Query 033474
Match_columns 118
No_of_seqs 108 out of 133
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 03:37:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2av4_A Thioredoxin-like protei 100.0 1.5E-39 5.1E-44 246.7 10.8 106 13-118 55-160 (160)
2 1qgv_A Spliceosomal protein U5 99.9 4.3E-23 1.5E-27 144.5 10.3 108 11-118 35-142 (142)
3 3gix_A Thioredoxin-like protei 99.9 7.1E-22 2.4E-26 139.2 11.0 108 11-118 35-142 (149)
4 3m9j_A Thioredoxin; oxidoreduc 97.3 0.0014 4.6E-08 40.7 7.1 72 11-94 32-103 (105)
5 3tco_A Thioredoxin (TRXA-1); d 97.1 0.0036 1.2E-07 38.7 7.8 75 11-95 33-107 (109)
6 3zzx_A Thioredoxin; oxidoreduc 97.0 0.0032 1.1E-07 41.8 7.5 72 11-94 32-103 (105)
7 3qfa_C Thioredoxin; protein-pr 97.0 0.0025 8.7E-08 41.5 6.8 72 11-94 43-114 (116)
8 4euy_A Uncharacterized protein 97.0 0.0036 1.2E-07 39.6 7.3 75 11-96 30-104 (105)
9 3gnj_A Thioredoxin domain prot 96.9 0.0063 2.2E-07 38.0 7.9 75 11-95 34-108 (111)
10 3f3q_A Thioredoxin-1; His TAG, 96.8 0.0078 2.7E-07 38.6 7.4 72 11-94 36-107 (109)
11 2e0q_A Thioredoxin; electron t 96.7 0.012 4.1E-07 35.7 7.8 74 11-95 28-101 (104)
12 2trx_A Thioredoxin; electron t 96.7 0.021 7.1E-07 35.5 8.8 75 11-95 32-106 (108)
13 2vlu_A Thioredoxin, thioredoxi 96.6 0.0091 3.1E-07 38.3 7.1 73 11-95 46-118 (122)
14 3die_A Thioredoxin, TRX; elect 96.5 0.017 6E-07 35.5 7.7 73 11-93 31-103 (106)
15 3hz4_A Thioredoxin; NYSGXRC, P 96.5 0.0094 3.2E-07 40.0 6.9 81 11-101 36-116 (140)
16 2j23_A Thioredoxin; immune pro 96.5 0.0075 2.6E-07 39.4 6.2 74 11-95 45-119 (121)
17 1xwb_A Thioredoxin; dimerizati 96.5 0.021 7.1E-07 35.1 8.0 73 11-94 32-104 (106)
18 1ep7_A Thioredoxin CH1, H-type 96.5 0.016 5.4E-07 36.3 7.5 74 11-95 36-109 (112)
19 2i4a_A Thioredoxin; acidophIle 96.5 0.026 8.8E-07 34.8 8.3 74 11-94 32-105 (107)
20 2yzu_A Thioredoxin; redox prot 96.5 0.023 7.9E-07 34.8 7.9 75 11-95 30-104 (109)
21 1syr_A Thioredoxin; SGPP, stru 96.4 0.014 4.7E-07 37.3 6.6 72 11-94 38-109 (112)
22 1fb6_A Thioredoxin M; electron 96.3 0.031 1.1E-06 34.3 7.7 74 11-94 30-103 (105)
23 1v98_A Thioredoxin; oxidoreduc 96.2 0.042 1.4E-06 36.4 8.6 76 11-96 62-137 (140)
24 1thx_A Thioredoxin, thioredoxi 96.2 0.042 1.5E-06 34.2 8.2 75 11-95 37-111 (115)
25 1r26_A Thioredoxin; redox-acti 96.2 0.025 8.7E-07 37.7 7.5 73 11-95 49-121 (125)
26 3aps_A DNAJ homolog subfamily 96.2 0.031 1.1E-06 35.7 7.6 81 11-100 33-116 (122)
27 3hxs_A Thioredoxin, TRXP; elec 96.2 0.024 8.2E-07 37.2 7.1 75 11-95 63-137 (141)
28 1t00_A Thioredoxin, TRX; redox 96.1 0.034 1.2E-06 34.8 7.5 75 11-95 35-109 (112)
29 3p2a_A Thioredoxin 2, putative 96.1 0.037 1.3E-06 37.0 8.1 77 11-97 67-143 (148)
30 1dby_A Chloroplast thioredoxin 96.1 0.038 1.3E-06 34.3 7.6 75 11-95 31-105 (107)
31 2oe3_A Thioredoxin-3; electron 96.1 0.024 8.1E-07 36.9 6.9 71 11-93 42-112 (114)
32 1ti3_A Thioredoxin H, PTTRXH1; 96.0 0.049 1.7E-06 33.9 7.8 74 11-96 38-111 (113)
33 3uvt_A Thioredoxin domain-cont 96.0 0.043 1.5E-06 33.9 7.4 73 11-93 33-108 (111)
34 2vim_A Thioredoxin, TRX; thior 96.0 0.021 7.1E-07 35.0 5.8 72 11-94 31-102 (104)
35 2o8v_B Thioredoxin 1; disulfid 95.9 0.098 3.3E-06 34.7 9.3 75 11-95 52-126 (128)
36 1gh2_A Thioredoxin-like protei 95.9 0.023 8E-07 35.6 5.8 50 11-61 33-82 (107)
37 1w4v_A Thioredoxin, mitochondr 95.8 0.067 2.3E-06 34.6 8.0 75 11-95 43-117 (119)
38 3ul3_B Thioredoxin, thioredoxi 95.7 0.03 1E-06 36.7 6.2 54 11-64 54-107 (128)
39 3d22_A TRXH4, thioredoxin H-ty 95.7 0.05 1.7E-06 35.7 7.3 76 11-98 58-133 (139)
40 2dj1_A Protein disulfide-isome 95.6 0.066 2.3E-06 34.9 7.4 78 11-99 46-126 (140)
41 1x5d_A Protein disulfide-isome 95.5 0.11 3.7E-06 33.4 8.2 78 11-98 37-118 (133)
42 2l57_A Uncharacterized protein 95.4 0.082 2.8E-06 34.1 7.2 83 11-102 38-122 (126)
43 2ppt_A Thioredoxin-2; thiredox 95.4 0.11 3.8E-06 35.9 8.3 75 11-95 76-150 (155)
44 2dj0_A Thioredoxin-related tra 95.3 0.045 1.5E-06 36.2 5.8 77 12-88 39-122 (137)
45 3fk8_A Disulphide isomerase; A 95.3 0.068 2.3E-06 34.8 6.6 82 11-95 41-131 (133)
46 2i1u_A Thioredoxin, TRX, MPT46 95.3 0.061 2.1E-06 34.0 6.2 54 11-64 42-95 (121)
47 2dml_A Protein disulfide-isome 95.3 0.021 7.1E-07 36.9 4.0 77 11-96 47-123 (130)
48 2qsi_A Putative hydrogenase ex 95.2 0.023 7.8E-07 41.2 4.5 81 6-96 42-122 (137)
49 1nsw_A Thioredoxin, TRX; therm 95.2 0.066 2.3E-06 33.0 6.1 50 11-60 29-78 (105)
50 3h79_A Thioredoxin-like protei 95.2 0.092 3.1E-06 34.1 7.0 76 11-94 45-125 (127)
51 3dxb_A Thioredoxin N-terminall 95.1 0.28 9.5E-06 35.4 10.0 79 11-99 42-120 (222)
52 2dj3_A Protein disulfide-isome 95.0 0.16 5.5E-06 32.7 7.8 82 11-99 37-120 (133)
53 1x5e_A Thioredoxin domain cont 95.0 0.18 6.1E-06 32.5 7.9 73 11-94 34-107 (126)
54 2vm1_A Thioredoxin, thioredoxi 94.9 0.08 2.7E-06 33.2 5.8 77 11-99 40-116 (118)
55 3apq_A DNAJ homolog subfamily 94.8 0.12 4.2E-06 36.8 7.4 76 11-96 126-201 (210)
56 1mek_A Protein disulfide isome 94.7 0.041 1.4E-06 34.2 4.2 77 11-95 36-115 (120)
57 1nho_A Probable thioredoxin; b 94.7 0.17 5.7E-06 30.0 6.7 69 13-95 15-83 (85)
58 2qgv_A Hydrogenase-1 operon pr 94.7 0.034 1.2E-06 40.4 4.3 81 6-96 43-124 (140)
59 1xfl_A Thioredoxin H1; AT3G510 94.7 0.24 8.1E-06 32.5 8.1 73 11-95 50-122 (124)
60 2f51_A Thioredoxin; electron t 94.6 0.1 3.5E-06 33.9 6.0 49 11-60 35-83 (118)
61 1fo5_A Thioredoxin; disulfide 94.6 0.15 5.1E-06 30.2 6.3 68 13-94 16-83 (85)
62 1faa_A Thioredoxin F; electron 94.5 0.23 7.8E-06 31.7 7.5 72 11-94 49-121 (124)
63 2xc2_A Thioredoxinn; oxidoredu 94.5 0.22 7.4E-06 31.7 7.2 71 11-94 45-115 (117)
64 2voc_A Thioredoxin; electron t 94.4 0.14 4.7E-06 32.6 6.3 74 11-94 29-102 (112)
65 3d6i_A Monothiol glutaredoxin- 94.4 0.12 4.1E-06 32.4 5.9 74 11-96 33-108 (112)
66 3evi_A Phosducin-like protein 94.2 0.1 3.5E-06 35.6 5.5 53 11-67 35-87 (118)
67 3cxg_A Putative thioredoxin; m 94.0 0.16 5.3E-06 33.9 6.1 75 11-96 52-128 (133)
68 3ga4_A Dolichyl-diphosphooligo 93.9 0.093 3.2E-06 39.2 5.1 55 9-63 54-113 (178)
69 2l5l_A Thioredoxin; structural 93.8 0.38 1.3E-05 31.7 7.6 76 11-96 50-125 (136)
70 3idv_A Protein disulfide-isome 93.7 0.17 5.8E-06 35.7 6.1 73 12-95 160-235 (241)
71 3dml_A Putative uncharacterize 93.6 0.12 4E-06 36.2 5.1 82 11-102 30-115 (116)
72 2djk_A PDI, protein disulfide- 93.4 0.41 1.4E-05 31.9 7.3 78 13-99 36-117 (133)
73 2wz9_A Glutaredoxin-3; protein 93.2 0.22 7.6E-06 33.7 5.8 78 11-100 44-121 (153)
74 3emx_A Thioredoxin; structural 93.1 0.15 5.1E-06 33.9 4.8 79 11-101 43-130 (135)
75 2pu9_C TRX-F, thioredoxin F-ty 93.0 0.23 8E-06 31.1 5.3 73 11-95 36-109 (111)
76 1wmj_A Thioredoxin H-type; str 92.7 0.05 1.7E-06 34.8 1.9 76 12-99 49-124 (130)
77 3qou_A Protein YBBN; thioredox 92.7 0.23 8E-06 36.5 5.7 54 11-64 38-91 (287)
78 2l6c_A Thioredoxin; oxidoreduc 92.3 0.23 7.8E-06 31.6 4.6 74 11-95 31-104 (110)
79 1oaz_A Thioredoxin 1; immune s 92.1 0.19 6.6E-06 33.1 4.3 71 13-93 49-119 (123)
80 2djj_A PDI, protein disulfide- 91.7 0.74 2.5E-05 28.9 6.5 73 11-94 37-114 (121)
81 2dbc_A PDCL2, unnamed protein 91.5 0.53 1.8E-05 31.4 5.9 77 11-94 42-118 (135)
82 2es7_A Q8ZP25_salty, putative 91.4 0.16 5.3E-06 35.4 3.3 79 7-96 44-124 (142)
83 1a8l_A Protein disulfide oxido 91.0 1.4 4.9E-05 30.8 8.0 73 13-95 148-224 (226)
84 1wou_A Thioredoxin -related pr 90.9 0.31 1.1E-05 31.8 4.2 53 10-63 42-101 (123)
85 3idv_A Protein disulfide-isome 90.7 0.38 1.3E-05 33.9 4.7 77 11-98 44-123 (241)
86 1sen_A Thioredoxin-like protei 90.5 0.13 4.3E-06 35.9 2.1 89 11-99 58-150 (164)
87 2ywm_A Glutaredoxin-like prote 90.2 2.3 7.7E-05 30.1 8.5 77 11-97 37-115 (229)
88 2yj7_A LPBCA thioredoxin; oxid 89.4 0.06 2E-06 32.6 0.0 50 11-60 31-80 (106)
89 1a8l_A Protein disulfide oxido 89.8 1.4 4.9E-05 30.8 7.2 77 11-97 35-113 (226)
90 3f9u_A Putative exported cytoc 89.8 0.98 3.3E-05 30.6 6.1 83 12-103 60-172 (172)
91 3q6o_A Sulfhydryl oxidase 1; p 89.8 0.82 2.8E-05 33.1 6.0 51 11-61 42-97 (244)
92 3ph9_A Anterior gradient prote 86.7 0.57 2E-05 33.3 3.4 86 11-99 56-147 (151)
93 2r2j_A Thioredoxin domain-cont 85.9 1.7 6E-05 33.8 6.1 56 11-66 34-95 (382)
94 2lrn_A Thiol:disulfide interch 85.7 5.6 0.00019 26.0 8.7 78 13-102 43-146 (152)
95 2kuc_A Putative disulphide-iso 85.7 2.8 9.6E-05 26.6 6.1 76 12-96 40-120 (130)
96 1a0r_P Phosducin, MEKA, PP33; 85.5 1.1 3.9E-05 34.4 4.8 52 11-64 145-196 (245)
97 2fwh_A Thiol:disulfide interch 85.4 0.64 2.2E-05 30.6 2.9 74 11-94 43-125 (134)
98 3ed3_A Protein disulfide-isome 85.0 2.2 7.4E-05 32.7 6.2 54 11-64 47-102 (298)
99 1zma_A Bacterocin transport ac 84.8 2.9 9.9E-05 26.4 5.8 52 11-65 41-98 (118)
100 2hls_A Protein disulfide oxido 84.5 2.8 9.7E-05 31.0 6.5 73 13-98 41-118 (243)
101 2b5e_A Protein disulfide-isome 84.4 1.4 4.7E-05 35.3 5.0 54 11-64 43-97 (504)
102 3f8u_A Protein disulfide-isome 84.0 1.4 4.9E-05 34.8 4.9 54 11-65 33-86 (481)
103 2fgx_A Putative thioredoxin; N 83.5 0.67 2.3E-05 31.8 2.5 54 10-66 39-92 (107)
104 3qcp_A QSOX from trypanosoma b 82.0 4.7 0.00016 34.3 7.6 85 11-95 54-150 (470)
105 2lst_A Thioredoxin; structural 82.1 0.31 1E-05 31.4 0.0 85 11-103 31-122 (130)
106 3apo_A DNAJ homolog subfamily 80.9 2 6.8E-05 36.4 4.9 55 11-66 145-199 (780)
107 2ju5_A Thioredoxin disulfide i 80.0 7.7 0.00026 26.1 6.8 76 11-96 60-151 (154)
108 2ywm_A Glutaredoxin-like prote 79.2 6.8 0.00023 27.5 6.6 74 13-100 150-223 (229)
109 3hcz_A Possible thiol-disulfid 78.7 10 0.00034 24.0 7.3 32 13-44 45-77 (148)
110 3ira_A Conserved protein; meth 78.5 3.5 0.00012 30.1 5.0 50 11-60 51-111 (173)
111 3t58_A Sulfhydryl oxidase 1; o 77.8 4.5 0.00015 34.1 6.1 77 11-97 42-127 (519)
112 3f8u_A Protein disulfide-isome 77.4 9.9 0.00034 30.0 7.7 76 11-95 382-459 (481)
113 3us3_A Calsequestrin-1; calciu 76.4 8.3 0.00029 30.0 6.9 54 12-65 46-103 (367)
114 2hls_A Protein disulfide oxido 76.4 19 0.00065 26.4 8.6 78 13-104 152-233 (243)
115 2qc7_A ERP31, ERP28, endoplasm 76.2 3.3 0.00011 31.6 4.4 50 14-64 36-94 (240)
116 3apo_A DNAJ homolog subfamily 75.8 10 0.00035 32.1 7.7 79 11-98 687-768 (780)
117 2dlx_A UBX domain-containing p 75.7 16 0.00054 25.9 7.7 78 11-99 54-138 (153)
118 1ego_A Glutaredoxin; electron 74.2 3.1 0.00011 24.7 3.1 67 11-96 11-83 (85)
119 2c0g_A ERP29 homolog, windbeut 73.0 5.2 0.00018 30.8 4.9 72 14-95 47-130 (248)
120 1sji_A Calsequestrin 2, calseq 71.1 9.9 0.00034 29.0 6.0 47 18-64 53-100 (350)
121 2trc_P Phosducin, MEKA, PP33; 70.7 5.9 0.0002 29.2 4.6 52 12-66 133-184 (217)
122 2b5x_A YKUV protein, TRXY; thi 69.6 18 0.00061 22.7 7.8 30 11-40 41-70 (148)
123 3uem_A Protein disulfide-isome 69.5 22 0.00076 26.7 7.6 50 11-62 279-330 (361)
124 1ilo_A Conserved hypothetical 69.5 8.6 0.00029 22.1 4.3 51 10-65 10-60 (77)
125 3kp8_A Vkorc1/thioredoxin doma 67.9 4.5 0.00016 26.3 3.1 43 11-59 24-72 (106)
126 1lu4_A Soluble secreted antige 67.8 19 0.00065 22.3 6.5 74 11-95 36-134 (136)
127 1ttz_A Conserved hypothetical 65.4 7.7 0.00026 24.9 3.8 64 11-94 11-74 (87)
128 2b5e_A Protein disulfide-isome 64.7 13 0.00045 29.6 5.8 75 11-95 388-465 (504)
129 3ia1_A THIO-disulfide isomeras 64.5 25 0.00086 22.5 6.5 81 12-103 43-150 (154)
130 2ywi_A Hypothetical conserved 62.8 32 0.0011 23.1 6.8 98 12-112 59-192 (196)
131 3fkf_A Thiol-disulfide oxidore 61.7 27 0.00092 21.9 8.2 72 13-96 47-145 (148)
132 3uem_A Protein disulfide-isome 61.0 25 0.00086 26.4 6.5 78 13-99 149-232 (361)
133 1z6n_A Hypothetical protein PA 59.1 10 0.00034 27.0 3.7 50 12-63 67-119 (167)
134 2zci_A Phosphoenolpyruvate car 55.7 8.4 0.00029 34.6 3.4 37 68-110 95-131 (610)
135 3mjd_A Orotate phosphoribosylt 52.1 5.1 0.00017 30.8 1.3 23 67-94 10-32 (232)
136 3or5_A Thiol:disulfide interch 51.0 46 0.0016 21.3 8.0 32 12-43 47-79 (165)
137 2lja_A Putative thiol-disulfid 50.5 46 0.0016 21.1 7.8 78 13-99 44-145 (152)
138 3gl3_A Putative thiol:disulfid 50.1 46 0.0016 21.1 8.0 31 13-43 42-73 (152)
139 2f9s_A Thiol-disulfide oxidore 48.6 50 0.0017 21.1 7.6 78 12-99 39-140 (151)
140 3iv4_A Putative oxidoreductase 47.4 19 0.00064 25.1 3.5 56 10-68 35-95 (112)
141 1o73_A Tryparedoxin; electron 44.8 45 0.0015 21.0 4.8 31 11-41 40-72 (144)
142 1i5g_A Tryparedoxin II; electr 44.1 51 0.0017 20.9 5.0 30 12-41 41-72 (144)
143 3fw2_A Thiol-disulfide oxidore 43.3 63 0.0022 20.7 8.8 72 14-97 50-148 (150)
144 3hdc_A Thioredoxin family prot 43.2 66 0.0023 20.9 5.7 30 12-41 54-84 (158)
145 1wjk_A C330018D20RIK protein; 42.7 15 0.00052 23.4 2.3 48 11-65 27-76 (100)
146 1zzo_A RV1677; thioredoxin fol 41.2 59 0.002 19.8 6.5 29 11-40 37-65 (136)
147 1hyu_A AHPF, alkyl hydroperoxi 40.9 40 0.0014 27.4 5.0 52 12-66 130-181 (521)
148 3s9f_A Tryparedoxin; thioredox 39.7 65 0.0022 21.6 5.3 31 12-42 61-93 (165)
149 3erw_A Sporulation thiol-disul 38.8 68 0.0023 19.8 6.0 30 12-41 47-77 (145)
150 3oov_A Methyl-accepting chemot 38.4 18 0.00062 22.8 2.1 38 2-39 2-44 (169)
151 2faf_A Phosphoenolpyruvate car 38.3 19 0.00064 32.4 2.8 28 83-110 104-131 (608)
152 2dyy_A UPF0076 protein PH0854; 36.5 14 0.00049 25.0 1.5 37 15-51 56-94 (126)
153 3k12_A Uncharacterized protein 36.3 10 0.00036 25.9 0.7 37 15-51 44-82 (122)
154 3gtz_A Putative translation in 35.6 10 0.00035 26.0 0.6 37 15-51 46-84 (124)
155 3u5i_q A0, L10E, 60S acidic ri 33.6 33 0.0011 27.7 3.3 76 18-95 9-103 (312)
156 1gxg_A Colicin E8 immunity pro 33.5 21 0.00072 24.1 1.9 16 84-99 11-26 (85)
157 3ha9_A Uncharacterized thiored 33.4 98 0.0034 20.0 7.7 27 13-40 51-77 (165)
158 1fr2_A Colicin E9 immunity pro 33.2 21 0.00071 24.2 1.8 17 83-99 10-26 (86)
159 2wvq_A Small S protein; prion- 33.0 27 0.00092 26.6 2.6 24 72-95 144-167 (225)
160 2zmf_A CAMP and CAMP-inhibited 32.6 33 0.0011 22.0 2.7 27 15-41 27-58 (189)
161 3raz_A Thioredoxin-related pro 31.9 1E+02 0.0035 19.7 8.0 83 12-104 37-147 (151)
162 3moe_A Phosphoenolpyruvate car 31.7 18 0.00063 32.5 1.7 27 84-110 120-146 (624)
163 1qu9_A YJGF protein; structura 31.6 13 0.00045 25.3 0.6 37 15-51 55-93 (128)
164 3lwa_A Secreted thiol-disulfid 31.1 1.2E+02 0.004 20.2 7.4 29 13-41 73-108 (183)
165 1unk_A Colicin E7; immunity pr 30.9 23 0.0008 24.2 1.8 17 83-99 10-26 (87)
166 3kcm_A Thioredoxin family prot 30.7 1E+02 0.0035 19.4 5.5 31 12-42 41-72 (154)
167 1qd9_A Purine regulatory prote 30.6 17 0.00059 24.6 1.1 38 14-51 53-92 (124)
168 3kjj_A NMB1025 protein; YJGF p 30.3 14 0.00049 25.6 0.6 37 15-51 52-90 (128)
169 3jsy_A Acidic ribosomal protei 30.3 27 0.00092 26.4 2.2 75 19-95 7-102 (213)
170 1qah_A Perchloric acid soluble 29.2 15 0.00052 25.4 0.6 37 15-51 59-97 (136)
171 2e7p_A Glutaredoxin; thioredox 29.1 38 0.0013 20.9 2.5 47 11-65 30-83 (116)
172 2cvl_A TTHA0137, protein trans 29.0 19 0.00065 24.3 1.1 38 14-51 53-92 (124)
173 2k8s_A Thioredoxin; dimer, str 28.9 34 0.0012 20.2 2.1 50 11-64 12-64 (80)
174 1x25_A Hypothetical UPF0076 pr 28.8 16 0.00054 25.0 0.6 37 15-51 58-96 (128)
175 3i7t_A RV2704, putative unchar 28.7 16 0.00053 26.3 0.6 37 15-51 50-88 (149)
176 3m1x_A Putative endoribonuclea 28.5 16 0.00054 26.0 0.6 35 16-50 80-116 (148)
177 3l7q_A Putative translation in 28.0 18 0.00061 24.6 0.8 36 16-51 56-93 (125)
178 2b1k_A Thiol:disulfide interch 27.2 1.1E+02 0.0036 19.9 4.5 24 12-38 64-87 (168)
179 1o8x_A Tryparedoxin, TRYX, TXN 27.0 1.2E+02 0.0042 19.1 5.5 30 12-41 41-72 (146)
180 3v4d_A Aminoacrylate peracid r 26.8 18 0.00061 24.9 0.6 37 15-51 63-101 (134)
181 3r0p_A L-PSP putative endoribo 26.8 18 0.00063 24.5 0.7 37 15-51 58-96 (127)
182 2cwj_A Putative endonuclease; 26.7 17 0.00059 24.5 0.5 37 15-51 50-88 (123)
183 1jd1_A Hypothetical 13.9 kDa p 26.7 18 0.00062 24.7 0.6 36 15-50 58-95 (129)
184 3vcz_A Endoribonuclease L-PSP; 26.4 16 0.00054 26.2 0.3 36 15-50 79-116 (153)
185 1xrg_A Putative translation in 26.3 18 0.00062 26.0 0.6 37 15-51 87-125 (156)
186 2ewc_A Conserved hypothetical 26.2 16 0.00053 25.2 0.2 36 16-51 48-85 (126)
187 3u43_A Colicin-E2 immunity pro 25.6 33 0.0011 23.7 1.8 17 83-99 10-26 (94)
188 3kp9_A Vkorc1/thioredoxin doma 25.3 26 0.0009 27.7 1.4 63 12-93 210-276 (291)
189 3quw_A Protein MMF1; chorismat 25.3 20 0.00067 25.9 0.6 36 15-50 82-119 (153)
190 2k0d_X IMME7, colicin-E7 immun 24.7 33 0.0011 24.2 1.7 18 82-99 16-33 (101)
191 2b33_A Protein synthesis inhib 24.5 21 0.00071 25.1 0.6 36 15-50 68-105 (140)
192 2ig8_A Hypothetical protein PA 24.2 21 0.00073 24.7 0.6 36 16-51 63-100 (144)
193 2cvb_A Probable thiol-disulfid 24.1 1.6E+02 0.0056 19.5 6.5 28 12-39 46-73 (188)
194 3k2n_A Sigma-54-dependent tran 23.9 61 0.0021 20.7 2.8 33 9-41 13-50 (177)
195 3k0t_A Endoribonuclease L-PSP, 23.7 23 0.00078 25.0 0.7 36 16-51 74-111 (143)
196 1pf5_A Hypothetical protein YJ 23.5 20 0.00067 24.5 0.3 36 16-51 59-97 (131)
197 3i3f_A Hypothetical protein; s 22.8 26 0.00088 24.4 0.9 35 16-50 67-106 (141)
198 1kng_A Thiol:disulfide interch 22.3 1.5E+02 0.0052 18.6 5.8 26 12-39 55-80 (156)
199 3lyb_A Putative endoribonuclea 21.9 26 0.00091 25.4 0.8 36 16-51 79-116 (165)
200 1kte_A Thioltransferase; redox 21.5 66 0.0023 19.6 2.5 51 11-66 22-79 (105)
201 2hze_A Glutaredoxin-1; thiored 21.3 48 0.0016 21.2 1.9 51 11-66 29-86 (114)
202 2gpr_A Glucose-permease IIA co 21.0 43 0.0015 24.4 1.8 18 94-111 27-44 (154)
203 1v5r_A Growth-arrest-specific 21.0 57 0.0019 22.9 2.3 50 16-73 9-63 (97)
No 1
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=100.00 E-value=1.5e-39 Score=246.69 Aligned_cols=106 Identities=78% Similarity=1.313 Sum_probs=98.7
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHHH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIV 92 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDIi 92 (118)
-|++|+.+|.++|++.++.+.||.||++|+|++.++|++.+++|+|||++++|++||+|||||||++|++++||+|+++|
T Consensus 55 PCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~i 134 (160)
T 2av4_A 55 DCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIV 134 (160)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHH
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccCceeEEccCCcccccCC
Q 033474 93 ETVYRGARKGRGLVIAPKDYSTKYRY 118 (118)
Q Consensus 93 E~iyRgA~kGkglV~SP~dys~~~~~ 118 (118)
|.+||||+||||||+||+||||+|||
T Consensus 135 e~~~r~a~~g~~~v~~p~~~~~~~~~ 160 (160)
T 2av4_A 135 ETIFRGARKGRGLVISPKDYSTKYKY 160 (160)
T ss_dssp HHHHHHHHTTCSEEECSSCC------
T ss_pred HHHHHHhhcCCeEEECCCccchhccC
Confidence 99999999999999999999999987
No 2
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.89 E-value=4.3e-23 Score=144.45 Aligned_cols=108 Identities=81% Similarity=1.311 Sum_probs=91.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++-..++.||+++-|++.+-|.+...+|++||-+++.+..++|+|++++++|+++++++|++
T Consensus 35 C~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~ 114 (142)
T 1qgv_A 35 DPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVD 114 (142)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHH
Confidence 45699999999999999876688899999999999999999888888888889999999999999999999999999999
Q ss_pred HHHHHhhccccCceeEEccCCcccccCC
Q 033474 91 IVETVYRGARKGRGLVIAPKDYSTKYRY 118 (118)
Q Consensus 91 IiE~iyRgA~kGkglV~SP~dys~~~~~ 118 (118)
+|+.+++||++||||++||+|||++|||
T Consensus 115 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (142)
T 1qgv_A 115 IIETVYRGARKGRGLVVSPKDYSTKYRY 142 (142)
T ss_dssp HHHHHHHHHTTTCSEEECCCCCC-----
T ss_pred HHHHHHHHHhcCCeEEeCCCCccccccC
Confidence 9999999999999999999999999998
No 3
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.87 E-value=7.1e-22 Score=139.22 Aligned_cols=108 Identities=31% Similarity=0.624 Sum_probs=100.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.+|...|.+++++.++-..++.||+++.|++.+.|.+.-.+|++||-+++.+++|+|+|++.++.+++.++++|++
T Consensus 35 C~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~ 114 (149)
T 3gix_A 35 DPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFID 114 (149)
T ss_dssp SHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHH
Confidence 34699999999999999988889999999999999999999665565688889999999999999999999999999999
Q ss_pred HHHHHhhccccCceeEEccCCcccccCC
Q 033474 91 IVETVYRGARKGRGLVIAPKDYSTKYRY 118 (118)
Q Consensus 91 IiE~iyRgA~kGkglV~SP~dys~~~~~ 118 (118)
.++.+++||++|||+|.||++|++++++
T Consensus 115 ~l~~~~~~~~~g~~~~~s~~~~~~~~~~ 142 (149)
T 3gix_A 115 LIEVIYRGAMRGKLIVQSPIDPKNIPKY 142 (149)
T ss_dssp HHHHHHHHHHTTCSEEECCSCGGGSCCC
T ss_pred HHHHHHHHhhcCCceEECCccccccccc
Confidence 9999999999999999999999998775
No 4
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.27 E-value=0.0014 Score=40.74 Aligned_cols=72 Identities=17% Similarity=0.237 Sum_probs=55.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++ ..++.+|.++-|++.+.|.+..-+|+++|-+++.+. ++.+. +.+++.+
T Consensus 32 C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~g~--~~~~l~~ 99 (105)
T 3m9j_A 32 CGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVG---------EFSGA--NKEKLEA 99 (105)
T ss_dssp CHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEE---------EEESS--CHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEE---------EEeCC--CHHHHHH
Confidence 45799999999999999888 777899999999999999998877876774444432 23333 5677777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 100 ~l~~ 103 (105)
T 3m9j_A 100 TINE 103 (105)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 5
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.09 E-value=0.0036 Score=38.71 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=56.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++-..++.+|+++-|++.+.|.+..-+|++|| ++..+.- ++.+ ..+.++|.+
T Consensus 33 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~--------~~~g-~~~~~~l~~ 102 (109)
T 3tco_A 33 CAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIF-VNGQLVD--------SLVG-AVDEDTLES 102 (109)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEEE--------EEES-CCCHHHHHH
T ss_pred CHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEE-cCCcEEE--------eeec-cCCHHHHHH
Confidence 45799999999999999887678899999999999999999877776666 4433221 1222 235678888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 103 ~l~~~ 107 (109)
T 3tco_A 103 TVNKY 107 (109)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 6
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.04 E-value=0.0032 Score=41.75 Aligned_cols=72 Identities=17% Similarity=0.276 Sum_probs=54.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+--|..|...+.+++++.++. .++-||+++-|+..+-|.+.--+|++||-+++-+ + ++.++ +++++.+
T Consensus 32 C~~C~~~~p~~~~~~~~~~~~-~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v--~-------~~~G~--~~~~l~~ 99 (105)
T 3zzx_A 32 CGPCKMIAPKLEELSQSMSDV-VFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKL--D-------SLSGA--NYDKLLE 99 (105)
T ss_dssp CHHHHHHHHHHHHHHHHCTTE-EEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE--E-------EEESC--CHHHHHH
T ss_pred CCCccCCCcchhhhhhccCCe-EEEEEecccCHHHHHHcCCCeecEEEEEECCEEE--E-------EEeCc--CHHHHHH
Confidence 346999999999999988774 5788999999999999999776687666444432 2 33442 5677777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.|+.
