Query 033475
Match_columns 118
No_of_seqs 114 out of 1040
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 03:39:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a4d_A Ubiquitin-conjugating e 100.0 6.8E-38 2.3E-42 218.6 9.8 111 6-116 18-131 (160)
2 1zdn_A Ubiquitin-conjugating e 100.0 7E-37 2.4E-41 213.0 8.7 107 5-116 5-112 (158)
3 2hlw_A Ubiquitin-conjugating e 100.0 4E-37 1.4E-41 216.6 7.2 110 7-116 29-141 (170)
4 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-36 8.9E-41 205.7 9.3 99 15-116 24-125 (136)
5 2ucz_A UBC7, ubiquitin conjuga 100.0 4E-36 1.4E-40 210.3 10.2 101 12-116 3-117 (165)
6 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.3E-36 1.5E-40 211.1 9.7 100 12-116 3-103 (169)
7 2e2c_A Ubiquitin conjugating e 100.0 3.9E-36 1.3E-40 208.8 9.3 100 12-116 8-108 (156)
8 2fo3_A Ubiquitin-conjugating e 100.0 3.7E-36 1.3E-40 202.2 8.7 98 14-116 7-106 (125)
9 2ayv_A Ubiquitin-conjugating e 100.0 6.2E-36 2.1E-40 209.8 10.2 107 5-116 13-120 (166)
10 1jat_B Ubiquitin-conjugating e 100.0 4.1E-36 1.4E-40 205.0 8.6 103 12-116 5-111 (138)
11 1fxt_A Ubiquitin-conjugating e 100.0 2.2E-36 7.6E-41 208.6 7.0 100 14-116 2-102 (149)
12 2c4o_A Ubiquitin-conjugating e 100.0 1.1E-35 3.8E-40 208.3 10.2 107 5-116 11-118 (165)
13 3h8k_A Ubiquitin-conjugating e 100.0 1.2E-35 3.9E-40 207.8 10.3 100 13-116 3-116 (164)
14 2aak_A UBC1, ubiquitin conjuga 100.0 9.4E-36 3.2E-40 206.0 9.5 100 12-116 3-103 (152)
15 2q0v_A Ubiquitin-conjugating e 100.0 9.9E-36 3.4E-40 206.9 9.4 108 6-116 14-126 (156)
16 2h2y_A Ubiquitin-conjugating e 100.0 2.5E-35 8.4E-40 200.8 11.0 99 13-116 20-120 (136)
17 1i7k_A Ubiquitin-conjugating e 100.0 7.3E-36 2.5E-40 211.6 8.6 102 10-116 27-129 (179)
18 3rcz_B SUMO-conjugating enzyme 100.0 1.6E-35 5.5E-40 207.1 10.1 103 11-116 8-116 (163)
19 4gpr_A Ubiquitin-conjugating e 100.0 1.8E-35 6.3E-40 204.4 10.0 100 12-116 3-103 (151)
20 2awf_A Ubiquitin-conjugating e 100.0 2.3E-35 7.9E-40 207.9 10.6 103 10-116 14-130 (172)
21 1z2u_A Ubiquitin-conjugating e 100.0 2E-35 6.7E-40 204.0 9.9 99 13-116 4-103 (150)
22 3rz3_A Ubiquitin-conjugating e 100.0 2.9E-35 9.9E-40 209.1 10.7 101 12-116 6-120 (183)
23 1jat_A Ubiquitin-conjugating e 100.0 1.2E-35 4.3E-40 206.0 8.5 99 13-116 5-104 (155)
24 3fn1_B NEDD8-conjugating enzym 100.0 1.4E-35 4.7E-40 208.0 8.5 109 3-116 4-119 (167)
25 2bep_A Ubiquitin-conjugating e 100.0 2.7E-35 9.1E-40 205.1 9.7 103 10-116 5-111 (159)
26 2grr_A Ubiquitin-conjugating e 100.0 2.9E-35 9.8E-40 205.4 9.7 105 9-116 3-113 (161)
27 1yh2_A HSPC150 protein similar 100.0 2.3E-35 7.8E-40 207.3 9.3 100 12-116 3-107 (169)
28 2c2v_B Ubiquitin-conjugating e 100.0 2.1E-35 7.3E-40 204.7 8.6 99 13-116 5-104 (154)
29 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.9E-35 9.8E-40 210.7 9.4 102 11-116 30-145 (193)
30 2r0j_A Ubiquitin carrier prote 100.0 2.9E-35 9.9E-40 203.0 9.0 97 15-116 3-100 (149)
31 2pwq_A Ubiquitin conjugating e 100.0 1.2E-35 4.3E-40 215.8 7.3 105 8-116 18-123 (216)
32 1yrv_A Ubiquitin-conjugating l 100.0 1.4E-35 4.9E-40 208.5 6.9 105 8-116 18-125 (169)
33 2gjd_A Ubiquitin-conjugating e 100.0 1E-34 3.5E-39 201.9 9.8 102 12-116 3-110 (157)
34 1tte_A Ubiquitin-conjugating e 100.0 1.3E-35 4.3E-40 215.6 4.6 100 14-116 3-103 (215)
35 3bzh_A Ubiquitin-conjugating e 100.0 1.1E-34 3.6E-39 207.9 9.3 100 12-116 47-147 (194)
36 3k9o_A Ubiquitin-conjugating e 100.0 1.3E-34 4.4E-39 208.3 9.6 101 12-116 4-108 (201)
37 2y9m_A Ubiquitin-conjugating e 100.0 2.1E-34 7.2E-39 203.0 10.1 105 10-116 3-120 (172)
38 3e46_A Ubiquitin-conjugating e 100.0 2.5E-34 8.4E-39 213.1 9.9 105 8-116 52-160 (253)
39 1wzv_A Ubiquitin-conjugating e 100.0 1.7E-34 5.7E-39 200.3 7.8 99 13-116 4-104 (155)
40 1y8x_A Ubiquitin-conjugating e 100.0 4.5E-34 1.5E-38 199.2 9.2 98 12-116 5-103 (160)
41 2nvu_C NEDD8-conjugating enzym 100.0 5.1E-34 1.7E-38 202.3 9.1 101 9-116 22-123 (180)
42 1c4z_D UBCH7, ubiquitin conjug 100.0 6.5E-34 2.2E-38 197.1 6.2 98 14-116 3-102 (154)
43 1yf9_A Ubiquitin carrier prote 100.0 4.3E-34 1.5E-38 201.2 5.0 97 12-116 11-108 (171)
44 4ds2_A Ubiquitin-conjugating e 100.0 2.9E-34 9.9E-39 201.3 3.7 100 11-115 6-120 (167)
45 2onu_A Ubiquitin-conjugating e 100.0 6.7E-34 2.3E-38 196.9 3.6 95 15-116 4-99 (152)
46 2f4w_A Ubiquitin-conjugating e 100.0 1.4E-32 4.6E-37 196.0 9.2 108 1-116 3-114 (187)
47 3o2u_A NEDD8-conjugating enzym 100.0 2.4E-32 8.2E-37 195.1 8.6 101 9-116 25-132 (190)
48 2z5d_A Ubiquitin-conjugating e 100.0 7E-33 2.4E-37 196.3 5.5 96 13-116 25-121 (179)
49 4ddg_A Ubiquitin-conjugating e 100.0 6.4E-32 2.2E-36 211.1 9.4 99 13-116 3-102 (399)
50 1zuo_A Hypothetical protein LO 100.0 6.8E-32 2.3E-36 192.2 5.2 103 9-116 23-143 (186)
51 3ceg_A Baculoviral IAP repeat- 100.0 3E-31 1E-35 201.9 8.7 104 9-115 72-191 (323)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.1E-26 3.7E-31 161.5 -0.7 92 14-116 33-140 (172)
53 3kpa_A Probable ubiquitin fold 99.7 2.9E-19 9.8E-24 122.1 0.9 88 14-115 35-134 (168)
54 3r3q_A Suppressor protein STP2 99.5 2.4E-14 8.1E-19 99.6 5.5 91 16-112 31-139 (162)
55 3obq_A Tumor susceptibility ge 99.2 1.8E-11 6E-16 83.8 7.3 59 46-111 53-120 (146)
56 2ebm_A RWD domain-containing p 97.1 0.004 1.4E-07 40.5 8.6 70 12-87 9-78 (128)
57 2day_A Ring finger protein 25; 96.6 0.021 7.2E-07 37.0 8.7 71 15-88 10-83 (128)
58 2yz0_A Serine/threonine-protei 96.1 0.079 2.7E-06 34.7 9.6 68 14-87 11-85 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 96.1 0.051 1.8E-06 35.5 8.6 78 5-86 2-85 (137)
60 2ebk_A RWD domain-containing p 94.8 0.073 2.5E-06 34.4 5.6 67 17-87 11-79 (128)
61 2daw_A RWD domain containing p 92.1 0.16 5.6E-06 34.1 3.9 25 64-88 75-99 (154)
62 2dax_A Protein C21ORF6; RWD do 91.9 0.11 3.9E-06 34.6 2.9 25 64-88 73-97 (152)
63 3zqs_A E3 ubiquitin-protein li 68.1 5.4 0.00018 27.7 3.6 60 16-89 4-63 (186)
64 3g9r_A Fusion complex of HIV-1 49.7 12 0.0004 19.4 2.0 16 12-27 27-42 (42)
65 3u3c_B Paxillin LD2 peptide; 4 43.9 19 0.00067 16.4 2.1 20 13-32 5-24 (26)
66 2bum_A Protocatechuate 3,4-dio 40.8 26 0.00089 24.6 3.4 26 62-87 109-139 (209)
67 3qrl_A Transcription initiatio 38.6 83 0.0028 20.7 5.6 43 46-90 32-77 (140)
68 3rls_A YAF9, protein AF-9 homo 35.1 1.1E+02 0.0036 20.9 6.1 40 46-87 32-71 (175)
69 2diq_A Tudor and KH domain-con 31.8 88 0.003 19.0 4.8 24 5-28 2-25 (110)
70 2rf4_B DNA-directed RNA polyme 31.4 23 0.00078 21.5 1.6 15 11-25 60-74 (87)
71 2ccv_A Helix pomatia agglutini 29.9 96 0.0033 18.9 4.4 27 62-89 27-53 (101)
72 2xsu_A Catechol 1,2 dioxygenas 24.8 42 0.0015 25.0 2.4 25 62-86 187-229 (312)
73 2c5k_P Vacuolar protein sortin 24.6 37 0.0013 15.8 1.3 14 15-28 12-25 (26)
74 2bum_B Protocatechuate 3,4-dio 24.4 44 0.0015 24.0 2.3 26 62-87 134-166 (241)
75 3t63_M 3,4-PCD, protocatechuat 24.1 45 0.0015 23.9 2.3 24 63-86 134-164 (238)
76 2azq_A Catechol 1,2-dioxygenas 23.2 47 0.0016 24.7 2.4 24 63-86 184-225 (311)
77 1tmx_A Hydroxyquinol 1,2-dioxy 23.1 48 0.0016 24.5 2.4 25 62-86 183-225 (293)
78 3t63_A 3,4-PCD, protocatechuat 22.5 53 0.0018 22.8 2.4 23 64-86 102-129 (200)
79 3t97_B Nuclear pore complex pr 22.4 38 0.0013 19.4 1.4 24 5-28 2-25 (65)
80 3n9t_A PNPC; phospholipid bind 22.0 52 0.0018 24.3 2.4 24 63-86 181-222 (290)
81 3kxt_A Chromatin protein CREN7 21.6 53 0.0018 18.1 1.8 11 68-78 46-56 (56)
82 2boy_A 3-chlorocatechol 1,2-di 21.5 55 0.0019 23.6 2.4 24 63-86 154-195 (254)
83 4dac_A Computationally designe 21.5 70 0.0024 14.7 1.9 14 14-27 9-22 (28)
84 3zs9_C Golgi to ER traffic pro 21.3 64 0.0022 16.4 1.9 19 8-26 2-20 (38)
85 1dmh_A 1,2-CTD, catechol 1,2-d 20.6 57 0.0019 24.3 2.3 24 63-86 187-228 (311)
No 1
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=6.8e-38 Score=218.56 Aligned_cols=111 Identities=51% Similarity=0.885 Sum_probs=96.4
Q ss_pred CCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEE
Q 033475 6 GGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (118)
Q Consensus 6 ~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f 85 (118)
+++++.++|.|||+||++++++++++|++++.+++++|+++++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 18 ~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 97 (160)
T 2a4d_A 18 GSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRF 97 (160)
T ss_dssp ---CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred cCCeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEE
Confidence 34557788999999999999999988876776656665225699999999999999999999999999999999999999
Q ss_pred eccceeccccCCCceEE-eCCC--CCCcccEEec
Q 033475 86 HSRINMTCVNHETGVVL-FLFD--LNSVHLVFLA 116 (118)
Q Consensus 86 ~t~i~HPnV~~~~g~~c-~~L~--~~w~~~~~~~ 116 (118)
.|++|||||+..+|.+| ++|+ ++|+|.+++.
