Query 033468
Match_columns 118
No_of_seqs 101 out of 483
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 03:30:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033468.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033468hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2csba1 a.60.2.4 (A:351-409) T 33.3 7.8 0.00057 21.8 1.2 28 46-73 17-46 (59)
2 d1kxpd3 a.126.1.1 (D:405-473) 28.1 53 0.0039 19.1 4.5 30 42-71 11-40 (69)
3 d1ilea1 a.27.1.1 (A:642-821) I 23.8 85 0.0062 20.0 7.0 75 9-86 38-120 (180)
4 d1nf4a_ a.25.1.1 (A:) Bacterio 22.7 86 0.0062 19.6 7.0 70 6-81 84-156 (169)
5 d1y6ia1 a.118.1.22 (A:1-82) Mg 19.7 9.2 0.00067 23.4 -0.3 52 47-98 6-61 (82)
6 d1fpoa2 a.23.1.1 (A:77-171) HS 18.0 88 0.0064 18.3 4.3 32 42-73 15-46 (95)
7 d1gvfa_ c.1.10.2 (A:) Tagatose 17.4 1.2E+02 0.0089 21.5 5.6 41 25-65 217-258 (284)
8 d1v9va1 a.29.10.1 (A:8-108) Mi 15.6 1.3E+02 0.0091 18.6 7.0 70 11-82 30-99 (101)
9 d1ej2a_ c.26.1.3 (A:) Nicotina 14.9 85 0.0062 19.0 3.7 35 45-79 128-166 (167)
10 d1qo8a2 c.3.1.4 (A:103-359,A:5 14.8 1.3E+02 0.0093 20.3 5.0 52 50-101 87-139 (317)
No 1
>d2csba1 a.60.2.4 (A:351-409) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=33.32 E-value=7.8 Score=21.76 Aligned_cols=28 Identities=43% Similarity=0.661 Sum_probs=23.1
Q ss_pred HHHHHHHHHhcCCC--CCHHHHHHHHHHHH
Q 033468 46 ADDLRLRFEANKHV--TDLDAIDRMIDEAE 73 (118)
Q Consensus 46 a~~iR~~Fe~nk~v--tDp~~I~~Ll~~G~ 73 (118)
+.++-.-|+.-..+ +|.++|+.++++|+
T Consensus 17 adeliehfesiagilatdleeiermyeegr 46 (59)
T d2csba1 17 ADELIEHFESIAGILATDLEEIERMYEEGR 46 (59)
T ss_dssp HHHHHHHHSSHHHHHTSCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHccc
Confidence 45677888887776 89999999999885
No 2
>d1kxpd3 a.126.1.1 (D:405-473) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.14 E-value=53 Score=19.08 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 033468 42 FYKDADDLRLRFEANKHVTDLDAIDRMIDE 71 (118)
Q Consensus 42 ~r~~a~~iR~~Fe~nk~vtDp~~I~~Ll~~ 71 (118)
|.....++.++|+...--..+.+++.|+++
T Consensus 11 Fte~kkkL~e~lr~k~P~as~~~l~~mVek 40 (69)
T d1kxpd3 11 FTEYKKKLAERLKAKLPDATPKELAKLVNK 40 (69)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCHHHHHHHHHH
Confidence 344456899999998888899999999876
No 3
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=23.85 E-value=85 Score=19.99 Aligned_cols=75 Identities=20% Similarity=0.210 Sum_probs=48.4
Q ss_pred HHhhhhHhHHHHHHHHHHHH-----HHHHhhhhh--hHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhHhhc
Q 033468 9 AYVARRAAQKERVQILYRRA-----LKDTLNWAV--HRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRH 81 (118)
Q Consensus 9 ~~~~~~~~~r~rVL~LYR~~-----LR~~~~~~~--~r~~~r~~a~~iR~~Fe~nk~vtDp~~I~~Ll~~G~~eL~~~~H 81 (118)
|.+++.....++|...|... +..+..|-. .-+.|. ..++.++-...+-.+...+...+...-..+-...|
T Consensus 38 wil~~l~~~~~~v~~~~~~~~f~~a~~~l~~f~~~~l~~~Y~---e~~K~~l~~~~~~~~~~~~~~~l~~il~~~l~lla 114 (180)
