BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033459
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 15/112 (13%)
Query: 9 SSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQK-EMSANEFIKIHAAYSTLSDP 67
+SLYDVL +P+ A +IK+AYRRLAR CHPDV T++ SA+EF+KIHAAY TLSDP
Sbjct: 64 ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123
Query: 68 HKRANYDRALFVVRKRPVSSFSSSSLSSEPMGSMSRFSGNFTTRNWETDQCW 119
KR+ YDR + R RP+ + +S L G++ RNWETDQCW
Sbjct: 124 EKRSVYDRRML-RRSRPL-TVGTSGL------------GSYVGRNWETDQCW 161
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 8 SSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDP 67
+ Y++LG+ SAD E+K AYRRLAR HPDV N++ + +F +I+ AY LSDP
Sbjct: 2 ARDFYEILGVSRSADAEELKRAYRRLARKYHPDV---NKEPGAEEKFKEINRAYEVLSDP 58
Query: 68 HKRANYDRALFVVRKRPVSSFSSSSLSSEPMGSMSRFSGNFTT 110
RANYDR + VS ++ S +G M F+ F T
Sbjct: 59 QARANYDR----FGEAGVSGVGAAGFSDFGIGDMGGFADIFET 97
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 10 SLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHK 69
S YD+LG+ S EIK AY++LAR HPDV ++ E + FI++ AY TLSDP +
Sbjct: 66 SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125
Query: 70 RANYDRAL 77
R YDR L
Sbjct: 126 RVLYDRDL 133
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 11 LYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHK 69
LY+VLG+ AD +EIK AYR+LAR HPDV KE A E F ++ AY LS+P K
Sbjct: 5 LYEVLGVAKDADADEIKKAYRKLARQYHPDV----NKEADAEEKFKEVKDAYDILSEPQK 60
Query: 70 RANYDR 75
RA YDR
Sbjct: 61 RAQYDR 66
>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC
11017) GN=dnaJ PE=3 SV=1
Length = 374
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
YD+LG+ SAD +E+K +YRRLAR HPDV N++ + ++F +I+ AY TLSDP R
Sbjct: 6 YDILGVSRSADPDELKRSYRRLARKYHPDV---NKEPGAEDKFKEINKAYETLSDPQMRG 62
Query: 72 NYDR 75
YD+
Sbjct: 63 RYDQ 66
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 6 SSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTL 64
++S Y++LG+ AD EIK AYRRLAR HPD+ N+ + A E F +I AY L
Sbjct: 2 ATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDI---NKDDPDAEEKFKEISEAYEIL 58
Query: 65 SDPHKRANYDR 75
SDP KRA YD+
Sbjct: 59 SDPDKRARYDQ 69
>sp|Q9LCQ4|DNAJ_BRECH Chaperone protein DnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3
SV=1
Length = 375
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ AD +EIK AYR+LAR HPDV N+ + +F ++ AY LS+P KRA
Sbjct: 6 YEVLGVGKGADADEIKKAYRKLARQYHPDV---NKAADAEEKFKEVKEAYDVLSEPQKRA 62
Query: 72 NYDRALFVVRKRPVSSFSSSSLSSEPMG 99
YDR + P F + MG
Sbjct: 63 QYDR---FGHQDPNQGFGGGGFDASGMG 87
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y++LG+P +A +EIK AYRRL R HPD+ K+ SA+E F +I+ AY LSDP KR
Sbjct: 8 YEILGVPRNATQDEIKQAYRRLVRQYHPDL----NKDPSAHEKFKEINEAYEVLSDPQKR 63
Query: 71 ANYDR 75
A YD+
Sbjct: 64 AQYDQ 68
>sp|P50026|DNAJ_SYNE7 Chaperone protein DnaJ OS=Synechococcus elongatus (strain PCC
7942) GN=dnaJ PE=3 SV=2
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y +LGIP SAD IKAA+R+LAR CHPD+ N + A E F +I AY LSDP +R
Sbjct: 8 YALLGIPQSADQAAIKAAFRKLARQCHPDL---NPGDRQAEERFKQISEAYEILSDPDRR 64
Query: 71 ANYDR 75
A Y R
Sbjct: 65 AEYQR 69
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ
PE=3 SV=1
Length = 369
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+P A EIK AY+RL + HPD N+KE + F +I AY LSDP KRA
Sbjct: 9 YEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKE-AEQRFKEIQEAYEVLSDPQKRA 67
Query: 72 NYDRALFV 79
YDR +V
Sbjct: 68 MYDRFGYV 75
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+P A EIK AY+RL + HPD N+KE + F +I AY LSDP KRA
Sbjct: 9 YEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKE-AEQRFKEIQEAYEVLSDPQKRA 67