T Consensus 98 ~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~ 131 (160)
T 2a4d_A 98 VTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIK 131 (160)
T ss_dssp SBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHH
T ss_pred ecCceeCCEECCCCEEehhhcCCccCCCccCcHH
Confidence 99999999996578888 9998 9999998764
No 2
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7e-37 Score=212.98 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=93.4
Q ss_pred CCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEE
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 84 (118)
+++.+++..+.+||++|++++++++++|+ .+. ++++| +++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 5 ~~~~~~s~~~~~RL~kEl~~l~~~~~~gi-~~~-~~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 80 (158)
T 1zdn_A 5 SNVENLPPHIIRLVYKEVTTLTADPPDGI-KVF-PNEED--LTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGY 80 (158)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHSCCTTE-EEE-ECSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred ccccccCHHHHHHHHHHHHHHHhCCCCCE-EEE-ECCCC--hhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEE
Confidence 35566777889999999999999999995 444 46677 559999999999999999999999999999999999999
Q ss_pred EeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 85 FHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 85 f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|.|++|||||+. +|.|| ++|+++|.|.+++.
T Consensus 81 f~t~i~HPnv~~-~G~iCl~iL~~~W~p~~~i~ 112 (158)
T 1zdn_A 81 FLTKIFHPNVGA-NGEICVNVLKRDWTAELGIR 112 (158)
T ss_dssp ESSCCCCTTBCT-TSBBCHHHHTTTCCTTCCHH
T ss_pred eccCcccCCCCC-CCEEehhhcCCCCCCCCcHH
Confidence 999999999996 58777 99999999987654
No 3
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=216.57 Aligned_cols=110 Identities=51% Similarity=0.862 Sum_probs=96.2
Q ss_pred CccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEe
Q 033475 7 GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (118)
Q Consensus 7 ~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 86 (118)
++.+.++|.+||+||++++++++++|++++.+.+++|+++++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 29 ~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 29 CKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred CCcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 33456789999999999999999888777766566542255999999999999999999999999999999999999999
Q ss_pred ccceeccccCCCceEE-eCCC--CCCcccEEec
Q 033475 87 SRINMTCVNHETGVVL-FLFD--LNSVHLVFLA 116 (118)
Q Consensus 87 t~i~HPnV~~~~g~~c-~~L~--~~w~~~~~~~ 116 (118)
|+||||||+..+|.|| ++|+ ++|+|.+++.
T Consensus 109 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~ 141 (170)
T 2hlw_A 109 TKINMNGVNSSNGVVDPRAISVLAKWQNSYSIK 141 (170)
T ss_dssp BCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHH
T ss_pred cccccCCEeCCCCEEEhhhcCCCCCCCccCcHH
Confidence 9999999996678888 9998 9999998764
No 4
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-36 Score=205.66 Aligned_cols=99 Identities=19% Similarity=0.222 Sum_probs=87.9
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccce--ec
Q 033475 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN--MT 92 (118)
Q Consensus 15 ~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--HP 92 (118)
.+||+||++++++++++|+.....++++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HP 101 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNS--ITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHP 101 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCS--CEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccc--cceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCc
Confidence 48999999999999998853212356778 669999999999999999999999999999999999999999999 99
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+. +|.|| ++|+++|+|.+++.
T Consensus 102 NV~~-~G~ICL~iL~~~WsP~~ti~ 125 (136)
T 2a7l_A 102 HVYS-NGHICLSILTEDWSPALSVQ 125 (136)
T ss_dssp TBCT-TCBBCCGGGTTTCCTTSCHH
T ss_pred cCCC-CCeEEchhcCCCCCCCCcHH
Confidence 9995 77777 99999999998764
No 5
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4e-36 Score=210.32 Aligned_cols=101 Identities=25% Similarity=0.340 Sum_probs=89.9
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|+++|++++++|+ .+.+.+++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~gi-~~~~~~~~~--l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 3 KTAQKRLLKELQQLIKDSPPGI-VAGPKSENN--IFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTE-EEEESSSSC--CSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEEECCCCC--ccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 4578899999999999999885 555556667 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCC-------------CCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLF-------------DLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L-------------~~~w~~~~~~~ 116 (118)
|||+. +|.|| ++| .++|+|.+++.
T Consensus 80 PNv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~ 117 (165)
T 2ucz_A 80 PNIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVE 117 (165)
T ss_dssp TTBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHH
T ss_pred CCCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHH
Confidence 99996 67777 999 68999998753
No 6
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-36 Score=211.12 Aligned_cols=100 Identities=27% Similarity=0.418 Sum_probs=89.7
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|+++|++++++|+. +. +.++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+|||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~gi~-~~-p~~~n--l~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 3 TPARRRLMRDFKRMKEDAPPGVS-AS-PLPDN--VMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEE-EE-EETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEE-EE-ecCCc--cccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 35678999999999999999964 33 34667 6799999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.|| ++|+++|+|.+++.
T Consensus 79 PNI~~-~G~ICl~iL~~~WsP~~~i~ 103 (169)
T 1ayz_A 79 PNVYA-NGEICLDILQNRWTPTYDVA 103 (169)
T ss_dssp TTBCT-TSBBCCGGGTTTCCTTCCHH
T ss_pred CCCCC-CCeEeehhhccCCCCcCcHH
Confidence 99996 77777 99999999998764
No 7
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-36 Score=208.78 Aligned_cols=100 Identities=29% Similarity=0.366 Sum_probs=89.2
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|++++++++++|+ .+. ++++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i-~~~-p~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGI-TAF-PDGDN--LFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTE-EEE-ESSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEE-ECCCC--ccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCccc
Confidence 4567899999999999988885 444 35667 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.|| ++|.++|.|.+++.
T Consensus 84 Pnv~~-~G~iCl~iL~~~W~p~~~i~ 108 (156)
T 2e2c_A 84 PNVDQ-SGNICLDILKENWTASYDVR 108 (156)
T ss_dssp TTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred CCCcc-CceEECccccccCCCCCcHH
Confidence 99996 67777 99999999998764
No 8
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-36 Score=202.20 Aligned_cols=98 Identities=24% Similarity=0.376 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccc-eec
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NMT 92 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HP 92 (118)
+.+||++|+++++++++.|+ .+. ++++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 7 a~~RL~kEl~~l~~~~~~~~-~~~-~~~~~--l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINC-TLD-VHPNN--IRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTE-EEE-ECTTC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred HHHHHHHHHHHHHhCCCCCE-EEE-eCcch--hhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 46799999999999998884 544 36678 55999999999999999999999999999999999999999997 999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+. +|.+| ++|+++|+|.+++.
T Consensus 83 nv~~-~G~iCl~iL~~~W~P~~~i~ 106 (125)
T 2fo3_A 83 HVYS-NGDICLSLLGDDYNPSLSIS 106 (125)
T ss_dssp TBCT-TSBBCCGGGTTTCCTTCCHH
T ss_pred cCCC-CCEEEchhcCCCCCCCCcHH
Confidence 9995 77777 99999999998764
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-36 Score=209.76 Aligned_cols=107 Identities=26% Similarity=0.397 Sum_probs=90.7
Q ss_pred CCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEE
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 84 (118)
.........+.+||++|+++++++++.|+ .+.+ +++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+
T Consensus 13 ~~~~~~~~~~~~RL~kEl~~l~~~~~~gi-~~~~-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 88 (166)
T 2ayv_A 13 GRENLYFQGALKRINKELNDLSKDPPTNC-SAGP-VGDD--MFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVN 88 (166)
T ss_dssp ------CTTHHHHHHHHHHHHHHSCCTTE-EEEE-CSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ccccccCcHHHHHHHHHHHHHHhCCCCCE-EEEE-cCCC--cceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceee
Confidence 33445556689999999999999999885 5543 5667 559999999999999999999999999999999999999
Q ss_pred EeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 85 FHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 85 f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|.|++|||||+. +|.|| ++|+++|+|.+++.
