443


No 16 
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=89.00  E-value=0.073  Score=35.17  Aligned_cols=62  Identities=24%  Similarity=0.485  Sum_probs=41.4

Q ss_pred             cccccChHhhh----CCC--CCCc-------HHHHHHHHhcCCCCCccccccccccc---ccC-CC-------CHHHHhh
Q 033458           42 IKLAPCATAAQ----DEK--ASVS-------GSCCAQVKRMGQNPKCLCAVLLSDTA---KAS-GV-------NPQVAIT   97 (119)
Q Consensus        42 ~~L~pC~~yv~----~~~--~~Ps-------~~CC~~vk~l~~~~~ClC~~~~~~~~---~~~-~i-------n~~~a~~   97 (119)
                      ..|..|..|+.    +++  ..+.       ..||+.++.+  ++.|.|..+...+-   ... .+       -+..|.+
T Consensus        16 ~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv--~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~   93 (114)
T 2lvf_A           16 QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM--DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAEN   93 (114)
T ss_dssp             THHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC--CcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence            35788999983    221  1111       4599999998  89999988753211   111 11       1568999


Q ss_pred             hhhhCCCC
Q 033458           98 IPKRCNFA  105 (119)
Q Consensus        98 lP~~Cg~~  105 (119)
                      ||..||+.
T Consensus        94 LP~~C~i~  101 (114)
T 2lvf_A           94 IPSRCNLS  101 (114)
T ss_dssp             HHHHHCCC
T ss_pred             ChHhcCCC
Confidence            99999998


No 17 
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=86.65  E-value=0.42  Score=32.07  Aligned_cols=64  Identities=20%  Similarity=0.578  Sum_probs=42.5

Q ss_pred             cccccChHhhhCC----C-C-----CC-------cHHHHHHHHhcCCCCCccccccccccc---ccC-C--CC---HHHH
Q 033458           42 IKLAPCATAAQDE----K-A-----SV-------SGSCCAQVKRMGQNPKCLCAVLLSDTA---KAS-G--VN---PQVA   95 (119)
Q Consensus        42 ~~L~pC~~yv~~~----~-~-----~P-------s~~CC~~vk~l~~~~~ClC~~~~~~~~---~~~-~--in---~~~a   95 (119)
                      ..|.+|..|+.-.    . .     ..       -..||+.|+.+.++..|.|..+...+-   ..+ +  ..   +.+|
T Consensus        23 ~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A  102 (127)
T 1w2q_A           23 VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKREL  102 (127)
T ss_dssp             CCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            3588999998521    1 0     01       257999999965579999998864320   011 1  12   4678


Q ss_pred             hhhhhhCCCC
Q 033458           96 ITIPKRCNFA  105 (119)
Q Consensus        96 ~~lP~~Cg~~  105 (119)
                      ..||..||+.
T Consensus       103 ~~LP~~C~i~  112 (127)
T 1w2q_A          103 MSLPQQCNFR  112 (127)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHhHHhcCCC
Confidence            9999999994


No 18 
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=86.61  E-value=0.27  Score=32.95  Aligned_cols=61  Identities=23%  Similarity=0.418  Sum_probs=41.8

Q ss_pred             cccccChHhhhCC---C-------CCC-----------cHHHHHHHHhcCCCCCccccccccccc-----ccC-C--C--
Q 033458           42 IKLAPCATAAQDE---K-------ASV-----------SGSCCAQVKRMGQNPKCLCAVLLSDTA-----KAS-G--V--   90 (119)
Q Consensus        42 ~~L~pC~~yv~~~---~-------~~P-----------s~~CC~~vk~l~~~~~ClC~~~~~~~~-----~~~-~--i--   90 (119)
                      ..|.+|..|+.-.   .       ..|           -..||+.++.+  +..|.|..+...+-     ... +  +  
T Consensus        25 ~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~--~~~C~C~aL~~~v~~~~qQgq~~gqq~~~  102 (125)
T 1psy_A           25 KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESER  102 (125)
T ss_dssp             STTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC--CSSHHHHHHHHHHHHHHHHTTCCTTCSHH
T ss_pred             hhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc--CcccccHHHHHHHHHHHHHhhhhHHHHHH
Confidence            3689999999521   0       012           26799999997  89999998853220     001 1  1  


Q ss_pred             CHHHHhhhhhhCCC
Q 033458           91 NPQVAITIPKRCNF  104 (119)
Q Consensus        91 n~~~a~~lP~~Cg~  104 (119)
                      -+.+|.+||..||+
T Consensus       103 ~~q~A~~LP~~C~i  116 (125)
T 1psy_A          103 VAQRAGEIVSSCGV  116 (125)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHhhHHHcCC
Confidence            25678999999999


No 19 
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=84.27  E-value=0.27  Score=32.89  Aligned_cols=67  Identities=18%  Similarity=0.250  Sum_probs=43.4