T Consensus 100 ~i~k 103 (105)
T 3zzx_A 100 LVEK 103 (105)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7763
No 7
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.02 E-value=0.0025 Score=41.53 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=54.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-++..+.|.+.--+|++||-+++.+. ++.+. +.+++.+
T Consensus 43 C~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~--~~~~l~~ 110 (116)
T 3qfa_C 43 CGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVG---------EFSGA--NKEKLEA 110 (116)
T ss_dssp CHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEEE---------EEESC--CHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEEE---------EEcCC--CHHHHHH
Confidence 45799999999999999888 778899999999999999997767766663333322 23333 6677777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.|+.
T Consensus 111 ~l~~ 114 (116)
T 3qfa_C 111 TINE 114 (116)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 8
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.00 E-value=0.0036 Score=39.57 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=46.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++..+ ..++.||+++-|+..+.|.+..-+|+++|-+++-+ + ++.+ ..+++++.+
T Consensus 30 C~~C~~~~p~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~-------~~~g-~~~~~~l~~ 98 (105)
T 4euy_A 30 CGVCDVMLRKVNYVLENYNY-VEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI--L-------RESR-FISLENLER 98 (105)
T ss_dssp CHHHHHHHHHHHHHHHTCTT-EEEEEEEECCC---------CCCCEEEEEETTEEE--E-------EEES-SCCHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCC-ceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE--E-------EEeC-CcCHHHHHH
Confidence 45799999999999998865 67789999999999999999876776666433322 1 1222 236788888
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.++..+
T Consensus 99 ~l~~~~ 104 (105)
T 4euy_A 99 TIQLFE 104 (105)
T ss_dssp HHHTTC
T ss_pred HHHHhh
Confidence 877543
No 9
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.94 E-value=0.0063 Score=37.99 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=55.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++-..++.||+++-|++.+-|.+.--+|++||-+++.+.- +.+ ..+.+++..
T Consensus 34 C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~---------~~g-~~~~~~l~~ 103 (111)
T 3gnj_A 34 CHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGK---------MAG-DVEDDEVEQ 103 (111)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEE---------EES-SCCHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEEEE---------Eec-cCCHHHHHH
Confidence 4579999999999999988667889999999999999999977667666644443321 111 235677777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 104 ~l~~~ 108 (111)
T 3gnj_A 104 MIADV 108 (111)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 10
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.76 E-value=0.0078 Score=38.64 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=52.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+--|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|++||-+++-+. ++.+. +.+++.+
T Consensus 36 C~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~--~~~~l~~ 103 (109)
T 3f3q_A 36 CGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVA---------KVVGA--NPAAIKQ 103 (109)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEESS--CHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEE---------EEeCC--CHHHHHH
Confidence 45799999999999999887 677899999999999999997766766664444332 23333 4466666
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.|+.
T Consensus 104 ~i~~ 107 (109)
T 3f3q_A 104 AIAA 107 (109)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6653
No 11
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.73 E-value=0.012 Score=35.75 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=53.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++ ..++.+|+++-+++.+-|.+..-+|+++|-+++.+. ++.+ ..+.+++.+
T Consensus 28 C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~g-~~~~~~l~~ 96 (104)
T 2e0q_A 28 CAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVD---------EIIG-AVPREEIEI 96 (104)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEE---------EEES-CCCHHHHHH
T ss_pred ChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECCeEhh---------hccC-CCCHHHHHH
Confidence 45799999999999999888 888999999999999999997766766663333322 1122 234677777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 97 ~l~~~ 101 (104)
T 2e0q_A 97 RIKNL 101 (104)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 12
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.68 E-value=0.021 Score=35.53 Aligned_cols=75 Identities=11% Similarity=0.123 Sum_probs=54.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.+.-..++.+|+++-|++.+-|.+.--+|+++|-+++-+. ++.+ ..+.+++.+
T Consensus 32 C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~G-~~~~~~l~~ 101 (108)
T 2trx_A 32 CGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAA---------TKVG-ALSKGQLKE 101 (108)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEEEE---------EEES-CCCHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEEEE---------EEec-CCCHHHHHH
Confidence 457999999999999988766888999999999999999997766766663333322 1222 235677887
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 102 ~l~~~ 106 (108)
T 2trx_A 102 FLDAN 106 (108)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 13
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.64 E-value=0.0091 Score=38.26 Aligned_cols=73 Identities=21% Similarity=0.275 Sum_probs=54.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++..+. .++.+.. ++++.+
T Consensus 46 C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~--------~~~~G~~--~~~l~~ 113 (122)
T 2vlu_A 46 CGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTFLFM-KEGDVK--------DRVVGAI--KEELTA 113 (122)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE--------EEEESSC--HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCEEE--------EEEeCcC--HHHHHH
Confidence 45799999999999999888 77889999999999999999776676555 443221 1334444 678888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 114 ~l~~~ 118 (122)
T 2vlu_A 114 KVGLH 118 (122)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 14
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=96.54 E-value=0.017 Score=35.51 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=53.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.++-..++.+|+++-|+..+.|.+..-+|+++|-+++.+.- +.+ ..+.+++..
T Consensus 31 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~---------~~g-~~~~~~l~~ 100 (106)
T 3die_A 31 CGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDK---------VVG-FQPKENLAE 100 (106)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEE---------EES-CCCHHHHHH
T ss_pred CHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEEEE---------EeC-CCCHHHHHH
Confidence 4579999999999999988768889999999999999999977667656543433321 111 234567766
Q ss_pred HHH
Q 033474 91 IVE 93 (118)
Q Consensus 91 IiE 93 (118)
.++
T Consensus 101 ~l~ 103 (106)
T 3die_A 101 VLD 103 (106)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 15
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.54 E-value=0.0094 Score=39.97 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=60.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++-..++.||+++-|++.+-|.+..-+|+++|-+++-+ . ++.+ ..+.++|.+
T Consensus 36 C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~-------~~~G-~~~~~~l~~ 105 (140)
T 3hz4_A 36 CPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPV--W-------EQVG-QIYPSILKN 105 (140)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEE--E-------EEES-SCCHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEE--E-------EEcC-CCCHHHHHH
Confidence 45799999999999999988788899999999999999999665576666333322 1 1222 245688999
Q ss_pred HHHHHhhcccc
Q 033474 91 IVETVYRGARK 101 (118)
Q Consensus 91 IiE~iyRgA~k 101 (118)
.|+.+...+.+
T Consensus 106 ~l~~~l~~~~~ 116 (140)
T 3hz4_A 106 AVRDMLQHGEE 116 (140)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhccccc
Confidence 98888766544
No 16
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.53 E-value=0.0075 Score=39.38 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=53.5
Q ss_pred HHHHHhhHHHHHHhHHhhccc-eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHH
Q 033474 11 LILNLEMDEVLSSVAETIKNF-AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFI 89 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefI 89 (118)
.-.|..+...|.+++++.++- ..++.||+++-+++.+-|.+..-+|+++|-+++-+. ++.+. +++++.
T Consensus 45 C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~--~~~~l~ 113 (121)
T 2j23_A 45 CGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKID---------TVVGA--DPSKLQ 113 (121)
T ss_dssp CSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEE---------EEESS--CHHHHH
T ss_pred CHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEe---------eEcCC--CHHHHH
Confidence 346999999999999988764 677899999999999999997766766653333322 22333 567777
Q ss_pred HHHHHH
Q 033474 90 DIVETV 95 (118)
Q Consensus 90 DIiE~i 95 (118)
+.|+.+
T Consensus 114 ~~l~~~ 119 (121)
T 2j23_A 114 AAITQH 119 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777653
No 17
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.52 E-value=0.021 Score=35.14 Aligned_cols=73 Identities=14% Similarity=0.213 Sum_probs=53.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.+.-..++.+|.++-+++.+-|.+..-+|+++|-+++-+. ++.+ .+.+++.+
T Consensus 32 C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~g--~~~~~l~~ 100 (106)
T 1xwb_A 32 CGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVE---------EFAG--ANAKRLED 100 (106)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEES--CCHHHHHH
T ss_pred CHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEE---------EEcC--CCHHHHHH
Confidence 457999999999999988666788999999999999999997766766654444332 2223 24566777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 101 ~i~~ 104 (106)
T 1xwb_A 101 VIKA 104 (106)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 18
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.52 E-value=0.016 Score=36.32 Aligned_cols=74 Identities=8% Similarity=0.064 Sum_probs=54.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.+.=..++.||.++-+++.+-|.+..-+|+++| ++..+.- ++.+. +.+++.+
T Consensus 36 C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G~--~~~~l~~ 104 (112)
T 1ep7_A 36 CGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVY-KDGVKAD--------DLVGA--SQDKLKA 104 (112)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEE-ETTEEEE--------EEESC--CHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEE-ECCeEEE--------EEcCC--CHHHHHH
Confidence 45799999999999998874567789999999999999999776676555 4433211 23333 5678888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 105 ~l~~~ 109 (112)
T 1ep7_A 105 LVAKH 109 (112)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 19
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.51 E-value=0.026 Score=34.78 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=53.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.++-..++.+|+++-+++.+-|.+..-+|+++|-+++-+.- +.+ ..+++++.+
T Consensus 32 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~---------~~G-~~~~~~l~~ 101 (107)
T 2i4a_A 32 CGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDK---------KVG-ALPKSQLKA 101 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEE---------EES-CCCHHHHHH
T ss_pred ChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEEEE---------ecC-CCCHHHHHH
Confidence 4579999999999999988667889999999999999999877667666633333221 112 235677777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 102 ~l~~ 105 (107)
T 2i4a_A 102 WVES 105 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 20
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.46 E-value=0.023 Score=34.84 Aligned_cols=75 Identities=15% Similarity=0.200 Sum_probs=54.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.+.-..++.+|+++-+++.+-|.+..-+|+++|-+++.+..- .+ ..+.+++.+
T Consensus 30 C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~---------~g-~~~~~~l~~ 99 (109)
T 2yzu_A 30 CAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPVEVL---------VG-AQPKRNYQA 99 (109)
T ss_dssp CHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEE---------ES-CCCHHHHHH
T ss_pred CHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEeeeE---------eC-CCCHHHHHH
Confidence 45799999999999999885577899999999999999999776676666334433221 12 235677777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 100 ~l~~~ 104 (109)
T 2yzu_A 100 KIEKH 104 (109)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 77643
No 21
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.37 E-value=0.014 Score=37.26 Aligned_cols=72 Identities=15% Similarity=0.205 Sum_probs=52.3
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++.-+ ++ ++.+. ++++|.+
T Consensus 38 C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~-------~~~G~--~~~~l~~ 105 (112)
T 1syr_A 38 CGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFKVY-KNGSS-VD-------TLLGA--NDSALKQ 105 (112)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEE-ETTEE-EE-------EEESC--CHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEEEE-ECCcE-EE-------EEeCC--CHHHHHH
Confidence 45799999999999998877 66788999999999999998665576555 43222 11 23333 6788877
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 106 ~l~~ 109 (112)
T 1syr_A 106 LIEK 109 (112)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7764
No 22
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.29 E-value=0.031 Score=34.30 Aligned_cols=74 Identities=22% Similarity=0.265 Sum_probs=52.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.+.=..++.||+++-|++.+-|.+.--+|+++|-+++.+. ++.+. .+.+++.+
T Consensus 30 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~G~-~~~~~l~~ 99 (105)
T 1fb6_A 30 CGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKE---------SIIGA-VPKSTLTD 99 (105)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEEEC-CCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEE---------EEecC-CCHHHHHH
Confidence 457999999999999988765778899999999999999986655765553333322 12222 34567777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 100 ~l~~ 103 (105)
T 1fb6_A 100 SIEK 103 (105)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 23
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.21 E-value=0.042 Score=36.38 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=55.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.++=..++.||+++-+++.+-|.+..-+|+++|-+++-+. ++.+. .+.+++.+
T Consensus 62 C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~-~~~~~l~~ 131 (140)
T 1v98_A 62 CGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVA---------TWVGA-SPRRVLEE 131 (140)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEESC-CCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEE---------EEeCC-CCHHHHHH
Confidence 457999999999999998755788999999999999999997766765553333322 22222 34678888
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.|+.+-
T Consensus 132 ~i~~~l 137 (140)
T 1v98_A 132 RLRPYL 137 (140)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 24
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=96.21 E-value=0.042 Score=34.20 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=54.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.+.-..++.+|+++-+++.+-|.+..-+|+++| ++..+.-. +.+ ..+.+++.+
T Consensus 37 C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~--------~~g-~~~~~~l~~ 106 (115)
T 1thx_A 37 CGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV-KGEQILDS--------TEG-VISKDKLLS 106 (115)
T ss_dssp CTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE-ETTEEEEE--------EES-CCCHHHHHH
T ss_pred CHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE-cCCEEEEE--------ecC-CCCHHHHHH
Confidence 34699999999999998875578899999999999999999776676566 54333211 112 235688888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 107 ~l~~~ 111 (115)
T 1thx_A 107 FLDTH 111 (115)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 25
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.20 E-value=0.025 Score=37.71 Aligned_cols=73 Identities=7% Similarity=0.073 Sum_probs=53.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|++|| ++..+. + ++.+ .+.+++.+
T Consensus 49 C~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~-~~G~~~-~-------~~~G--~~~~~l~~ 116 (125)
T 1r26_A 49 CGPCKTIERPMEKIAYEFPT-VKFAKVDADNNSEIVSKCRVLQLPTFIIA-RSGKML-G-------HVIG--ANPGMLRQ 116 (125)
T ss_dssp CHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES--SCHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCeEE-E-------EEeC--CCHHHHHH
Confidence 45799999999999998876 56789999999999999999776676555 443321 1 3333 25577877
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.|+.+
T Consensus 117 ~l~~~ 121 (125)
T 1r26_A 117 KLRDI 121 (125)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 26
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.17 E-value=0.031 Score=35.69 Aligned_cols=81 Identities=11% Similarity=0.021 Sum_probs=60.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEee---cCChhh
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA---LKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~---~~~kQe 87 (118)
+-.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++|-+++. -.++.+. -.+.++
T Consensus 33 C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~---------~~~~~g~~~~~~~~~~ 103 (122)
T 3aps_A 33 CGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERA---------KKSIWEEQINSRDAKT 103 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGG---------GTEEEEEEECCSCHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCc---------cceeeccccCcCCHHH
Confidence 4579999999999999988557788999999999999999977667655533332 1234443 257789
Q ss_pred HHHHHHHHhhccc
Q 033474 88 FIDIVETVYRGAR 100 (118)
Q Consensus 88 fIDIiE~iyRgA~ 100 (118)
+.+.++.+-..+.
T Consensus 104 l~~~l~~~l~~~~ 116 (122)
T 3aps_A 104 IAALIYGKLETLQ 116 (122)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhhh
Confidence 9999988876553
No 27
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=96.16 E-value=0.024 Score=37.24 Aligned_cols=75 Identities=12% Similarity=0.145 Sum_probs=55.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+--|.++...|.+++++.++-..++.||+++-+++.+-|.+.--+|++||-++..+.. ..+ ..+.+++.+
T Consensus 63 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~~---------~~G-~~~~~~l~~ 132 (141)
T 3hxs_A 63 CGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQV---------NMG-ALSKEQLKG 132 (141)
T ss_dssp CTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCEE---------EES-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEEE---------EeC-CCCHHHHHH
Confidence 4469999999999999988778889999999999999999977667655534433321 122 235678887
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.|+.+
T Consensus 133 ~l~~~ 137 (141)
T 3hxs_A 133 YIDKV 137 (141)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77754
No 28
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.14 E-value=0.034 Score=34.85 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=53.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.+.-..++.||+++-+++.+-|.+.--+|+++|-+++-+. ++.+. .+++++.+
T Consensus 35 C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~-~~~~~l~~ 104 (112)
T 1t00_A 35 CGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAK---------TIVGA-KPKAAIVR 104 (112)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEESC-CCHHHHHH
T ss_pred CHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEEEE---------EEeCC-CCHHHHHH
Confidence 457999999999999988655788999999999999999997766765553333221 22222 34677777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 105 ~l~~~ 109 (112)
T 1t00_A 105 DLEDF 109 (112)
T ss_dssp HTHHH
T ss_pred HHHHH
Confidence 77654
No 29
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.13 E-value=0.037 Score=36.99 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=56.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.+|...|.+++++.+.=..++.||+++-+++.+-|.+..-+|++|| ++-.+. +--+| ..+.++|.+
T Consensus 67 C~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~~~~G--------~~~~~~l~~ 136 (148)
T 3p2a_A 67 CGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLY-RNGKMI-DMLNG--------AVPKAPFDN 136 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE-EEESS--------CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEE-ECCeEE-EEEeC--------CCCHHHHHH
Confidence 34799999999999999866678889999999999999999776676565 433322 22222 245688888
Q ss_pred HHHHHhh
Q 033474 91 IVETVYR 97 (118)
Q Consensus 91 IiE~iyR 97 (118)
.|+..-.