T Consensus 89 F~T~i~HPNI~~-~G~ICL~iL~~~WsP~~ti~ 120 (166)
T 2ayv_A 89 FTTKIYHPNINS-QGAICLDILKDQWSPALTIS 120 (166)
T ss_dssp ECSCCCBTTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred eccCCcCCcCCC-CCeEEcccccccCCCCCcHH
Confidence 999999999995 67777 99999999998754
No 10
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.1e-36 Score=205.03 Aligned_cols=103 Identities=50% Similarity=0.898 Sum_probs=85.8
Q ss_pred chHHHHHHHHHHHhHcC-CCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccce
Q 033475 12 VPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~-~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 90 (118)
.+|.+||+||+++++++ ++.+ +.+.+.++++.++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~-~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 83 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPES-CSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN 83 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CC-EEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-EEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc
Confidence 56789999999999998 6667 565554443311569999999999999999999999999999999999999999999
Q ss_pred eccccCCCceE--E-eCCCCCCcccEEec
Q 033475 91 MTCVNHETGVV--L-FLFDLNSVHLVFLA 116 (118)
Q Consensus 91 HPnV~~~~g~~--c-~~L~~~w~~~~~~~ 116 (118)
||||+.++|.| | ++|+ +|+|.+++.
T Consensus 84 HPnv~~~~G~i~~cL~~l~-~W~p~~~i~ 111 (138)
T 1jat_B 84 LPCVNPTTGEVQTDFHTLR-DWKRAYTME 111 (138)
T ss_dssp CTTBCTTTCBBCTTSHHHH-TCCTTCCHH
T ss_pred cCCEeCCCCEEeeecccCC-CCCCcCcHH
Confidence 99999876887 5 7776 899998764
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.2e-36 Score=208.55 Aligned_cols=100 Identities=20% Similarity=0.377 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceecc
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 93 (118)
+.+||++|+++++++++.|+ .+.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i-~~~~~~~~~--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHI-TLEFVSESD--IHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCC-EEEESSSSC--SSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCCE-EEEECCCCC--ceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 46899999999999998885 555544547 569999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEE-eCCCCCCcccEEec
Q 033475 94 VNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 94 V~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|+..+|.+| ++|+++|+|.+++.
T Consensus 79 i~~~~G~iCl~iL~~~W~p~~~i~ 102 (149)
T 1fxt_A 79 ISSVTGAICLDILKNAWSPVITLK 102 (149)
T ss_dssp BCSSSCCBCCHHHHTSCCTTCCHH
T ss_pred CcCCCCeEeCCcCCCCCCCCCcHH
Confidence 996477777 99999999998754
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.1e-35 Score=208.28 Aligned_cols=107 Identities=28% Similarity=0.409 Sum_probs=91.1
Q ss_pred CCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEE
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 84 (118)
++-......+.+||++|+++++++++.|+ .+.+ +++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 11 ~~~~~~~~~~~~RL~kEl~~l~~~~~~gi-~~~p-~~~n--l~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~ 86 (165)
T 2c4o_A 11 SGLVPRGSMALKRIHKELNDLARDPPAQC-SAGP-VGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVA 86 (165)
T ss_dssp -----CCHHHHHHHHHHHHHHHSSCCTTE-EEEE-SSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred cccccCCcHHHHHHHHHHHHHHhCCCCCE-EEEE-cCCC--cceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEE
Confidence 34444556688999999999999999885 5543 5567 559999999999999999999999999999999999999
Q ss_pred EeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 85 FHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 85 f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|.|+||||||+. +|.|| ++|+++|+|.+++.
T Consensus 87 F~T~i~HPnV~~-~G~ICl~iL~~~W~P~~ti~ 118 (165)
T 2c4o_A 87 FTTRIYHPNINS-NGSICLDILRSQWSPALTIS 118 (165)
T ss_dssp ECSCCCBTTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred EecCCcCCcCCC-CCeEeehhhcCCCCCcCcHH
Confidence 999999999996 77777 99999999998754
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.2e-35 Score=207.77 Aligned_cols=100 Identities=21% Similarity=0.316 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.|||++|++++++++++|+ .+...+++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi-~~~~~~~~n--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGI-VAGPMNEEN--FFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 79 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTE-EEEESSTTC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEEECCCCC--ccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccC
Confidence 468899999999999999995 555555657 55999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCC-------------CCCcccEEec
Q 033475 93 CVNHETGVVL-FLFD-------------LNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~-------------~~w~~~~~~~ 116 (118)
||+. +|.+| ++|+ ++|+|.+++.
T Consensus 80 NV~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~ 116 (164)
T 3h8k_A 80 NIYP-DGRVCISILHAPGDDPMGYESSAERWSPVQSVE 116 (164)
T ss_dssp TBCT-TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHH
T ss_pred CCCC-CCcEeeecccCcccccccccccccCCCCCCcHH
Confidence 9995 77777 9997 8999998754
No 14
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=9.4e-36 Score=206.03 Aligned_cols=100 Identities=27% Similarity=0.491 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
.++.+||++|++++++++++|+ .+. ++++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 ~~a~~RL~~E~~~l~~~~~~~i-~~~-~~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 3 TPARKRLMRDFKRLQQDPPAGI-SGA-PQDNN--IMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTE-EEE-EETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEE-eCCCC--ccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 4567899999999999999995 443 35667 6799999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.+| ++|.++|+|.+++.
T Consensus 79 Pnv~~-~G~iCl~iL~~~W~p~~~i~ 103 (152)
T 2aak_A 79 PNIYA-DGSICLDILQNQWSPIYDVA 103 (152)
T ss_dssp TTBCT-TSBBCCGGGTTSCCTTCCHH
T ss_pred CCCCC-CCEEechhhcCCCCCCCcHH
Confidence 99996 78777 99999999998754
No 15
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=9.9e-36 Score=206.91 Aligned_cols=108 Identities=44% Similarity=0.883 Sum_probs=91.4
Q ss_pred CCccccchHHHHHHHHHHHhHcC-CCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEE
Q 033475 6 GGSSVVVPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (118)
Q Consensus 6 ~~s~~~~~~~kRl~kEl~~l~~~-~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 84 (118)
++..++++|.+||+||+++++++ ++.+ +++.+.++++.+++.|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 14 ~~~~~~~~~~~RL~kEl~~l~~~~~~~~-i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~ 92 (156)
T 2q0v_A 14 LYFQGIVPRSFRLLDELERGQKGNVSEG-VSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVK 92 (156)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHCC-CCTT-EEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred cCCcccchHHHHHHHHHHHHHhCCCCCC-eEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEE
Confidence 35567788999999999999998 6666 566655433211569999999999999999999999999999999999999
Q ss_pred EeccceeccccCCCceE---E-eCCCCCCcccEEec
Q 033475 85 FHSRINMTCVNHETGVV---L-FLFDLNSVHLVFLA 116 (118)
Q Consensus 85 f~t~i~HPnV~~~~g~~---c-~~L~~~w~~~~~~~ 116 (118)
|.|+||||||+. +|.+ | ++|+ +|+|.+++.
T Consensus 93 F~t~i~HPNV~~-~G~icisCL~iL~-~WsP~~ti~ 126 (156)
T 2q0v_A 93 FDTKIEMSCVDN-CGRVIKNNLHILK-NWNRNYTIE 126 (156)
T ss_dssp ESBCCCCTTBCT-TSBBCGGGSHHHH-TCCTTCCHH
T ss_pred EEcccccCCCcc-CCeEehhhccccc-CCCCcCcHH
Confidence 999999999996 4766 6 8887 599998764
No 16
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-35 Score=200.79 Aligned_cols=99 Identities=22% Similarity=0.351 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccc-ee
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NM 91 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 91 (118)
.+.+||++|+++++++++.|+ .+. ++++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~-~~~-~~~~n--l~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINC-TID-VHPSN--IRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTE-EEE-ECTTC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCe-EEE-ecccc--ccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 468999999999999998884 554 35678 55999999999999999999999999999999999999999996 99
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.+| ++|+++|+|.+++.
T Consensus 96 Pnv~~-~G~ICl~iL~~~WsP~~ti~ 120 (136)
T 2h2y_A 96 THVYS-NGDICLSVLGDDYNPSLSIS 120 (136)
T ss_dssp TTBCT-TCCBCCGGGTTTCCTTCCHH
T ss_pred CcCCC-CCEEECccccCCCCCCCcHH
Confidence 99996 77777 99999999998764
No 17
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.3e-36 Score=211.62 Aligned_cols=102 Identities=26% Similarity=0.296 Sum_probs=89.5
Q ss_pred ccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccc
Q 033475 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (118)
Q Consensus 10 ~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 89 (118)
++..+.+||++|++++++++++|+ .+. ++++| ++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi-~~~-p~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 102 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGI-SAF-PESDN--LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 102 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTE-EEE-EETTE--EEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cChHHHHHHHHHHHHHHhCCCCCE-EEE-EcCCc--ccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCC
Confidence 456688999999999999988885 444 35667 67999999999999999999999999999999999999999999
Q ss_pred eeccccCCCceEE-eCCCCCCcccEEec
Q 033475 90 NMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 90 ~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||||+. +|.|| ++|+++|.|.+++.
T Consensus 103 ~HPNV~~-~G~ICL~iL~~~WsP~~ti~ 129 (179)
T 1i7k_A 103 YHPNVDT-QGNISLDILKEKWSALYDVR 129 (179)
T ss_dssp CSTTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred ccCcccc-CCeEEcccCcCcCCCCCCHH
Confidence 9999996 67777 99999999998764
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-35 Score=207.11 Aligned_cols=103 Identities=23% Similarity=0.346 Sum_probs=89.1
Q ss_pred cchHHHHHHHHHHHhHcCCCCCceEEeccCCC---CcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGD---DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 11 ~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~---n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
+..+.+||+||++++++++++|+.+....++| | +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~n--l~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLD--LMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCC--ccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC
Confidence 35677899999999999999997554332222 6 779999999999999999999999999999999999999999
Q ss_pred cceeccccCCCceEE-eCCCCC--CcccEEec
Q 033475 88 RINMTCVNHETGVVL-FLFDLN--SVHLVFLA 116 (118)
Q Consensus 88 ~i~HPnV~~~~g~~c-~~L~~~--w~~~~~~~ 116 (118)
++|||||+. +|.+| ++|+.+ |+|.+++.
T Consensus 86 ~i~HPnV~~-~G~iCl~iL~~~~~W~p~~ti~ 116 (163)
T 3rcz_B 86 PLFHPNVYP-SGTVCLSILNEEEGWKPAITIK 116 (163)
T ss_dssp CCCSTTBCT-TSBBCCGGGCTTTTCCTTCCHH
T ss_pred CCccCCCCC-CCcEeccccCCCCCcCCcCcHH
Confidence 999999994 77777 999876 99998764
No 19
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.8e-35 Score=204.40 Aligned_cols=100 Identities=27% Similarity=0.408 Sum_probs=89.4
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.|||++|+++++++++.|+ .+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i-~~~p-~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNC-SAGP-VGDD--IFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTE-EEEE-SSSC--TTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEEE-cCCC--ceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 4568899999999999999885 5543 4567 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.+| ++|+++|.|.+++.