T d1ilea1 38 WLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYV---RRNRRRFWKNEDALDREAAYATLYEALVLVATLAA 114 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSTTTH---HHHHHHHHTCTTTSSTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhHhhhhHHHH---HhccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888888777643 333333311 112222 34666776555445556677788888888888999
Q ss_pred C-CCCc
Q 033468 82 P-DPYI 86 (118)
Q Consensus 82 p-~Py~ 86 (118)
| -||+
T Consensus 115 P~~Pfi 120 (180)
T d1ilea1 115 PFTPFL 120 (180)
T ss_dssp TTSTTH
T ss_pred HHHHHH
Confidence 9 9984
No 4
>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=22.71 E-value=86 Score=19.61 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=42.5
Q ss_pred ccHHHhhhhHhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHHHHhHhhc
Q 033468 6 STAAYVARRAAQKERVQILYRRALKDTLNW--AVHRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDE-AEATYNKWRH 81 (118)
Q Consensus 6 ~~~~~~~~~~~~r~rVL~LYR~~LR~~~~~--~~~r~~~r~~a~~iR~~Fe~nk~vtDp~~I~~Ll~~-G~~eL~~~~H 81 (118)
.+.-++...+..-+.|...|+++++.+..- ..-++.++. +-.+-+ .|+.-.+.+-.+|+. |+.-|....-
T Consensus 84 ~~~e~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~----il~eE~--~H~~~~e~~l~~i~~~G~~yl~~~~~ 156 (169)
T d1nf4a_ 84 AVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER----IIEEEQ--AHLTYYENIGSHIKNLGDTYLAKIAG 156 (169)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHTHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhC
Confidence 455667778888999999999999999732 223344442 222222 344445555555555 7666654443
No 5
>d1y6ia1 a.118.1.22 (A:1-82) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=19.67 E-value=9.2 Score=23.36 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhHhhcC----CCCcCCCCCCCccccc
Q 033468 47 DDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRHP----DPYIVPWAPGGSKFCR 98 (118)
Q Consensus 47 ~~iR~~Fe~nk~vtDp~~I~~Ll~~G~~eL~~~~Hp----~Py~~p~~pgG~~~~R 98 (118)
..+|++|.....=+-...|-.|...|+.-+.....+ .+...|+-..|.+|+.
T Consensus 6 ~~L~~ql~sgSeK~QLQ~IpqLa~~Ge~G~~vL~eFL~~~~~~~~~t~V~GkaYq~ 61 (82)
T d1y6ia1 6 TELSQQLHDASEKKQLTAIAALAEMGEGGQGILLDYLAKNVPLEKPVLAVGNVYQT 61 (82)
T ss_dssp HHHHHHHHHSCTTTHHHHHHHHHTSHHHHHHHHHHHHHHHCSCSSCCHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHccchhHHHHHHHHHHhCccCCCCcccchHHHH
Confidence 468899987554455788999999888887666554 2666778888888875
No 6
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=18.05 E-value=88 Score=18.25 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 033468 42 FYKDADDLRLRFEANKHVTDLDAIDRMIDEAE 73 (118)
Q Consensus 42 ~r~~a~~iR~~Fe~nk~vtDp~~I~~Ll~~G~ 73 (118)
|......+|.+.++-.+-.|+..++.|..+-+
T Consensus 15 FLMeqME~RE~lee~~~~~d~~~l~~l~~ei~ 46 (95)
T d1fpoa2 15 FLMEQLELREELDEIEQAKDEARLESFIKRVK 46 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Confidence 33334455666655444455555555544433
No 7
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=17.37 E-value=1.2e+02 Score=21.46 Aligned_cols=41 Identities=20% Similarity=0.141 Sum_probs=26.4
Q ss_pred HHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 033468 25 YRRALKDTL-NWAVHRHLFYKDADDLRLRFEANKHVTDLDAI 65 (118)