T Consensus 137 ~l~~~l~ 143 (148)
T 3p2a_A 137 WLDEQLS 143 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8876543
No 30
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.13 E-value=0.038 Score=34.27 Aligned_cols=75 Identities=19% Similarity=0.154 Sum_probs=53.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.+.-..++.+|.++-+++.+-|.+.--+|+++|-+++.+. ++.+ ..+++++.+
T Consensus 31 C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~G-~~~~~~l~~ 100 (107)
T 1dby_A 31 CGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCE---------TIIG-AVPKATIVQ 100 (107)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEEE---------EEES-CCCHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEEE---------EEeC-CCCHHHHHH
Confidence 457999999999999988765778899999999999999987656655553333322 1222 234577777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 101 ~l~~~ 105 (107)
T 1dby_A 101 TVEKY 105 (107)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 31
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.12 E-value=0.024 Score=36.94 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=51.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++-.+. .++.+.. ++++.+
T Consensus 42 C~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~--------~~~~G~~--~~~l~~ 109 (114)
T 2oe3_A 42 CGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLG-KDGQLI--------GKIIGAN--PTALEK 109 (114)
T ss_dssp CHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEE-ETTEEE--------EEEESSC--HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEE-eCCeEE--------EEEeCCC--HHHHHH
Confidence 45799999999999999888 77889999999999999999776666554 543221 1233333 567766
Q ss_pred HHH
Q 033474 91 IVE 93 (118)
Q Consensus 91 IiE 93 (118)
.|+
T Consensus 110 ~l~ 112 (114)
T 2oe3_A 110 GIK 112 (114)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 32
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.04 E-value=0.049 Score=33.94 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=53.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++ ..++.+|+++-+++.+-|.+..-+|++||-+++-+. ++.+ .+.+++.+
T Consensus 38 C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~g--~~~~~l~~ 105 (113)
T 1ti3_A 38 CPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLVD---------KTVG--ADKDGLPT 105 (113)
T ss_dssp CHHHHHHHHHHHHHHHHCSS-EEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEEE---------EEEC--CCTTHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCC-cEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEEE---------EEec--CCHHHHHH
Confidence 45799999999999998765 667889999999999999997766765553333221 2223 14577888
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.++.+-
T Consensus 106 ~l~~~~ 111 (113)
T 1ti3_A 106 LVAKHA 111 (113)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 777653
No 33
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=95.99 E-value=0.043 Score=33.94 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=51.5
Q ss_pred HHHHHhhHHHHHHhHHhhc---cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 11 LILNLEMDEVLSSVAETIK---NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~---nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
.-.|..+...|.+++++.+ .-..++.+|.++-+++.+-|.+.--+|+++|-+++.+. .-.| ..+.++
T Consensus 33 C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~--~~~g--------~~~~~~ 102 (111)
T 3uvt_A 33 CGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVS--EHSG--------GRDLDS 102 (111)
T ss_dssp CHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE--EECS--------CCSHHH
T ss_pred ChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcEEE--eccC--------CcCHHH
Confidence 4579999999999999765 24677899999999999999997655766664444332 1222 134566
Q ss_pred HHHHHH
Q 033474 88 FIDIVE 93 (118)
Q Consensus 88 fIDIiE 93 (118)
+.+.|+
T Consensus 103 l~~~l~ 108 (111)
T 3uvt_A 103 LHRFVL 108 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 34
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=95.98 E-value=0.021 Score=35.02 Aligned_cols=72 Identities=11% Similarity=0.155 Sum_probs=52.3
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|..+...|.+++++.++ ..++.+|+++-|++.+.|.+...+|+++|-+++.+. ++.+ . +.+++.+
T Consensus 31 C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~G-~-~~~~l~~ 98 (104)
T 2vim_A 31 CGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVD---------RFSG-A-NETKLRE 98 (104)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEES-S-CHHHHHH
T ss_pred CHHHHHhhHHHHHHHHHCCC-CEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEE---------EEeC-C-CHHHHHH
Confidence 45799999999999998775 567889999999999999997766766654344332 2233 1 4567777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 99 ~l~~ 102 (104)
T 2vim_A 99 TITR 102 (104)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
No 35
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=95.91 E-value=0.098 Score=34.73 Aligned_cols=75 Identities=12% Similarity=0.187 Sum_probs=54.3
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.+.-..++.||+++-+++.+-|.+.--+|+++| ++.-+. . ++.+ ..+.+++.+
T Consensus 52 C~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G-~~~~~~l~~ 121 (128)
T 2o8v_B 52 CGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVA-A-------TKVG-ALSKGQLKE 121 (128)
T ss_dssp CHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE-ETTEEE-E-------EEES-CCCHHHHHH
T ss_pred CHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE-eCCEEE-E-------EEcC-CCCHHHHHH
Confidence 45799999999999999875578899999999999999999765666555 543321 1 1222 235678888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 122 ~l~~~ 126 (128)
T 2o8v_B 122 FLDAN 126 (128)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 36
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=95.88 E-value=0.023 Score=35.60 Aligned_cols=50 Identities=20% Similarity=0.220 Sum_probs=41.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEe
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFF 61 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFf 61 (118)
.-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|++||-
T Consensus 33 C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 1gh2_A 33 CGPCLRIAPAFSSMSNKYPQ-AVFLEVDVHQCQGTAATNNISATPTFQFFR 82 (107)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEEE
T ss_pred ChhhHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHhcCCCcccEEEEEE
Confidence 45799999999999998866 567889999999999999997766776663
No 37
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=95.82 E-value=0.067 Score=34.56 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=53.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++| ++..+. . ++.+ ..+.+++.+
T Consensus 43 C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G-~~~~~~l~~ 112 (119)
T 1w4v_A 43 CGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAM-KNGDVV-D-------KFVG-IKDEDQLEA 112 (119)
T ss_dssp CHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEE-eCCcEE-E-------EEcC-CCCHHHHHH
Confidence 45799999999999998865577889999999999999998775676555 543332 1 1222 225677887
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++.+
T Consensus 113 ~l~~~ 117 (119)
T 1w4v_A 113 FLKKL 117 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 38
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.75 E-value=0.03 Score=36.69 Aligned_cols=54 Identities=6% Similarity=0.069 Sum_probs=45.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|.++...|.+++++.+.-..++.||+++-++..+-|.+.--+|+++|-+++
T Consensus 54 C~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 107 (128)
T 3ul3_B 54 CQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKT 107 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCE
Confidence 457999999999999998877888999999999999999997766766663343
No 39
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.74 E-value=0.05 Score=35.71 Aligned_cols=76 Identities=18% Similarity=0.348 Sum_probs=55.2
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|+++| ++..+. + ++.+. +.+++.+
T Consensus 58 C~~C~~~~~~l~~l~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G~--~~~~l~~ 125 (139)
T 3d22_A 58 CGPSRQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTFFFL-RDGQQV-D-------KLVGA--NKPELHK 125 (139)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCEESEEEEE-ETTEEE-E-------EEESC--CHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCC-CEEEEEeCcccHHHHHHcCCCcccEEEEE-cCCeEE-E-------EEeCC--CHHHHHH
Confidence 45799999999999998766 46788999999999999998665565555 543332 1 23333 4688888
Q ss_pred HHHHHhhc
Q 033474 91 IVETVYRG 98 (118)
Q Consensus 91 IiE~iyRg 98 (118)
.|+.+-.+
T Consensus 126 ~l~~~~~~ 133 (139)
T 3d22_A 126 KITAILDS 133 (139)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 88876654
No 40
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.61 E-value=0.066 Score=34.93 Aligned_cols=78 Identities=13% Similarity=0.224 Sum_probs=57.1
Q ss_pred HHHHHhhHHHHHHhHHhhccc---eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 11 LILNLEMDEVLSSVAETIKNF---AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nf---A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
+-.|.++...|.+++++.++- ..++.||+++-+++.+-|.+.--+|+++| ++..+ ..+ .| ..+.++
T Consensus 46 C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~~-~g--------~~~~~~ 114 (140)
T 2dj1_A 46 CGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKIL-KKGQA-VDY-DG--------SRTQEE 114 (140)
T ss_dssp CHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEE-ETTEE-EEC-CS--------CCCHHH
T ss_pred CHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEE-ECCcE-EEc-CC--------CCCHHH
Confidence 457999999999999988875 77889999999999999998766676666 44322 111 12 235688
Q ss_pred HHHHHHHHhhcc
Q 033474 88 FIDIVETVYRGA 99 (118)
Q Consensus 88 fIDIiE~iyRgA 99 (118)
|.+.++..-..+
T Consensus 115 l~~~l~~~~~~~ 126 (140)
T 2dj1_A 115 IVAKVREVSQPD 126 (140)
T ss_dssp HHHHHHHHHSSS
T ss_pred HHHHHHHhcCCC
Confidence 888888765544
No 41
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.55 E-value=0.11 Score=33.36 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=56.5
Q ss_pred HHHHHhhHHHHHHhHHhhc----cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChh
Q 033474 11 LILNLEMDEVLSSVAETIK----NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 86 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~----nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQ 86 (118)
+-.|.++...|.+++++.+ .-..++.||+++-+++.+-|.+.--+|+++|-+++. +.--.| ..+.+
T Consensus 37 C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~--~~~~~G--------~~~~~ 106 (133)
T 1x5d_A 37 CGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGES--PVDYDG--------GRTRS 106 (133)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEE--EEEECS--------CCSHH
T ss_pred CHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCc--eEEecC--------CCCHH
Confidence 4579999999999999987 557889999999999999999876667655544442 222222 23568
Q ss_pred hHHHHHHHHhhc
Q 033474 87 EFIDIVETVYRG 98 (118)
Q Consensus 87 efIDIiE~iyRg 98 (118)
++.+.++.....
T Consensus 107 ~l~~~l~~~~~~ 118 (133)
T 1x5d_A 107 DIVSRALDLFSD 118 (133)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc
Confidence 888888776544
No 42
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.39 E-value=0.082 Score=34.09 Aligned_cols=83 Identities=17% Similarity=0.108 Sum_probs=58.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEe--CCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVD--ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvD--i~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
+--|.++...|.+++++.+.=..++.|| +++-+++.+.|.+.--+|+++|-++..+. .++.+ ..++++|
T Consensus 38 C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~--------~~~~G-~~~~~~l 108 (126)
T 2l57_A 38 CPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKF--------YVHQG-LMRKNNI 108 (126)
T ss_dssp CHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEE--------EEEES-CCCHHHH
T ss_pred CccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEE--------EEecC-CCCHHHH
Confidence 4569999999999999885556778899 99989999999986655654442121111 11222 3467899
Q ss_pred HHHHHHHhhccccC
Q 033474 89 IDIVETVYRGARKG 102 (118)
Q Consensus 89 IDIiE~iyRgA~kG 102 (118)
.+.++........|
T Consensus 109 ~~~l~~~~~~~~~~ 122 (126)
T 2l57_A 109 ETILNSLGVKEGHH 122 (126)
T ss_dssp HHHHHHHCCCCCCC
T ss_pred HHHHHHHhcccccc
Confidence 99999887666544
No 43
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=95.38 E-value=0.11 Score=35.88 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=55.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.--|.++...|.+++++.+.=..++.||+++-|++.+-|.+..-+|+++| ++-.+. + ++.+. .+++++.+
T Consensus 76 C~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~-~~G~~~-~-------~~~G~-~~~~~l~~ 145 (155)
T 2ppt_A 76 CGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILF-HKGREL-A-------RAAGA-RPASELVG 145 (155)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEESC-CCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEE-eCCeEE-E-------EecCC-CCHHHHHH
Confidence 45799999999999999875578899999999999999999776676665 543331 1 12222 35678888
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 146 ~l~~~ 150 (155)
T 2ppt_A 146 FVRGK 150 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 44
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.31 E-value=0.045 Score=36.23 Aligned_cols=77 Identities=12% Similarity=0.061 Sum_probs=52.0
Q ss_pred HHHHhhHHHHHHhHHhhcc-ceEEEEEeCCCccccccccccc------CcceEEEEeecceeEEecCCCCCceEEeecCC
Q 033474 12 ILNLEMDEVLSSVAETIKN-FAVIYLVDISEVPDFNTMYELY------DPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 84 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~n-fA~IYlvDi~eVpdfn~myeL~------dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~ 84 (118)
-.|.++...|.+++++.+. -..++.||+++-|++.+-|.+. --+|++||-+++-+.-=.|.-+...+.=.+..
T Consensus 39 ~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 39 NDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp STTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 4699999999999998873 4677899999999999999986 55576666444443322333333344444555
Q ss_pred hhhH
Q 033474 85 KQEF 88 (118)
Q Consensus 85 kQef 88 (118)
+..+
T Consensus 119 ~~~~ 122 (137)
T 2dj0_A 119 EENV 122 (137)
T ss_dssp HHHH
T ss_pred ccch
Confidence 4443
No 45
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.30 E-value=0.068 Score=34.81 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=55.0
Q ss_pred HHHHHhhHHHHH--HhHHhhccceEEEEEeC---CCcccccccccc---cCcceEEEE-eecceeEEecCCCCCceEEee
Q 033474 11 LILNLEMDEVLS--SVAETIKNFAVIYLVDI---SEVPDFNTMYEL---YDPSTVMFF-FRNKHIMIDLGTGNNNKINWA 81 (118)
Q Consensus 11 ~~~Cm~mDevL~--~~ae~v~nfA~IYlvDi---~eVpdfn~myeL---~dP~tvMFF-frnkHm~vD~GTgnnnKin~~ 81 (118)
+--|.++...|. +++++.++-..++.||+ ++-+++.+-|.+ .--+|++|| =+++-+.--.|..-.+. .
T Consensus 41 C~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~---~ 117 (133)
T 3fk8_A 41 CTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANA---R 117 (133)
T ss_dssp CHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTG---G
T ss_pred CHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCccccc---c
Confidence 346999999999 99998866677889999 899999999998 665665444 23443333333211111 2
Q ss_pred cCChhhHHHHHHHH
Q 033474 82 LKDKQEFIDIVETV 95 (118)
Q Consensus 82 ~~~kQefIDIiE~i 95 (118)
..+.+++.+.++.+
T Consensus 118 ~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 118 KMSDQGIYDFFAKI 131 (133)
T ss_dssp GSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHh
Confidence 44667777777654
No 46
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=95.26 E-value=0.061 Score=34.00 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=43.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|.++...|.+++++.++=..++.||+++-+++.+-|.+.--+|+++|-+++
T Consensus 42 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~ 95 (121)
T 2i1u_A 42 CGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQ 95 (121)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCE
Confidence 457999999999999988755778999999999999999987656765553333
No 47
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.25 E-value=0.021 Score=36.94 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=54.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++...++.||+++-+++.+-|.+.--+|++||-+++.+.. ++.+ ..+.+++++
T Consensus 47 C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~--------~~~G-~~~~~~l~~ 117 (130)
T 2dml_A 47 CGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPE--------DYQG-GRTGEAIVD 117 (130)
T ss_dssp CSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCE--------ECCS-CCSHHHHHH
T ss_pred CHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEE--------Eeec-CCCHHHHHH
Confidence 3469999999999999998878889999999999999999977667655543332111 2222 235577777
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.++..-
T Consensus 118 ~l~~~l 123 (130)
T 2dml_A 118 AALSAL 123 (130)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 48
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=95.23 E-value=0.023 Score=41.21 Aligned_cols=81 Identities=9% Similarity=0.067 Sum_probs=64.4
Q ss_pred cCchhHHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCCh
Q 033474 6 DTPRRLILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDK 85 (118)
Q Consensus 6 ~~~~~~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~k 85 (118)
-+|-|.-.|..|.=+|.++|++...=..|+-||+++-|+.-.-|.+..-+|++||=+++-+. ++.++ .+|
T Consensus 42 A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v~---------~~vG~-~~k 111 (137)
T 2qsi_A 42 GDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTLG---------VIAKI-QDW 111 (137)
T ss_dssp CCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEEE---------EEESC-CCH
T ss_pred CCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEE---------EEeCC-CCH
Confidence 34667788999999999999998777889999999999999999998888988886665542 44443 456
Q ss_pred hhHHHHHHHHh
Q 033474 86 QEFIDIVETVY 96 (118)
Q Consensus 86 QefIDIiE~iy 96 (118)
+++.+.|+.+-
T Consensus 112 ~~l~~~l~~~l 122 (137)
T 2qsi_A 112 SSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777777544
No 49
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=95.20 E-value=0.066 Score=33.01 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=42.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 60 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFF 60 (118)
.-.|.++...|.+++++.++-..++.+|+++-++..+-|.+.--+|+++|
T Consensus 29 C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 29 CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 45799999999999998876678899999999999999998665666555
No 50
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=95.17 E-value=0.092 Score=34.15 Aligned_cols=76 Identities=9% Similarity=-0.056 Sum_probs=53.1
Q ss_pred HHHHHhhHHHHHHhHHhhc-----cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCCh
Q 033474 11 LILNLEMDEVLSSVAETIK-----NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDK 85 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~-----nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~k 85 (118)
+-.|.+|...+.++|++.+ .-..++.||.++-+++.+-|.+.--+|+++|-+++.+.. .+..+ ..+.
T Consensus 45 C~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~-------~~~~G-~~~~ 116 (127)
T 3h79_A 45 SRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEP-------FEYSG-QRYL 116 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSC-------EECCS-CCCH
T ss_pred cHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCc-------eEecC-CccH
Confidence 4579999999999998764 347888999999999999999988778766654433210 11222 2456
Q ss_pred hhHHHHHHH
Q 033474 86 QEFIDIVET 94 (118)
Q Consensus 86 QefIDIiE~ 94 (118)
+++.+.|+.
T Consensus 117 ~~l~~~i~~ 125 (127)
T 3h79_A 117 SLVDSFVFQ 125 (127)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777666653
No 51
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.07 E-value=0.28 Score=35.43 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=58.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.+|...|.+++++.++-..++.||+++-++..+-|.+.--+|+++| ++..+.- ++.+ ..+.+++.+
T Consensus 42 C~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G-~~~~~~l~~ 111 (222)
T 3dxb_A 42 CGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVAA--------TKVG-ALSKGQLKE 111 (222)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEE-ETTEEEE--------EEES-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEE-ECCeEEE--------Eecc-ccChHHHHH
Confidence 45799999999999999887678899999999999999999776675555 4322211 2222 246789999
Q ss_pred HHHHHhhcc
Q 033474 91 IVETVYRGA 99 (118)
Q Consensus 91 IiE~iyRgA 99 (118)
.++.+-.+.
T Consensus 112 ~l~~~l~~~ 120 (222)
T 3dxb_A 112 FLDANLAGS 120 (222)
T ss_dssp HHHHHSCCS
T ss_pred HHHhhcccc
Confidence 998876554
No 52
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.02 E-value=0.16 Score=32.74 Aligned_cols=82 Identities=15% Similarity=0.102 Sum_probs=55.9
Q ss_pred HHHHHhhHHHHHHhHHhhc--cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETIK--NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~--nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
+-.|.++...|.+++++.+ .-..++.||.++-+...+-|.+.--+|++||-+++.+ ..-++.+...+.++|
T Consensus 37 C~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~-------~~~~~~gg~~~~~~l 109 (133)
T 2dj3_A 37 CGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKK-------NPIKFEGGNRDLEHL 109 (133)
T ss_dssp CSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTT-------SCEECCSSCCSTTHH
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCcc-------cceEecCCCcCHHHH
Confidence 4479999999999999987 3467788999999988888888776676554322211 111122123467888
Q ss_pred HHHHHHHhhcc
Q 033474 89 IDIVETVYRGA 99 (118)
Q Consensus 89 IDIiE~iyRgA 99 (118)
...|+..-...
T Consensus 110 ~~~l~~~~~~~ 120 (133)
T 2dj3_A 110 SKFIDEHATKR 120 (133)
T ss_dssp HHHHHHHSSSC
T ss_pred HHHHHHhcccc
Confidence 88888765443
No 53
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.97 E-value=0.18 Score=32.47 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=52.4
Q ss_pred HHHHHhhHHHHHHhHHhhcc-ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHH
Q 033474 11 LILNLEMDEVLSSVAETIKN-FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFI 89 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n-fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefI 89 (118)
+-.|.++...|.+++++.+. =..++.||+++-+++.+-|.+.--+|++|| ++..+ .--.| ..+.++|.
T Consensus 34 C~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~--~~~~G--------~~~~~~l~ 102 (126)
T 1x5e_A 34 CPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHC-KDGEF--RRYQG--------PRTKKDFI 102 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEE--EECCS--------CCCHHHHH
T ss_pred CHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEE-eCCeE--EEeec--------CCCHHHHH
Confidence 45799999999999998874 356788999999999999999776676666 55433 22223 23457777
Q ss_pred HHHHH
Q 033474 90 DIVET 94 (118)
Q Consensus 90 DIiE~ 94 (118)
+.++.
T Consensus 103 ~~l~~ 107 (126)
T 1x5e_A 103 NFISD 107 (126)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77664
No 54
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=94.86 E-value=0.08 Score=33.17 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=54.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
.-.|.++...|.+++++.++ ..++.+|+++-+++.+-|.+..-+|++|| ++..+. + ++.+ .+.+++.+
T Consensus 40 C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~~-~-------~~~g--~~~~~l~~ 107 (118)
T 2vm1_A 40 CGPCRVIAPVFAEYAKKFPG-AIFLKVDVDELKDVAEAYNVEAMPTFLFI-KDGEKV-D-------SVVG--GRKDDIHT 107 (118)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSBSEEEEE-ETTEEE-E-------EEES--CCHHHHHH
T ss_pred CHhHHHHhHHHHHHHHHCCC-cEEEEEEcccCHHHHHHcCCCcCcEEEEE-eCCeEE-E-------EecC--CCHHHHHH
Confidence 45799999999999998775 45688999999999999999776676555 543221 1 1222 14678888
Q ss_pred HHHHHhhcc
Q 033474 91 IVETVYRGA 99 (118)
Q Consensus 91 IiE~iyRgA 99 (118)
.|+.+-..+
T Consensus 108 ~l~~~~~~~ 116 (118)
T 2vm1_A 108 KIVALMGSA 116 (118)
T ss_dssp HHHHHHC--
T ss_pred HHHHHhccc
Confidence 887765443
No 55
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=94.82 E-value=0.12 Score=36.78 Aligned_cols=76 Identities=11% Similarity=0.083 Sum_probs=56.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...+.+++++.+.-..++.||+++-+++.+-|.+.--+|+++| ++..+ +.--+| ..+.+++.+
T Consensus 126 C~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~-~~~~~G--------~~~~~~l~~ 195 (210)
T 3apq_A 126 CSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSGMA-AVKYNG--------DRSKESLVA 195 (210)
T ss_dssp CHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEE-CTTSC-CEECCS--------CCCHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEE-ECCCc-eeEecC--------CCCHHHHHH
Confidence 45799999999999999987788899999999999999999765676565 54332 222222 235678888
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.|+..-
T Consensus 196 ~i~~~l 201 (210)
T 3apq_A 196 FAMQHV 201 (210)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 877654
No 56
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=94.73 E-value=0.041 Score=34.25 Aligned_cols=77 Identities=14% Similarity=0.119 Sum_probs=52.1
Q ss_pred HHHHHhhHHHHHHhHHhhcc---ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 11 LILNLEMDEVLSSVAETIKN---FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n---fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
+-.|.++...|.+++++.+. -..++.+|.++-+++.+.|.+.--+|++||-+++-+.-.--+| ..+.++
T Consensus 36 C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g--------~~~~~~ 107 (120)
T 1mek_A 36 CGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTA--------GREADD 107 (120)
T ss_dssp CSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSCSSSCEECCC--------CSSHHH
T ss_pred CHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCCcCCcccccC--------ccCHHH
Confidence 34699999999999998763 2566789999999999999997766766663333210011112 335677
Q ss_pred HHHHHHHH
Q 033474 88 FIDIVETV 95 (118)
Q Consensus 88 fIDIiE~i 95 (118)
+...++..
T Consensus 108 l~~~l~~~ 115 (120)
T 1mek_A 108 IVNWLKKR 115 (120)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 77777643
No 57
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=94.73 E-value=0.17 Score=29.98 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=50.4
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHHH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIV 92 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDIi 92 (118)
.|.++...|.+++++.+.-..++.+|+++-++..+-|.+..-+|+++ +++. ++.+. .+.+++.+.+
T Consensus 15 ~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----------~~~G~-~~~~~l~~~l 80 (85)
T 1nho_A 15 YCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-----------RFVGA-PSREELFEAI 80 (85)
T ss_dssp CSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-----------EEECS-SCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-----------EEccC-CCHHHHHHHH
Confidence 58899999999999887556778999999999999999876556433 4332 33332 3567887777
Q ss_pred HHH
Q 033474 93 ETV 95 (118)
Q Consensus 93 E~i 95 (118)
+..
T Consensus 81 ~~~ 83 (85)
T 1nho_A 81 NDE 83 (85)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 58
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.71 E-value=0.034 Score=40.42 Aligned_cols=81 Identities=9% Similarity=0.180 Sum_probs=64.7
Q ss_pred cCchhHHHHHhhHHHHHHhHHhhccc-eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCC
Q 033474 6 DTPRRLILNLEMDEVLSSVAETIKNF-AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 84 (118)
Q Consensus 6 ~~~~~~~~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~ 84 (118)
-+|.|+-.|..|.-+|.++|++...= +.|+-||+++-|+.-.-|.+..-.|++||=+++-+ .++.++ .+
T Consensus 43 a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v---------~~~~G~-~~ 112 (140)
T 2qgv_A 43 SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYR---------GVLNGI-HP 112 (140)
T ss_dssp CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEE---------EEEESC-CC
T ss_pred CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEE---------EEEecC-CC
Confidence 34667888999999999999988766 88999999999999999999887798888666543 244443 56
Q ss_pred hhhHHHHHHHHh
Q 033474 85 KQEFIDIVETVY 96 (118)
Q Consensus 85 kQefIDIiE~iy 96 (118)
|+++.+.|+..-
T Consensus 113 k~~l~~~i~~~l 124 (140)
T 2qgv_A 113 WAELINLMRGLV 124 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 788888887654
No 59
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=94.71 E-value=0.24 Score=32.55 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=52.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|++|| ++..+. + ++.+ . +.+++.+
T Consensus 50 C~~C~~~~~~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G-~-~~~~l~~ 117 (124)
T 1xfl_A 50 CGPCRFIAPFFADLAKKLPN-VLFLKVDTDELKSVASDWAIQAMPTFMFL-KEGKIL-D-------KVVG-A-KKDELQS 117 (124)
T ss_dssp CHHHHHHHHHHHHHHHHCSS-EEEEEEETTTSHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES-C-CHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHHcCCCccCEEEEE-ECCEEE-E-------EEeC-C-CHHHHHH
Confidence 45799999999999998775 56788999999999999998765576555 543322 1 2233 1 5678887
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.|+..
T Consensus 118 ~l~~~ 122 (124)
T 1xfl_A 118 TIAKH 122 (124)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 60
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=94.59 E-value=0.1 Score=33.91 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=40.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 60 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFF 60 (118)
+-.|..+...|.+++++. +-..++.||+++-+++.+-|.+..-+|++||
T Consensus 35 C~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~ 83 (118)
T 2f51_A 35 CGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFFV 83 (118)
T ss_dssp CHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEEE
Confidence 457999999999999988 4467789999999999999999776676555
No 61
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=94.59 E-value=0.15 Score=30.20 Aligned_cols=68 Identities=13% Similarity=0.229 Sum_probs=49.6
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHHH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIV 92 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDIi 92 (118)
.|.++...|.+++++.+.-..++.+|+++-++..+-|.+.--+|+++ +++- ++.+. .+.+++.+.+
T Consensus 16 ~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----------~~~G~-~~~~~l~~~l 81 (85)
T 1fo5_A 16 HCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-----------EFIGA-PTKEALVEAI 81 (85)
T ss_dssp CCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-----------ECCSS-SSSHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-----------eeecC-CCHHHHHHHH
Confidence 58899999999999887557789999999999999999876556433 4432 22332 3567777777
Q ss_pred HH
Q 033474 93 ET 94 (118)
Q Consensus 93 E~ 94 (118)
+.
