BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033475
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/101 (97%), Positives = 100/101 (99%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV
Sbjct: 61 HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVV 101
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/101 (97%), Positives = 100/101 (99%), Gaps = 1/101 (0%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
MTLGSG SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 59
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
HEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV
Sbjct: 60 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVV 100
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 86/99 (86%)
Query: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
+GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +E
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 63 GRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
G+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVV 99
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 87/99 (87%)
Query: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
+ S + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +E
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 63 GRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
G+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVV
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVV 99
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 69
+PRNF LLEELE GEK GDGT+SYG++ DDI + SW GTIIGP NT + R Y LK
Sbjct: 2 TTIPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLK 61
Query: 70 LFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
L+CDKDYP KPP+VRF ++IN+ CVN + GVV
Sbjct: 62 LYCDKDYPNKPPTVRFTTKINIGCVNQQNGVV 93
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 74/98 (75%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV
Sbjct: 63 RIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVV 100
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 72/98 (73%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
RIY LK+ C YPE PP VRF ++INM VN GVV
Sbjct: 63 RIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 72/98 (73%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
RIY LK+ C YPE PP VRF ++INM VN GVV
Sbjct: 63 RIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 6 GGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRI 65
GS+V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RI
Sbjct: 2 AGSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRI 61
Query: 66 YQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
Y LK+ C YPE PP+VRF ++INM +N+ G+V
Sbjct: 62 YSLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMV 97
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%)
Query: 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR 64
+ + V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E R
Sbjct: 2 AATTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENR 61
Query: 65 IYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
IY LK+ C YPE PP VRF ++INM VN GVV
Sbjct: 62 IYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 98
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C YPE PPSVRF ++INM +N+ +G+V
Sbjct: 65 LKVECGSKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C YPE PPSVRF ++INM +N+ +G+V
Sbjct: 65 LKVECGSKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C YPE PPSVRF ++INM +N+ +G+V
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C YPE PPSVRF ++INM +N+ +G+V
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C YPE PPSVRF ++INM +N+ +G+V
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 70/95 (73%)
Query: 7 GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 66
GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY
Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIY 65
Query: 67 QLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
LK+ C PE PP VRF ++INM VN GVV
Sbjct: 66 SLKIECGPKCPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%)
Query: 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR 64
+ S V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E R
Sbjct: 2 AASSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENR 61
Query: 65 IYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
IY LK+ C YPE PP+VRF ++I+M +N+ G+V
Sbjct: 62 IYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMV 98
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ + VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 AGIKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
L+L C YPE PP+VRF +++NM +N+ G V
Sbjct: 65 LRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTV 98
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 68/90 (75%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
VPRNF+LLEELE+GEKG+G+ + SYG+ + DDI + W TI+GP ++VHE RIY LK+
Sbjct: 4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIH 63
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
CD +YP+ PP V F SRIN+ V+ ETG V
Sbjct: 64 CDANYPDAPPIVTFVSRINLPGVDGETGKV 93
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
VPRNFRLLEELE+GEKG G + SYG+ D DDI M W GTI+GP ++ HE RIY L +
Sbjct: 4 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSID 63
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
C +YP+ PP V F S+IN+ CVN TG V
Sbjct: 64 CGPNYPDSPPKVTFISKINLPCVNPTTGEV 93
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 8 SSVVVPRNFRLLE-ELERGEKGIGDGTVSYGMD-----DGDDIYMRSWTGTIIGPHNTVH 61
S V + +N +LL +R +K + D T+ + GD+IY W TI+GP +V+
Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIY--EWRSTILGPPGSVY 91
Query: 62 EGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVLFLFDLN 108
EG ++ L + +YP KPP V F +RI +N + + L + N
Sbjct: 92 EGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN 138
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 8 SSVVVPRNFRLLE-ELERGEKGIGDGTVSYGMD-----DGDDIYMRSWTGTIIGPHNTVH 61
S V + +N +LL +R +K + D T+ + GD+IY W TI+GP +V+
Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIY--EWRSTILGPPGSVY 91
Query: 62 EGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVLFLFDLN 108
EG ++ L + +YP KPP V F +RI +N + + L + N
Sbjct: 92 EGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN 138
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCD 73
R F+ +E++R + + D + DD + + WT I GP T +EG ++QL