T Consensus 79 Pnv~~-~G~iCl~iL~~~W~p~~~i~ 103 (151)
T 4gpr_A 79 PNINK-NGVICLDILKDQWSPALTLS 103 (151)
T ss_dssp TTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred ceECC-CCEEEcccccCCCCCCCcHH
Confidence 99995 77777 99999999998754
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.3e-35 Score=207.90 Aligned_cols=103 Identities=28% Similarity=0.455 Sum_probs=90.6
Q ss_pred ccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccc
Q 033475 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (118)
Q Consensus 10 ~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 89 (118)
.+..+.|||+||+++|++++++|+ .+.+.+++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi-~~~p~~~~n--l~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i 90 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGF-SAGLIDDND--LYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 90 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTE-EEEESSTTC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCE-EEEECCCcc--ccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCC
Confidence 345678899999999999999884 555556678 55999999999999999999999999999999999999999999
Q ss_pred eeccccCCCceEE-eCCC-------------CCCcccEEec
Q 033475 90 NMTCVNHETGVVL-FLFD-------------LNSVHLVFLA 116 (118)
Q Consensus 90 ~HPnV~~~~g~~c-~~L~-------------~~w~~~~~~~ 116 (118)
|||||+. +|.|| ++|. ++|+|.+++.
T Consensus 91 ~HPNV~~-~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~ 130 (172)
T 2awf_A 91 WHPNVDK-NGDVCISILHEPGEDKYGYEKPEERWLPIHTVE 130 (172)
T ss_dssp CCTTBCT-TCBBCCGGGSCC---------CTTSCCTTCCHH
T ss_pred ccCCCCC-CCcEehhhcCCcccccccccccCCCCCCcCcHH
Confidence 9999996 57777 9997 6899998754
No 21
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2e-35 Score=204.01 Aligned_cols=99 Identities=27% Similarity=0.434 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.+||++|++++++++++|+ .+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~-~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQC-SAGP-VGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 79 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSE-EEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEEE-CCCc--ceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccC
Confidence 467899999999999999885 5443 4567 67999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+. +|.+| ++|+++|+|.+++.
T Consensus 80 nv~~-~G~iCl~iL~~~W~p~~~i~ 103 (150)
T 1z2u_A 80 NINS-NGSICLDILRSQWSPALTIS 103 (150)
T ss_dssp TBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred cCCC-CCeEeeccccCCCCCCCCHH
Confidence 9996 67777 99999999998764
No 22
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.9e-35 Score=209.14 Aligned_cols=101 Identities=26% Similarity=0.345 Sum_probs=90.0
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.|||++|++++++++++|+ .+.+++++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 6 ~~a~kRL~kEl~~l~~~~~~gi-~~~~~~~~n--l~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEPVEGF-RVTLVDEGD--LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTE-EEEECTTCC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEEecCccc--hhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 4578899999999999999995 555567788 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCC-------------CCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFD-------------LNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~-------------~~w~~~~~~~ 116 (118)
|||+. +|.+| ++|. ++|+|.+++.
T Consensus 83 PnV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~ 120 (183)
T 3rz3_A 83 PNIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVR 120 (183)
T ss_dssp TTBCT-TSBBCCTTC--------------CCCCTTCCHH
T ss_pred CCCCC-CCcEehhhcCcccccccccccccCCCCCcCcHH
Confidence 99996 77777 9997 8999988754
No 23
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.2e-35 Score=206.04 Aligned_cols=99 Identities=24% Similarity=0.382 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.+||++|++++++++++|+ .+. ++++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i-~~~-~~~~~--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGI-TAE-PHDDN--LRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHP 80 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTE-EEE-EETTE--EEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEE-ECCCc--hhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccC
Confidence 346899999999999998885 444 35567 67999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+ .+|.+| ++|+++|+|.+++.
T Consensus 81 nv~-~~G~iCl~iL~~~W~p~~~i~ 104 (155)
T 1jat_A 81 NID-RLGRICLDVLKTNWSPALQIR 104 (155)
T ss_dssp TBC-TTCCBCCGGGTTTCCTTCCHH
T ss_pred CCC-CCCEEEchhhccCCCCCCCHH
Confidence 999 577777 99999999998764
No 24
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.4e-35 Score=207.99 Aligned_cols=109 Identities=18% Similarity=0.213 Sum_probs=93.4
Q ss_pred CCCCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCE
Q 033475 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPS 82 (118)
Q Consensus 3 ~~~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~ 82 (118)
+.+.+++.+..|.|||++|++++++++++| +.+.+++++| ++.|.++| ||++|||+||.|+++|.||++||++||+
T Consensus 4 ~~~~~~~~~s~~~~RL~kEl~~l~~~~~~g-i~~~~~~~~~--l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~ 79 (167)
T 3fn1_B 4 TASDSTRRVSVRDKLLVKEVAELEANLPCT-CKVHFPDPNK--LHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPK 79 (167)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHGGGSCTT-EEEECSSSSC--TTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCE
T ss_pred ccCCCccchhHHHHHHHHHHHHHHhCCCCC-EEEEeCCCCc--ceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCe
Confidence 345666778889999999999999999999 4666566777 55999998 8999999999999999999999999999
Q ss_pred EEEeccceeccccCCCceEE-eCCCC------CCcccEEec
Q 033475 83 VRFHSRINMTCVNHETGVVL-FLFDL------NSVHLVFLA 116 (118)
Q Consensus 83 v~f~t~i~HPnV~~~~g~~c-~~L~~------~w~~~~~~~ 116 (118)
|+|.|++|||||+. +|.+| ++|+. +|+|.+++.
T Consensus 80 v~f~t~i~HPnv~~-~G~iCl~iL~~~~~~~~~W~p~~~i~ 119 (167)
T 3fn1_B 80 VKCLTKIWHPNITE-TGEICLSLLREHSIDGTGWAPTRTLK 119 (167)
T ss_dssp EEECSCCCCSSBCT-TCCBCCGGGSBCSSSTTSBCTTCCHH
T ss_pred eEecCCcccCCCCC-CCEEechhhccCCCCCCCCCCcCcHH
Confidence 99999999999995 77777 99986 799987754
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.7e-35 Score=205.12 Aligned_cols=103 Identities=23% Similarity=0.334 Sum_probs=89.4
Q ss_pred ccchHHHHHHHHHHHhHcC---CCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEe
Q 033475 10 VVVPRNFRLLEELERGEKG---IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (118)
Q Consensus 10 ~~~~~~kRl~kEl~~l~~~---~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 86 (118)
++..+.+||+||+++|+++ ++.| +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~-i~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 80 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQ-IKVDL-VDEN--FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 80 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTS-EEEEE-CSSS--SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCC-EEEEe-CCCc--hheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEee
Confidence 3445789999999999985 4567 45554 4557 56999999999999999999999999999999999999999
Q ss_pred ccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 87 SRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 87 t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|++|||||+..+|.+| ++|+++|+|.+++.
T Consensus 81 t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~ 111 (159)
T 2bep_A 81 TKIWHPNISSVTGAICLDILKDQWAAAMTLR 111 (159)
T ss_dssp SCCCBTTBCTTTCBBCCGGGTTTCCTTCCHH
T ss_pred CCCCccCCCCCCCEEeChhhhccCCCCCcHH
Confidence 9999999996578888 99999999998754
No 26
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.9e-35 Score=205.39 Aligned_cols=105 Identities=21% Similarity=0.329 Sum_probs=90.4
Q ss_pred cccchHHHHHHHHHHHhHcCCCCCceEEeccC---CCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEE
Q 033475 9 SVVVPRNFRLLEELERGEKGIGDGTVSYGMDD---GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (118)
Q Consensus 9 ~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~---~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f 85 (118)
.++..+.+||++|++++++++++|+.+....+ ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 80 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMN--LMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKF 80 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCC--ccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEE
Confidence 34556789999999999999999975543321 246 6799999999999999999999999999999999999999
Q ss_pred eccceeccccCCCceEE-eCCCC--CCcccEEec
Q 033475 86 HSRINMTCVNHETGVVL-FLFDL--NSVHLVFLA 116 (118)
Q Consensus 86 ~t~i~HPnV~~~~g~~c-~~L~~--~w~~~~~~~ 116 (118)
.|++|||||+. +|.+| ++|+. +|.|.+++.
T Consensus 81 ~t~i~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~ 113 (161)
T 2grr_A 81 EPPLFHPNVYP-SGTVCLSILEEDKDWRPAITIK 113 (161)
T ss_dssp SSCCCSTTBCT-TSBBCCGGGCTTTTCCTTCCHH
T ss_pred ecCcccCCCCC-CCeEeehhcCCCCCcCCCCcHH
Confidence 99999999995 78777 99987 899998654
No 27
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-35 Score=207.33 Aligned_cols=100 Identities=24% Similarity=0.330 Sum_probs=89.6
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|+++++++++.|+ .+. ++++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi-~~~-~~~~~--l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGI-TCW-QDKDQ--MDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYH 78 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTE-EEE-ESSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCE-EEE-eCCCc--hheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcc
Confidence 4678999999999999999885 444 45677 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCC----CCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFD----LNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~----~~w~~~~~~~ 116 (118)
|||+. +|.|| ++|+ ++|+|.+++.
T Consensus 79 PNv~~-~G~iCl~iL~~~~~~~W~p~~~i~ 107 (169)
T 1yh2_A 79 PNIDS-AGRICLDVLKLPPKGAWRPSLNIA 107 (169)
T ss_dssp TTBCT-TCBBCCGGGSCTTTSCCCTTSCHH
T ss_pred ccCCc-CCeEecccccCCcccCCCCCCcHH
Confidence 99994 67777 9999 9999998754
No 28
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-35 Score=204.73 Aligned_cols=99 Identities=23% Similarity=0.346 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.+||++|++++++++++|+ .+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i-~~~~-~~~~--l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGI-KAEP-DESN--ARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHP 80 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTE-EEEE-CSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEEE-CCCc--hheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccC
Confidence 345799999999999999885 5443 5567 55999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+. +|.+| ++|+++|+|.+++.
T Consensus 81 nv~~-~G~iCl~iL~~~W~p~~~i~ 104 (154)
T 2c2v_B 81 NVDK-LGRICLDILKDKWSPALQIR 104 (154)
T ss_dssp TBCT-TCBBCCHHHHTSCCTTCCHH
T ss_pred cCcc-CCeEEchhccCCCCCCCcHH
Confidence 9995 67777 99999999988764
No 29
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-35 Score=210.72 Aligned_cols=102 Identities=27% Similarity=0.451 Sum_probs=87.0
Q ss_pred cchHHHHHHHHHHHhHcCCC-------------CCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCC
Q 033475 11 VVPRNFRLLEELERGEKGIG-------------DGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP 77 (118)
Q Consensus 11 ~~~~~kRl~kEl~~l~~~~~-------------~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP 77 (118)
+..+.|||+||+++|+++++ .| +.+.+ .++| ++.|+++|.||++|||+||.|+|+|.||++||
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~g-i~v~~-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP 105 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHG-VSAQI-VGGD--IHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYP 105 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------C-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCc-EEEEE-cCCC--cceEEEEEeCCCCCCcCCCEEEEEEECCCcCC
Confidence 34578999999999999876 56 45554 4567 67999999999999999999999999999999
Q ss_pred CCCCEEEEeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 78 EKPPSVRFHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 78 ~~pP~v~f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
++||+|+|.|+||||||+..+|.|| ++|+++|.|.+++.