T Consensus 82 ~~ 83 (85)
T 1fo5_A 82 KK 83 (85)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 62
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=94.51 E-value=0.23 Score=31.75 Aligned_cols=72 Identities=10% Similarity=0.145 Sum_probs=49.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC-CcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS-EVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFI 89 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~-eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefI 89 (118)
+-.|.++...|.+++++.++ ..++.||.+ +-+++.+-|.+.--+|+++| ++..+. + ++.+. +.+++.
T Consensus 49 C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G~--~~~~l~ 116 (124)
T 1faa_A 49 CGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKIL-KENSVV-G-------EVTGA--KYDKLL 116 (124)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSEEEEE-ETTEEE-E-------EEESS--CHHHHH
T ss_pred CHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeEEEEE-eCCcEE-E-------EEcCC--CHHHHH
Confidence 45799999999999998877 567889997 67888888888665575444 443321 1 12222 256777
Q ss_pred HHHHH
Q 033474 90 DIVET 94 (118)
Q Consensus 90 DIiE~ 94 (118)
+.++.
T Consensus 117 ~~i~~ 121 (124)
T 1faa_A 117 EAIQA 121 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 63
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=94.48 E-value=0.22 Score=31.66 Aligned_cols=71 Identities=11% Similarity=0.195 Sum_probs=49.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++. + ..++.||+++-+++.+-|.+.--+|+++| ++..+ ++ ++.+ .+.+++.+
T Consensus 45 C~~C~~~~~~~~~~~~~~-~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~-------~~~G--~~~~~l~~ 111 (117)
T 2xc2_A 45 CGPCKTIAPLFKELSEKY-D-AIFVKVDVDKLEETARKYNISAMPTFIAI-KNGEK-VG-------DVVG--ASIAKVED 111 (117)
T ss_dssp CHHHHHHHHHHHHHHTTS-S-SEEEEEETTTSHHHHHHTTCCSSSEEEEE-ETTEE-EE-------EEES--SCHHHHHH
T ss_pred CHhHHHHhHHHHHHHHHc-C-cEEEEEECCccHHHHHHcCCCccceEEEE-eCCcE-EE-------EEeC--CCHHHHHH
Confidence 457999999999999876 4 56788999999999999998765675555 44322 11 2333 24567777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 112 ~l~~ 115 (117)
T 2xc2_A 112 MIKK 115 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 64
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=94.45 E-value=0.14 Score=32.58 Aligned_cols=74 Identities=14% Similarity=0.222 Sum_probs=52.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++-..++.||+++-+++.+-|.+..-+|+++| ++..+. . ++.+ ..++++|.+
T Consensus 29 C~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G-~~~~~~l~~ 98 (112)
T 2voc_A 29 CGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVL-KDGEVV-E-------TSVG-FKPKEALQE 98 (112)
T ss_dssp BGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEE-ETTEEE-E-------EEES-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCEEE-E-------EEeC-CCCHHHHHH
Confidence 45699999999999999875578899999999999999999765666555 543321 1 1222 234577777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 99 ~l~~ 102 (112)
T 2voc_A 99 LVNK 102 (112)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6653
No 65
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=94.44 E-value=0.12 Score=32.41 Aligned_cols=74 Identities=15% Similarity=0.306 Sum_probs=50.2
Q ss_pred HHHHHhhHHHHHHhHHhh--ccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETI--KNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v--~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
+-.|.++...|.+++++. ++ ..++.||+++-+++.+-|.+.--+|++|| ++..+ ++-..| . +.+++
T Consensus 33 C~~C~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~~~~G-------~--~~~~l 100 (112)
T 3d6i_A 33 AEPCKALKQVFEAISNEPSNSN-VSFLSIDADENSEISELFEISAVPYFIII-HKGTI-LKELSG-------A--DPKEY 100 (112)
T ss_dssp --CHHHHHHHHHHHHHCGGGTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEE-EEEECS-------C--CHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCC-EEEEEEecccCHHHHHHcCCCcccEEEEE-ECCEE-EEEecC-------C--CHHHH
Confidence 346999999999999984 34 67889999999999999999776676555 44332 222222 2 23457
Q ss_pred HHHHHHHh
Q 033474 89 IDIVETVY 96 (118)
Q Consensus 89 IDIiE~iy 96 (118)
.+.++..-
T Consensus 101 ~~~l~~~~ 108 (112)
T 3d6i_A 101 VSLLEDCK 108 (112)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 66
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=94.21 E-value=0.1 Score=35.59 Aligned_cols=53 Identities=11% Similarity=0.082 Sum_probs=40.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIM 67 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~ 67 (118)
.-.|..|+.+|.++|++-.+ ..++-||+++.+ +-|++..-+|+++|-+++-+.
T Consensus 35 c~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~~---~~~~v~~~PT~~~fk~G~~v~ 87 (118)
T 3evi_A 35 IPMCLLVNQHLSLLARKFPE-TKFVKAIVNSCI---QHYHDNCLPTIFVYKNGQIEA 87 (118)
T ss_dssp SHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGTS---TTCCGGGCSEEEEEETTEEEE
T ss_pred ChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHhH---HHCCCCCCCEEEEEECCEEEE
Confidence 34699999999999998766 567899999863 667776667877776666543
No 67
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=94.01 E-value=0.16 Score=33.94 Aligned_cols=75 Identities=12% Similarity=0.221 Sum_probs=51.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEe--ecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFF--RNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFf--rnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
+-.|.+|...|.+++++. + ..++.||+++-+++.+-|.+.--+|++||. +++-..++ ++.+. +.++|
T Consensus 52 C~~C~~~~p~l~~l~~~~-~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~-------~~~G~--~~~~l 120 (133)
T 3cxg_A 52 CKPCNKIKEYFKNQLNYY-Y-VTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVH-------TVEGA--NQNDI 120 (133)
T ss_dssp CHHHHHTHHHHHGGGGTE-E-CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEE-------EEESC--CHHHH
T ss_pred CHHHHHHHHHHHHHHHhc-C-EEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEE-------EEcCC--CHHHH
Confidence 457999999999998865 2 567889999999999989986656655553 33311222 23333 57888
Q ss_pred HHHHHHHh
Q 033474 89 IDIVETVY 96 (118)
Q Consensus 89 IDIiE~iy 96 (118)
.+.|+..-
T Consensus 121 ~~~l~~~l 128 (133)
T 3cxg_A 121 EKAFQKYC 128 (133)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 88887764
No 68
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=93.85 E-value=0.093 Score=39.18 Aligned_cols=55 Identities=18% Similarity=0.369 Sum_probs=47.9
Q ss_pred hhHHHHHhhHHHHHHhHHhhc-----cceEEEEEeCCCcccccccccccCcceEEEEeec
Q 033474 9 RRLILNLEMDEVLSSVAETIK-----NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRN 63 (118)
Q Consensus 9 ~~~~~Cm~mDevL~~~ae~v~-----nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrn 63 (118)
..+--|..|.-++.++|++.+ .=..++-||+++-|+.-+.|.+..-+|+++|=.+
T Consensus 54 ~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 54 MSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCC
T ss_pred CCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCC
Confidence 367889999999999999886 4578899999999999999999998898777544
No 69
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=93.78 E-value=0.38 Score=31.71 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=54.2
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++-..++.||+++-+++.+-|.+.--+|++||=++..+. +..+ ..+.+++.+
T Consensus 50 C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~---------~~~G-~~~~~~l~~ 119 (136)
T 2l5l_A 50 CGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE---------MAQG-AMPKASFKK 119 (136)
T ss_dssp SHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE---------EEES-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE---------EEeC-CCCHHHHHH
Confidence 457999999999999998766788999999999999999997766654441322111 1222 235678888
Q ss_pred HHHHHh
Q 033474 91 IVETVY 96 (118)
Q Consensus 91 IiE~iy 96 (118)
.|+..-
T Consensus 120 ~l~~~~ 125 (136)
T 2l5l_A 120 AIDEFL 125 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877653
No 70
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=93.73 E-value=0.17 Score=35.68 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=54.1
Q ss_pred HHHHhhHHHHHHhHHhhccc---eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 12 ILNLEMDEVLSSVAETIKNF---AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nf---A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
-.|..+...+.++|++++.- ..++.||.++-+++.+-|.+..-+|++||-+++.+. + .|. .+.+++
T Consensus 160 ~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~--~-~g~--------~~~~~l 228 (241)
T 3idv_A 160 GHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYD--Y-NGP--------REKYGI 228 (241)
T ss_dssp TGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE--C-CSC--------CSHHHH
T ss_pred HHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEE--e-cCC--------CCHHHH
Confidence 46999999999999988653 677889999999999999997766877765555432 2 232 356777
Q ss_pred HHHHHHH
Q 033474 89 IDIVETV 95 (118)
Q Consensus 89 IDIiE~i 95 (118)
++.++..
T Consensus 229 ~~~l~~~ 235 (241)
T 3idv_A 229 VDYMIEQ 235 (241)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7777654
No 71
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=93.61 E-value=0.12 Score=36.23 Aligned_cols=82 Identities=9% Similarity=0.070 Sum_probs=57.4
Q ss_pred HHHHHhhHHHHHHhHHhhc--cceEEEEEeCCCc--ccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChh
Q 033474 11 LILNLEMDEVLSSVAETIK--NFAVIYLVDISEV--PDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 86 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~--nfA~IYlvDi~eV--pdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQ 86 (118)
+.-|-+|++.++...++.. +.+.+..||+++- ++....|.+.-++|++||=+++-+- ++.+.+. ++
T Consensus 30 C~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~---------Ri~G~~~-~~ 99 (116)
T 3dml_A 30 CLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG---------RLEGYPG-ED 99 (116)
T ss_dssp CHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE---------EEECCCC-HH
T ss_pred CHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe---------eecCCCC-HH
Confidence 5679999986665544221 1256788999874 5888999999999988876555443 6776555 58
Q ss_pred hHHHHHHHHhhccccC
Q 033474 87 EFIDIVETVYRGARKG 102 (118)
Q Consensus 87 efIDIiE~iyRgA~kG 102 (118)
+|...++.+-.++..|
T Consensus 100 ~f~~~L~~~l~~~~~~ 115 (116)
T 3dml_A 100 FFWPMLARLIGQAEPG 115 (116)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhcCCC
Confidence 9999999887666544
No 72
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.39 E-value=0.41 Score=31.93 Aligned_cols=78 Identities=10% Similarity=0.059 Sum_probs=54.4
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccC--cceEEEEeecceeEEecCCCCCceEE--eecCChhhH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYD--PSTVMFFFRNKHIMIDLGTGNNNKIN--WALKDKQEF 88 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~d--P~tvMFFfrnkHm~vD~GTgnnnKin--~~~~~kQef 88 (118)
.|-.+-.+|.++|++.+.=..++.||+++-|+.-+.|.+.. -+|+++| ++. .|...++. ++ -+++++
T Consensus 36 ~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~-~~~-------~g~~~~~~~~g~-~~~~~l 106 (133)
T 2djk_A 36 ERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ-EVA-------KNQKFPFDQEKE-ITFEAI 106 (133)
T ss_dssp SHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE-CTT-------TCCBCCCCSSSC-CCHHHH
T ss_pred hHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE-ecC-------cCcccCCCCccc-cCHHHH
Confidence 48889999999999887657889999999999999999965 5676554 431 12222222 22 245677
Q ss_pred HHHHHHHhhcc
Q 033474 89 IDIVETVYRGA 99 (118)
Q Consensus 89 IDIiE~iyRgA 99 (118)
.+.|+.+-.|.
T Consensus 107 ~~fi~~~l~Gk 117 (133)
T 2djk_A 107 KAFVDDFVAGK 117 (133)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 77777766553
No 73
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=93.23 E-value=0.22 Score=33.73 Aligned_cols=78 Identities=19% Similarity=0.320 Sum_probs=55.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|++||-+++-+. ++.+. +.+++.+
T Consensus 44 C~~C~~~~p~l~~l~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~--~~~~l~~ 111 (153)
T 2wz9_A 44 APQCAQMNEVMAELAKELPQ-VSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKID---------RLDGA--HAPELTK 111 (153)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEE---------EEESS--CHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHcCC-eEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEE---------EEeCC--CHHHHHH
Confidence 45799999999999998766 566889999999999999997766755554333322 22331 4567888
Q ss_pred HHHHHhhccc
Q 033474 91 IVETVYRGAR 100 (118)
Q Consensus 91 IiE~iyRgA~ 100 (118)
.|+..-..+.
T Consensus 112 ~i~~~l~~~~ 121 (153)
T 2wz9_A 112 KVQRHASSGS 121 (153)
T ss_dssp HHHHHSCTTS
T ss_pred HHHHHhcccc
Confidence 8887765543
No 74
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=93.13 E-value=0.15 Score=33.89 Aligned_cols=79 Identities=11% Similarity=0.032 Sum_probs=52.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeC---------CCcccccccccccCcceEEEEeecceeEEecCCCCCceEEee
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDI---------SEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA 81 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi---------~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~ 81 (118)
+--|.++...|.+++++.+ ..++.||+ ++-++..+-|.+.--+|++||-+++-+ + ++.+
T Consensus 43 C~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v--~-------~~~G- 110 (135)
T 3emx_A 43 CPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIV--D-------KLVG- 110 (135)
T ss_dssp CHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEE--E-------EEES-
T ss_pred CHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEE--E-------EEeC-
Confidence 4579999999999999876 67788999 788888888888654476555433221 1 2223
Q ss_pred cCChhhHHHHHHHHhhcccc
Q 033474 82 LKDKQEFIDIVETVYRGARK 101 (118)
Q Consensus 82 ~~~kQefIDIiE~iyRgA~k 101 (118)
..+++.+..+++....+..+
T Consensus 111 ~~~~~~~~~~i~~~~~~~~~ 130 (135)
T 3emx_A 111 ATPWSLKVEKAREIYGGEGH 130 (135)
T ss_dssp CCCHHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHHHHHhCCCcc
Confidence 34567888888887766544
No 75
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=92.99 E-value=0.23 Score=31.09 Aligned_cols=73 Identities=10% Similarity=0.156 Sum_probs=50.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC-CcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS-EVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFI 89 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~-eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefI 89 (118)
+-.|.++...|.+++++.++ ..++.||++ +-+++.+-|.+.--+|+++ |++..+. + ++.+. +.+++.
T Consensus 36 C~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~-~~~G~~~-~-------~~~G~--~~~~l~ 103 (111)
T 2pu9_C 36 CGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKI-LKENSVV-G-------EVTGA--KYDKLL 103 (111)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSEEEE-ESSSSEE-E-------EEESS--CHHHHH
T ss_pred CHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeEEEE-EeCCcEE-E-------EEcCC--CHHHHH
Confidence 45799999999999998887 567889998 7888888888866556544 4442221 1 22232 256777
Q ss_pred HHHHHH
Q 033474 90 DIVETV 95 (118)
Q Consensus 90 DIiE~i 95 (118)
+.|+.+
T Consensus 104 ~~l~~~ 109 (111)
T 2pu9_C 104 EAIQAA 109 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777653
No 76
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=92.73 E-value=0.05 Score=34.83 Aligned_cols=76 Identities=17% Similarity=0.200 Sum_probs=53.2
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHH
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI 91 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDI 91 (118)
-.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|+++|-+++.+ . ++.+ .+.+++.+.
T Consensus 49 ~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--~-------~~~g--~~~~~l~~~ 116 (130)
T 1wmj_A 49 GPCRFIAPVFAEYAKKFPG-AVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEA--D-------KVVG--ARKDDLQNT 116 (130)
T ss_dssp SCSSSSHHHHHHHHHHCTT-BCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCC--B-------CCCT--TCTTTHHHH
T ss_pred hhHHHHHHHHHHHHHHCCC-CEEEEEeccchHHHHHHcCCCccceEEEEeCCeEE--E-------EEeC--CCHHHHHHH
Confidence 4599999999999998775 56688999999999999998665565555223322 1 2222 146788888
Q ss_pred HHHHhhcc
Q 033474 92 VETVYRGA 99 (118)
Q Consensus 92 iE~iyRgA 99 (118)
++..-..+
T Consensus 117 l~~~~~~~ 124 (130)
T 1wmj_A 117 IVKHVGAT 124 (130)
T ss_dssp HHHHTSSS
T ss_pred HHHHHhcc
Confidence 88766544
No 77
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=92.67 E-value=0.23 Score=36.46 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=44.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|..+...+.+++++.+.-..++.||+++-|++.+-|.+...+|++||-.++
T Consensus 38 C~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 91 (287)
T 3qou_A 38 SQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQ 91 (287)
T ss_dssp CTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTE
T ss_pred ChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCE
Confidence 346999999999999998876778899999999999999997766876664443
No 78
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=92.29 E-value=0.23 Score=31.64 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=51.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|..+...|.+++++.++ ..++.+|+++-+++.+-|.+.--+|++||-+++.+. ++.+. .++++|..
T Consensus 31 C~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~---------~~~G~-~~~~~l~~ 99 (110)
T 2l6c_A 31 CPHCKNMEKVLDKFGARAPQ-VAISSVDSEARPELMKELGFERVPTLVFIRDGKVAK---------VFSGI-MNPRELQA 99 (110)
T ss_dssp CSTHHHHHHHHHHHHTTCTT-SCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEEE---------EEESC-CCHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHCCC-cEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEEE---------EEcCC-CCHHHHHH
Confidence 34699999999999987665 466889999999999999987766766663333321 23332 35677777
Q ss_pred HHHHH
Q 033474 91 IVETV 95 (118)
Q Consensus 91 IiE~i 95 (118)
.++..
T Consensus 100 ~~~~~ 104 (110)
T 2l6c_A 100 LYASI 104 (110)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 76643
No 79
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=92.14 E-value=0.19 Score=33.13 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=45.9
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHHH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIV 92 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDIi 92 (118)
.|.+++..+.+++++.++-..++.||+++-++..+-|.+.--+|++|| ++..+. .++.+. .+++++.+.+
T Consensus 49 ~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~--------~~~~G~-~~~~~l~~~l 118 (123)
T 1oaz_A 49 PCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVA--------ATKVGA-LSKGQLKEFL 118 (123)
T ss_dssp CCCTTHHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEEE-ESSSEE--------EEEESC-CCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE-ECCEEE--------EEEeCC-CCHHHHHHHH
Confidence 699999999999998875577889999999999999999776676666 543321 123332 3457777766
Q ss_pred H
Q 033474 93 E 93 (118)
Q Consensus 93 E 93 (118)
+
T Consensus 119 ~ 119 (123)
T 1oaz_A 119 D 119 (123)
T ss_dssp T
T ss_pred H
Confidence 5
No 80
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=91.70 E-value=0.74 Score=28.94 Aligned_cols=73 Identities=10% Similarity=0.015 Sum_probs=45.5
Q ss_pred HHHHHhhHHHHHHhHHhhcc-----ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCCh
Q 033474 11 LILNLEMDEVLSSVAETIKN-----FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDK 85 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n-----fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~k 85 (118)
+-.|.++...|.+++++.++ -..++.||.++-+ +.+ .+..-+|++||-+++.+.+. ++.+ ..+.
T Consensus 37 C~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~-------~~~G-~~~~ 105 (121)
T 2djj_A 37 CGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPTIKLYPAGAKGQPV-------TYSG-SRTV 105 (121)
T ss_dssp CTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSEEEEECSSCTTSCC-------CCCC-CSCH
T ss_pred CHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCeEEEEeCcCCCCce-------EecC-CCCH
Confidence 34699999999999999875 4667889988755 333 56555565555333221111 2222 2356
Q ss_pred hhHHHHHHH
Q 033474 86 QEFIDIVET 94 (118)
Q Consensus 86 QefIDIiE~ 94 (118)
++|.+.|+.
T Consensus 106 ~~l~~~i~~ 114 (121)
T 2djj_A 106 EDLIKFIAE 114 (121)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777764
No 81
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.48 E-value=0.53 Score=31.45 Aligned_cols=77 Identities=10% Similarity=-0.013 Sum_probs=48.2
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|.+|...|.++|++..+ ..++.||+++.+ +-|.+.-.+|++||-+++-+.-=.|.-. +...=-+.+++..
T Consensus 42 C~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~~~---~~~~~~~~~~l~~ 114 (135)
T 2dbc_A 42 VPMCLVVNQHLSVLARKFPE-TKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGIIE---CGGINLKLEELEW 114 (135)
T ss_dssp CHHHHHHHHHHHHHHHHCSS-EEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEESTTT---TTCTTCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeEEe---eCCCcCCHHHHHH
Confidence 34799999999999998755 567889998876 5677766677666644443322222110 0000015677777
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 115 ~l~~ 118 (135)
T 2dbc_A 115 KLSE 118 (135)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 82
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=91.40 E-value=0.16 Score=35.42 Aligned_cols=79 Identities=8% Similarity=0.182 Sum_probs=52.4
Q ss_pred CchhHHHHHhhHHHHHHhHHhhccceE--EEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCC
Q 033474 7 TPRRLILNLEMDEVLSSVAETIKNFAV--IYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 84 (118)
Q Consensus 7 ~~~~~~~Cm~mDevL~~~ae~v~nfA~--IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~ 84 (118)
+|.+.-.|..|.-+|.+++++..+ .. ++-||+++-|+..+-|.+.--+|++|| ++-.+ ++ ++.+. .+
T Consensus 44 ~~~~C~~C~~l~P~l~~la~~~~~-v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~f-k~G~~-v~-------~~~G~-~~ 112 (142)
T 2es7_A 44 DPRRTPEVSDNPVMIAELLREFPQ-FDWQVAVADLEQSEAIGDRFNVRRFPATLVF-TDGKL-RG-------ALSGI-HP 112 (142)
T ss_dssp CSCC----CCHHHHHHHHHHTCTT-SCCEEEEECHHHHHHHHHTTTCCSSSEEEEE-SCC------------CEESC-CC
T ss_pred CCCCCccHHHHHHHHHHHHHHhcc-cceeEEEEECCCCHHHHHhcCCCcCCeEEEE-eCCEE-EE-------EEeCC-CC
Confidence 345567899999999999998744 45 789999999999999999765566565 55332 22 34443 35
Q ss_pred hhhHHHHHHHHh
Q 033474 85 KQEFIDIVETVY 96 (118)
Q Consensus 85 kQefIDIiE~iy 96 (118)
++++.+.|+...
T Consensus 113 ~~~l~~~i~~~l 124 (142)
T 2es7_A 113 WAELLTLMRSIV 124 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 678888887654
No 83
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=91.01 E-value=1.4 Score=30.85 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=50.8
Q ss_pred HHHhhHHHHHHhHHhhc----cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 13 LNLEMDEVLSSVAETIK----NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~----nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
-|.++...|.+++++.+ .-..++.||+++-++..+-|.+.--+|+++| ++.... . ++.+. .+.++|
T Consensus 148 ~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G~-~~~~~l 217 (226)
T 1a8l_A 148 YCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQ-VNGEDR-V-------EFEGA-YPEKMF 217 (226)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEE-ETTEEE-E-------EEESC-CCHHHH
T ss_pred ccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEE-eCCcee-E-------EEcCC-CCHHHH
Confidence 59999999999999887 3567789999999999888998665565444 443221 1 22222 345677
Q ss_pred HHHHHHH
Q 033474 89 IDIVETV 95 (118)
Q Consensus 89 IDIiE~i 95 (118)
.+.++..
T Consensus 218 ~~~l~~~ 224 (226)
T 1a8l_A 218 LEKLLSA 224 (226)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777654
No 84
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=90.87 E-value=0.31 Score=31.83 Aligned_cols=53 Identities=11% Similarity=0.113 Sum_probs=42.1
Q ss_pred hHHHHHhhHHHHHHhHHhhccceEEEEEeC-------CCcccccccccccCcceEEEEeec
Q 033474 10 RLILNLEMDEVLSSVAETIKNFAVIYLVDI-------SEVPDFNTMYELYDPSTVMFFFRN 63 (118)
Q Consensus 10 ~~~~Cm~mDevL~~~ae~v~nfA~IYlvDi-------~eVpdfn~myeL~dP~tvMFFfrn 63 (118)
.+-.|..+...|.+++++.+.=..++.||+ ++-+++.+-|.+.--+|++| |++
T Consensus 42 wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~-~~~ 101 (123)
T 1wou_A 42 WCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLK-YGT 101 (123)
T ss_dssp SCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEE-TTS
T ss_pred cCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEE-EcC
Confidence 456799999999999998865577788999 78888888899876667544 444
No 85
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=90.69 E-value=0.38 Score=33.86 Aligned_cols=77 Identities=12% Similarity=0.197 Sum_probs=55.2
Q ss_pred HHHHHhhHHHHHHhHHhhccc---eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 11 LILNLEMDEVLSSVAETIKNF---AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nf---A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
+-.|.++...|.+++++.+.- ..++.||.++-+++.+-|.+.--+|+++|-+++.+ ++ .| ..+.++
T Consensus 44 C~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~-~g--------~~~~~~ 112 (241)
T 3idv_A 44 CGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV--DY-EG--------SRTQEE 112 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EC-CS--------CSCHHH
T ss_pred CHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcc--cc-cC--------cccHHH
Confidence 457999999999999988765 67789999999999999999775676666444433 32 22 234566
Q ss_pred HHHHHHHHhhc
Q 033474 88 FIDIVETVYRG 98 (118)
Q Consensus 88 fIDIiE~iyRg 98 (118)
+...++..-..
T Consensus 113 l~~~i~~~~~~ 123 (241)
T 3idv_A 113 IVAKVREVSQP 123 (241)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHhhccCc
Confidence 66666665443
No 86
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=90.51 E-value=0.13 Score=35.90 Aligned_cols=89 Identities=6% Similarity=0.007 Sum_probs=53.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCccc-ccccccc--cCcceEEEE-eecceeEEecCCCCCceEEeecCChh
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPD-FNTMYEL--YDPSTVMFF-FRNKHIMIDLGTGNNNKINWALKDKQ 86 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpd-fn~myeL--~dP~tvMFF-frnkHm~vD~GTgnnnKin~~~~~kQ 86 (118)
+--|..+...|.++++..+.-..++.||+++-++ ..+-|.+ .--+|++|| -+++-+.-=.|.-....+.+...+.+
T Consensus 58 C~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~ 137 (164)
T 1sen_A 58 CGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAE 137 (164)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHH
T ss_pred CHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHH
Confidence 4579999999999776543224456788877766 6777776 324454344 23333322233323333334457889
Q ss_pred hHHHHHHHHhhcc
Q 033474 87 EFIDIVETVYRGA 99 (118)
Q Consensus 87 efIDIiE~iyRgA 99 (118)
+|++.++.+....