Query: 72 NYDRALFV 79
YDR +V
Sbjct: 68 MYDRFGYV 75
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+P A EIK AY+RL + HPD N+KE + F +I AY LSDP KRA
Sbjct: 9 YEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKE-AEQRFKEIQEAYEVLSDPQKRA 67
Query: 72 NYDRALFV 79
YDR +V
Sbjct: 68 MYDRFGYV 75
>sp|C4L424|DNAJ_EXISA Chaperone protein DnaJ OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=dnaJ PE=3 SV=1
Length = 368
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ SA +IK AYR+LAR HPD+ NQ+ +A++F +I AY LSD KRA
Sbjct: 7 YEVLGLDKSASAQDIKRAYRKLARQYHPDI---NQEADAADKFKEIGEAYEVLSDEQKRA 63
Query: 72 NYDRALF 78
YDR F
Sbjct: 64 QYDRFGF 70
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+P +A EI+ AY+RL + HPD N+KE + F +I AY LSDP KRA
Sbjct: 9 YEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKE-AEQRFKEIQEAYEVLSDPQKRA 67
Query: 72 NYDRALFV 79
YDR +V
Sbjct: 68 MYDRFGYV 75
>sp|Q9RUG2|DNAJ_DEIRA Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=dnaJ PE=3 SV=2
Length = 376
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ +A +EIK+AYR+LA HPD N++E +A +F ++ AYS LSD KRA
Sbjct: 4 YELLGVSRTASADEIKSAYRKLALKLHPD---RNKEEGAAEKFAQVSEAYSVLSDTEKRA 60
Query: 72 NYDR 75
+YDR
Sbjct: 61 HYDR 64
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLGI SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLGI SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLGI SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLGI SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
S Y+VLG+ +A E+K AYR+LAR HPDV N++E + +F ++ AY TLSD
Sbjct: 2 SKRDYYEVLGVDRNASVEEVKKAYRKLARKYHPDV---NKEEDAEAKFKEVKEAYDTLSD 58
Query: 67 PHKRANYDR 75
P K+A YD+
Sbjct: 59 PQKKARYDQ 67
>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 18/98 (18%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ SAD E+K AYRRLAR HPDV N++ S F +I+ AY LSDP +A
Sbjct: 6 YEILGVSRSADKEELKRAYRRLARKYHPDV---NKEPGSEERFKEINRAYEILSDPEMKA 62
Query: 72 NYDRALFVVRKRPVSSFSSSSLSSEPMGSMSRFSGNFT 109
+DR F + +S G+ S FS +F+
Sbjct: 63 RFDR------------FGEAGVSG---GAASGFSTDFS 85
>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ AD EIK AYRRLAR HPDV N++ + F +I+ AY LS+P RA
Sbjct: 6 YEILGVARDADKEEIKQAYRRLARKYHPDV---NKEPGAEERFKEINRAYEVLSEPETRA 62
Query: 72 NYDR 75
YDR
Sbjct: 63 RYDR 66
>sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ AD EIK AYRRLAR HPDV N++ + F +I+ AY LS+P RA
Sbjct: 6 YEILGVARDADKEEIKQAYRRLARKYHPDV---NKEPGAEERFKEINRAYEVLSEPETRA 62
Query: 72 NYDR 75
YDR
Sbjct: 63 RYDR 66
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 AASSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYST 63
A+S+ Y++LG+P +A EIK AYRRL R HPD+ +K +F +I+ AY
Sbjct: 2 ASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDIC---KKPECEEKFKEINEAYQV 58
Query: 64 LSDPHKRANYD 74
LSDP KR YD
Sbjct: 59 LSDPEKRKLYD 69
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLG+ SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y+VLG+ SA +EIK AYR+L++ HPD+ KE A+E F +I AY LSDP KR
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDI----NKEAGADEKFKEISEAYEALSDPQKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 AQYDQ 67
>sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ OS=Staphylococcus carnosus (strain TM300)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ A +EIK AYR+L++ HPD+ NQ+E + +F +I AY LSD +KRA
Sbjct: 7 YEVLGVSKDASKDEIKKAYRKLSKKYHPDI---NQEEGAEEKFKEISEAYEVLSDENKRA 63
Query: 72 NYDR 75
NYD+
Sbjct: 64 NYDQ 67
>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ
PE=3 SV=1
Length = 375
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y++LG+ A+ +EIK AYRRLAR HPDV KE+ A E F +I+ AY LS+P R