Q Consensus 25 YR~~LR~~~-~~~~~r~~~r~~a~~iR~~Fe~nk~vtDp~~I 65 (118)
.+++++.+- +++..-+........+|+.+.+|....||..+
T Consensus 217 i~~ai~~Gi~KiNi~T~l~~a~~~~~~~~l~~n~~~~d~~~~ 258 (284)
T d1gvfa_ 217 VRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYY 258 (284)
T ss_dssp HHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHH
T ss_pred HHHHHHcCeEEEEechHHHHHHHHHHHHHHHhCCCCCCHHHH
Confidence 455566663 33333333333446899999999999998765
No 8
>d1v9va1 a.29.10.1 (A:8-108) Microtubule-associated serine/threonine-protein kinase 3, MAST3 (KIAA0561) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.64 E-value=1.3e+02 Score=18.60 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=41.2
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhHhhcC
Q 033468 11 VARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRHP 82 (118)
Q Consensus 11 ~~~~~~~r~rVL~LYR~~LR~~~~~~~~r~~~r~~a~~iR~~Fe~nk~vtDp~~I~~Ll~~G~~eL~~~~Hp 82 (118)
+.++.-| ||+.|=|-||..+++--..-.+|...-.++-.-..+.+.=++++.+..+-.--++-|-.++-|
T Consensus 30 vl~FvhH--QiiElARDCL~KS~e~lITs~YF~Else~LekLl~ea~erSe~~~~~~i~~lvkkLL~IIsRP 99 (101)
T d1v9va1 30 VLGFIHH--QIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRP 99 (101)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHH--HHHHHHHHHHHhhhhcChhHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhcccC
Confidence 3445444 699999999999986644434555443455555555555566666555444444445444433
No 9
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=14.86 E-value=85 Score=18.97 Aligned_cols=35 Identities=6% Similarity=0.123 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhcCCCCC---HHHHHHHHH-HHHHHHhHh
Q 033468 45 DADDLRLRFEANKHVTD---LDAIDRMID-EAEATYNKW 79 (118)
Q Consensus 45 ~a~~iR~~Fe~nk~vtD---p~~I~~Ll~-~G~~eL~~~ 79 (118)
..++||+...++++++. +.+++.|.+ .|...|..+
T Consensus 128 SST~IR~~i~~g~~~~~lvP~~V~~~i~~~~g~~r~~~~ 166 (167)
T d1ej2a_ 128 SGTEVRRRMLDDGDWRSLLPESVVEVIDEINGVERIKHL 166 (167)
T ss_dssp SHHHHHHHHHHTCCCGGGSCHHHHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHcCCChhHhCCHHHHHHHHHCCcHHHHHhc
Confidence 35789999998888754 345554444 477777654
No 10
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=14.81 E-value=1.3e+02 Score=20.34 Aligned_cols=52 Identities=8% Similarity=0.087 Sum_probs=36.6
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHhHhhcC-CCCcCCCCCCCcccccCCC
Q 033468 50 RLRFEANKHVTDLDAIDRMIDEAEATYNKWRHP-DPYIVPWAPGGSKFCRNPT 101 (118)
Q Consensus 50 R~~Fe~nk~vtDp~~I~~Ll~~G~~eL~~~~Hp-~Py~~p~~pgG~~~~Rn~~ 101 (118)
.+..+....+.|++.++.+.+++.+.+...... -|+......||..+.|...
T Consensus 87 ~d~~~~~~~~~d~~lv~~~~~~a~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~ 139 (317)
T d1qo8a2 87 EDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHR 139 (317)
T ss_dssp HHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEE
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhhhhHHHhhhcccccccccCcccccccc
Confidence 344456678899999999999887776555443 5565566778888877543
Done!