T Consensus 138 ~l~~~l~~~l~~~ 150 (164)
T 1sen_A 138 QVVQGMKEAQERL 150 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999998876543
No 87
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=90.18 E-value=2.3 Score=30.05 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=52.5
Q ss_pred HHHHHhhHHHHHHhHHhh--ccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETI--KNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v--~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
.-.|.++=..+.++|.+. +.-..+..||.++-++..+-|.+.--+|++|| ++... .....+ ..+.++|
T Consensus 37 C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~-~~~~~--------~~~~~G-~~~~~~l 106 (229)
T 2ywm_A 37 CQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE-GDKDY--------GIRYIG-LPAGLEF 106 (229)
T ss_dssp GGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE-SSSCC--------CEEEES-CCCTTHH
T ss_pred cHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE-CCCcc--------cceecC-CccHHHH
Confidence 456777777788887666 55677889999999999999999776676555 33211 122333 3456777
Q ss_pred HHHHHHHhh
Q 033474 89 IDIVETVYR 97 (118)
Q Consensus 89 IDIiE~iyR 97 (118)
.+.++....
T Consensus 107 ~~~~~~~~~ 115 (229)
T 2ywm_A 107 TTLINGIFH 115 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777766553
No 88
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=89.40 E-value=0.06 Score=32.65 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=40.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 60 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFF 60 (118)
.-.|.++...|.+++++.++-..++.+|+++-+++.+-|.+.--+|+++|
T Consensus 31 C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 31 CGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 44699999999999998875577788999999999999998665565555
No 89
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=89.82 E-value=1.4 Score=30.84 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=52.4
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCC--cccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISE--VPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~e--Vpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
.-.|.++...|.++|+. +.-..+..||.++ -|+..+-|.+..-+|+++|-.++.. ..+..+ ..+.+++
T Consensus 35 C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--------~~~~~G-~~~~~~l 104 (226)
T 1a8l_A 35 CQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDF--------GVRYFG-LPAGHEF 104 (226)
T ss_dssp CTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCC--------SEEEES-CCCTTHH
T ss_pred CchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCcee--------eEEEec-cCcHHHH
Confidence 34599999999999975 5556778999998 8998888998776676565323321 122333 2355677
Q ss_pred HHHHHHHhh
Q 033474 89 IDIVETVYR 97 (118)
Q Consensus 89 IDIiE~iyR 97 (118)
.+.++....
T Consensus 105 ~~~l~~~l~ 113 (226)
T 1a8l_A 105 AAFLEDIVD 113 (226)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777654
No 90
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=89.76 E-value=0.98 Score=30.65 Aligned_cols=83 Identities=18% Similarity=0.215 Sum_probs=47.0
Q ss_pred HHHHhhHHHH---HHhHHhhccceEEEEEeCCCcccc--------------------------cccccccCcceEEEEee
Q 033474 12 ILNLEMDEVL---SSVAETIKNFAVIYLVDISEVPDF--------------------------NTMYELYDPSTVMFFFR 62 (118)
Q Consensus 12 ~~Cm~mDevL---~~~ae~v~nfA~IYlvDi~eVpdf--------------------------n~myeL~dP~tvMFFfr 62 (118)
--|.+|...+ .++++..++=.+++-||+++-++. .+.|.+.--+|+ +|+.
T Consensus 60 ~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~-~lid 138 (172)
T 3f9u_A 60 VNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFY-VLID 138 (172)
T ss_dssp HHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEE-EEEC
T ss_pred HHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceE-EEEC
Confidence 4598873222 334443443345567888765543 344555444454 3441
Q ss_pred cceeEEecCCCCC-ceEEeecCChhhHHHHHHHHhhccccCc
Q 033474 63 NKHIMIDLGTGNN-NKINWALKDKQEFIDIVETVYRGARKGR 103 (118)
Q Consensus 63 nkHm~vD~GTgnn-nKin~~~~~kQefIDIiE~iyRgA~kGk 103 (118)
. .|.- .+..+..++.++|++.++.+-+...|+|
T Consensus 139 ~--------~G~~~~~~~G~~~~~~~l~~~l~~~l~~~~~~~ 172 (172)
T 3f9u_A 139 N--------EGNPLNKSYAYDEDISKYINFLQTGLENYRKEK 172 (172)
T ss_dssp T--------TSCBSSCCBCSCCCHHHHHHHHHHHHHHHHHTC
T ss_pred C--------CCCEEeeccCCCCCHHHHHHHHHHHHHHhhccC
Confidence 1 1211 3345667668999999999887766654
No 91
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=89.75 E-value=0.82 Score=33.11 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=42.2
Q ss_pred HHHHHhhHHHHHHhHHhhcc---ceEEEEEeC--CCcccccccccccCcceEEEEe
Q 033474 11 LILNLEMDEVLSSVAETIKN---FAVIYLVDI--SEVPDFNTMYELYDPSTVMFFF 61 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n---fA~IYlvDi--~eVpdfn~myeL~dP~tvMFFf 61 (118)
+--|.++...+.+++++.+. -..++.||. ++-++..+-|.+.--+|++||-
T Consensus 42 C~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~ 97 (244)
T 3q6o_A 42 CGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFX 97 (244)
T ss_dssp CHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEe
Confidence 34799999999999999987 678889998 6788899999997766765554
No 92
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=86.68 E-value=0.57 Score=33.31 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=47.7
Q ss_pred HHHHHhhHHHHHHhHH---hhc-cceEEEEEeCC-CcccccccccccCcceEEEEe-ecceeEEecCCCCCceEEeecCC
Q 033474 11 LILNLEMDEVLSSVAE---TIK-NFAVIYLVDIS-EVPDFNTMYELYDPSTVMFFF-RNKHIMIDLGTGNNNKINWALKD 84 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae---~v~-nfA~IYlvDi~-eVpdfn~myeL~dP~tvMFFf-rnkHm~vD~GTgnnnKin~~~~~ 84 (118)
+--|..|+..+.+.++ .++ +|. .||++ +-++-..-|+..-.+|++||= +++-+.-=.|...+....|.-++
T Consensus 56 C~~Ck~m~p~~~~~~~~~~~~~~~fv---~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~ 132 (151)
T 3ph9_A 56 CQYSQALKKVFAQNEEIQEMAQNKFI---MLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRD 132 (151)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHTCE---EEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGG
T ss_pred CHhHHHHHHHHhcCHHHHHHhhcCeE---EEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhh
Confidence 4579999999987533 222 444 44543 334445566666677765553 23332211343334444455566
Q ss_pred hhhHHHHHHHHhhcc
Q 033474 85 KQEFIDIVETVYRGA 99 (118)
Q Consensus 85 kQefIDIiE~iyRgA 99 (118)
-+++++-++.+++-.
T Consensus 133 ~~~ll~~~~~al~~~ 147 (151)
T 3ph9_A 133 LPLLIENMKKALRLI 147 (151)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777666543
No 93
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=85.95 E-value=1.7 Score=33.84 Aligned_cols=56 Identities=18% Similarity=0.260 Sum_probs=43.9
Q ss_pred HHHHHhhHHHHHHhHHhhc------cceEEEEEeCCCcccccccccccCcceEEEEeeccee
Q 033474 11 LILNLEMDEVLSSVAETIK------NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~------nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
+--|.++...+.++|++++ .-..+..||.++-++..+-|.+.--+|++||-+++.+
T Consensus 34 C~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~ 95 (382)
T 2r2j_A 34 CRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMM 95 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEe
Confidence 4579999999999999884 3478899999999999999999776676655434433
No 94
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=85.69 E-value=5.6 Score=25.96 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=51.0
Q ss_pred HHHhhHHHHHHhHHhhccc-eEEEEEeCCC-------------------------cccccccccccCcceEEEEeeccee
Q 033474 13 LNLEMDEVLSSVAETIKNF-AVIYLVDISE-------------------------VPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-A~IYlvDi~e-------------------------Vpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
.|..+-..|.+++++.+.- ..|+.|++++ -.++.+.|.+.--.|+ |++.
T Consensus 43 ~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~-~lid---- 117 (152)
T 2lrn_A 43 WCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHI-ILVD---- 117 (152)
T ss_dssp THHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEE-EEEC----
T ss_pred hHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeE-EEEC----
Confidence 4999999999999988764 6677788776 2345555666433343 4441
Q ss_pred EEecCCCCCceEEeecCChhhHHHHHHHHhhccccC
Q 033474 67 MIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKG 102 (118)
Q Consensus 67 ~vD~GTgnnnKin~~~~~kQefIDIiE~iyRgA~kG 102 (118)
.+-++.+..-+.+++.+.++.+-.++..+
T Consensus 118 -------~~G~i~~~~~~~~~l~~~l~~l~~~~~~~ 146 (152)
T 2lrn_A 118 -------PEGKIVAKELRGDDLYNTVEKFVNGAKEG 146 (152)
T ss_dssp -------TTSEEEEECCCTTHHHHHHHHHHTSSSSC
T ss_pred -------CCCeEEEeeCCHHHHHHHHHHHHhhcccc
Confidence 12244454446789999999887776544
No 95
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=85.69 E-value=2.8 Score=26.63 Aligned_cols=76 Identities=17% Similarity=0.193 Sum_probs=47.3
Q ss_pred HHHHhhHHHH---HHhHHhhccceEEEEEeCC--CcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChh
Q 033474 12 ILNLEMDEVL---SSVAETIKNFAVIYLVDIS--EVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 86 (118)
Q Consensus 12 ~~Cm~mDevL---~~~ae~v~nfA~IYlvDi~--eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQ 86 (118)
--|.++...| ..+++..+.-..++.+|.+ +-+++.+-|.+.--+|+++|=++..+. .++.+ ..+.+
T Consensus 40 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~--------~~~~G-~~~~~ 110 (130)
T 2kuc_A 40 GPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVV--------YRLVG-AEDAP 110 (130)
T ss_dssp THHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEE--------EEEES-CCCHH
T ss_pred ccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEE--------EEecC-CCCHH
Confidence 4699988888 6666666555567788987 577888888886655644431221111 11222 23567
Q ss_pred hHHHHHHHHh
Q 033474 87 EFIDIVETVY 96 (118)
Q Consensus 87 efIDIiE~iy 96 (118)
+|.+.++..-
T Consensus 111 ~l~~~l~~~~ 120 (130)
T 2kuc_A 111 ELLKKVKLGV 120 (130)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887653
No 96
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=85.54 E-value=1.1 Score=34.37 Aligned_cols=52 Identities=8% Similarity=0.016 Sum_probs=40.2
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|..|..+|.++|.+..+ ..++-||+++ +++.+-|.+.--+|++||-+++
T Consensus 145 C~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~ 196 (245)
T 1a0r_P 145 IKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGE 196 (245)
T ss_dssp STTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTE
T ss_pred ChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCE
Confidence 34699999999999998876 6778899888 8888888887666765554333
No 97
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=85.40 E-value=0.64 Score=30.62 Aligned_cols=74 Identities=11% Similarity=0.205 Sum_probs=47.1
Q ss_pred HHHHHhhHHHH---HHhHHhhccceEEEEEeC----CCcccccccccccCcceEEEEe-ecceeE-EecCCCCCceEEee
Q 033474 11 LILNLEMDEVL---SSVAETIKNFAVIYLVDI----SEVPDFNTMYELYDPSTVMFFF-RNKHIM-IDLGTGNNNKINWA 81 (118)
Q Consensus 11 ~~~Cm~mDevL---~~~ae~v~nfA~IYlvDi----~eVpdfn~myeL~dP~tvMFFf-rnkHm~-vD~GTgnnnKin~~ 81 (118)
+--|.+|...+ .+++++.++ ..++.||+ ++.+++.+-|.+.--+|+ +|| ++..+. . .++.+.
T Consensus 43 C~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~-~~~d~~G~~v~~-------~~~~G~ 113 (134)
T 2fwh_A 43 CVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGLPTI-LFFDGQGQEHPQ-------ARVTGF 113 (134)
T ss_dssp CHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSSSEE-EEECTTSCBCGG-------GCBCSC
T ss_pred CHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCCCEE-EEECCCCCEeee-------eeeeec
Confidence 44699999888 888888888 56688998 556677788888665564 444 221110 0 123332
Q ss_pred cCChhhHHHHHHH
Q 033474 82 LKDKQEFIDIVET 94 (118)
Q Consensus 82 ~~~kQefIDIiE~ 94 (118)
.++++|.+.++.
T Consensus 114 -~~~~~l~~~l~~ 125 (134)
T 2fwh_A 114 -MDAETFSAHLRD 125 (134)
T ss_dssp -CCHHHHHHHHHH
T ss_pred -cCHHHHHHHHHh
Confidence 356778777764
No 98
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=85.02 E-value=2.2 Score=32.74 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=43.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC--CcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS--EVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~--eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|.++-..+.++|++++.-..+..||++ +-+++.+-|.+.--+|++||-+++
T Consensus 47 C~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 47 CGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCc
Confidence 457999999999999999876777888877 678899999997777876665554
No 99
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=84.80 E-value=2.9 Score=26.39 Aligned_cols=52 Identities=19% Similarity=0.267 Sum_probs=35.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCc------ccccccccccCcceEEEEeecce
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEV------PDFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eV------pdfn~myeL~dP~tvMFFfrnkH 65 (118)
+--|.++-..|.+++++.+ ..++.+|+++- +++.+-|.+.--+|+++| ++..
T Consensus 41 C~~C~~~~p~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~-~~G~ 98 (118)
T 1zma_A 41 CPYCRKFAGTLSGVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHI-TDGQ 98 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHC--CCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEE-ETTE
T ss_pred CccHHHHHHHHHHHHHhcC--CeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEE-ECCE
Confidence 4569999999999998764 23566766543 466677888766676555 5433
No 100
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=84.50 E-value=2.8 Score=30.98 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=50.0
Q ss_pred HHHhhHHHHHHhHHhhccc-----eEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 13 LNLEMDEVLSSVAETIKNF-----AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-----A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
.|-+|-++|.++|+.-.++ ..+..+|.++-++.-+-|.+..-+|+.+| ++ .-+..+ ..++++
T Consensus 41 ~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g-----------~~~~~G-~~~~~~ 107 (243)
T 2hls_A 41 TCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-GG-----------EVRWTG-IPAGEE 107 (243)
T ss_dssp THHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-TT-----------TEEEES-CCCTTH
T ss_pred chHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC-----------ceeEcC-CCcHHH
Confidence 3899999999999853322 66788999999998889999876676555 32 222222 235567
Q ss_pred HHHHHHHHhhc
Q 033474 88 FIDIVETVYRG 98 (118)
Q Consensus 88 fIDIiE~iyRg 98 (118)
+-+.++....+
T Consensus 108 l~~fv~~~l~~ 118 (243)
T 2hls_A 108 IRALVEVIMRL 118 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 77777766543
No 101
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=84.44 E-value=1.4 Score=35.34 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=45.0
Q ss_pred HHHHHhhHHHHHHhHHhhccc-eEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNF-AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
+-.|.++...+.++|++++.. ..+..||.++-++..+-|.+.--+|++||-+++
T Consensus 43 C~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 97 (504)
T 2b5e_A 43 CGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSD 97 (504)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTC
T ss_pred CHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCc
Confidence 457999999999999999886 888999999999999999997766765554333
No 102
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=83.98 E-value=1.4 Score=34.84 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=44.7
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecce
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkH 65 (118)
+-.|.++...+.++|++++.-..++.||.++-++..+-|.+.--+|++|| ++..
T Consensus 33 C~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~-~~g~ 86 (481)
T 3f8u_A 33 CGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIF-RDGE 86 (481)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEE-ETTE
T ss_pred CHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEE-eCCc
Confidence 45699999999999999988778899999999999999999664576666 5443
No 103
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=83.46 E-value=0.67 Score=31.76 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=41.8
Q ss_pred hHHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeeccee
Q 033474 10 RLILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 10 ~~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
.+-.|-.+-++|.+++++.. ..+..+||++-|+.-+-|... =+++++|-.++++
T Consensus 39 ~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v 92 (107)
T 2fgx_A 39 GCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL 92 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE
T ss_pred CChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE
Confidence 45689999999999998754 566789999988887777776 4466677677765
No 104
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=82.04 E-value=4.7 Score=34.28 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=59.2
Q ss_pred HHHHHhhHHHHHHhHHhhcc--------ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCC--ceEEe
Q 033474 11 LILNLEMDEVLSSVAETIKN--------FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNN--NKINW 80 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n--------fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnn--nKin~ 80 (118)
+--|.+|...+.+++++.++ -..++.||+++-++..+-|.+.-.+|++||-+++-....--.|.. ..+.|
T Consensus 54 C~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~f 133 (470)
T 3qcp_A 54 CGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAF 133 (470)
T ss_dssp CHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHH
Confidence 45799999999999998862 367899999999999999999888887777665543333334433 22434
Q ss_pred e--cCChhhHHHHHHHH
Q 033474 81 A--LKDKQEFIDIVETV 95 (118)
Q Consensus 81 ~--~~~kQefIDIiE~i 95 (118)
. .-+++++...++.+
T Consensus 134 I~k~l~~~eLe~~~e~L 150 (470)
T 3qcp_A 134 ENSHLEVDELESEVRRL 150 (470)
T ss_dssp SCTTCCHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHH
Confidence 3 12456666666644
No 105
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=82.08 E-value=0.31 Score=31.38 Aligned_cols=85 Identities=13% Similarity=0.205 Sum_probs=52.2
Q ss_pred HHHHHhhHHHH---HHhHHhhccceEEEEEeC--CCcccccccccccCcceEEEEe-e-cceeEEecCCCCCceEEeecC
Q 033474 11 LILNLEMDEVL---SSVAETIKNFAVIYLVDI--SEVPDFNTMYELYDPSTVMFFF-R-NKHIMIDLGTGNNNKINWALK 83 (118)
Q Consensus 11 ~~~Cm~mDevL---~~~ae~v~nfA~IYlvDi--~eVpdfn~myeL~dP~tvMFFf-r-nkHm~vD~GTgnnnKin~~~~ 83 (118)
+--|.++...| .++++..++-..++.||+ ++-+++.+.|.+.--+|++||= + ++-..+. ++.+. .
T Consensus 31 C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~-------~~~G~-~ 102 (130)
T 2lst_A 31 CPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVG-------RLFGS-R 102 (130)
Confidence 45699999888 788887766456677888 4667888888886655654441 2 2210011 12222 3
Q ss_pred ChhhHHHHHHHHhhccccCc
Q 033474 84 DKQEFIDIVETVYRGARKGR 103 (118)
Q Consensus 84 ~kQefIDIiE~iyRgA~kGk 103 (118)
+.++|...++.+-.+...|.
T Consensus 103 ~~~~l~~~l~~~~~~~~~~~ 122 (130)
T 2lst_A 103 PRAEFLKELRQVCVKGGACG 122 (130)
Confidence 45778888887665554443
No 106
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=80.94 E-value=2 Score=36.42 Aligned_cols=55 Identities=11% Similarity=0.112 Sum_probs=39.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeeccee
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
+-.|.++...+.++|++++.-..++.||.++-++..+-|.+.--+|++|| ++...
T Consensus 145 C~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~g~~ 199 (780)
T 3apo_A 145 SSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSGMA 199 (780)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEEE-CTTSC
T ss_pred CcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEEE-eCCcE
Confidence 34699999999999999988788999999999999999999776676555 55443
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=80.03 E-value=7.7 Score=26.11 Aligned_cols=76 Identities=9% Similarity=0.174 Sum_probs=45.6
Q ss_pred HHHHHhhHHHH---HHhHHhhccceEEEEEeCCCcc-----------cccccccccCcceEEEEe-ecceeEEecCCCCC
Q 033474 11 LILNLEMDEVL---SSVAETIKNFAVIYLVDISEVP-----------DFNTMYELYDPSTVMFFF-RNKHIMIDLGTGNN 75 (118)
Q Consensus 11 ~~~Cm~mDevL---~~~ae~v~nfA~IYlvDi~eVp-----------dfn~myeL~dP~tvMFFf-rnkHm~vD~GTgnn 75 (118)
+--|.++...| .++++..+.=.+++.+|.++-+ ++.+.|.+.--+|+ +|+ ++-.+.-
T Consensus 60 C~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~d~~G~~~~------- 131 (154)
T 2ju5_A 60 CMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPEL-VFIDAEGKQLA------- 131 (154)
T ss_dssp CHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEE-EEECTTCCEEE-------
T ss_pred CHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEE-EEEcCCCCEEE-------
Confidence 45699998888 6666655333456778988765 56677777654554 444 2222211
Q ss_pred ceEEee-cCChhhHHHHHHHHh
Q 033474 76 NKINWA-LKDKQEFIDIVETVY 96 (118)
Q Consensus 76 nKin~~-~~~kQefIDIiE~iy 96 (118)
++ +. -.+.++|++.++.+-
T Consensus 132 -~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 132 -RM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp -EE-CCCTTCHHHHHHHHHHHH
T ss_pred -Ee-cCCCCCHHHHHHHHHHHH
Confidence 12 22 226788888887653
No 108
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=79.18 E-value=6.8 Score=27.53 Aligned_cols=74 Identities=11% Similarity=0.191 Sum_probs=53.2
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHHHH
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIV 92 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefIDIi 92 (118)
-|.++-..|.+++.+.. -..++.||+++-|+..+-|.+..-+|+++ +++ + .+..+ ..+.++|.+.+
T Consensus 150 ~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~---------~~~~G-~~~~~~l~~~l 215 (229)
T 2ywm_A 150 YCPSAAVMAWDFALAND-YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V---------AEFVG-AQPENAFLGYI 215 (229)
T ss_dssp THHHHHHHHHHHHHHCT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T---------EEEES-CCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCC-CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E---------EEeeC-CCCHHHHHHHH
Confidence 69999999999999864 46778999999999999999976555433 544 2 12333 24567888888
Q ss_pred HHHhhccc
Q 033474 93 ETVYRGAR 100 (118)
Q Consensus 93 E~iyRgA~ 100 (118)
+.....++
T Consensus 216 ~~~~~~~~ 223 (229)
T 2ywm_A 216 MAVYEKLK 223 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHhhhhh
Confidence 87766543
No 109
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=78.69 E-value=10 Score=23.97 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=25.9
Q ss_pred HHHhhHHHHHHhHHhhccc-eEEEEEeCCCccc
Q 033474 13 LNLEMDEVLSSVAETIKNF-AVIYLVDISEVPD 44 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVpd 44 (118)
.|..+-..|.+++++.+.- ..++.|+.++-++
T Consensus 45 ~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~ 77 (148)
T 3hcz_A 45 HCQQETPKLYDWWLKNRAKGIQVYAANIERKDE 77 (148)
T ss_dssp TTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSH
T ss_pred cHHHHHHHHHHHHHHhccCCEEEEEEEecCCHH
Confidence 4899999999999988775 6778888876665
No 110
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=78.49 E-value=3.5 Score=30.08 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=33.7
Q ss_pred HHHHHhhHH-HH--HHhHHhhccceEEEEEeCCCcccccccc--------cccCcceEEEE
Q 033474 11 LILNLEMDE-VL--SSVAETIKNFAVIYLVDISEVPDFNTMY--------ELYDPSTVMFF 60 (118)
Q Consensus 11 ~~~Cm~mDe-vL--~~~ae~v~nfA~IYlvDi~eVpdfn~my--------eL~dP~tvMFF 60 (118)
+--|..|.. ++ .++++.+.+-.+++-||+++-|+..+.| .+.-.+|++||
T Consensus 51 C~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l 111 (173)
T 3ira_A 51 CHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIM 111 (173)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEE
T ss_pred hHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeE
Confidence 456999887 32 4566666654566789999999987777 55554554444
No 111
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=77.75 E-value=4.5 Score=34.08 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=54.1
Q ss_pred HHHHHhhHHHHHHhHHhhcc---ceEEEEEeCC--CcccccccccccCcceEEEEeec----ceeEEecCCCCCceEEee
Q 033474 11 LILNLEMDEVLSSVAETIKN---FAVIYLVDIS--EVPDFNTMYELYDPSTVMFFFRN----KHIMIDLGTGNNNKINWA 81 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n---fA~IYlvDi~--eVpdfn~myeL~dP~tvMFFfrn----kHm~vD~GTgnnnKin~~ 81 (118)
+--|.++.-.+.+++++.+. -..++.||++ +-+++.+-|.+.--+|++||-++ +-+....|.
T Consensus 42 C~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~--------- 112 (519)
T 3t58_A 42 CGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAG--------- 112 (519)
T ss_dssp SHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSS---------
T ss_pred CHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCC---------
Confidence 34699999999999999987 6888999994 58899999999887776555422 112222221
Q ss_pred cCChhhHHHHHHHHhh
Q 033474 82 LKDKQEFIDIVETVYR 97 (118)
Q Consensus 82 ~~~kQefIDIiE~iyR 97 (118)
.+.+++.+.|+....
T Consensus 113 -~~~~~L~~~l~~~l~ 127 (519)
T 3t58_A 113 -ANVQTLRMRLIDALE 127 (519)
T ss_dssp -CCHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHh
Confidence 356777776666544
No 112
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=77.40 E-value=9.9 Score=29.99 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=51.0
Q ss_pred HHHHHhhHHHHHHhHHhhcc--ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 11 LILNLEMDEVLSSVAETIKN--FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~n--fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
+-.|.++-..|.+++++.+. -.+++-+|.++- +..+-|.+.--+|+.||-+++.+...--.|. .+.++|
T Consensus 382 C~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~--------~~~~~l 452 (481)
T 3f8u_A 382 CGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGG--------RELSDF 452 (481)
T ss_dssp BHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSC--------CSHHHH
T ss_pred ChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCC--------CCHHHH
Confidence 45799999999999999877 377788998775 5556677766567655543333222222222 456888
Q ss_pred HHHHHHH
Q 033474 89 IDIVETV 95 (118)
Q Consensus 89 IDIiE~i 95 (118)
++.|+..
