BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033470
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSD8|MUB4_ARATH Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana
GN=MUB4 PE=1 SV=1
Length = 120
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 105/120 (87%), Gaps = 2/120 (1%)
Query: 1 MPEEELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISA 60
MPEE+LVELKFRLYDGSD+GPF+YSPT+TV+MLKERI S+WPKDKKIVPK+A+DIKLI+A
Sbjct: 1 MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60
Query: 61 GKILENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKL--DEPQKKNFCSCSIL 118
GKILEN KTV QCK PF +LPK ITMHVVVQ TKA+ EKK+ +E +++FCSC+I+
Sbjct: 61 GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120
>sp|Q9SW27|MUB3_ARATH Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana
GN=MUB3 PE=1 SV=1
Length = 118
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 80/118 (67%), Positives = 96/118 (81%)
Query: 1 MPEEELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISA 60
MPEEE +++KFRLYDGSDIGPFRYS STV LK+R+ SDWPK K +VPK N++KLIS+
Sbjct: 1 MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
GKILENNKTVGQCK PFG++ G I MHVVVQP L K+KTEKK+D+ K C+C+IL
Sbjct: 61 GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118
>sp|Q7XRU4|MUB4_ORYSJ Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp.
japonica GN=MUB4 PE=2 SV=2
Length = 135
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 10 KFRLYDGSDIGPFRYSP-TSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKILENNK 68
KFRL+DGSDIGP R + +TVA LK+R+ +DWPKDK IVPKTAND+KLIS GKILEN+K
Sbjct: 26 KFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGKILENDK 85
Query: 69 TVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
+ QC+ PFG+LP ITMHVVVQP K+K +KK ++ K CSC+IL
Sbjct: 86 NIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135
>sp|Q6Z8K4|MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp.
japonica GN=MUB3 PE=3 SV=1
Length = 119
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 90/115 (78%)
Query: 4 EELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKI 63
+E +E+KFRL+DG+DIGP +Y P++TV+ LKE I + WP+DK+I PKT ND+KLI+AG+I
Sbjct: 5 KEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRI 64
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
LENN+T+ + +VP GE+P G ITMHVVV+PP +EK+L K+N C C+IL
Sbjct: 65 LENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119
>sp|Q8GWJ6|MUB6_ARATH Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana
GN=MUB6 PE=1 SV=1
Length = 119
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 87/116 (75%)
Query: 3 EEELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGK 62
EE+ +ELKFRL DG+DIGP +Y+ + TV+ LKE++ S WPKDK+ PKT ND+KLI+AGK
Sbjct: 4 EEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGK 63
Query: 63 ILENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
ILENN+T+ + ++P ELP ITMH+V++ P K+EK ++P KN C C+IL
Sbjct: 64 ILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119
>sp|Q9SH14|MUB5_ARATH Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana
GN=MUB5 PE=1 SV=1
Length = 120
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 1 MPEEELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISA 60
M +E+L+ELKFRL DG+DIGP +YS TVA LKE+I + WPKDK+ PK N++KLI+
Sbjct: 1 MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60
Query: 61 GKILENNKTVGQCK--VPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
GKILENNKT+ + + + GELP TMHVV++PPL + K EK ++P +K+ C C IL
Sbjct: 61 GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120
>sp|Q75GT2|MUB1_ORYSJ Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp.
japonica GN=MUB1 PE=3 SV=1
Length = 119
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 4 EELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKI 63
+E E+KFRL DG+DIGP RY STVA LKE I + WPKDK+ P+T ND+KLI+AGKI
Sbjct: 6 QEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINAGKI 65
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
LENNKT+ +CK P + G TMHVVV+ P + ++ K + + K C CSI+
Sbjct: 66 LENNKTLSECKSPICDF-SGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM 119
>sp|Q8LCS8|MUB2_ARATH Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana
GN=MUB2 PE=1 SV=1
Length = 124
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Query: 4 EELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKI 63
++ +E+KFRL DGSDIGP + +TVA LKE + + WP+DK+ PKT D+KLISAG+I
Sbjct: 5 KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKL---DEPQKKNFCSC 115
LENNKTVG C+ P G TMHV++Q +T+ + +KK D Q K C C
Sbjct: 65 LENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119
>sp|Q67UI2|MUB2_ORYSJ Membrane-anchored ubiquitin-fold protein 2 OS=Oryza sativa subsp.