Sbjct: 6 YEILGVSRDANKDEIKRAYRRLARKYHPDV----NKEIGAEERFKEINRAYEILSEPETR 61
Query: 71 ANYDRALFVVRKRPVSSFSSSSLSSEPMGSMS 102
A YDR + VSS + S MG ++
Sbjct: 62 ARYDR----FGEAGVSSGAGSGFEYGDMGGIA 89
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
S Y+VLG+ SA +EIK AYRRLA+ HPDV +++E + +F ++ AY LSD
Sbjct: 2 SKRDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDV---SKEENAVEKFKEVQEAYEVLSD 58
Query: 67 PHKRANYDR 75
KRA YD+
Sbjct: 59 EQKRAQYDQ 67
>sp|O27352|DNAJ_METTH Chaperone protein DnaJ OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=dnaJ PE=3 SV=1
Length = 376
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ AD EIK AYRRLAR HPDV + +A +F +I AY+ LSD KRA
Sbjct: 7 YEILGVDRGADKKEIKKAYRRLARKYHPDV---SDDPDAAEKFKEISEAYAVLSDDEKRA 63
Query: 72 NYDR 75
YDR
Sbjct: 64 RYDR 67
>sp|Q9KD71|DNAJ_BACHD Chaperone protein DnaJ OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=dnaJ PE=3 SV=1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
S Y+VLG+ +A +E+K AYR+LAR HPDV N+ + ++F ++ A+ TLSD
Sbjct: 2 SKRDYYEVLGVDRNASADEVKKAYRKLARKYHPDV---NKAPDAEDKFKEVKEAFDTLSD 58
Query: 67 PHKRANYDR 75
P K+A+YD+
Sbjct: 59 PQKKAHYDQ 67
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ SA +EIK AYR+L++ HPD+ N++E + +F +I AY LSD +KRA
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKQYHPDI---NKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 72 NYDR 75
NYD+
Sbjct: 64 NYDQ 67
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 10 SLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHK 69
+LYD+L +P +A EIK AY+RLA+ HPDV ++ + F++I+ AYS LSDP++
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDV-----NKLGSQTFVEINNAYSILSDPNQ 56
Query: 70 RANYDRAL 77
+ YD L
Sbjct: 57 KEKYDSML 64
>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=dnaJ PE=3 SV=1
Length = 374
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
YD+LG+ A ++K AYRRLAR HPDV KE A E F +I+ AY LSDP R
Sbjct: 6 YDILGVSRDAGQEDLKQAYRRLARKYHPDV----NKEAGAEERFKEINRAYEVLSDPETR 61
Query: 71 ANYDR 75
A YDR
Sbjct: 62 ARYDR 66
>sp|Q5N0G1|DNAJ_SYNP6 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1
Length = 376
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 8 SSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDP 67
++ Y +LG+ AD +EIK AYRRLAR HPDV N++ + ++F +I+ AY LS+P
Sbjct: 2 AADYYQLLGVARDADKDEIKRAYRRLARKYHPDV---NKEPGAEDKFKEINRAYEVLSEP 58
Query: 68 HKRANYDR 75
RA YD+
Sbjct: 59 ETRARYDQ 66
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ SA +EIK AYR+L++ HPD+ N++E + +F +I AY LSD +KRA
Sbjct: 7 YEVLGVNKSASKDEIKKAYRKLSKKYHPDI---NKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 72 NYDR 75
NYD+
Sbjct: 64 NYDQ 67
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 4 AASSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYST 63
A + + LYD+LG+P A NE+K AYR+LA+ HPD + + ++F +I AY
Sbjct: 2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPD-----KNPNAGDKFKEISFAYEV 56
Query: 64 LSDPHKRANYDR 75
LS+P KR YDR
Sbjct: 57 LSNPEKRELYDR 68
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 4 AASSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYST 63
A + + LYD+LG+P A NE+K AYR+LA+ HPD + + ++F +I AY
Sbjct: 2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPD-----KNPNAGDKFKEISFAYEV 56
Query: 64 LSDPHKRANYDR 75
LS+P KR YDR
Sbjct: 57 LSNPEKRELYDR 68
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 4 AASSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYST 63
A + + LYD+LG+P A NE+K AYR+LA+ HPD + + ++F +I AY
Sbjct: 2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPD-----KNPNAGDKFKEISFAYEV 56