T Consensus 106 ~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~ 145 (193)
T 2f4z_A 106 YNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIR 145 (193)
T ss_dssp TSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHH
T ss_pred CCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHH
Confidence 9999999999999999996578887 99999999998764
No 30
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.9e-35 Score=203.03 Aligned_cols=97 Identities=24% Similarity=0.334 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceeccc
Q 033475 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (118)
Q Consensus 15 ~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 94 (118)
.+||++|++++++++++|+ .+.+ +++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~i-~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 78 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGI-MAVP-VPEN--YRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNI 78 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTE-EEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCE-EEEE-CCCc--ccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCC
Confidence 4799999999999998885 5443 5567 6799999999999999999999999999999999999999999999999
Q ss_pred cCCCceEE-eCCCCCCcccEEec
Q 033475 95 NHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 95 ~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
+. +|.+| ++|+++|+|.+++.
T Consensus 79 ~~-~G~iCl~iL~~~W~p~~~i~ 100 (149)
T 2r0j_A 79 DK-LGRICLDILKDKWSPALQIR 100 (149)
T ss_dssp CT-TCBBCCGGGTTTCCTTSCHH
T ss_pred CC-CCEEechhcCCCCCCCCcHH
Confidence 96 57777 99999999998754
No 31
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-35 Score=215.76 Aligned_cols=105 Identities=22% Similarity=0.329 Sum_probs=92.1
Q ss_pred ccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 8 s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
...+..+.+||++|++++++++++|+ .+.+ .++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi-~~~p-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T 93 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEI-DAHI-KDSN--FFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVT 93 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTE-EEEE-CSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCE-EEEE-cCCc--cceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccC
Confidence 33455678999999999999999885 5544 4567 559999999999999999999999999999999999999999
Q ss_pred cceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 88 RINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 88 ~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
+||||||+..+|.|| ++|+++|+|.+++.
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~ 123 (216)
T 2pwq_A 94 KIWHPNISSQTGAICLDVLKNEWSPALTIR 123 (216)
T ss_dssp CCCBTTBCTTTCBBCCHHHHHHCCTTCCHH
T ss_pred CCcCCCCcCCCCEEEchhhcccCCCCCcHH
Confidence 999999996678888 99999999998764
No 32
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-35 Score=208.46 Aligned_cols=105 Identities=22% Similarity=0.249 Sum_probs=91.7
Q ss_pred ccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 8 s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
.+++..+.+||++|+++|++++++|+ .+. +.++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 18 ~~M~~~a~~RL~kEl~~l~~~~~~gi-~~~-p~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 18 GSMHGRAYLLLHRDFCDLKENNYKGI-TAK-PVSED--MMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHCCTTE-EEE-ECSTT--SCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred CccChHHHHHHHHHHHHHHhCCCCCE-EEE-EcCCc--cccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 34556788999999999999999995 444 35667 559999999999999999999999999999999999999999
Q ss_pred cceeccccCCCceEE-eCCC--CCCcccEEec
Q 033475 88 RINMTCVNHETGVVL-FLFD--LNSVHLVFLA 116 (118)
Q Consensus 88 ~i~HPnV~~~~g~~c-~~L~--~~w~~~~~~~ 116 (118)
+||||||+..+|.|| ++|+ ++|+|.+++.
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~ 125 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLS 125 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHH
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHH
Confidence 999999933678777 9999 8999998764
No 33
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1e-34 Score=201.87 Aligned_cols=102 Identities=24% Similarity=0.350 Sum_probs=88.6
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccC--C-CCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecc
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDD--G-DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~--~-~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
..+.+||++|++++++++++|+.+....+ + +| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 3 ~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~n--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 3 SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMD--LQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEE--EEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCc--ccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 35678999999999999999975543222 1 36 7799999999999999999999999999999999999999999
Q ss_pred ceeccccCCCceEE-eCCCC--CCcccEEec
Q 033475 89 INMTCVNHETGVVL-FLFDL--NSVHLVFLA 116 (118)
Q Consensus 89 i~HPnV~~~~g~~c-~~L~~--~w~~~~~~~ 116 (118)
+|||||+. +|.|| ++|+. +|+|.+++.
T Consensus 81 i~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~ 110 (157)
T 2gjd_A 81 FYHPNVYP-SGTICLSILNEDQDWRPAITLK 110 (157)
T ss_dssp CCCTTBCT-TSBBCCGGGCTTTTCCTTCCHH
T ss_pred CccCCCCC-CCcEeeecccCCCCCCCCCcHH
Confidence 99999995 67777 99988 799997753
No 34
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.3e-35 Score=215.58 Aligned_cols=100 Identities=20% Similarity=0.374 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceecc
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 93 (118)
+.+||++|++++++++++|+ .+.+.++++ ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 3 a~~RL~kEl~~l~~~~~~gi-~~~p~~~~~--l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 79 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHI-TLEFVSESD--IHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 79 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTC-EECCCSSSS--CCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCE-EEEECCCcc--ccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCc
Confidence 57899999999999999885 555545545 569999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEE-eCCCCCCcccEEec
Q 033475 94 VNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 94 V~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|+..+|.|| ++|+++|+|.+++.
T Consensus 80 I~~~~G~ICL~iL~~~WsP~~ti~ 103 (215)
T 1tte_A 80 ISSVTGAICLDILRNAWSPVITLK 103 (215)
T ss_dssp SCSSSSCCCSSTTTCCSCTTCCHH
T ss_pred CcCCCCEEECccCCCCCCCcCcHH
Confidence 996478777 99999999998764
No 35
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.1e-34 Score=207.92 Aligned_cols=100 Identities=29% Similarity=0.474 Sum_probs=89.4
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|+++|++++++|+ .+. ++++| +++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi-~~~-p~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNC-SAG-PKGDN--IYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTE-EEE-ESSSC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCc-eee-cccCc--cccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 4478999999999999998885 544 35677 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.|| ++|.++|.|.+++.
T Consensus 123 PNV~~-~G~ICL~iL~~~WsP~~ti~ 147 (194)
T 3bzh_A 123 CNINS-QGVICLDILKDNWSPALTIS 147 (194)
T ss_dssp TTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred ceECC-CCceechhhhccCCCcCcHH
Confidence 99996 67777 99999999998754
No 36
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.3e-34 Score=208.35 Aligned_cols=101 Identities=24% Similarity=0.320 Sum_probs=88.2
Q ss_pred chHHHHHHHHHHHhHcCC---CCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecc
Q 033475 12 VPRNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~---~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
..+.+||+||+++++++. +.|+ .+.+ .++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 ~~a~~Rl~kEl~~l~~~~~~~~~~i-~~~~-~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 4 NIAVQRIKREFKEVLKSEETSKNQI-KVDL-VDEN--FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp CTTHHHHHHHHHHHHTCHHHHTTSE-EEEE-CSTT--SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCE-EEEE-CCCC--ccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 345789999999999873 5674 5443 4567 5699999999999999999999999999999999999999999
Q ss_pred ceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 89 INMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 89 i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||||||+..+|.+| ++|+++|+|.+++.
T Consensus 80 i~HPnv~~~~G~iCl~iL~~~W~p~~~i~ 108 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILKDQWAAAMTLR 108 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHH
T ss_pred cccCCCcCCCCeeeCcccccCCCCCCCHH
Confidence 99999996578888 99999999998764
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.1e-34 Score=202.95 Aligned_cols=105 Identities=22% Similarity=0.268 Sum_probs=87.9
Q ss_pred ccchHHHHHHHHHHHhHc-C-C------CC-C-ceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCC
Q 033475 10 VVVPRNFRLLEELERGEK-G-I------GD-G-TVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEK 79 (118)
Q Consensus 10 ~~~~~~kRl~kEl~~l~~-~-~------~~-~-~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~ 79 (118)
|+..+.+||++|++++++ + + +. | ++.+...+++| +++|+++|.||++|||+||.|+|+|.||++||++
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~n--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~ 80 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETD--LSKWEAIISGPSDTPYENHQFRILIEVPSSYPMN 80 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTC--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCc--hhEEEEEEECCCCCcccCCEEEEEEECCCcCCCC
Confidence 345678999999999998 4 2 22 3 23333236778 5599999999999999999999999999999999
Q ss_pred CCEEEEec-cceeccccCCCceEE-eCCC-CCCcccEEec
Q 033475 80 PPSVRFHS-RINMTCVNHETGVVL-FLFD-LNSVHLVFLA 116 (118)
Q Consensus 80 pP~v~f~t-~i~HPnV~~~~g~~c-~~L~-~~w~~~~~~~ 116 (118)
||+|+|.| +||||||+..+|.|| ++|+ ++|+|.+++.
T Consensus 81 PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~ 120 (172)
T 2y9m_A 81 PPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLL 120 (172)
T ss_dssp CCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHH
T ss_pred CCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHH
Confidence 99999999 999999975688888 9998 9999998764
No 38
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.5e-34 Score=213.10 Aligned_cols=105 Identities=23% Similarity=0.309 Sum_probs=91.3
Q ss_pred ccccchHHHHHHHHHHHhHcC---CCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEE
Q 033475 8 SSVVVPRNFRLLEELERGEKG---IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (118)
Q Consensus 8 s~~~~~~~kRl~kEl~~l~~~---~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 84 (118)
..++..+.+||++|+++|+++ ++.|+ .+.+ .++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+
T Consensus 52 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi-~v~p-~~dn--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 127 (253)
T 3e46_A 52 FDMANIAVQRIKREFKEVLKSEETSKNQI-KVDL-VDEN--FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 127 (253)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCHHHHTTSE-EEEE-CSTT--SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCCCE-EEEE-CCCc--ccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeee
Confidence 345667899999999999987 35674 4443 4567 569999999999999999999999999999999999999
Q ss_pred EeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 85 FHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 85 f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|.|+||||||+..+|.|| ++|.++|.|.+++.