Sbjct: 7 RLFKEYKEVQR--EKVADPDIQLICDDTN---IFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 74 KDYPEKPPSVRFHSRINMTCVNHETGVV 101
+ YP +PP VRF ++I V+ +TG +
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=UBC2 PE=3 SV=1
Length = 168
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D + SW IIGP +T E ++L L
Sbjct: 3 TPAKRRLMRDFKRMQQDAPSGVSASPLPDN----VMSWNAVIIGPADTPFEDGTFRLILQ 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
D+ YP KPPSV+F S +
Sbjct: 59 FDEQYPNKPPSVKFISEM 76
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + +
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVI 138
Query: 101 VLFLFDLN 108
L + N
Sbjct: 139 CLDILKDN 146
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + +
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVI 138
Query: 101 VLFLFDLN 108
L + N
Sbjct: 139 CLDILKDN 146
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + +
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144
Query: 101 VLFLFDLN 108
L + N
Sbjct: 145 CLDILKDN 152
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + +
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144
Query: 101 VLFLFDLN 108
L + N
Sbjct: 145 CLDILKDN 152
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + +
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144
Query: 101 VLFLFDLN 108
L + N
Sbjct: 145 CLDILKDN 152
>sp|P34477|UBC7_CAEEL Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis
elegans GN=ubc-7 PE=1 SV=1
Length = 164
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94
S G+ D +DIY W +IGP +T++EG ++ L +DYP+KPP ++F S I +
Sbjct: 24 SAGLVDDNDIY--KWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNI 81
Query: 95 NHETGVVLFLF 105
+ E V + +
Sbjct: 82 DKEGNVCISIL 92
>sp|Q54XS6|UBE2C_DICDI Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium
discoideum GN=ube2c PE=3 SV=1
Length = 153
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 17 RLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDY 76
RL EL G G ++ DGD+I+ +W GTI G +TV+E +++ L DY
Sbjct: 10 RLQSELMNLMMGPSPGISAFP--DGDNIF--NWIGTIQGAKDTVYEQMEFKMSLKFPTDY 65
Query: 77 PEKPPSVRFHSRINMTCVNHETGVVL 102
P KPP+V+F ++ V++ + L
Sbjct: 66 PYKPPTVKFETQCFHPNVDNNGNICL 91
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD++Y W TI+GP +V+EG ++ L + +YP KPP V F +RI +N + +
Sbjct: 112 GDNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVI 169
Query: 101 VLFLFDLN 108
L + N
Sbjct: 170 CLDILKDN 177
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G G ++I + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
+DYP KPP+VRF SR+
Sbjct: 59 FSEDYPNKPPTVRFVSRM 76
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
+DYP KPP+VRF SR+
Sbjct: 59 FSEDYPNKPPTVRFVSRM 76
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D + W IIGP +T +E ++L L
Sbjct: 3 TPARRRLMRDFKRMKEDSPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
D+DYP KPP V+F S +
Sbjct: 59 FDEDYPNKPPHVKFLSEM 76
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 3 TPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIE 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVL 102
++YP KPP+VRF S++ V + G+ L
Sbjct: 59 FTEEYPNKPPTVRFVSKVFHPNVYADGGICL 89
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
GD++Y W TIIGP T +EG I+ L + DYP KPP + F +RI
Sbjct: 62 GDNLY--HWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRI 108
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D + W IIGP +T E ++L L
Sbjct: 3 TPARRRLMRDFKRMQQDPPSGVSASPLPDN----VMKWNAVIIGPSDTPFEDGTFRLLLS 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
D+ YP KPP V+F S +
Sbjct: 59 FDEQYPNKPPQVKFISEM 76
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 69
+ P RL+ + +R +K G D+ + W I GP +T +G ++L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNN----IMHWNALIFGPEDTPWDGGTFKLT 56
Query: 70 LFCDKDYPEKPPSVRFHSRI 89
L +DYP KPP VRF SR+
Sbjct: 57 LHFTEDYPNKPPIVRFVSRM 76
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 17 RLLEELE----RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
RL +EL G+ GI DGD+++ W T+ GP +TV+E Y+L L
Sbjct: 34 RLQQELRTLLMSGDPGIT------AFPDGDNLF--KWVATLDGPKDTVYESLKYKLTLEF 85
Query: 73 DKDYPEKPPSVRFHSRINMTCVNHETGVVLFLFDLN 108
DYP KPP V+F + V+ + L + N
Sbjct: 86 PSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKEN 121
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSI 84
Query: 101 VL 102
L
Sbjct: 85 CL 86
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R + G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQHDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
+DYP KPP+VRF SR+
Sbjct: 59 FSEDYPNKPPTVRFVSRM 76
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2
PE=1 SV=1
Length = 152
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGISGAPHDNN----ITLWNAVIFGPDDTPWDGGTFKLTLQ 58
Query: 72 CDKDYPEKPPSVRFHSRI 89
+DYP KPP+VRF SR+
Sbjct: 59 FTEDYPNKPPTVRFVSRM 76
>sp|Q4R5Y8|UB2G1_MACFA Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis
GN=UBE2G1 PE=2 SV=1
Length = 170
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
S G+ D +D+Y W IIGP +T++EG +++ L KDYP +PP ++F + I
Sbjct: 26 SAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 78
>sp|P62255|UB2G1_RAT Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1
PE=2 SV=3
Length = 170
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
S G+ D +D+Y W IIGP +T++EG +++ L KDYP +PP ++F + I
Sbjct: 26 SAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 78
>sp|P62254|UB2G1_MOUSE Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2
SV=3
Length = 170
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
S G+ D +D+Y W IIGP +T++EG +++ L KDYP +PP ++F + I
Sbjct: 26 SAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 78
>sp|P62253|UB2G1_HUMAN Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1
SV=3
Length = 170
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
S G+ D +D+Y W IIGP +T++EG +++ L KDYP +PP ++F + I
Sbjct: 26 SAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 78
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 101 VL 102
L
Sbjct: 85 CL 86
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 101 VL 102
L
Sbjct: 85 CL 86
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 101 VL 102
L
Sbjct: 85 CL 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,649,347
Number of Sequences: 539616
Number of extensions: 2212637
Number of successful extensions: 3902
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3654
Number of HSP's gapped (non-prelim): 255
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)