T Consensus 453 ~~~l~~~ 459 (481)
T 3f8u_A 453 ISYLQRE 459 (481)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887764
No 113
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=76.41 E-value=8.3 Score=30.02 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=40.0
Q ss_pred HHHHhhH---HHHHHhHHhhccc-eEEEEEeCCCcccccccccccCcceEEEEeecce
Q 033474 12 ILNLEMD---EVLSSVAETIKNF-AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 12 ~~Cm~mD---evL~~~ae~v~nf-A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkH 65 (118)
..|.++- -.+.++|..++.- ..+..||.++-++..+-|.+.--+|+++|-+++.
T Consensus 46 ~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~ 103 (367)
T 3us3_A 46 ASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEV 103 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEE
T ss_pred HHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEECCcE
Confidence 4455332 3567778777653 7789999999999999999988888776655544
No 114
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=76.37 E-value=19 Score=26.45 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=53.3
Q ss_pred HHHhhHHHHHHhHHhhc----cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhH
Q 033474 13 LNLEMDEVLSSVAETIK----NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 88 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~----nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQef 88 (118)
-|-++-..|.++|.+.+ .-..+..+|+++-|+..+-|.+.-=+|+ +| +++.+ ..+ ..+.++|
T Consensus 152 ~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~-~i-~G~~~-----------~~G-~~~~~~l 217 (243)
T 2hls_A 152 YCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSI-AI-NGYLV-----------FVG-VPYEEDF 217 (243)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEE-EE-TTEEE-----------EES-CCCHHHH
T ss_pred CcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeE-EE-CCEEE-----------EeC-CCCHHHH
Confidence 59999999999998772 3356789999999988888888664553 33 44421 222 2356889
Q ss_pred HHHHHHHhhccccCce
Q 033474 89 IDIVETVYRGARKGRG 104 (118)
Q Consensus 89 IDIiE~iyRgA~kGkg 104 (118)
++.++......+...|
T Consensus 218 ~~~l~~~~~~~~~~~g 233 (243)
T 2hls_A 218 LDYVKSAAEGRLTVKG 233 (243)
T ss_dssp HHHHHHHHTTCCCCCC
T ss_pred HHHHHHHhhcccccCC
Confidence 9888887655444333
No 115
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=76.24 E-value=3.3 Score=31.59 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=39.0
Q ss_pred HHhhHHHHHHhHHhhcc--ceEEEEEeCCC-----ccccccccccc--CcceEEEEeecc
Q 033474 14 NLEMDEVLSSVAETIKN--FAVIYLVDISE-----VPDFNTMYELY--DPSTVMFFFRNK 64 (118)
Q Consensus 14 Cm~mDevL~~~ae~v~n--fA~IYlvDi~e-----Vpdfn~myeL~--dP~tvMFFfrnk 64 (118)
|- |..++.++|+.++. =..|+-||+++ -|+..+-|.+. .-+|++||-+++
T Consensus 36 Cg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~ 94 (240)
T 2qc7_A 36 GE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGD 94 (240)
T ss_dssp SH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTC
T ss_pred Cc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCC
Confidence 65 88888999988753 47889999765 78899999998 778877775444
No 116
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=75.85 E-value=10 Score=32.09 Aligned_cols=79 Identities=11% Similarity=0.041 Sum_probs=57.9
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEee---cCChhh
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA---LKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~---~~~kQe 87 (118)
+-.|.++-..|.++|++.+.-..+..||.++-|+..+.|.+..-+|+++| ++... -.++.+. -.+.++
T Consensus 687 C~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~g~~--------~~~~~G~~~g~~~~~~ 757 (780)
T 3apo_A 687 SGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY-QYERA--------KKSIWEEQINSRDAKT 757 (780)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-EEETT--------TTEEEEEEECCCCHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCCcCCEEEEE-cCCCc--------cccccCcccCCcCHHH
Confidence 34699999999999998875577889999999999999999776676555 43211 1234443 357789
Q ss_pred HHHHHHHHhhc
Q 033474 88 FIDIVETVYRG 98 (118)
Q Consensus 88 fIDIiE~iyRg 98 (118)
+.+.|+..-..
T Consensus 758 l~~~l~~~l~~ 768 (780)
T 3apo_A 758 IAALIYGKLET 768 (780)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHH
Confidence 99998887644
No 117
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=75.72 E-value=16 Score=25.88 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=48.6
Q ss_pred HHHHHhhHHHH---HHhHHhh-ccceEEEEEeCCC--cccccccccccCcceEEEEeecceeEEecCCCCC-ceEEeecC
Q 033474 11 LILNLEMDEVL---SSVAETI-KNFAVIYLVDISE--VPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNN-NKINWALK 83 (118)
Q Consensus 11 ~~~Cm~mDevL---~~~ae~v-~nfA~IYlvDi~e--Vpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnn-nKin~~~~ 83 (118)
..-|..|++-. ..+++.+ ++|.. .-+|+++ -..+-+.|.+.-++++.|| ..+ ||.. ..+.+ -
T Consensus 54 C~~C~~me~~vf~d~~V~~~l~~~fv~-v~~d~~~~~~~~l~~~y~v~~~P~~~fl-d~~-------~G~~l~~~~g--~ 122 (153)
T 2dlx_A 54 DFACQCLNRDVWSNEAVKNIIREHFIF-WQVYHDSEEGQRYIQFYKLGDFPYVSIL-DPR-------TGQKLVEWHQ--L 122 (153)
T ss_dssp TTTHHHHHHHTTTCHHHHHHHHHTEEE-EEEESSSHHHHHHHHHHTCCSSSEEEEE-CTT-------TCCCCEEESS--C
T ss_pred CHhHHHHHHHhcCCHHHHHHHHcCeEE-EEEecCCHhHHHHHHHcCCCCCCEEEEE-eCC-------CCcEeeecCC--C
Confidence 56799997655 3455666 35544 5678865 2346677888777886444 322 2322 22333 5
Q ss_pred ChhhHHHHHHHHhhcc
Q 033474 84 DKQEFIDIVETVYRGA 99 (118)
Q Consensus 84 ~kQefIDIiE~iyRgA 99 (118)
+.++|++.++.+-..-
T Consensus 123 ~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 123 DVSSFLDQVTGFLGEH 138 (153)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc
Confidence 8999999998876543
No 118
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=74.15 E-value=3.1 Score=24.70 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=44.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcc----ccccccc--ccCcceEEEEeecceeEEecCCCCCceEEeecCC
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVP----DFNTMYE--LYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 84 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVp----dfn~mye--L~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~ 84 (118)
.-.|.++-.+|.+++++-+++ .+..+|+++-| ++.+.|. ...-+++ |.+++++- |
T Consensus 11 C~~C~~~~~~l~~l~~~~~~i-~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~------------- 71 (85)
T 1ego_A 11 CPYCVRAKDLAEKLSNERDDF-QYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G------------- 71 (85)
T ss_dssp STHHHHHHHHHHHHHHHHSSC-EEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S-------------
T ss_pred CCCHHHHHHHHHHHHhcCCCc-eEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C-------------
Confidence 457999999999998875664 45678886644 6776676 4443453 56777641 1
Q ss_pred hhhHHHHHHHHh
Q 033474 85 KQEFIDIVETVY 96 (118)
Q Consensus 85 kQefIDIiE~iy 96 (118)
.+++...++.-|
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 257777777665
No 119
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=73.03 E-value=5.2 Score=30.75 Aligned_cols=72 Identities=10% Similarity=0.140 Sum_probs=49.8
Q ss_pred HHhhHHHHHHhHHhhcc---ceEEEEEeCCC-----ccccccccccc--CcceEEEEeecc-eeEEecC-CCCCceEEee
Q 033474 14 NLEMDEVLSSVAETIKN---FAVIYLVDISE-----VPDFNTMYELY--DPSTVMFFFRNK-HIMIDLG-TGNNNKINWA 81 (118)
Q Consensus 14 Cm~mDevL~~~ae~v~n---fA~IYlvDi~e-----Vpdfn~myeL~--dP~tvMFFfrnk-Hm~vD~G-TgnnnKin~~ 81 (118)
|- |..++.++|+..+. =..|+-||+++ -|+..+-|.+. .-+|++||- ++ .-..++- .|
T Consensus 47 Cg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-------- 116 (248)
T 2c0g_A 47 GE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-------- 116 (248)
T ss_dssp SH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTS--------
T ss_pred Cc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccC--------
Confidence 55 88889999998743 57889999988 88999999998 777877764 55 2233331 12
Q ss_pred cCChhhHHHHHHHH
Q 033474 82 LKDKQEFIDIVETV 95 (118)
Q Consensus 82 ~~~kQefIDIiE~i 95 (118)
..++++|.+.|+..
T Consensus 117 ~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 117 DVTLDNLKAFVSAN 130 (248)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 23456666666643
No 120
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=71.09 E-value=9.9 Score=28.98 Aligned_cols=47 Identities=13% Similarity=0.202 Sum_probs=37.2
Q ss_pred HHHHHHhHHhhccc-eEEEEEeCCCcccccccccccCcceEEEEeecc
Q 033474 18 DEVLSSVAETIKNF-AVIYLVDISEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 18 DevL~~~ae~v~nf-A~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
..++.++|++++.- ..+..||.++-++..+-|.+.--+|+++|-+++
T Consensus 53 ~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 100 (350)
T 1sji_A 53 EIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR 100 (350)
T ss_dssp HHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE
T ss_pred hHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc
Confidence 33478889888764 778999999999999999998877876764444
No 121
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=70.71 E-value=5.9 Score=29.20 Aligned_cols=52 Identities=8% Similarity=0.034 Sum_probs=39.0
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeeccee
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
-.|..|...|.++|++..+ ..++-||++ -|++.+-|.+.--+|++|| ++-.+
T Consensus 133 ~~C~~l~p~l~~la~~~~~-v~f~~vd~~-~~~l~~~~~i~~~PTl~~~-~~G~~ 184 (217)
T 2trc_P 133 RGCDALNSSLECLAAEYPM-VKFCKIRAS-NTGAGDRFSSDVLPTLLVY-KGGEL 184 (217)
T ss_dssp TTHHHHHHHHHHHHTTCTT-SEEEEEEHH-HHTCSTTSCGGGCSEEEEE-ETTEE
T ss_pred ccHHHHHHHHHHHHHHCCC-eEEEEEECC-cHHHHHHCCCCCCCEEEEE-ECCEE
Confidence 4699999999999998764 466788887 6777778888666676555 55444
No 122
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=69.58 E-value=18 Score=22.66 Aligned_cols=30 Identities=10% Similarity=0.047 Sum_probs=23.1
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS 40 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~ 40 (118)
+-.|.++-..|.+++++.+.-..++.|+++
T Consensus 41 C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~ 70 (148)
T 2b5x_A 41 CHLCKEAMPQVNEFRDKYQDQLNVVAVHMP 70 (148)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred CHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence 346999999999999988764666777754
No 123
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=69.54 E-value=22 Score=26.74 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=37.6
Q ss_pred HHHHHhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccccCcceEEEEee
Q 033474 11 LILNLEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYELYDPSTVMFFFR 62 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL~dP~tvMFFfr 62 (118)
+--|.++-..|.++|++.++- .++..+|.++-+ .+-|.+..-+|++||-+
T Consensus 279 C~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~ 330 (361)
T 3uem_A 279 CGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPA 330 (361)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECS
T ss_pred CHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEEC
Confidence 346999999999999998875 677888987755 45677777677655533
No 124
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=69.46 E-value=8.6 Score=22.06 Aligned_cols=51 Identities=6% Similarity=-0.156 Sum_probs=34.8
Q ss_pred hHHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecce
Q 033474 10 RLILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 10 ~~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkH 65 (118)
..-.|.++...|.+++++.+.=..++-+| -++..+-|.+.--+|+++ +++.
T Consensus 10 wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~ 60 (77)
T 1ilo_A 10 GCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGEL 60 (77)
T ss_dssp SSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEE
T ss_pred CChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEE
Confidence 34569999999999999887444555566 456666777766556444 5554
No 125
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=67.85 E-value=4.5 Score=26.32 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=32.5
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC------CcccccccccccCcceEEE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS------EVPDFNTMYELYDPSTVMF 59 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~------eVpdfn~myeL~dP~tvMF 59 (118)
+--|.+|..+|.+++++++ .||++ +-++..+-|.+.-.+|++|
T Consensus 24 C~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 24 CPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp CHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred CHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE
Confidence 3469999999999997765 45555 6788888999988778433
No 126
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=67.81 E-value=19 Score=22.28 Aligned_cols=74 Identities=12% Similarity=0.035 Sum_probs=45.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCC----------------------cccccccccccCcceEEEEe-ecceeE
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISE----------------------VPDFNTMYELYDPSTVMFFF-RNKHIM 67 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~e----------------------Vpdfn~myeL~dP~tvMFFf-rnkHm~ 67 (118)
+-.|.++-..|.+++++.+++ .++.|+.++ -+++.+.|.+.--.++ +++ ++..+.
T Consensus 36 C~~C~~~~~~l~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~-~lid~~G~i~ 113 (136)
T 1lu4_A 36 CPFCNAEAPSLSQVAAANPAV-TFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAF-VFYRADGTST 113 (136)
T ss_dssp CHHHHHHHHHHHHHHHHCTTS-EEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEE-EEECTTSCEE
T ss_pred ChhHHHHHHHHHHHHHHCCCc-EEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEE-EEECCCCcEE
Confidence 346999999999999988754 556777765 4555566666544453 444 344443
Q ss_pred EecC--CCCCceEEeecCChhhHHHHHHHH
Q 033474 68 IDLG--TGNNNKINWALKDKQEFIDIVETV 95 (118)
Q Consensus 68 vD~G--TgnnnKin~~~~~kQefIDIiE~i 95 (118)
-.. +|. .+.+++.+.++.+
T Consensus 114 -~~~~~~g~--------~~~~~l~~~l~~l 134 (136)
T 1lu4_A 114 -FVNNPTAA--------MSQDELSGRVAAL 134 (136)
T ss_dssp -EECCSSSC--------CCHHHHHHHHHHC
T ss_pred -EEEcCCCc--------cCHHHHHHHHHHH
Confidence 111 121 2467777777653
No 127
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=65.37 E-value=7.7 Score=24.91 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=43.6
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhhHHH
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFID 90 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQefID 90 (118)
+-.|-++-.+|.+.+.+. ..-||+++-|+..+-|.+.-| |+++ -+++++- |.+ +++++..
T Consensus 11 C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~vP-tl~~-~~G~~v~------------g~~-~~~~L~~ 70 (87)
T 1ttz_A 11 CHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLRVP-VLRD-PMGRELD------------WPF-DAPRLRA 70 (87)
T ss_dssp CHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTTCS-EEEC-TTCCEEE------------SCC-CHHHHHH
T ss_pred CchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCCcC-eEEE-ECCEEEe------------CCC-CHHHHHH
Confidence 557999999998887642 357999999988877777644 5444 4566651 333 5667766
Q ss_pred HHHH
Q 033474 91 IVET 94 (118)
Q Consensus 91 IiE~ 94 (118)
.++.
T Consensus 71 ~l~~ 74 (87)
T 1ttz_A 71 WLDA 74 (87)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 128
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=64.74 E-value=13 Score=29.64 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=48.1
Q ss_pred HHHHHhhHHHHHHhHHhhc-c--ceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 11 LILNLEMDEVLSSVAETIK-N--FAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~-n--fA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
+-.|.+|-..+.+++++.+ . -.++.-+|.++-+.- + |.+.--+|++||-+++-....-..| ..+.++
T Consensus 388 C~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G--------~~~~~~ 457 (504)
T 2b5e_A 388 CGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQG--------SRSLDS 457 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCS--------CCCHHH
T ss_pred ChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecC--------CCCHHH
Confidence 4579999999999999876 1 356678887654433 3 7776666876664333221222223 236678
Q ss_pred HHHHHHHH
Q 033474 88 FIDIVETV 95 (118)
Q Consensus 88 fIDIiE~i 95 (118)
+++.|+..
T Consensus 458 l~~~i~~~ 465 (504)
T 2b5e_A 458 LFDFIKEN 465 (504)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88777764
No 129
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=64.53 E-value=25 Score=22.53 Aligned_cols=81 Identities=9% Similarity=0.078 Sum_probs=47.8
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeC---------------------------CCcccccccccccCcceEEEEeecc
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDI---------------------------SEVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi---------------------------~eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
-.|..+-..|.+++++. ++. ++.|++ ++-+.+.+.|.+.--++++++-++.
T Consensus 43 ~~C~~~~~~l~~l~~~~-~v~-~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G 120 (154)
T 3ia1_A 43 TVCKAEFPGLHRVAEET-GVP-FYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREG 120 (154)
T ss_dssp HHHHHHHHHHHHHHHHH-CCC-EEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTS
T ss_pred hhHHHHHHHHHHHHHHc-CCe-EEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCC
Confidence 37999999999999988 554 456666 2445566666664433433332322
Q ss_pred eeEEecCCCCCceEEeecCChhhHHHHHHHHhhccccCc
Q 033474 65 HIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGR 103 (118)
Q Consensus 65 Hm~vD~GTgnnnKin~~~~~kQefIDIiE~iyRgA~kGk 103 (118)
.+.- ++.+ ..+.+++.+.|+....+..+|-
T Consensus 121 ~i~~--------~~~g-~~~~~~l~~~l~~~~~~~~~~~ 150 (154)
T 3ia1_A 121 KVVA--------LFAG-RAGREALLDALLLAGADLEGHH 150 (154)
T ss_dssp EEEE--------EEES-BCCHHHHHHHHHHTTCCC----
T ss_pred CEEE--------EEcC-CCCHHHHHHHHHhccCcccccc
Confidence 2211 1111 2467899999998887776653
No 130
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=62.81 E-value=32 Score=23.14 Aligned_cols=98 Identities=7% Similarity=0.113 Sum_probs=54.0
Q ss_pred HHHHhhHHHHHHhHHhhccc-eEEEEEeCCC-----------------------------cccccccccccC-cceEEEE
Q 033474 12 ILNLEMDEVLSSVAETIKNF-AVIYLVDISE-----------------------------VPDFNTMYELYD-PSTVMFF 60 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nf-A~IYlvDi~e-----------------------------Vpdfn~myeL~d-P~tvMFF 60 (118)
-.|..+-..|.+++++.++- ..++.|+++. -.+..+.|.+.- |.+ |+
T Consensus 59 ~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~--~l 136 (196)
T 2ywi_A 59 PFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDF--YI 136 (196)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEE--EE
T ss_pred ccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeE--EE
Confidence 46888888899998887653 5667777632 122334444432 433 55
Q ss_pred eecceeEEecCCCCCceE--EeecCChhhHHHHHHHHhhcccc---CceeEEccCCc
Q 033474 61 FRNKHIMIDLGTGNNNKI--NWALKDKQEFIDIVETVYRGARK---GRGLVIAPKDY 112 (118)
Q Consensus 61 frnkHm~vD~GTgnnnKi--n~~~~~kQefIDIiE~iyRgA~k---GkglV~SP~dy 112 (118)
+..+...+..|.++++.- .+ ..+.+++.+.|+.+-.+... -.--+-||.+|
T Consensus 137 id~~G~i~~~~~~~~~~~~~~g-~~~~~~l~~~i~~ll~~~~~~~~~~~~~gC~~~~ 192 (196)
T 2ywi_A 137 FDRDLKCVYRGQLDDSRPNNGI-PVTGESIRAALDALLEGRPVPEKQKPSIGCSIKW 192 (196)
T ss_dssp EETTCBEEEEECSSSCCTTTCC-CCCCHHHHHHHHHHHHTCCCCSCCCCCEEEECCC
T ss_pred EcCCCeEEEccccCcccccccC-ccCHHHHHHHHHHHHcCCCCCCCCCCCCceeeee
Confidence 543333344444443221 12 23668999999988765321 12233466665
No 131
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=61.69 E-value=27 Score=21.89 Aligned_cols=72 Identities=11% Similarity=0.084 Sum_probs=46.5
Q ss_pred HHHhhHHHHHHhHHhh-ccc-eEEEEEeCCCcc-------------------------cccccccccCcceEEEEeecce
Q 033474 13 LNLEMDEVLSSVAETI-KNF-AVIYLVDISEVP-------------------------DFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v-~nf-A~IYlvDi~eVp-------------------------dfn~myeL~dP~tvMFFfrnkH 65 (118)
.|..+-..|.+++++. +.- ..++.|++++-+ .+.+.|.+.--+++ +++.
T Consensus 47 ~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~-~lid--- 122 (148)
T 3fkf_A 47 PQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTN-ILLS--- 122 (148)
T ss_dssp CCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEE-EEEC---
T ss_pred HHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEE-EEEC---
Confidence 3999999999999987 443 667778776533 45556666443343 4441
Q ss_pred eEEecCCCCCceEEeecCChhhHHHHHHHHh
Q 033474 66 IMIDLGTGNNNKINWALKDKQEFIDIVETVY 96 (118)
Q Consensus 66 m~vD~GTgnnnKin~~~~~kQefIDIiE~iy 96 (118)
.+-++.+...+.+++.+.++.+-
T Consensus 123 --------~~G~i~~~~~~~~~l~~~l~~ll 145 (148)
T 3fkf_A 123 --------PTGKILARDIQGEALTGKLKELL 145 (148)
T ss_dssp --------TTSBEEEESCCHHHHHHHHHHHC
T ss_pred --------CCCeEEEecCCHHHHHHHHHHHH
Confidence 12345555558888888888764
No 132
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=61.05 E-value=25 Score=26.44 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=53.5
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCC--CcccccccccccC--cceEEEEeecceeEEecCCCCCceEE--eecCChh
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDIS--EVPDFNTMYELYD--PSTVMFFFRNKHIMIDLGTGNNNKIN--WALKDKQ 86 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~--eVpdfn~myeL~d--P~tvMFFfrnkHm~vD~GTgnnnKin--~~~~~kQ 86 (118)
.|.++-..|.++|++.+.-..+..+|.+ +-+...+.|.+.. =+++.+|-.++ +..|.. .-..+.+
T Consensus 149 ~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~---------~~~ky~~~~~~~~~~ 219 (361)
T 3uem_A 149 DYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE---------EMTKYKPESEELTAE 219 (361)
T ss_dssp SHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC-----------CCEECCSSCCCCHH
T ss_pred hHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC---------cccccCCCccccCHH
Confidence 4888889999999999876788889998 6788888898853 34554443222 112222 1134678
Q ss_pred hHHHHHHHHhhcc
Q 033474 87 EFIDIVETVYRGA 99 (118)
Q Consensus 87 efIDIiE~iyRgA 99 (118)
++.+.++....|.
T Consensus 220 ~l~~fi~~~l~g~ 232 (361)
T 3uem_A 220 RITEFCHRFLEGK 232 (361)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 8888888887765
No 133
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=59.06 E-value=10 Score=26.97 Aligned_cols=50 Identities=8% Similarity=-0.140 Sum_probs=36.3
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeCCCccccccccc---ccCcceEEEEeec
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYE---LYDPSTVMFFFRN 63 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~mye---L~dP~tvMFFfrn 63 (118)
--|..+--+|.+++++-++ ..+..||+++-|+..+-|. +..-+|+ +||++
T Consensus 67 ~pC~~~~P~l~~l~~~~~~-v~~~~v~~d~~~~~~~~~~~~~v~~iPt~-i~~~~ 119 (167)
T 1z6n_A 67 PDCQINLAALDFAQRLQPN-IELAIISKGRAEDDLRQRLALERIAIPLV-LVLDE 119 (167)
T ss_dssp HHHHHHHHHHHHHHHHCTT-EEEEEECHHHHHHHTTTTTTCSSCCSSEE-EEECT
T ss_pred hhHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHHHHcCCCCcCeE-EEECC
Confidence 4699999999999987665 5678899998888766665 5444454 44544
No 134
>2zci_A Phosphoenolpyruvate carboxykinase [GTP], phosphoenolpyruvate; GTP-dependent, signaling protein, lyase; 2.30A {Corynebacterium glutamicum}
Probab=55.74 E-value=8.4 Score=34.57 Aligned_cols=37 Identities=32% Similarity=0.465 Sum_probs=30.0
Q ss_pred EecCCCCCceEEeecCChhhHHHHHHHHhhccccCceeEEccC
Q 033474 68 IDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPK 110 (118)
Q Consensus 68 vD~GTgnnnKin~~~~~kQefIDIiE~iyRgA~kGkglV~SP~ 110 (118)
-|.|..|| --+.+|+...+...|+|.||||.+-|-|.
T Consensus 95 ~dagptnn------w~~p~e~~~~l~~~f~G~M~GRTMYViPf 131 (610)
T 2zci_A 95 EDAGPTNN------WAPPQAMKDEMSKHYAGSMKGRTMYVVPF 131 (610)
T ss_dssp TTTCTTSC------CCCHHHHHHHHHHHHTTTTTTSEEEEEEE
T ss_pred hhcCCCcC------ccCHHHHHHHHHHhCCcccCCCEEEEEee
Confidence 35555555 34779999999999999999999998774
No 135
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=52.11 E-value=5.1 Score=30.84 Aligned_cols=23 Identities=30% Similarity=0.446 Sum_probs=12.7
Q ss_pred EEecCCCCCceEEeecCChhhHHHHHHH
Q 033474 67 MIDLGTGNNNKINWALKDKQEFIDIVET 94 (118)
Q Consensus 67 ~vD~GTgnnnKin~~~~~kQefIDIiE~ 94 (118)
-+|+||||++ |.++++|++++..