T Consensus 128 F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~ 160 (253)
T 3e46_A 128 FITKIWHPNISSVTGAICLDILKDQWAAAMTLR 160 (253)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTTCCCTTCCHH
T ss_pred ecCCCccCCccCCCCeeecccccCCCCCCCCHH
Confidence 999999999996578887 99999999998764
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.7e-34 Score=200.33 Aligned_cols=99 Identities=19% Similarity=0.303 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.+||++|++++++++++|+ .+..++++| +++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i-~~~~~~~~~--l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYL-RNLSSDDAN--VLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHP 79 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTE-EEEEECSSC--TTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred hHHHHHHHHHHHHHhCCCCCE-EEEecCCCc--hheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccC
Confidence 457899999999999999885 443456778 559999999 9999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCC-CCCCcccEEec
Q 033475 93 CVNHETGVVL-FLF-DLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L-~~~w~~~~~~~ 116 (118)
||+. +|.+| ++| .++|+|.+++.
T Consensus 80 nV~~-~G~iCl~iL~~~~W~p~~~i~ 104 (155)
T 1wzv_A 80 NVDE-NGQICLPIISSENWKPCTKTC 104 (155)
T ss_dssp TBCT-TCBCCCGGGCTTTCCTTCCHH
T ss_pred cCCC-CCeEeecCCCccCCCCCCcHH
Confidence 9996 77777 999 89999998754
No 40
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-34 Score=199.23 Aligned_cols=98 Identities=13% Similarity=0.287 Sum_probs=86.1
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
..+.+||++|++++ ++++| +.+..++++| +++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~-~~~~~~~~~~--l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKT-CDISFSDPDD--LLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 78 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTT-EEEECSSTTC--TTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHhc--CCCCC-eEEEeccCCc--cceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCcc
Confidence 45789999999999 45667 4655567788 55999988 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+. +|.+| ++|+++|+|.+++.
T Consensus 79 Pnv~~-~G~iCl~iL~~~W~p~~~i~ 103 (160)
T 1y8x_A 79 PNIDL-EGNVCLNILREDWKPVLTIN 103 (160)
T ss_dssp TTBCT-TCBBCCGGGTTTCCTTCCHH
T ss_pred CcCCC-CCeEEcccchhhccCCCCHH
Confidence 99996 67777 99999999998764
No 41
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-34 Score=202.31 Aligned_cols=101 Identities=13% Similarity=0.274 Sum_probs=88.2
Q ss_pred cccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecc
Q 033475 9 SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 9 ~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
+.+..+.+||++|++++ ++++| +.+.+++++| ++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 22 ~~~~~~~~RL~kEl~~l--~~~~~-i~~~~p~~~n--l~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~ 95 (180)
T 2nvu_C 22 KKASAAQLRIQKDINEL--NLPKT-CDISFSDPDD--LLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM 95 (180)
T ss_dssp CSCCHHHHHHHHHHHTC--CCCTT-EEEECSSTTC--TTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred CCccHHHHHHHHHHHhc--CCCCC-eEEEeccccc--ccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceecc
Confidence 34566889999999999 45667 5666567788 55999998 9999999999999999999999999999999999
Q ss_pred ceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 89 INMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 89 i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
+|||||+. +|.+| ++|+++|.|.+++.
T Consensus 96 i~HPNV~~-~G~iCl~iL~~~W~p~~~i~ 123 (180)
T 2nvu_C 96 VYHPNIDL-EGNVALNILREDWKPVLTIN 123 (180)
T ss_dssp CCBTTBCT-TSBBCCGGGTTSCCTTCCHH
T ss_pred CccCCCCC-CCcEEcccccccCCCCCCHH
Confidence 99999996 67777 99999999998754
No 42
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=6.5e-34 Score=197.15 Aligned_cols=98 Identities=22% Similarity=0.336 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceecc
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 93 (118)
+.+||++|++++++++++|+.. ..++++| ++.|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~-~~~~~~~--l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRN-IQVDEAN--LLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEE-ECSSCSS--SSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-eeCCCCc--hheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 4579999999999999999643 3456778 559999998 99999999999999999999999999999999999999
Q ss_pred ccCCCceEE-eCCC-CCCcccEEec
Q 033475 94 VNHETGVVL-FLFD-LNSVHLVFLA 116 (118)
Q Consensus 94 V~~~~g~~c-~~L~-~~w~~~~~~~ 116 (118)
|+. +|.+| ++|. ++|+|.+++.
T Consensus 79 v~~-~G~iCl~iL~~~~W~p~~~i~ 102 (154)
T 1c4z_D 79 IDE-KGQVCLPVISAENWKPATKTD 102 (154)
T ss_dssp BCT-TCBBCCTTTSSSSCCTTCCHH
T ss_pred CCC-CCEEECCCCCCCCCCCCCcHH
Confidence 996 67777 9996 8999998753
No 43
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-34 Score=201.24 Aligned_cols=97 Identities=23% Similarity=0.234 Sum_probs=84.8
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEecccee
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 91 (118)
+.+.+||++|++++++++. ++ . .++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 11 ~~~~~RL~~El~~l~~~~~-~v---~--~~~~--l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 11 LRSNRRREMDYMRLCNSTR-KV---Y--PSDT--VAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp --CCHHHHHHHHHHHSSSS-CE---E--ECSS--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred ccHHHHHHHHHHHHHhCCC-CC---C--CCCC--ceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCccc
Confidence 3567999999999999873 32 2 3567 5599999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEE-eCCCCCCcccEEec
Q 033475 92 TCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 92 PnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|||+..+|.+| ++|+++|+|.+++.
T Consensus 83 PNi~~~~G~iCl~iL~~~W~p~~~i~ 108 (171)
T 1yf9_A 83 PNVDERSGSVCLDVINQTWTPMYQLE 108 (171)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTH
T ss_pred ccCcccCCeEeccccccCCCCCCcHH
Confidence 99996578888 99999999988753
No 44
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.9e-34 Score=201.34 Aligned_cols=100 Identities=22% Similarity=0.354 Sum_probs=87.3
Q ss_pred cchHHHHHHHHHHHhHcCC------------CCCceEEeccCCCCcceeEEEEEEECCCCCCCC--CcEEEEEEEccCCC
Q 033475 11 VVPRNFRLLEELERGEKGI------------GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE--GRIYQLKLFCDKDY 76 (118)
Q Consensus 11 ~~~~~kRl~kEl~~l~~~~------------~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~--gg~f~~~i~fp~~Y 76 (118)
+..+.|||++|++++++++ ..++ .+. ++++| +++|+++|.||++|||+ ||.|+++|.||++|
T Consensus 6 s~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i-~~~-~~~~n--l~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~Y 81 (167)
T 4ds2_A 6 KNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTA-IFS-VDTDT--IYNWILKVKAPADSVYGGAGNTYQLSVLFSDDY 81 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCE-EEE-EEESS--TTEEEEEEECCTTSGGGTTCCEEEEEEECCTTT
T ss_pred cHHHHHHHHHHHHHHHhCcccccccccccCCCCcE-EEE-eCCCc--ccEEEEEEECCCCCCccCCCCEEEEEEECCCCC
Confidence 3456789999999999976 5564 333 46678 55999999999999999 99999999999999
Q ss_pred CCCCCEEEEeccceeccccCCCceEE-eCCCCCCcccEEe
Q 033475 77 PEKPPSVRFHSRINMTCVNHETGVVL-FLFDLNSVHLVFL 115 (118)
Q Consensus 77 P~~pP~v~f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~ 115 (118)
|++||+|+|.|++|||||+ .+|.+| ++|+++|+|.+++
T Consensus 82 P~~pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i 120 (167)
T 4ds2_A 82 PHEPPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHA 120 (167)
T ss_dssp TTSCCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCH
T ss_pred CCCCCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCCh
Confidence 9999999999999999999 578777 9999999999874
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.98 E-value=6.7e-34 Score=196.89 Aligned_cols=95 Identities=20% Similarity=0.304 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceeccc
Q 033475 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (118)
Q Consensus 15 ~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 94 (118)
.|||+||+++++++ |+ .+.+ .++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~Rl~kEl~~l~~~---~~-~v~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 4 LTRKQCDFTKLIMA---GY-DLEL-NNGS--TQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp CCHHHHTHHHHHHH---TC-CEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHhcCcC---CC-EEEE-ccCc--cceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 46999999999885 43 3333 4567 6799999999999999999999999999999999999999999999999
Q ss_pred cCCCceEE-eCCCCCCcccEEec
Q 033475 95 NHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 95 ~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
+..+|.+| ++|+++|+|.+++.
T Consensus 77 ~~~~G~iCl~il~~~W~p~~~i~ 99 (152)
T 2onu_A 77 DEASGSVCLDVINQTWTPLYSLV 99 (152)
T ss_dssp CTTTCBBCHHHHHHHCCTTCCHH
T ss_pred cCcCCeEecccccccCCCCCCHH
Confidence 96578888 99999999987653
No 46
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=1.4e-32 Score=196.01 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=81.3
Q ss_pred CCCCCCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCC
Q 033475 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKP 80 (118)
Q Consensus 1 ~~~~~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~p 80 (118)
|++ ++.++++..+.+||++|+++|++++++|+ .+. ++++| +++|+++|.||++|||+||.|+++|.||++||++|
T Consensus 3 mss-~~~~~~~~~a~~RL~kEl~~l~~~~~~~i-~~~-p~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~P 77 (187)
T 2f4w_A 3 MSS-TSSKRAPTTATQRLKQDYLRIKKDPVPYI-CAE-PLPSN--ILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKP 77 (187)
T ss_dssp ------------CHHHHHHHHHHHHHHSCCTTE-EEE-EETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSC
T ss_pred CCc-cCCCCCccHHHHHHHHHHHHHHhCCCCCE-EEE-EcCCc--cceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCC
Confidence 443 33346667799999999999999999885 444 45667 67999999999999999999999999999999999
Q ss_pred CEEEEeccceeccccCCCceEE-eCC---CCCCcccEEec
Q 033475 81 PSVRFHSRINMTCVNHETGVVL-FLF---DLNSVHLVFLA 116 (118)
Q Consensus 81 P~v~f~t~i~HPnV~~~~g~~c-~~L---~~~w~~~~~~~ 116 (118)
|+|+|.|+ ||||++ +|.|| ++| .++|.|.+++.