Query: 64 LSDPHKRANYDR 75
LS+P KR YDR
Sbjct: 57 LSNPEKRELYDR 68
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 4 AASSSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYST 63
A + + LYD+LG+P A NE+K AYR+LA+ HPD + + ++F +I AY
Sbjct: 2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPD-----KNPNAGDKFKEISFAYEV 56
Query: 64 LSDPHKRANYDR 75
LS+P KR YDR
Sbjct: 57 LSNPEKRELYDR 68
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
S Y+VLG+ SA +EIK AYR+L++ HPD+ N++ +A +F ++ AY TLSD
Sbjct: 2 SKRDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDI---NKEAGAAEKFKEVKEAYETLSD 58
Query: 67 PHKRANYDR 75
KRA+YD+
Sbjct: 59 DQKRAHYDQ 67
>sp|P25491|MAS5_YEAST Mitochondrial protein import protein MAS5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YDJ1 PE=1
SV=1
Length = 409
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 9 SSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPH 68
+ YD+LG+PV+A EIK AYR+ A HPD N E +A +F + AAY LSDP
Sbjct: 5 TKFYDILGVPVTATDVEIKKAYRKCALKYHPD---KNPSEEAAEKFKEASAAYEILSDPE 61
Query: 69 KRANYDR 75
KR YD+
Sbjct: 62 KRDIYDQ 68
>sp|Q7V9C8|DNAJ_PROMM Chaperone protein DnaJ OS=Prochlorococcus marinus (strain MIT
9313) GN=dnaJ PE=3 SV=1
Length = 378
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
YD+LG+ ADG+ +K AYRRLAR HPD+ N+ + + F +I AY LSDP R
Sbjct: 5 YDLLGVSKDADGDTLKRAYRRLARQYHPDI---NKDPGAEDRFKEIGRAYEVLSDPQTRG 61
Query: 72 NYDR 75
YD+
Sbjct: 62 RYDQ 65
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
+ LYDVLG+ A EIK AYR+LA HPDV N + + +F KI+ AY TLSD
Sbjct: 2 AEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDV---NHEPGAEKKFKKINEAYETLSD 58
Query: 67 PHKRANYDR 75
KRA YD+
Sbjct: 59 DQKRAQYDQ 67
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ +A +EIK A+RRLAR HPDV N+ + +F +I+ AY LSDP KR+
Sbjct: 8 YEVLGVQRNASQDEIKKAFRRLARQYHPDV---NKAPDAEAKFKEINEAYEVLSDPEKRS 64
Query: 72 NYDR 75
YDR
Sbjct: 65 MYDR 68
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+ D E+K AYRRLAR HPDV N++ + + F +I+ AY LS+P RA
Sbjct: 6 YEILGVSRDTDKEELKQAYRRLARKYHPDV---NKEPGAEDRFKEINRAYEVLSEPETRA 62
Query: 72 NYDR 75
YDR
Sbjct: 63 RYDR 66
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y++LG+P +A EIK AYRRLA+ HPD N++ + +F +I+ AY LSDP KR
Sbjct: 8 YEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKE--AEEKFKEINEAYEVLSDPEKRR 65
Query: 72 NYDR 75
YD+
Sbjct: 66 KYDQ 69
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSDPHKRA 71
Y+VLG+ +A +EIK A+RRLAR HPDV N+ + +F +I+ AY LSDP KR+
Sbjct: 8 YEVLGVQRNASQDEIKKAFRRLARQYHPDV---NKAPDAEAKFKEINEAYEVLSDPEKRS 64
Query: 72 NYDR 75
YDR
Sbjct: 65 MYDR 68
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 7 SSSSLYDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANEFIKIHAAYSTLSD 66
S Y+VLG+ SA +EIK AYR+L++ HPD+ N++ S +F ++ AY TLSD
Sbjct: 2 SKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEAGSDEKFKEVKEAYETLSD 58
Query: 67 PHKRANYDR 75
KRA+YD+
Sbjct: 59 DQKRAHYDQ 67
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Query: 12 YDVLGIPVSADGNEIKAAYRRLARTCHPDVVATNQKEMSANE-FIKIHAAYSTLSDPHKR 70
Y++LG+ +A EIK AYR+LAR HPDV N+ + +A E F +I+ AY LSDP KR
Sbjct: 6 YEILGVARNATPEEIKKAYRKLARKYHPDV---NKDDPNAAEKFKEINEAYEVLSDPEKR 62
Query: 71 ANYDR 75
A YD+
Sbjct: 63 ARYDQ 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.123 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,624,060
Number of Sequences: 539616
Number of extensions: 1287771
Number of successful extensions: 5545
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 3716
Number of HSP's gapped (non-prelim): 1097
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)