T Consensus 10 ~~~~~~~~~~-----~~~~~~~~~~l~~ 32 (232)
T 3mjd_A 10 GVDLGTENLY-----FQSNAMFIEFALK 32 (232)
T ss_dssp -------CCS-----SCCCCCHHHHHHH
T ss_pred ccccCCCCCC-----CCcHHHHHHHHHH
Confidence 4899999985 7888999887654
No 136
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=50.96 E-value=46 Score=21.33 Aligned_cols=32 Identities=9% Similarity=-0.140 Sum_probs=25.0
Q ss_pred HHHHhhHHHHHHhHHhhccc-eEEEEEeCCCcc
Q 033474 12 ILNLEMDEVLSSVAETIKNF-AVIYLVDISEVP 43 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVp 43 (118)
-.|..+-..|.+++++.++- ..++.|++++-+
T Consensus 47 ~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~ 79 (165)
T 3or5_A 47 PPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQL 79 (165)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCH
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEECCCCH
Confidence 35999999999999988764 667778876633
No 137
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=50.53 E-value=46 Score=21.13 Aligned_cols=78 Identities=6% Similarity=-0.013 Sum_probs=45.8
Q ss_pred HHHhhHHHHHHhHHhhccc-eEEEEEeCCCcc-----------------------cccccccccCcceEEEEeecceeEE
Q 033474 13 LNLEMDEVLSSVAETIKNF-AVIYLVDISEVP-----------------------DFNTMYELYDPSTVMFFFRNKHIMI 68 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVp-----------------------dfn~myeL~dP~tvMFFfrnkHm~v 68 (118)
.|.++-..|.+++++.++- ..++.|+.++-+ ++.+.|.+.--.++ +++...--.+
T Consensus 44 ~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~-~lid~~G~i~ 122 (152)
T 2lja_A 44 PCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRF-ILLDRDGKII 122 (152)
T ss_dssp GGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCE-EEECTTSCEE
T ss_pred hHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEE-EEECCCCeEE
Confidence 4999889999999887653 566777776643 34445555443342 4543111112
Q ss_pred ecCCCCCceEEeecCChhhHHHHHHHHhhcc
Q 033474 69 DLGTGNNNKINWALKDKQEFIDIVETVYRGA 99 (118)
Q Consensus 69 D~GTgnnnKin~~~~~kQefIDIiE~iyRgA 99 (118)
....| ..+.+++.++++.+..+-
T Consensus 123 ~~~~g--------~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 123 SANMT--------RPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp ESSCC--------CTTCHHHHHHHHHHHTCC
T ss_pred EccCC--------CCCHHHHHHHHHHHhccc
Confidence 22222 236688888888775543
No 138
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=50.15 E-value=46 Score=21.09 Aligned_cols=31 Identities=6% Similarity=-0.051 Sum_probs=24.4
Q ss_pred HHHhhHHHHHHhHHhhccc-eEEEEEeCCCcc
Q 033474 13 LNLEMDEVLSSVAETIKNF-AVIYLVDISEVP 43 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-A~IYlvDi~eVp 43 (118)
.|..+-..|.+++++.+.- ..++.|+++.-+
T Consensus 42 ~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~ 73 (152)
T 3gl3_A 42 PCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKT 73 (152)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEECCCCH
Confidence 4999999999999988775 667778877544
No 139
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=48.58 E-value=50 Score=21.05 Aligned_cols=78 Identities=12% Similarity=0.123 Sum_probs=46.3
Q ss_pred HHHHhhHHHHHHhHHhhcc-ceEEEEEeCCCcc----------------------cccccccccCcceEEEEe-ecceeE
Q 033474 12 ILNLEMDEVLSSVAETIKN-FAVIYLVDISEVP----------------------DFNTMYELYDPSTVMFFF-RNKHIM 67 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~n-fA~IYlvDi~eVp----------------------dfn~myeL~dP~tvMFFf-rnkHm~ 67 (118)
-.|..+-..|.+++++.++ =..++.|++++-+ .+.+.|.+.--.++ |++ ++..+.
T Consensus 39 ~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~-~lid~~G~i~ 117 (151)
T 2f9s_A 39 EPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTT-FLINPEGKVV 117 (151)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEE-EEECTTSEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeE-EEECCCCcEE
Confidence 4799999999999998875 2566777775532 34445555433343 444 222221
Q ss_pred EecCCCCCceEEeecCChhhHHHHHHHHhhcc
Q 033474 68 IDLGTGNNNKINWALKDKQEFIDIVETVYRGA 99 (118)
Q Consensus 68 vD~GTgnnnKin~~~~~kQefIDIiE~iyRgA 99 (118)
.. +.+ ..+.+++.+.|+.+-.+.
T Consensus 118 -~~-------~~G-~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 118 -KV-------VTG-TMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp -EE-------EES-CCCHHHHHHHHHHHSCC-
T ss_pred -EE-------EeC-CCCHHHHHHHHHHHHhhh
Confidence 11 111 126789999999876654
No 140
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=47.37 E-value=19 Score=25.10 Aligned_cols=56 Identities=9% Similarity=0.124 Sum_probs=40.0
Q ss_pred hHHHHHhhHHHHHHhHHhhccceEEEEEeCCCccc----cccccccc-CcceEEEEeecceeEE
Q 033474 10 RLILNLEMDEVLSSVAETIKNFAVIYLVDISEVPD----FNTMYELY-DPSTVMFFFRNKHIMI 68 (118)
Q Consensus 10 ~~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpd----fn~myeL~-dP~tvMFFfrnkHm~v 68 (118)
++-.|..+-..+.+.+++ .=+.+|.||+++.++ --+-|.+. .-+|+ ++|+|.-..-
T Consensus 35 wCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~-il~k~G~~v~ 95 (112)
T 3iv4_A 35 TCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA-FYFVNGEMVW 95 (112)
T ss_dssp TCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE-EEEETTEEEE
T ss_pred cCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeE-EEEECCEEEE
Confidence 456799999999999885 446778999999877 56777776 34565 4446654443
No 141
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=44.85 E-value=45 Score=21.02 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=23.2
Q ss_pred HHHHHhhHHHHHHhHHhhc--cceEEEEEeCCC
Q 033474 11 LILNLEMDEVLSSVAETIK--NFAVIYLVDISE 41 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~--nfA~IYlvDi~e 41 (118)
+-.|..+-..|.+++++.+ +-..++.|++++
T Consensus 40 C~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~ 72 (144)
T 1o73_A 40 CPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE 72 (144)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS
T ss_pred CHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC
Confidence 3469999999999999887 344556677765
No 142
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=44.15 E-value=51 Score=20.94 Aligned_cols=30 Identities=10% Similarity=-0.003 Sum_probs=23.5
Q ss_pred HHHHhhHHHHHHhHHhhc--cceEEEEEeCCC
Q 033474 12 ILNLEMDEVLSSVAETIK--NFAVIYLVDISE 41 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~--nfA~IYlvDi~e 41 (118)
-.|.++-..|.+++++.+ +=..|+.|++++
T Consensus 41 ~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~ 72 (144)
T 1i5g_A 41 PPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE 72 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC
Confidence 469999999999999887 345667777765
No 143
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=43.29 E-value=63 Score=20.69 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHhhHHHHHHhHHhh-ccc-eEEEEEeCCCcc-------------------------cccccccccCcceEEEEeeccee
Q 033474 14 NLEMDEVLSSVAETI-KNF-AVIYLVDISEVP-------------------------DFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 14 Cm~mDevL~~~ae~v-~nf-A~IYlvDi~eVp-------------------------dfn~myeL~dP~tvMFFfrnkHm 66 (118)
|..+-..|.+++++. ++- ..|+.|++++-+ ...+-|.+.--+++ |++.
T Consensus 50 C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~-~lid---- 124 (150)
T 3fw2_A 50 QKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPAN-ILLS---- 124 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEE-EEEC----
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeE-EEEC----
Confidence 888888999999987 333 566777777654 33344444332332 4441
Q ss_pred EEecCCCCCceEEeecCChhhHHHHHHHHhh
Q 033474 67 MIDLGTGNNNKINWALKDKQEFIDIVETVYR 97 (118)
Q Consensus 67 ~vD~GTgnnnKin~~~~~kQefIDIiE~iyR 97 (118)
.+-++.+...+.+++.+.++.+-+
T Consensus 125 -------~~G~i~~~~~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 125 -------SDGKILAKNLRGEELKKKIENIVE 148 (150)
T ss_dssp -------TTSBEEEESCCHHHHHHHHHHHHH
T ss_pred -------CCCEEEEccCCHHHHHHHHHHHHh
Confidence 122455555588888888887654
No 144
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=43.23 E-value=66 Score=20.88 Aligned_cols=30 Identities=7% Similarity=0.089 Sum_probs=23.0
Q ss_pred HHHHhhHHHHHHhHHhhc-cceEEEEEeCCC
Q 033474 12 ILNLEMDEVLSSVAETIK-NFAVIYLVDISE 41 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~-nfA~IYlvDi~e 41 (118)
-.|..+-..|.+++++.+ .=..++.|+.++
T Consensus 54 ~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 54 PYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp HHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 369999999999999887 235667778766
No 145
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=42.70 E-value=15 Score=23.41 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=32.2
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC--CcccccccccccCcceEEEEeecce
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS--EVPDFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~--eVpdfn~myeL~dP~tvMFFfrnkH 65 (118)
+-.|.++-.+|.+++.. ..+..+|++ +-++..+-|. ..-++ +|.++++
T Consensus 27 C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~~el~~~~g-~~vP~--l~~~g~~ 76 (100)
T 1wjk_A 27 CPLCDEAKEVLQPYKDR----FILQEVDITLPENSTWYERYK-FDIPV--FHLNGQF 76 (100)
T ss_dssp CHHHHHHHHHTSTTSSS----SEEEEEETTSSTTHHHHHHSS-SSCSE--EEESSSE
T ss_pred CcchHHHHHHHHHhhhC----CeEEEEECCCcchHHHHHHHC-CCCCE--EEECCEE
Confidence 45799998888877654 466789998 6676666666 44234 3455554
No 146
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=41.20 E-value=59 Score=19.75 Aligned_cols=29 Identities=14% Similarity=-0.102 Sum_probs=22.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS 40 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~ 40 (118)
+-.|..+-..|.+++++.+++ .++.|+.+
T Consensus 37 C~~C~~~~~~l~~~~~~~~~~-~~~~v~~~ 65 (136)
T 1zzo_A 37 CPTCQGEAPVVGQVAASHPEV-TFVGVAGL 65 (136)
T ss_dssp CHHHHHHHHHHHHHHHHCTTS-EEEEEECS
T ss_pred ChhHHHHHHHHHHHHHHcCCe-EEEEEeCC
Confidence 346999999999999988854 45666664
No 147
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=40.91 E-value=40 Score=27.45 Aligned_cols=52 Identities=13% Similarity=-0.008 Sum_probs=40.9
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeCCCcccccccccccCcceEEEEeeccee
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm 66 (118)
--|-.+-.+|.++|..-. -..+..+|+++-|+.-+-|.+..-+|+ |++++++
T Consensus 130 ~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~--~i~g~~~ 181 (521)
T 1hyu_A 130 HNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAV--FVNGKEF 181 (521)
T ss_dssp SSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEE--EETTEEE
T ss_pred cCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEE--EECCEEE
Confidence 359999999999998755 356678999999999998988765564 3388876
No 148
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=39.75 E-value=65 Score=21.60 Aligned_cols=31 Identities=16% Similarity=-0.037 Sum_probs=23.3
Q ss_pred HHHHhhHHHHHHhHHhhcc--ceEEEEEeCCCc
Q 033474 12 ILNLEMDEVLSSVAETIKN--FAVIYLVDISEV 42 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~n--fA~IYlvDi~eV 42 (118)
--|.++-..|.+++++.+. =..|+.|++++-
T Consensus 61 ~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~ 93 (165)
T 3s9f_A 61 PPCRGFTPQLVEFYEKHHDSKNFEIILASWDEE 93 (165)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS
T ss_pred hhHHHHHHHHHHHHHHhccCCCeEEEEEecCCC
Confidence 4699999999999998874 345566776654
No 149
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=38.76 E-value=68 Score=19.77 Aligned_cols=30 Identities=7% Similarity=-0.067 Sum_probs=22.6
Q ss_pred HHHHhhHHHHHHhHHhhc-cceEEEEEeCCC
Q 033474 12 ILNLEMDEVLSSVAETIK-NFAVIYLVDISE 41 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~-nfA~IYlvDi~e 41 (118)
-.|..+-..|.+++++.+ .=..++.|+++.
T Consensus 47 ~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 47 PPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 359999999999999887 235566777643
No 150
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=38.37 E-value=18 Score=22.82 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=26.9
Q ss_pred CCcccCchhHHHHHhhHHHHHHhHHhhccc-----eEEEEEeC
Q 033474 2 NATYDTPRRLILNLEMDEVLSSVAETIKNF-----AVIYLVDI 39 (118)
Q Consensus 2 ~~~~~~~~~~~~Cm~mDevL~~~ae~v~nf-----A~IYlvDi 39 (118)
|+-++.-+.+-.+..+|++|..+.+.+.+. +.|++.|-
T Consensus 2 ~~L~~i~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~i~l~d~ 44 (169)
T 3oov_A 2 NAFHQISSRIQKSIDVDEVLRLCAEGLHDVLGYERVNILMADT 44 (169)
T ss_dssp ----CHHHHHHHCCCHHHHHHHHHHHHHHTTCCSEEEEEEECT
T ss_pred chHHHHHHHHhhhcCHHHHHHHHHHHHHHhhCCceEEEEEEeC
Confidence 344566677888888999999999987764 67887774
No 151
>2faf_A Phosphoenolpyruvate carboxykinase; pepck, phosphoryl transfer, lyase; HET: 20S EPE 1PE; 1.70A {Gallus gallus} PDB: 2fah_A* 2qzy_A*
Probab=38.29 E-value=19 Score=32.38 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=25.0
Q ss_pred CChhhHHHHHHHHhhccccCceeEEccC
Q 033474 83 KDKQEFIDIVETVYRGARKGRGLVIAPK 110 (118)
Q Consensus 83 ~~kQefIDIiE~iyRgA~kGkglV~SP~ 110 (118)
-+.+|+-..+...|+|.||||.+-|-|.
T Consensus 104 ~~p~e~~~~l~~~f~G~M~GRTMYViPF 131 (608)
T 2faf_A 104 MSPNAFQAAVQERFPGCMAGRPLYVIPF 131 (608)
T ss_dssp ECHHHHHHHHHHHSTTTTTTSEEEEEEE
T ss_pred CCHHHHHHHHHHhCCcccCCCEEEEEee
Confidence 3678999999999999999999988774
No 152
>2dyy_A UPF0076 protein PH0854; putative translation initiation inhibitor, trimer, structural genomics, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=36.53 E-value=14 Score=25.02 Aligned_cols=37 Identities=16% Similarity=0.467 Sum_probs=25.9
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 56 ~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~ 94 (126)
T 2dyy_A 56 ENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAE 94 (126)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEECC-CCTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHH
Confidence 34666776655455554 67899999999999888764
No 153
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=36.27 E-value=10 Score=25.87 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=27.4
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 44 ~ni~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~ 82 (122)
T 3k12_A 44 ENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQ 82 (122)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHH
Confidence 34677777665555664 67899999999888888864
No 154
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=35.59 E-value=10 Score=26.02 Aligned_cols=37 Identities=22% Similarity=0.423 Sum_probs=27.2
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 46 ~nl~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~ 84 (124)
T 3gtz_A 46 AQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDA 84 (124)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHH
Confidence 34667776655555564 67899999999999988863
No 155
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=33.56 E-value=33 Score=27.66 Aligned_cols=76 Identities=13% Similarity=0.231 Sum_probs=54.6
Q ss_pred HHHHHHhHHhhccceEEEEEeCCCcccccccccc----cCcceEEEEeecceeEEecCCC---------------CCceE
Q 033474 18 DEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL----YDPSTVMFFFRNKHIMIDLGTG---------------NNNKI 78 (118)
Q Consensus 18 DevL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL----~dP~tvMFFfrnkHm~vD~GTg---------------nnnKi 78 (118)
.++..++.+.++++-.++++|.+-++ =++|=+| .+- .++++.+|+-|+.=++.- .++-+
T Consensus 9 ~~~v~el~e~l~~~~~v~vv~~~gl~-v~ql~~LR~~lR~~-~~~~V~KNTL~r~Al~~~~~~~~~le~L~~~L~G~~gl 86 (312)
T 3u5i_q 9 AEYFAKLREYLEEYKSLFVVGVDNVS-SQQMHEVRKELRGR-AVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKGNVGF 86 (312)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECSSCC-HHHHHHHHHHHSSS-CEEEECCHHHHHHHHHTTSSSSCGGGGTGGGCCSSEEE
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCC-HHHHHHHHHHHhcC-ceEEEeehHHHHHHHhhCcccccChHHHHHhccCCEEE
Confidence 35778899999999999999998875 3455555 333 478899999999888761 23445
Q ss_pred EeecCChhhHHHHHHHH
Q 033474 79 NWALKDKQEFIDIVETV 95 (118)
Q Consensus 79 n~~~~~kQefIDIiE~i 95 (118)
-|.-+|..+..++++.-
T Consensus 87 ~Ft~~dp~~v~k~l~~~ 103 (312)
T 3u5i_q 87 VFTNEPLTEIKNVIVSN 103 (312)
T ss_dssp EEESSCHHHHHHHHHTS
T ss_pred EEECCCHHHHHHHHHhc
Confidence 55556767777776643
No 156
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=33.54 E-value=21 Score=24.11 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=14.4
Q ss_pred ChhhHHHHHHHHhhcc
Q 033474 84 DKQEFIDIVETVYRGA 99 (118)
Q Consensus 84 ~kQefIDIiE~iyRgA 99 (118)
+.+|||++|+.|+.+.
T Consensus 11 Te~Efi~lv~~I~~~~ 26 (85)
T 1gxg_A 11 TETEFKKIIEDIINCE 26 (85)
T ss_dssp CHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHhCC
Confidence 6799999999999884
No 157
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=33.43 E-value=98 Score=20.02 Aligned_cols=27 Identities=15% Similarity=0.294 Sum_probs=20.9
Q ss_pred HHHhhHHHHHHhHHhhccceEEEEEeCC
Q 033474 13 LNLEMDEVLSSVAETIKNFAVIYLVDIS 40 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nfA~IYlvDi~ 40 (118)
.|..+-..|.+++++.+++ .|+.|+.+
T Consensus 51 ~C~~~~~~l~~l~~~~~~v-~vv~i~~d 77 (165)
T 3ha9_A 51 SCVYMADLLDRLTEKYREI-SVIAIDFW 77 (165)
T ss_dssp THHHHHHHHHHHHHHCTTE-EEEEEECC
T ss_pred chhhhHHHHHHHHHHcCCc-EEEEEEec
Confidence 4999999999999988854 45566665
No 158
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=33.16 E-value=21 Score=24.19 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=14.8
Q ss_pred CChhhHHHHHHHHhhcc
Q 033474 83 KDKQEFIDIVETVYRGA 99 (118)
Q Consensus 83 ~~kQefIDIiE~iyRgA 99 (118)
-+.+|||++|+.|+.+.
T Consensus 10 yTe~Efi~lv~~I~~~~ 26 (86)
T 1fr2_A 10 YTEAEFLQLVTTICNAD 26 (86)
T ss_dssp SBHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhCC
Confidence 36799999999999884
No 159
>2wvq_A Small S protein; prion-binding protein, prion, prion regulatory domain, heter incompatibility, prion- binding protein; 2.00A {Podospora anserina} PDB: 2wvn_A 2wvo_A
Probab=32.98 E-value=27 Score=26.56 Aligned_cols=24 Identities=38% Similarity=0.554 Sum_probs=20.0
Q ss_pred CCCCceEEeecCChhhHHHHHHHH
Q 033474 72 TGNNNKINWALKDKQEFIDIVETV 95 (118)
Q Consensus 72 TgnnnKin~~~~~kQefIDIiE~i 95 (118)
++--.|+.||+.||..|-.+|+.|
T Consensus 144 ~s~~~r~~Wai~Dk~~F~~LV~~i 167 (225)
T 2wvq_A 144 TSLAKKTAWALYDGKSLEKIVDQV 167 (225)
T ss_dssp CCSCCCCCEEECSHHHHHHHHHHH
T ss_pred CCccceeeeeeechHHHHHHHHHH
Confidence 344479999999999999998875
No 160
>2zmf_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phospho 10A; GAF domain, phosphodiesterase, CGMP-binding, HYD nucleotide-binding, structural genomics; HET: MSE CMP; 2.10A {Homo sapiens}
Probab=32.58 E-value=33 Score=21.96 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=20.7
Q ss_pred HhhHHHHHHhHHhhccc-----eEEEEEeCCC
Q 033474 15 LEMDEVLSSVAETIKNF-----AVIYLVDISE 41 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf-----A~IYlvDi~e 41 (118)
.-+|++|..+.+.+... +.||++|-+.
T Consensus 27 ~dld~ll~~i~~~~~~~l~ad~~~i~l~d~~~ 58 (189)
T 2zmf_A 27 VAIDSLLEHIMIYAKNLVNADRCALFQVDHKN 58 (189)
T ss_dssp SCHHHHHHHHHHHHHHHHTEEEEEEEEEETTT
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEecCC
Confidence 45788888888876654 7899998654
No 161
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=31.92 E-value=1e+02 Score=19.71 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=44.9
Q ss_pred HHHHhhHHHHHHhHHhhcc-ceEEEEEeCCCccc------------------------cccccc--ccCcceEEEEe-ec
Q 033474 12 ILNLEMDEVLSSVAETIKN-FAVIYLVDISEVPD------------------------FNTMYE--LYDPSTVMFFF-RN 63 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~n-fA~IYlvDi~eVpd------------------------fn~mye--L~dP~tvMFFf-rn 63 (118)
--|..+-..|.+++++.++ =..|+.|++++.++ +-+.|. +.--+++ |++ ++
T Consensus 37 ~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~-~lid~~ 115 (151)
T 3raz_A 37 GPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFT-VVEAPK 115 (151)
T ss_dssp HHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEE-EEEETT
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEE-EEECCC
Confidence 3599999999999988743 36677888864332 222333 3222232 444 22
Q ss_pred ceeEEecCCCCCceEEeecCChhhHHHHHHHHhhccccCce
Q 033474 64 KHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRG 104 (118)
Q Consensus 64 kHm~vD~GTgnnnKin~~~~~kQefIDIiE~iyRgA~kGkg 104 (118)
..+ +..-.| ..+.+++.+.|+.+-.+..++.+
T Consensus 116 G~i-~~~~~g--------~~~~~~l~~~l~~l~~~~~~~~~ 147 (151)
T 3raz_A 116 CGY-RQTITG--------EVNEKSLTDAVKLAHSKCREGHH 147 (151)
T ss_dssp TTE-EEECCS--------CCCHHHHHHHHHHHHTC------
T ss_pred CcE-EEEECC--------CCCHHHHHHHHHHHHHHhhcccc
Confidence 222 221122 23578999999999887766543
No 162
>3moe_A Phosphoenolpyruvate carboxykinase, cytosolic [GTP; gluconeogenesis, lyase; HET: GTP SPV 1PE; 1.25A {Rattus norvegicus} PDB: 3mof_A* 3moh_A* 3dtb_A* 2qey_A* 2qf1_A* 2qew_A* 2rk7_A 2rk8_A 2rka_A* 2rkd_A 2rke_A 2qf2_A* 3dt2_A* 3dt7_A* 3dt4_A* 1khb_A* 1khe_A* 1khf_A* 1khg_A 1m51_A* ...
Probab=31.70 E-value=18 Score=32.53 Aligned_cols=27 Identities=22% Similarity=0.507 Sum_probs=24.4
Q ss_pred ChhhHHHHHHHHhhccccCceeEEccC
Q 033474 84 DKQEFIDIVETVYRGARKGRGLVIAPK 110 (118)
Q Consensus 84 ~kQefIDIiE~iyRgA~kGkglV~SP~ 110 (118)
+.+|+-..+...|+|.||||.+-|-|.
T Consensus 120 ~p~e~~~~l~~~f~G~M~GRTMYViPF 146 (624)
T 3moe_A 120 SEEDFEKAFNARFPGCMKGRTMYVIPF 146 (624)
T ss_dssp CHHHHHHHHHTTSTTTTTTSEEEEEEE
T ss_pred CHHHHHHHHHhhCcccccCCeEEEEee
Confidence 568999999999999999999998774
No 163
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=31.60 E-value=13 Score=25.28 Aligned_cols=37 Identities=11% Similarity=0.387 Sum_probs=27.1
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|+++.+.+|+.|.=
T Consensus 55 ~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~ 93 (128)
T 1qu9_A 55 DNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEA 93 (128)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHH
Confidence 45667777665555665 67899999988888887764
No 164
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=31.09 E-value=1.2e+02 Score=20.16 Aligned_cols=29 Identities=7% Similarity=0.133 Sum_probs=23.4
Q ss_pred HHHhhHHHHHHhHHhhccc-e------EEEEEeCCC
Q 033474 13 LNLEMDEVLSSVAETIKNF-A------VIYLVDISE 41 (118)
Q Consensus 13 ~Cm~mDevL~~~ae~v~nf-A------~IYlvDi~e 41 (118)
.|..+-..|.+++++.++- . .|+.|+.++
T Consensus 73 ~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 73 PCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred hHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 5999999999999988775 4 778888876
No 165
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=30.89 E-value=23 Score=24.23 Aligned_cols=17 Identities=12% Similarity=0.417 Sum_probs=15.0
Q ss_pred CChhhHHHHHHHHhhcc
Q 033474 83 KDKQEFIDIVETVYRGA 99 (118)
Q Consensus 83 ~~kQefIDIiE~iyRgA 99 (118)
-+++|||++|+.||.+.