T Consensus 78 P~v~f~T~--~~~~~~-~G~ICL~iL~~~~~~W~P~~ti~ 114 (187)
T 2f4w_A 78 PSIYMITP--NGRFKC-NTRLCLSITDFHPDTWNPAWSVS 114 (187)
T ss_dssp CEEEECSC--CSSBCT-TSCBC----------CCTTCCHH
T ss_pred CcccccCC--Cceecc-CCeEeeeccccCccCCCCcCcHH
Confidence 99999999 999996 56666 999 68999998764
No 47
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=2.4e-32 Score=195.14 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=87.4
Q ss_pred cccchHHHHHHHHHHHhHcCCCCCceEEec---cCCCCccee---EEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCE
Q 033475 9 SVVVPRNFRLLEELERGEKGIGDGTVSYGM---DDGDDIYMR---SWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPS 82 (118)
Q Consensus 9 ~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~---~~~~n~~l~---~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~ 82 (118)
.....+.+||++||++++ .+++ +.+.. ++++| ++ .|+++|. |++|||+||.|+++|.||++||++||+
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~-i~~~~~~~p~~~n--l~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~ 98 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPT-VTLNVITSPDSAD--RSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPK 98 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTT-EEEEEEECTTCCC--TTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCE
T ss_pred CCccHHHHHHHHHHHhcc--CCCC-EEEEecCCCCCcc--CCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCce
Confidence 344567899999999999 5566 45542 67778 66 9999997 788999999999999999999999999
Q ss_pred EEEeccceeccccCCCceEE-eCCCCCCcccEEec
Q 033475 83 VRFHSRINMTCVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 83 v~f~t~i~HPnV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
|+|.|++|||||+. +|.+| ++|+++|.|.+++.
T Consensus 99 v~f~t~i~HPnV~~-~G~iCl~iL~~~W~p~~~i~ 132 (190)
T 3o2u_A 99 VVCLKKIFHPNIDL-KGNVCLNILREDWSPALDLQ 132 (190)
T ss_dssp EEECSCCCCTTBCT-TSBBCCGGGTTTCCTTCCHH
T ss_pred eEEecCcccCCCCC-CCeEechhccCCCCCCCCHH
Confidence 99999999999995 77777 99999999988764
No 48
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.97 E-value=7e-33 Score=196.26 Aligned_cols=96 Identities=19% Similarity=0.303 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.|||+||+++++++ |+ .+.+. +| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 25 ~a~~RL~kEl~~l~~~---g~-~v~~~--dd--l~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HP 96 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIES---KH-EVTIL--GG--LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHP 96 (179)
T ss_dssp HHHHHHHHHHHHHHHS---SS-CEEEE--EE--TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHhcCcC---CC-EEEEC--CC--CceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccC
Confidence 4789999999999863 43 33433 45 45999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+..+|.+| ++|+++|+|.+++.
T Consensus 97 NV~~~~G~ICL~iL~~~WsP~~ti~ 121 (179)
T 2z5d_A 97 NIDEASGTVCLDVINQTWTALYDLT 121 (179)
T ss_dssp TBCTTTCBBCHHHHHHHCCTTCCTT
T ss_pred cCCCCCCeEeccccccCCCCCCCHH
Confidence 9996478887 99999999998754
No 49
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=6.4e-32 Score=211.11 Aligned_cols=99 Identities=28% Similarity=0.453 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccceec
Q 033475 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 92 (118)
.+.|||+||++++++++++|+ .+. +.++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~-~~~-p~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 78 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQC-SAG-PVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 78 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSE-EEE-EETTE--EEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCCE-EEE-EcCCc--ceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccc
Confidence 468999999999999999995 444 35667 67999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEE-eCCCCCCcccEEec
Q 033475 93 CVNHETGVVL-FLFDLNSVHLVFLA 116 (118)
Q Consensus 93 nV~~~~g~~c-~~L~~~w~~~~~~~ 116 (118)
||+. +|.+| ++|+++|+|.+++.
T Consensus 79 nv~~-~G~iCl~il~~~W~p~~~i~ 102 (399)
T 4ddg_A 79 NINS-NGSISLDILRSQWSPALTIS 102 (399)
T ss_dssp TBCT-TCBBCCGGGTTSCCTTCCHH
T ss_pred ccCC-CCeEeCcccccCCCccccHH
Confidence 9996 77777 99999999998764
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=6.8e-32 Score=192.25 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=88.4
Q ss_pred cccchHHHHHHHHHHHhHcCC---CCCceEEeccCCCCcceeEEEEEEECC-CCCCCCC-----------cEEEEEEEcc
Q 033475 9 SVVVPRNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGP-HNTVHEG-----------RIYQLKLFCD 73 (118)
Q Consensus 9 ~~~~~~~kRl~kEl~~l~~~~---~~~~~~~~~~~~~n~~l~~w~~~i~Gp-~~tpy~g-----------g~f~~~i~fp 73 (118)
.++..+.+||++||++|++++ +.+ +.+.+ .++| ++.|+++|.|| ++|||+| |.|+|+|.||
T Consensus 23 ~~s~~a~~RL~kEl~~l~~~~~~~~~~-~~~~p-~~dn--l~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp 98 (186)
T 1zuo_A 23 SGSVQASDRLMKELRDIYRSQSYKTGI-YSVEL-INDS--LYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFK 98 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHTTS-EEEEE-ETTE--EEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCc-EEEEE-cCCc--cceeEEEEECCCCCCCccccchhhccccCceEEEEEEECC
Confidence 345668899999999999987 455 55554 4567 67999999998 9999998 8999999999
Q ss_pred CCCCCCCCEEEEeccceec-cccCCCceEE-eCCC-CCCcccEEec
Q 033475 74 KDYPEKPPSVRFHSRINMT-CVNHETGVVL-FLFD-LNSVHLVFLA 116 (118)
Q Consensus 74 ~~YP~~pP~v~f~t~i~HP-nV~~~~g~~c-~~L~-~~w~~~~~~~ 116 (118)
++||++||+|+|.|++||| ||+. +|.|| ++|. ++|+|.+++.
T Consensus 99 ~~YP~~PP~V~f~tpi~hPnnV~~-~G~ICL~iL~~~~WsP~~ti~ 143 (186)
T 1zuo_A 99 DNFPFDPPFVRVVLPVLSGGYVLG-GGALCMELLTKQGWSSAYSIE 143 (186)
T ss_dssp TTTTSSCCEEEEEESCEESTTBCG-GGBBCCGGGSTTTCCTTSCHH
T ss_pred CCCCCCCCeEEEeCCccCCCccCC-CCcEEeccCCCCCCCCcCcHH
Confidence 9999999999999999999 6994 78777 9997 7899998764
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=201.92 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=89.0
Q ss_pred cccchHHHHHHHHHHHhHcCCCCCceE--EeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEe
Q 033475 9 SVVVPRNFRLLEELERGEKGIGDGTVS--YGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (118)
Q Consensus 9 ~~~~~~~kRl~kEl~~l~~~~~~~~~~--~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 86 (118)
.++..+.+||++|+++|++++++++.+ ...++++| ++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 72 ~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~edn--l~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 72 ANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEER--LDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSC--TTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCC--ccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 355678999999999999988776321 12246678 55999999999999999999999999999999999999999
Q ss_pred cc-----ceeccccCCCceEE-eCCC-------CCCcccE-Ee
Q 033475 87 SR-----INMTCVNHETGVVL-FLFD-------LNSVHLV-FL 115 (118)
Q Consensus 87 t~-----i~HPnV~~~~g~~c-~~L~-------~~w~~~~-~~ 115 (118)
|+ +||||||. +|.|| ++|+ ++|+|.+ ++
T Consensus 150 T~~g~~~ifHPNV~~-~G~ICLsiL~~~~g~~~e~WsPa~stI 191 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYN-DGKVCLSILNTWHGRPEEKWNPQTSSF 191 (323)
T ss_dssp CSTTTTCCCBTTBCT-TCBBCCGGGTSSCCCGGGSCCTTTCCH
T ss_pred ccCCCcccccCCCCc-CCeEechhhccccCCCcCCCCcCcCCH
Confidence 99 99999995 67777 9998 6999987 44
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.91 E-value=1.1e-26 Score=161.51 Aligned_cols=92 Identities=15% Similarity=0.101 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCc----------EEEEEEEccCCCCCCCCEE
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSV 83 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v 83 (118)
-.+||++|++.|++. ..++.+| ++.|.+++.||++|+|+|| .|+++++||++||++||+|
T Consensus 33 w~~RL~eE~k~L~k~--------v~p~k~n--~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 33 WVQRLKEEYQSLIRY--------VENNKNA--DNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHHT--TCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHH--------hccCccc--cceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 378999999999982 1234456 5599999999999999999 9999999999999999999
Q ss_pred EEecc-ceeccccCCCceEE-eCC-CC---CCcccEEec
Q 033475 84 RFHSR-INMTCVNHETGVVL-FLF-DL---NSVHLVFLA 116 (118)
Q Consensus 84 ~f~t~-i~HPnV~~~~g~~c-~~L-~~---~w~~~~~~~ 116 (118)
+|.++ +||||||. +|.|| ++| +. +|+|.+.++
T Consensus 103 ~F~~~~~~hpnmY~-~G~ICLdIL~kp~Ws~~~P~~~Ia 140 (172)
T 2z6o_A 103 AVPELDGKTAKMYR-GGKICLTDHFKPLWARNVPKFGLA 140 (172)
T ss_dssp BCGGGTTTCSSBCT-TSBBCCCTTHHHHHHHHTTSCCHH
T ss_pred eeCCCCCCCCCCCC-CCcEechhhccccccccCCccCHH
Confidence 99998 99999995 78777 999 43 444776553
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.73 E-value=2.9e-19 Score=122.09 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCc----------EEEEEEEccCCCCCCCCEE
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSV 83 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v 83 (118)
=..||+.|++.|-+- +... ...|| .|...+.||+||+|.|+ .|+++++||.+||..||+|
T Consensus 35 w~~RlkeEy~alI~y-----v~~n-K~~d~----dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 35 WTARLKEEYASLITY-----VEHN-KASDS----HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp HHHHHHHHHHHHHHH-----HHHH-HHTTC----CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHH-----HHhc-ccccC----CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 468999999988752 1211 23344 89999999999999999 9999999999999999999
Q ss_pred EEecc-ceeccccCCCceEE-eCCCCCCcccEEe
Q 033475 84 RFHSR-INMTCVNHETGVVL-FLFDLNSVHLVFL 115 (118)
Q Consensus 84 ~f~t~-i~HPnV~~~~g~~c-~~L~~~w~~~~~~ 115 (118)
+|.+. .+|||+| ++|.|| +++ |.|.+.-
T Consensus 105 ~Fp~ldgkt~kmY-r~GkICLdIh---wkPlW~~ 134 (168)
T 3kpa_A 105 ALPELEGKTVKMY-RGGKICMTTH---FFPLWAR 134 (168)
T ss_dssp BCGGGTTTCSSEE-TTTEECCCTT---HHHHHHH
T ss_pred ecccccCcCcccc-CCCcEEeccc---cchhhHh
Confidence 99995 8999999 588888 875 8887643
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.49 E-value=2.4e-14 Score=99.61 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=62.9
Q ss_pred HHHHHHHHHhHcCCC---CCceEEeccCCCCcceeEEEEEEECCCCCCCCCcE---EEEEEEccCCCCCCCCEEEEec--
Q 033475 16 FRLLEELERGEKGIG---DGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRI---YQLKLFCDKDYPEKPPSVRFHS-- 87 (118)
Q Consensus 16 kRl~kEl~~l~~~~~---~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t-- 87 (118)
+|..+|+..+-+.-+ +..-.+...|+. .++-+.+.|.-..+|+|+. |.+.|.||++||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~----~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t 106 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGT----PQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLEN 106 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSC----EEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGG
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCC----hheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCC
Confidence 566677776655322 111112333332 2455555555558999999 8899999999999999997755
Q ss_pred -----c---ce-eccccCCCceEE-eCCCCCCccc
Q 033475 88 -----R---IN-MTCVNHETGVVL-FLFDLNSVHL 112 (118)
Q Consensus 88 -----~---i~-HPnV~~~~g~~c-~~L~~~w~~~ 112 (118)
+ |+ |||||. +|.|| ++|+ +|++.