japonica GN=MUB2 PE=2 SV=1
Length = 126
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 9/119 (7%)
Query: 5 ELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKIL 64
E VE++FRL DGSDIGP + +TV LKE + + WP+ K+I P+T ND+ +I+AG++L
Sbjct: 12 EAVEVRFRLDDGSDIGPSMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVTIINAGQVL 71
Query: 65 ENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKN-----FCSCSIL 118
ENN+T+ + + E P+G ITMHVVV+ +++ E+++ +P K C C+IL
Sbjct: 72 ENNRTLAESRNLAAESPEGPITMHVVVR----RSRPERRVKQPPKARPPERIGCGCTIL 126
>sp|Q9MAB9|MUB1_ARATH Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana
GN=MUB1 PE=1 SV=1
Length = 117
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Query: 7 VELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKILEN 66
+E+KFRL DGSDIGP + +TV+ LKE + S+WP++K+ PKT ++KLISAGK+LEN
Sbjct: 8 LEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLEN 67
Query: 67 NKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
+KTV + P L TMHV++Q P+T+ EKK K N C CS++
Sbjct: 68 SKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEK--EKKPKGDPKMNKCVCSVM 117
>sp|O95164|UBL3_HUMAN Ubiquitin-like protein 3 OS=Homo sapiens GN=UBL3 PE=1 SV=1
Length = 117
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 5 ELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKD-KKIVPKTANDIKLISAGKI 63
+++ L+ L G F +SP + + + + ++ +WP D ++ + N ++LI G+
Sbjct: 8 DMINLRLILVSGK-TKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRF 66
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
L N T+G K+PFG+ T MH+V + L + ++ + + + C IL
Sbjct: 67 LHGNVTLGALKLPFGK----TTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL 117
>sp|Q2TA46|UBL3_BOVIN Ubiquitin-like protein 3 OS=Bos taurus GN=UBL3 PE=3 SV=1
Length = 117
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 5 ELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKD-KKIVPKTANDIKLISAGKI 63
+++ L+ L G F +SP + + + + ++ +WP D ++ + N ++LI G+
Sbjct: 8 DMINLRLILVSGK-TKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRF 66
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
L N T+G K+PFG+ T MH+V + L + ++ + + + C IL
Sbjct: 67 LHGNVTLGALKLPFGK----TTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL 117
>sp|Q5BJT2|UBL3_RAT Ubiquitin-like protein 3 OS=Rattus norvegicus GN=Ubl3 PE=2 SV=1
Length = 117
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 5 ELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKD-KKIVPKTANDIKLISAGKI 63
+++ L+ L G F +SP + + + + ++ +WP D ++ + N ++LI G+
Sbjct: 8 DMINLRLILVSGK-TKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRF 66
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
L N T+G K+PFG+ T MH+V + L + ++ + + + C IL
Sbjct: 67 LHGNVTLGALKLPFGK----TTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL 117
>sp|Q9Z2M6|UBL3_MOUSE Ubiquitin-like protein 3 OS=Mus musculus GN=Ubl3 PE=1 SV=1
Length = 117
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 5 ELVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKD-KKIVPKTANDIKLISAGKI 63
+++ L+ L G F +SP + + + + ++ +WP D ++ + N ++LI G+
Sbjct: 8 DMINLRLILVSGK-TKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRF 66
Query: 64 LENNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQKKNFCSCSIL 118
L N T+G K+PFG+ T MH+V + L + ++ + + + C IL
Sbjct: 67 LHGNVTLGALKLPFGK----TTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL 117
>sp|P32628|RAD23_YEAST UV excision repair protein RAD23 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD23 PE=1 SV=1
Length = 398
Score = 32.3 bits (72), Expect = 0.98, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 6 LVELKFRLYDGSDIGPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKILE 65
+V L F+ + + P P++T+ K ++ + + + IKLI +GK+L+
Sbjct: 1 MVSLTFKNFKKEKV-PLDLEPSNTILETKTKL-------AQSISCEESQIKLIYSGKVLQ 52
Query: 66 NNKTVGQCKVPFGELPKGTITMHVVVQPPLTKAKTEKKLDEPQ 108
++KTV +C L G + +V Q TK K + P+
Sbjct: 53 DSKTVSECG-----LKDGDQVVFMVSQKKSTKTKVTEPPIAPE 90
>sp|Q6I7B0|MYG_AUXRO Myoglobin OS=Auxis rochei GN=mb PE=2 SV=3
Length = 147
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 20 GPFRYSPTSTVAMLKERIFSDWPKDKKIVPKTANDIKLISAGKILENNKTV---GQCKVP 76
GP + M+ R+F D P +K+ PK A I+AG + N G
Sbjct: 12 GPVEADFNTVGGMVLARLFKDHPDTQKLFPKFAG----IAAGDLAGNAAVAAHGGTVLKK 67
Query: 77 FGELPKGTITMHVVVQPPLTKAKTEKKL 104
GEL K +++P T+ K+
Sbjct: 68 LGELLKAKGNHAAIIKPLANSHATKHKI 95
>sp|A8ZUR6|SYH_DESOH Histidine--tRNA ligase OS=Desulfococcus oleovorans (strain DSM 6200
/ Hxd3) GN=hisS PE=3 SV=1
Length = 423
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 54 DIKLISAGKILENNKTVGQCKVPFGELPKGTITM 87
D ++ + IL N KT Q ++P G++P ITM
Sbjct: 383 DAEMETGSLILRNMKTKAQQEIPLGDVPGALITM 416
>sp|Q54TM2|LMD2B_DICDI LMBR1 domain-containing protein 2 homolog B OS=Dictyostelium
discoideum GN=DDB_G0281669 PE=3 SV=1
Length = 790
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 63 ILENNKTV-GQCKVPFGELPKGTITMH 88
++ENN+T+ G+C++P LP G IT
Sbjct: 99 VIENNETLTGECEIPVTYLPYGMITQQ 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,176,204
Number of Sequences: 539616
Number of extensions: 1740681
Number of successful extensions: 3812
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3787
Number of HSP's gapped (non-prelim): 29
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)