Q ss_pred             cccccChHhhhC----C-CCCC----cHHHHHHHHhcCCCCCccccccccccc---c--------cCCCC--------HH
Q 033458           42 IKLAPCATAAQD----E-KASV----SGSCCAQVKRMGQNPKCLCAVLLSDTA---K--------ASGVN--------PQ   93 (119)
Q Consensus        42 ~~L~pC~~yv~~----~-~~~P----s~~CC~~vk~l~~~~~ClC~~~~~~~~---~--------~~~in--------~~   93 (119)
                      ..|..|..|+..    . ...|    ...||+.++++  +..|.|..+...+-   .        .++.-        ..
T Consensus        15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~   92 (122)
T 1b1u_A           15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA   92 (122)
T ss_dssp             STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS--CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred             ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC--CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence            457899999931    1 2224    35699999997  79999988742110   0        00111        13


Q ss_pred             HHhhh--hhhCCCCCCCCCC
Q 033458           94 VAITI--PKRCNFANRPVGY  111 (119)
Q Consensus        94 ~a~~l--P~~Cg~~~~P~~~  111 (119)
                      .|..|  |..||+. .++|.
T Consensus        93 ~A~~Lv~P~~Cnl~-~~~g~  111 (122)
T 1b1u_A           93 FAPKLVTEVECNLA-TIHGG  111 (122)
T ss_dssp             HGGGTTSTTTTCCC-CTTSS
T ss_pred             HHHhcCCcccCCCC-CCCCC
Confidence            58889  9999999 46553


No 20 
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=83.81  E-value=0.7  Score=31.04  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=44.0

Q ss_pred             cccccChHhhh----CC-CCCC----cHHHHHHHHhcCCCCCccccccccccc----c-----c---CCCC--------H
Q 033458           42 IKLAPCATAAQ----DE-KASV----SGSCCAQVKRMGQNPKCLCAVLLSDTA----K-----A---SGVN--------P   92 (119)
Q Consensus        42 ~~L~pC~~yv~----~~-~~~P----s~~CC~~vk~l~~~~~ClC~~~~~~~~----~-----~---~~in--------~   92 (119)
                      ..|..|..|+.    +. ...|    ...||..++++  +..|.|..+...+-    .     .   ++.-        .
T Consensus        15 ~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~   92 (127)
T 1bea_A           15 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR   92 (127)
T ss_dssp             SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS--CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred             ccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc--CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence            44778999993    11 2223    34599999997  79999988742110    0     0   1111        3


Q ss_pred             HHHhhh--hhhCCCCCCCCCC-CC
Q 033458           93 QVAITI--PKRCNFANRPVGY-KC  113 (119)
Q Consensus        93 ~~a~~l--P~~Cg~~~~P~~~-~C  113 (119)
                      ..|..|  |..||+. .++|. .|
T Consensus        93 ~~A~~Lv~P~~Cnl~-~~~g~~~C  115 (127)
T 1bea_A           93 GFAATLVTEAECNLA-TISGVAEC  115 (127)
T ss_dssp             HHHTTTTSTTTTCCC-CTTSSSCC
T ss_pred             HHHHhcCCcccCCCC-CCCCCCCC
Confidence            458899  9999998 45443 44


No 21 
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=81.98  E-value=0.3  Score=31.74  Aligned_cols=61  Identities=21%  Similarity=0.506  Sum_probs=40.9

Q ss_pred             ccccChHhhh----CCC--CC-------C--cHHHHHHHHhcCCCCCcccccccccccc-----cCC-----CCHHHHhh
Q 033458           43 KLAPCATAAQ----DEK--AS-------V--SGSCCAQVKRMGQNPKCLCAVLLSDTAK-----ASG-----VNPQVAIT   97 (119)
Q Consensus        43 ~L~pC~~yv~----~~~--~~-------P--s~~CC~~vk~l~~~~~ClC~~~~~~~~~-----~~~-----in~~~a~~   97 (119)
                      .|.+|..|+.    ++.  ..       +  -..||+.++.+  +..|.|..+...+..     .++     -...+|..
T Consensus        14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v--~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~   91 (109)
T 1sm7_A           14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKN   91 (109)
T ss_dssp             CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT--CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSS
T ss_pred             cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc--CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence            3789999985    211  11       1  35799999997  899999887532110     011     12455889


Q ss_pred             hhhhCCCC
Q 033458           98 IPKRCNFA  105 (119)
Q Consensus        98 lP~~Cg~~  105 (119)
                      ||..||+.
T Consensus        92 LP~~Cnl~   99 (109)
T 1sm7_A           92 LPNVCNMK   99 (109)
T ss_dssp             HHHHSCCC
T ss_pred             CHHhcCCC
Confidence            99999998


Done!