T Consensus 10 YTE~EFl~fv~~i~~~~ 26 (87)
T 1unk_A 10 YTEAEFVQLLKEIEKEN 26 (87)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCC
Confidence 46899999999999885
No 166
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=30.74 E-value=1e+02 Score=19.44 Aligned_cols=31 Identities=13% Similarity=-0.053 Sum_probs=24.2
Q ss_pred HHHHhhHHHHHHhHHhhcc-ceEEEEEeCCCc
Q 033474 12 ILNLEMDEVLSSVAETIKN-FAVIYLVDISEV 42 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~n-fA~IYlvDi~eV 42 (118)
-.|..+-..|.+++++.++ =..++.|+++.-
T Consensus 41 ~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~ 72 (154)
T 3kcm_A 41 PPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG 72 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc
Confidence 3799999999999998876 356677787763
No 167
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=30.57 E-value=17 Score=24.60 Aligned_cols=38 Identities=16% Similarity=0.424 Sum_probs=27.0
Q ss_pred HHhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 14 NLEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 14 Cm~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
...++.+|.+.--.+++. ..+|+.|++..+.+|+.|.-
T Consensus 53 l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~ 92 (124)
T 1qd9_A 53 FSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQ 92 (124)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHH
Confidence 345667777655455555 57899999888888887764
No 168
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=30.29 E-value=14 Score=25.63 Aligned_cols=37 Identities=24% Similarity=0.484 Sum_probs=27.1
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 52 ~nl~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~ 90 (128)
T 3kjj_A 52 AQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDA 90 (128)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHH
Confidence 34667777665555554 67899999998888888863
No 169
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=30.26 E-value=27 Score=26.41 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=54.8
Q ss_pred HHHHHhHHhhccceEEEEEeCCCcccccccccc----cCcceEEEEeecceeEEecCCC-----------------CCce
Q 033474 19 EVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL----YDPSTVMFFFRNKHIMIDLGTG-----------------NNNK 77 (118)
Q Consensus 19 evL~~~ae~v~nfA~IYlvDi~eVpdfn~myeL----~dP~tvMFFfrnkHm~vD~GTg-----------------nnnK 77 (118)
++..++.+.++++..++++|.+-++. ++|=+| .+ .+.+++.+|+-|+.=++.- .++-
T Consensus 7 ~~v~el~e~l~~~~~v~v~~~~gl~~-~ql~~lR~~lr~-~~~~~v~KNtL~r~Al~~~~~~e~~~~~~~L~~~l~G~~~ 84 (213)
T 3jsy_A 7 EEVKTLKGLIKSKPVVAIVDMMDVPA-PQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAA 84 (213)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCSCCH-HHHHHHHHHHTT-TEEEEECCHHHHHHHHHHHHHHTTCGGGGGGGGGCCSSEE
T ss_pred HHHHHHHHHHHhCCEEEEEEcCCCCH-HHHHHHHHHHhC-CCEEEEEeHHHHHHHHhhchhhhcccchhHHHHhCcCCeE
Confidence 56788999999999999999887643 334344 33 3578999999998776632 2455
Q ss_pred EEeecCChhhHHHHHHHH
Q 033474 78 INWALKDKQEFIDIVETV 95 (118)
Q Consensus 78 in~~~~~kQefIDIiE~i 95 (118)
+-|.-+|..+..++++.-
T Consensus 85 l~Ft~~dp~~v~k~l~~~ 102 (213)
T 3jsy_A 85 ILVTDMNPFKLYKLLEEN 102 (213)
T ss_dssp EEEESSCHHHHHHHHHHS
T ss_pred EEEeCCCHHHHHHHHHHc
Confidence 666667888888888764
No 170
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=29.23 E-value=15 Score=25.41 Aligned_cols=37 Identities=22% Similarity=0.441 Sum_probs=26.0
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 59 ~ni~~~L~~aG~~l~~vvk~~vyl~d~~d~~~~n~~~~~ 97 (136)
T 1qah_A 59 KNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKT 97 (136)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEccCccHHHHHHHHHH
Confidence 34566666654455555 67899999888888887763
No 171
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=29.11 E-value=38 Score=20.91 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=28.8
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcc-------cccccccccCcceEEEEeecce
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVP-------DFNTMYELYDPSTVMFFFRNKH 65 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVp-------dfn~myeL~dP~tvMFFfrnkH 65 (118)
+--|.++-.+|.+.+.+ | ..+|++.-+ ++.+.|.+..-+|+ |.++++
T Consensus 30 C~~C~~~~~~l~~~~~~---~---~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 30 CGYCNRVKQLLTQVGAS---Y---KVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp CHHHHHHHHHHHHHTCC---C---EEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred ChhHHHHHHHHHHcCCC---e---EEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 45699999988888764 3 235554433 46677777554564 444444
No 172
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=29.03 E-value=19 Score=24.31 Aligned_cols=38 Identities=21% Similarity=0.487 Sum_probs=27.0
Q ss_pred HHhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 14 NLEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 14 Cm~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
...++.+|.+..-.+++. ..+|+.|+++.+.+|+.|.=
T Consensus 53 l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~~~~~~~ 92 (124)
T 2cvl_A 53 MENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVYAR 92 (124)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHH
Confidence 345667777655455555 67899999888888887763
No 173
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=28.93 E-value=34 Score=20.25 Aligned_cols=50 Identities=4% Similarity=0.038 Sum_probs=28.3
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCC---CcccccccccccCcceEEEEeecc
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDIS---EVPDFNTMYELYDPSTVMFFFRNK 64 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~---eVpdfn~myeL~dP~tvMFFfrnk 64 (118)
.--|.++-.+|.+++++.. ..+-.+|++ +-++..+-|....-+|+ |++++
T Consensus 12 C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~gv~~vPt~--~i~g~ 64 (80)
T 2k8s_A 12 CPVCVSAEQAVANAIDPSK--YTVEIVHLGTDKARIAEAEKAGVKSVPAL--VIDGA 64 (80)
T ss_dssp CHHHHHHHHHHHHHSCTTT--EEEEEEETTTCSSTHHHHHHHTCCEEEEE--EETTE
T ss_pred CCchHHHHHHHHHHHHhcC--CeEEEEEecCChhhHHHHHHcCCCcCCEE--EECCE
Confidence 3469999998888876532 223455555 34554555555443453 33554
No 174
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=28.82 E-value=16 Score=24.96 Aligned_cols=37 Identities=22% Similarity=0.495 Sum_probs=26.1
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 58 ~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~n~~~~~ 96 (128)
T 1x25_A 58 DNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAE 96 (128)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHEEEEEEEECCHHHHHHHHHHHHH
Confidence 34666666655455554 56899999888888887764
No 175
>3i7t_A RV2704, putative uncharacterized protein; siras, YJGF/YER057C/UK114, homotrimer, quick SOAK NAI deriva unknown function; 1.93A {Mycobacterium tuberculosis}
Probab=28.75 E-value=16 Score=26.31 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=27.3
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|...--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 50 ~ni~aiL~~aG~~l~dVvk~tvyl~d~~df~~~n~v~~~ 88 (149)
T 3i7t_A 50 RRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQ 88 (149)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHhHEEEEEEEECCHHHHHHHHHHHHH
Confidence 35667776665556665 78899999988888887763
No 176
>3m1x_A Putative endoribonuclease L-PSP; structural genomics, seattle structural genomics center for infectious disease, ssgcid, unknown function; HET: FLC; 1.20A {Entamoeba histolytica} PDB: 3m4s_A 3mqw_A*
Probab=28.48 E-value=16 Score=25.99 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=25.0
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYE 50 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~mye 50 (118)
.++.+|...--.+++. ..+|+.|++..+.+|+.|.
T Consensus 80 nl~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~ 116 (148)
T 3m1x_A 80 NLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYA 116 (148)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHH
Confidence 4566666554455554 6789999998888887775
No 177
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=28.02 E-value=18 Score=24.58 Aligned_cols=36 Identities=19% Similarity=0.481 Sum_probs=25.2
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
.++.+|.+..-.+++. ..+|+.|+++.+.+|+.|.=
T Consensus 56 ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~v~~~ 93 (125)
T 3l7q_A 56 NISAILTEAGTDFDHVVKTTCFLSDIDDFVPFNEVYAT 93 (125)
T ss_dssp HHHHHHHHHTCCGGGEEEEEEEESCGGGHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHH
Confidence 4556666554445554 67899999988888877753
No 178
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=27.15 E-value=1.1e+02 Score=19.92 Aligned_cols=24 Identities=8% Similarity=0.025 Sum_probs=17.3
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEe
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVD 38 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvD 38 (118)
-.|..+-..|.+++++ ++.+ +.|+
T Consensus 64 ~~C~~~~~~l~~l~~~--~v~v-v~v~ 87 (168)
T 2b1k_A 64 PTCRAEHQYLNQLSAQ--GIRV-VGMN 87 (168)
T ss_dssp HHHHHHHHHHHHHHHT--TCCE-EEEE
T ss_pred HHHHHHHHHHHHHHHC--CCEE-EEEE
Confidence 3599998899998886 5544 4445
No 179
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=26.96 E-value=1.2e+02 Score=19.15 Aligned_cols=30 Identities=7% Similarity=-0.043 Sum_probs=23.1
Q ss_pred HHHHhhHHHHHHhHHhhc--cceEEEEEeCCC
Q 033474 12 ILNLEMDEVLSSVAETIK--NFAVIYLVDISE 41 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~--nfA~IYlvDi~e 41 (118)
-.|..+-..|.+++++.+ +-..|+.|++++
T Consensus 41 ~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~ 72 (146)
T 1o8x_A 41 PPARGFTPQLIEFYDKFHESKNFEVVFCTWDE 72 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC
Confidence 469999999999999887 345566777765
No 180
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=26.82 E-value=18 Score=24.93 Aligned_cols=37 Identities=16% Similarity=0.368 Sum_probs=26.2
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 63 ~nl~~~L~~aG~~l~~vvk~~vyl~d~~~f~~~n~v~~~ 101 (134)
T 3v4d_A 63 ETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAE 101 (134)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHH
Confidence 34666666655555664 77899999988888877753
No 181
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=26.79 E-value=18 Score=24.49 Aligned_cols=37 Identities=16% Similarity=0.358 Sum_probs=26.0
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|...--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 58 ~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~~~v~~~ 96 (127)
T 3r0p_A 58 KNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQ 96 (127)
T ss_dssp HHHHHHHHHTTSCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHEEEEEEEEcCHHHHHHHHHHHHH
Confidence 45566666655455554 67899999988888877753
No 182
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=26.68 E-value=17 Score=24.50 Aligned_cols=37 Identities=19% Similarity=0.517 Sum_probs=26.1
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 50 ~ni~~~L~~ag~~l~~vvk~~vyl~d~~df~~~n~~~~~ 88 (123)
T 2cwj_A 50 DNLKAIVEGAGYSMDDIVKVTVYITDISRFSEFNEVYRE 88 (123)
T ss_dssp HHHHHHHHHTSCCGGGCCEEEEEESSSSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHeEEEEEEEcCHHHHHHHHHHHHH
Confidence 34666666654445554 67899999888888887763
No 183
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=26.66 E-value=18 Score=24.67 Aligned_cols=36 Identities=25% Similarity=0.574 Sum_probs=25.5
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYE 50 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~mye 50 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.
T Consensus 58 ~ni~~~L~~aG~~~~~vvk~~vyl~d~~d~~~~n~~~~ 95 (129)
T 1jd1_A 58 QNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYA 95 (129)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEEEEEcChHHHHHHHHHHH
Confidence 34566666654445555 6789999988888888776
No 184
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=26.40 E-value=16 Score=26.20 Aligned_cols=36 Identities=14% Similarity=0.367 Sum_probs=25.8
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYE 50 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~mye 50 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.
T Consensus 79 ~nl~a~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~ 116 (153)
T 3vcz_A 79 DNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYG 116 (153)
T ss_dssp HHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHH
Confidence 34566666655555554 7789999998888887775
No 185
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=26.33 E-value=18 Score=26.01 Aligned_cols=37 Identities=14% Similarity=0.430 Sum_probs=26.2
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
..++.+|...--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 87 ~ni~~iL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~ 125 (156)
T 1xrg_A 87 ENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAK 125 (156)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHEEEEEEEECChHHHHHHHHHHHH
Confidence 34566666654445554 67899999988888887764
No 186
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=26.17 E-value=16 Score=25.17 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=24.8
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
.++.+|.+.--.+++. ..+|+.|+++.+.+|+.|.=
T Consensus 48 ni~~~L~~aG~~l~~Vvk~~vyl~d~~df~~~n~v~~~ 85 (126)
T 2ewc_A 48 EMERRLALVGLTLDAVVQMDCLFRDVWNIPVMEKMIKE 85 (126)
T ss_dssp HHHHHHHTTTCCGGGEEEEEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEEEEECChhHHHHHHHHHHH
Confidence 3555665544445554 67899999888888887763
No 187
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=25.62 E-value=33 Score=23.67 Aligned_cols=17 Identities=24% Similarity=0.559 Sum_probs=14.5
Q ss_pred CChhhHHHHHHHHhhcc
Q 033474 83 KDKQEFIDIVETVYRGA 99 (118)
Q Consensus 83 ~~kQefIDIiE~iyRgA 99 (118)
-+.+|||++|+.|+.+.
T Consensus 10 yTe~Efi~lv~~I~~~~ 26 (94)
T 3u43_A 10 YTEAEFLEFVKKICRAE 26 (94)
T ss_dssp SBHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHhcC
Confidence 36799999999999864
No 188
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=25.29 E-value=26 Score=27.68 Aligned_cols=63 Identities=5% Similarity=-0.008 Sum_probs=40.4
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeC----CCcccccccccccCcceEEEEeecceeEEecCCCCCceEEeecCChhh
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDI----SEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 87 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi----~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTgnnnKin~~~~~kQe 87 (118)
--|.++-.++.+.|++++ ..-||. ++-|+..+-|.+.--+| +|.++++ +.+ ..++++
T Consensus 210 ~~Ck~l~p~le~lA~~l~----~Vd~d~~d~~~~~~~la~~~gI~~vPT--~~i~G~~------------~~G-~~~~~~ 270 (291)
T 3kp9_A 210 PHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQECTEAGITSYPT--WIINGRT------------YTG-VRSLEA 270 (291)
T ss_dssp HHHHHHHHHHGGGGGGSC----EEESCSSCSSSCCCHHHHTTTCCSTTE--EEETTEE------------EES-CCCHHH
T ss_pred HHHHHHHHHHHHHHHHcC----EEEEeecCchhhHHHHHHHcCCcccCe--EEECCEE------------ecC-CCCHHH
Confidence 469999999999998764 122331 23677778888877666 4445542 333 346677
Q ss_pred HHHHHH
Q 033474 88 FIDIVE 93 (118)
Q Consensus 88 fIDIiE 93 (118)
+.+.++
T Consensus 271 L~~~l~ 276 (291)
T 3kp9_A 271 LAVASG 276 (291)
T ss_dssp HHHHTC
T ss_pred HHHHHC
Confidence 776654
No 189
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=25.26 E-value=20 Score=25.88 Aligned_cols=36 Identities=19% Similarity=0.578 Sum_probs=25.6
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYE 50 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~mye 50 (118)
..++.+|.+.--.+++. ..+|+.|+++.+.+|+.|.
T Consensus 82 ~Ni~a~L~~aG~~l~dVVkvtvyl~d~~df~~~n~v~~ 119 (153)
T 3quw_A 82 QNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYA 119 (153)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHH
Confidence 34566666655555554 6789999988888887775
No 190
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=24.66 E-value=33 Score=24.21 Aligned_cols=18 Identities=11% Similarity=0.320 Sum_probs=15.4
Q ss_pred cCChhhHHHHHHHHhhcc
Q 033474 82 LKDKQEFIDIVETVYRGA 99 (118)
Q Consensus 82 ~~~kQefIDIiE~iyRgA 99 (118)
=-+++|||++|+.|+...
T Consensus 16 DYTE~EFi~lv~~I~~~~ 33 (101)
T 2k0d_X 16 DYTEAEFVQLLKEIEKEN 33 (101)
T ss_dssp GCBHHHHHHHHHHHHHHH
T ss_pred HhcHHHHHHHHHHHHhcC
Confidence 457899999999999874
No 191
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=24.52 E-value=21 Score=25.14 Aligned_cols=36 Identities=11% Similarity=0.314 Sum_probs=25.5
Q ss_pred HhhHHHHHHhHHhhccc--eEEEEEeCCCccccccccc
Q 033474 15 LEMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYE 50 (118)
Q Consensus 15 m~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~mye 50 (118)
..++.+|.+.--.+++. ..+|+.|++..+.+|+.|.
T Consensus 68 ~ni~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~ 105 (140)
T 2b33_A 68 ENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYS 105 (140)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEECCchhHHHHHHHHH
Confidence 34566666655445554 6789999988888887775
No 192
>2ig8_A Hypothetical protein PA3499; structural genomics, PSI-2, Pro structure initiative; 1.90A {Pseudomonas aeruginosa}
Probab=24.17 E-value=21 Score=24.75 Aligned_cols=36 Identities=11% Similarity=0.274 Sum_probs=25.1
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
.++.+|.+.--.+++. ..+|+.|++..+.+|+.|.=
T Consensus 63 ni~~~L~~aG~~l~~vvk~~vyl~d~~df~~~~~v~~~ 100 (144)
T 2ig8_A 63 KVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQE 100 (144)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEEEEECChHHHHHHHHHHHH
Confidence 4556666554445554 67899999888888887763
No 193
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=24.06 E-value=1.6e+02 Score=19.51 Aligned_cols=28 Identities=11% Similarity=-0.052 Sum_probs=20.9
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeC
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDI 39 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi 39 (118)
-.|.++-..|.+++++.++-..|+.|+.
T Consensus 46 ~~C~~~~~~l~~l~~~~~~~~~~v~v~~ 73 (188)
T 2cvb_A 46 PYVKGSIGELVALAERYRGKVAFVGINA 73 (188)
T ss_dssp HHHHTTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred ccHHHHHHHHHHHHHHhhcCeEEEEEEc
Confidence 3588888888888888766466677776
No 194
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls}
Probab=23.89 E-value=61 Score=20.69 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=25.3
Q ss_pred hhHHHHHhhHHHHHHhHHhhccc-----eEEEEEeCCC
Q 033474 9 RRLILNLEMDEVLSSVAETIKNF-----AVIYLVDISE 41 (118)
Q Consensus 9 ~~~~~Cm~mDevL~~~ae~v~nf-----A~IYlvDi~e 41 (118)
+.+..+..+|++|..+++.+.+. +.|+++|-+.
T Consensus 13 ~~l~~~~d~~~~l~~i~~~~~~~~~~~~~~i~l~d~~~ 50 (177)
T 3k2n_A 13 DAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRER 50 (177)
T ss_dssp HHHTTCCSHHHHHHHHHHHHTTTCCCSEEEEEEEETTT
T ss_pred HHHhcccCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC
Confidence 44556678899999999988765 7789998543
No 195
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=23.75 E-value=23 Score=25.00 Aligned_cols=36 Identities=17% Similarity=0.360 Sum_probs=25.2
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
.++.+|.+..-.+++. ..+|+.|++..+.+|+.|.=
T Consensus 74 ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~ 111 (143)
T 3k0t_A 74 NLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGS 111 (143)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTT
T ss_pred HHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHH
Confidence 4566666655455554 67899999888888877753
No 196
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=23.54 E-value=20 Score=24.48 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=25.1
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeC-CCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDI-SEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi-~eVpdfn~myeL 51 (118)
.++.+|.+.--.+++. ..+|+.|+ +..+.+|+.|.=
T Consensus 59 ni~~~L~~aG~~~~~vvk~~vyl~d~~~~~~~~~~~~~~ 97 (131)
T 1pf5_A 59 NLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNE 97 (131)
T ss_dssp HHHHHHHTTTCCGGGEEEEEEEESSGGGTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEEEEEcCcHHhHHHHHHHHHH
Confidence 4556666554445554 67899999 888888887763
No 197
>3i3f_A Hypothetical protein; structural genomics, niaid, decode, infectious seattle structural genomics center for infectious disease, unknown function; 1.35A {Giardia lamblia}
Probab=22.84 E-value=26 Score=24.36 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=24.6
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCC---Cccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDIS---EVPDFNTMYE 50 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~---eVpdfn~mye 50 (118)
.++.+|.+.--.+++. ..+|+.|++ ..+.+|+.|.
T Consensus 67 nl~~~L~~aG~~~~~Vvk~~vyl~d~~~~~df~~~n~v~~ 106 (141)
T 3i3f_A 67 NIRKCLEYANSGLDYIVSLNIFLSTSLSDSEEARFNELYR 106 (141)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEEEEEcCCccccCHHHHHHHHH
Confidence 4556666554445554 678999999 8888887775
No 198
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=22.35 E-value=1.5e+02 Score=18.57 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=18.4
Q ss_pred HHHHhhHHHHHHhHHhhccceEEEEEeC
Q 033474 12 ILNLEMDEVLSSVAETIKNFAVIYLVDI 39 (118)
Q Consensus 12 ~~Cm~mDevL~~~ae~v~nfA~IYlvDi 39 (118)
-.|.++-..|.+++++ .++.. +.|+.
T Consensus 55 ~~C~~~~~~l~~l~~~-~~v~~-v~v~~ 80 (156)
T 1kng_A 55 VPCHDEAPLLTELGKD-KRFQL-VGINY 80 (156)
T ss_dssp HHHHHHHHHHHHHTTC-TTSEE-EEEEE
T ss_pred HhHHHHHHHHHHHHhc-CCeEE-EEEEC
Confidence 4599999999999887 44544 45554
No 199
>3lyb_A Putative endoribonuclease; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.66A {Klebsiella pneumoniae}
Probab=21.94 E-value=26 Score=25.36 Aligned_cols=36 Identities=14% Similarity=0.393 Sum_probs=25.5
Q ss_pred hhHHHHHHhHHhhccc--eEEEEEeCCCcccccccccc
Q 033474 16 EMDEVLSSVAETIKNF--AVIYLVDISEVPDFNTMYEL 51 (118)
Q Consensus 16 ~mDevL~~~ae~v~nf--A~IYlvDi~eVpdfn~myeL 51 (118)
.++.+|...--.+++. ..+|+.|++..+.+|+.|.-
T Consensus 79 Ni~aiL~~aG~~l~~Vvkvtvyl~d~~df~~~n~v~~~ 116 (165)
T 3lyb_A 79 SIRRTVASAGGQMSDVIKLVQYFRNLDHFPYYSRVRKL 116 (165)
T ss_dssp HHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhcCChhHhEEEEEEECCHHHhHHHHHHHHH
Confidence 4556665554445554 78899999988888888764
No 200
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=21.53 E-value=66 Score=19.63 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=30.0
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcc-------cccccccccCcceEEEEeeccee
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVP-------DFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVp-------dfn~myeL~dP~tvMFFfrnkHm 66 (118)
+-.|.++-.+|.+.+.+-.+ +..+|+++-| ++.+.+....-++ +|.+++++
T Consensus 22 C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~--i~~~g~~i 79 (105)
T 1kte_A 22 CPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPR--VFIGKECI 79 (105)
T ss_dssp CHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCE--EEETTEEE
T ss_pred CHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCe--EEECCEEE
Confidence 34688888888877654333 4456877653 2444455444345 35566654
No 201
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=21.34 E-value=48 Score=21.19 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=30.3
Q ss_pred HHHHHhhHHHHHHhHHhhccceEEEEEeCCCcc-------cccccccccCcceEEEEeeccee
Q 033474 11 LILNLEMDEVLSSVAETIKNFAVIYLVDISEVP-------DFNTMYELYDPSTVMFFFRNKHI 66 (118)
Q Consensus 11 ~~~Cm~mDevL~~~ae~v~nfA~IYlvDi~eVp-------dfn~myeL~dP~tvMFFfrnkHm 66 (118)
.--|.++-.+|.+.+..-.+ +..+|+++-| ++.+.+....-+++ |++++++
T Consensus 29 Cp~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v--~i~g~~i 86 (114)
T 2hze_A 29 CPFCRNALDILNKFSFKRGA---YEIVDIKEFKPENELRDYFEQITGGKTVPRI--FFGKTSI 86 (114)
T ss_dssp CHHHHHHHHHHTTSCBCTTS---EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE--EETTEEE
T ss_pred ChhHHHHHHHHHHcCCCcCc---eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 45688888888765543111 5668888765 45555555443353 5566653
No 202
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=20.97 E-value=43 Score=24.36 Aligned_cols=18 Identities=33% Similarity=0.665 Sum_probs=14.9
Q ss_pred HHhhccccCceeEEccCC
Q 033474 94 TVYRGARKGRGLVIAPKD 111 (118)
Q Consensus 94 ~iyRgA~kGkglV~SP~d 111 (118)
.+|.+.+-|.|+.++|.+
T Consensus 27 ~vf~~~~~G~Giai~p~~ 44 (154)
T 2gpr_A 27 EVFKERMLGDGFAINPKS 44 (154)
T ss_dssp HHHHTTSSCEEEEEEESS
T ss_pred ccccccceeCeEEEEeCC
Confidence 368888889999988876
No 203
>1v5r_A Growth-arrest-specific protein 2; GAS2 domain, zinc binding domain, apoptosis, cell cycle, structural genomics; NMR {Mus musculus} SCOP: d.82.4.1
Probab=20.96 E-value=57 Score=22.90 Aligned_cols=50 Identities=26% Similarity=0.496 Sum_probs=30.1
Q ss_pred hhHHHHHHhHHh--hc---cceEEEEEeCCCcccccccccccCcceEEEEeecceeEEecCCC
Q 033474 16 EMDEVLSSVAET--IK---NFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTG 73 (118)
Q Consensus 16 ~mDevL~~~ae~--v~---nfA~IYlvDi~eVpdfn~myeL~dP~tvMFFfrnkHm~vD~GTg 73 (118)
.+|+...+++++ .+ +|.+..+ + .--|.+-|-.-.+=..|++|+||-.|.|
T Consensus 9 ~LD~~V~~iv~~~~c~c~~~~~v~rv------~--eGkYr~G~k~i~vRil~~~~vMVRVGGG 63 (97)
T 1v5r_A 9 LLDDAVKRISEDPPCKCPTKFCVERL------S--QGRYRVGEKILFIRMLHNKHVMVRVGGG 63 (97)
T ss_dssp HHHHHHHHHHTSSCCCSSSCCCEEEE------E--TTEEEETTEEEEEEEETTTEEEEEETTE
T ss_pred hHHHHHHHHhcCCCccccCCCceEEe------C--CCcEEeCCeEEEEEEecCCEEEEEeCCc
Confidence 467777777764 22 4554432 1 2346666632222234779999999998
Done!