BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033460
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
Length = 757
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 8 NFLSSAVILWILIVEMAETTAPPQAESAVQIVYTERPQDEEPESFHLRILSSVLGSEEAA 67
+FLSS +L + ++ ++ IV+ + Q H S L S +
Sbjct: 4 SFLSSTAFFLLLCLGFCHVSSS-SSDQGTYIVHMAKSQMPSSFDLHSNWYDSSLRSISDS 62
Query: 68 KDALLYSYKTAASGFSAKLTPQQVDEISKQPGVLQVVPSRTLQLHS 113
+ LLY+Y+ A GFS +LT ++ D + QPGV+ V+P +LH+
Sbjct: 63 AE-LLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHT 107
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
Length = 731
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 36 VQIVYTERPQDEEPESFHLR---ILSSVLGSEEAAKDALLYSYKTAASGFSAKLTPQQVD 92
+ IVY R + E+P+S HL +L V+GS A +++L++YK + +GF+ KLT ++ +
Sbjct: 33 IYIVYMGR-KLEDPDSAHLHHRAMLEQVVGST-FAPESVLHTYKRSFNGFAVKLTEEEAE 90
Query: 93 EISKQPGVLQVVPSRTLQLHS 113
+I+ GV+ V + +LH+
Sbjct: 91 KIASMEGVVSVFLNEMNELHT 111
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
Length = 749
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 38 IVYT-ERPQD-EEPESFHLRILSSVLGSEEAAKDALLYSYKTAASGFSAKLTPQQVDEIS 95
I+Y +RP + EE H+ +LSS+ S+E AK+ +YSY A + F+AKL+P + ++
Sbjct: 39 IIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMM 98
Query: 96 KQPGVLQVVPSRTLQLHS 113
+ V+ V ++ +LH+
Sbjct: 99 EMEEVVSVSRNQYRKLHT 116
>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1
Length = 230
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 17 WILIVEMAETTAPPQAESAVQIVYTERPQDEEPESFHLRILSSVLGSEEAAKDALLYSYK 76
W++++E + AP + Q++ T +L L++VLGS E AK +
Sbjct: 89 WLIVMEFPKDPAP----TREQMIDT-----------YLNTLATVLGSMEEAKKNMYAFST 133
Query: 77 TAASGFSAKLTPQQVDEISKQPGVLQVVPSRTLQLHS 113
T +GF +T + ++ PGVL V+P + + +
Sbjct: 134 TTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKN 170
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
SV=1
Length = 775
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 44 PQDEEPESF------HLRILS-SVLG---SEEAAKDALLYSYKTAASGFSAKLTPQQVDE 93
P E ++F HL L +VLG EE LLYSY +A GF+A+LT + +
Sbjct: 34 PNSETAKTFASKFDWHLSFLQEAVLGVEEEEEEPSSRLLYSYGSAIEGFAAQLTESEAEI 93
Query: 94 ISKQPGVLQVVPSRTLQLHSGH 115
+ P V+ V P LQ+ + +
Sbjct: 94 LRYSPEVVAVRPDHVLQVQTTY 115
>sp|Q54CU9|DUS3L_DICDI tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
OS=Dictyostelium discoideum GN=dus3l PE=3 SV=1
Length = 671
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 21 VEMAETTAPPQAE-SAVQIVYTERPQDEEPESFHLRILSSVLGSEEAAKDALLYSYKTAA 79
+E ETT P +E +V+ + E+ +E + + ++ + +EE +K + K +
Sbjct: 1 MESVETTTPSNSEIKSVETIVEEQKVNETNTTLNAEVVETPTKTEEKSKTEITNENKERS 60
Query: 80 SGFSAKLTPQQV 91
G AK+ P+ V
Sbjct: 61 RGLEAKIKPEFV 72
>sp|Q28DX1|ERLN1_XENTR Erlin-1 OS=Xenopus tropicalis GN=erlin1 PE=2 SV=1
Length = 319
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 22 EMAETTAPPQAESAVQIV---YTERPQDEEPESFHLRIL-SSVLGSEEAAKDALLYSYKT 77
E A +AE Q+ Y ++ ++E E F I S+ L E+A DA Y+ +
Sbjct: 208 ETERKKAVIEAEKVAQVAKIQYRQKVMEKETEKFISEIEDSAYLAREKAKADAEYYTAQK 267
Query: 78 AASGFSAKLTPQQVDEISKQ 97
+A KLTPQ ++ I Q
Sbjct: 268 SADANKLKLTPQYLELIKYQ 287
>sp|Q7RYM7|PBN1_NEUCR Protein pbn-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=pbn-1 PE=3 SV=1
Length = 501
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 10 LSSAVIL---WILIVEMAETTAPPQAESAVQIVYTERPQDEEPESFHLRILSSVLGSEE- 65
+S AV L W + T+ PQ + V ++ ++RP EP + L +VLG ++
Sbjct: 185 ISHAVKLTATWPYQKQEVHATSRPQTRTEVGVLNSDRPGHLEPHELGISGLLTVLGQDKK 244
Query: 66 --AAKDALLYSYKTAASGFSAKL 86
A A ++ A S FSA+
Sbjct: 245 PSATMFAFASRHRDAESSFSAEF 267
>sp|Q6CDV4|IF4A_YARLI ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=TIF1 PE=3 SV=1
Length = 395
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 47 EEPESFHLRILSSVLGSEEAAKDALLYSYKTAASGFSAKLTPQQVDEISKQPGVLQVVPS 106
E P S R + V+ + A + KTA SA Q +DE K+P L + P+
Sbjct: 43 ENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISAL---QNIDEKIKKPQALIIAPT 99
Query: 107 RTL 109
R L
Sbjct: 100 REL 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,576,878
Number of Sequences: 539616
Number of extensions: 1323923
Number of successful extensions: 2606
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2596
Number of HSP's gapped (non-prelim): 23
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)