T Consensus 107 ~~m~~~~~~I~~hpnVD~-~G~I~lpyL~-~W~p~ 139 (162)
T 3r3q_A 107 FDMNTISSSLPIQEYIDS-NGWIALPILH-AWDPA 139 (162)
T ss_dssp CCTTTSCTTSTHHHHBCT-TSBBCCGGGG-SCCGG
T ss_pred ccccccccccCCCCCCCC-CCcEeCcccc-cCCCC
Confidence 1 77 999995 77777 9995 69984
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.25 E-value=1.8e-11 Score=83.79 Aligned_cols=59 Identities=25% Similarity=0.357 Sum_probs=51.3
Q ss_pred eeEEEEEEECCCCCCCCCcEEEE--EEEccCCCCCCCCEEEEecc------ceeccccCCCceEE-eCCCCCCcc
Q 033475 46 MRSWTGTIIGPHNTVHEGRIYQL--KLFCDKDYPEKPPSVRFHSR------INMTCVNHETGVVL-FLFDLNSVH 111 (118)
Q Consensus 46 l~~w~~~i~Gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnV~~~~g~~c-~~L~~~w~~ 111 (118)
|..|.++|. .+|+|+.|.+ .|-||++||++||.| |.++ .+|||||. +|.|| +.|++ |.+
T Consensus 53 LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL~~-W~~ 120 (146)
T 3obq_A 53 LMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYLHE-WKH 120 (146)
T ss_dssp EEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHHHT-CCT
T ss_pred EEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccccc-cCC
Confidence 789999998 5899999995 888999999999999 7766 58999995 77777 99965 987
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.12 E-value=0.004 Score=40.51 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
+....+...|+.-|+.--++.+ .. .+.+. ..+.+.|..-.+..-+.-.+.+.+.+|++||..||.+...+
T Consensus 9 ~~~~e~q~~EleaL~sIy~d~~-~~--~~~~~---~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 9 TDYGEEQRNELEALESIYPDSF-TV--LSENP---PSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCHHHHHHHHHHHHHHHCSSSE-EE--CCSSS---CEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CChHHHHHHHHHHHHHHccCce-EE--ccCCC---CEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3446678899999987444442 32 12211 25566555222212223478899999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.57 E-value=0.021 Score=36.99 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeccCC-CCcceeEEEEEEECCCCCCC--CCcEEEEEEEccCCCCCCCCEEEEecc
Q 033475 15 NFRLLEELERGEKGIGDGTVSYGMDDG-DDIYMRSWTGTIIGPHNTVH--EGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 15 ~kRl~kEl~~l~~~~~~~~~~~~~~~~-~n~~l~~w~~~i~Gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
..++..|+.-|+.--++.+ ....... .. -..+.+.+..+.+..- ..-.+.|.+.+|++||..+|.+...+.
T Consensus 10 ~e~~~~EleaL~SIY~de~-~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 10 DWVLPSEVEVLESIYLDEL-QVIKGNGRTS--PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CCHHHHHHHHHHHHSTTTE-EEECCTTSSC--CEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCce-EEecCCCCCC--CeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 3478899999987444443 3221111 12 2245555543222111 124788999999999999999987763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.079 Score=34.67 Aligned_cols=68 Identities=15% Similarity=0.019 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeccCC-------CCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEe
Q 033475 14 RNFRLLEELERGEKGIGDGTVSYGMDDG-------DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (118)
Q Consensus 14 ~~kRl~kEl~~l~~~~~~~~~~~~~~~~-------~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 86 (118)
...+...|+.-|+.--++.+ .. .+. +. -..+.+.|....+ .-..-.+.+.+.+|++||..||.|...
T Consensus 11 ~~e~q~~EleaL~SIY~d~~-~~--~~~~~~~~~~~~--~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~ 84 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDF-TD--LTKRKSSWDKQP--QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFK 84 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSE-EC--CSTTSSSSCSSC--CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEE
T ss_pred hHHHHHHHHHHHHHHChhhh-ee--cccccccccCCC--CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEe
Confidence 34567788888886433332 22 121 11 1266777763222 111347889999999999999999876
Q ss_pred c
Q 033475 87 S 87 (118)
Q Consensus 87 t 87 (118)
.
T Consensus 85 ~ 85 (138)
T 2yz0_A 85 N 85 (138)
T ss_dssp C
T ss_pred c
Confidence 5
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=96.11 E-value=0.051 Score=35.47 Aligned_cols=78 Identities=21% Similarity=0.195 Sum_probs=45.7
Q ss_pred CCCccccchHHHHHHHHHHHhHcCCCCCceEEeccCCCC---c-ceeEEEEEEECCCC-C-CCCCcEEEEEEEccCCCCC
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD---I-YMRSWTGTIIGPHN-T-VHEGRIYQLKLFCDKDYPE 78 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~~~~~~~~~~~~~~~n---~-~l~~w~~~i~Gp~~-t-py~gg~f~~~i~fp~~YP~ 78 (118)
++|+........+...|+.-|+.--++.+ ... +.+. . .-..+.+.+. +.+ . .-..-.+.|.+.||++||.
T Consensus 2 ~~~~~~~~~~~e~q~~EleaL~SIY~d~~-~~~--~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~ 77 (137)
T 1ukx_A 2 SSGSSGMESYSQRQDHELQALEAIYGSDF-QDL--RPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPD 77 (137)
T ss_dssp CCCSCCCCCHHHHHHHHHHHHHHHTSSSE-EEC--CCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTS
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHCcccc-eec--cCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCC
Confidence 44555555667788899998886433332 221 1110 0 0114555555 221 1 0012468899999999999
Q ss_pred CCCEEEEe
Q 033475 79 KPPSVRFH 86 (118)
Q Consensus 79 ~pP~v~f~ 86 (118)
.+|.|...
T Consensus 78 ~~P~i~l~ 85 (137)
T 1ukx_A 78 VVPEIDLK 85 (137)
T ss_dssp SCCCCEEE
T ss_pred CCCcEEEe
Confidence 99999874
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.77 E-value=0.073 Score=34.44 Aligned_cols=67 Identities=13% Similarity=0.045 Sum_probs=39.2
Q ss_pred HHHHHHHHhHcCCCC--CceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 17 RLLEELERGEKGIGD--GTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 17 Rl~kEl~~l~~~~~~--~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
+...|+.-|+.--+. .+ ........+ ...+.+.+.. .+..=..-.+.+.+.+|.+||..+|.+...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~-~~~~~~~~~--~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEW-EVLSRSETD--GTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTC-CCSEECSSS--CEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCce-EEecCCCCC--CCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 577888888763221 22 111001112 2367777763 2210012478999999999999999987654
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.10 E-value=0.16 Score=34.06 Aligned_cols=25 Identities=16% Similarity=0.075 Sum_probs=22.0
Q ss_pred cEEEEEEEccCCCCCCCCEEEEecc
Q 033475 64 RIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 64 g~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
..+.+.|.+|.+||..+|.+...+.
T Consensus 75 ~~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 75 VKIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEEECSSTTSSCCEEEEECS
T ss_pred ceEEEEEEcCCCCCCCCCcEEEEeC
Confidence 3799999999999999999987664
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.89 E-value=0.11 Score=34.63 Aligned_cols=25 Identities=20% Similarity=0.378 Sum_probs=21.5
Q ss_pred cEEEEEEEccCCCCCCCCEEEEecc
Q 033475 64 RIYQLKLFCDKDYPEKPPSVRFHSR 88 (118)
Q Consensus 64 g~f~~~i~fp~~YP~~pP~v~f~t~ 88 (118)
-.+.+.+.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=68.09 E-value=5.4 Score=27.73 Aligned_cols=60 Identities=18% Similarity=0.119 Sum_probs=41.9
Q ss_pred HHHHHHHHHhHcCCCCCceEEeccCCCCcceeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEeccc
Q 033475 16 FRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (118)
Q Consensus 16 kRl~kEl~~l~~~~~~~~~~~~~~~~~n~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 89 (118)
.+|.+|+.++-=+.. .. .+. + +...++.+.... |....+++.++.+||.++|.+...-|+
T Consensus 4 ~~li~Ei~~iGW~~l---~~---id~-~--~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~ 63 (186)
T 3zqs_A 4 SSLIEEIGTLGWDKL---VY---ADT-C--FSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV 63 (186)
T ss_dssp CSHHHHHHHHCGGGE---EE---ECT-T--SSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS
T ss_pred HHHHHHHHHhCCcee---ee---ecC-C--ccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC
Confidence 368888888733221 11 233 3 567788887443 689999999999999999987765553
No 64
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=49.74 E-value=12 Score=19.40 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=12.9
Q ss_pred chHHHHHHHHHHHhHc
Q 033475 12 VPRNFRLLEELERGEK 27 (118)
Q Consensus 12 ~~~~kRl~kEl~~l~~ 27 (118)
.+.++|+.+|++++.+
T Consensus 27 v~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 27 KSKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 3568999999998864
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=43.88 E-value=19 Score=16.38 Aligned_cols=20 Identities=30% Similarity=0.225 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHhHcCCCCC
Q 033475 13 PRNFRLLEELERGEKGIGDG 32 (118)
Q Consensus 13 ~~~kRl~kEl~~l~~~~~~~ 32 (118)
+.+.||.-|+...+.+++.|
T Consensus 5 seldrlllelnavqhnppsg 24 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSG 24 (26)
T ss_pred HHHHHHHHHHhhhccCCCCC
Confidence 34679999999999988866
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=40.77 E-value=26 Score=24.55 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.6
Q ss_pred CCcEEEEEEEccCCCCC-----CCCEEEEec
Q 033475 62 EGRIYQLKLFCDKDYPE-----KPPSVRFHS 87 (118)
Q Consensus 62 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 87 (118)
+.|.|.|+-.+|--||. +||-|+|..
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46899999999999998 899998863
No 67
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=38.59 E-value=83 Score=20.70 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=30.8
Q ss_pred eeEEE--EEEECCCCCCCC-CcEEEEEEEccCCCCCCCCEEEEeccce
Q 033475 46 MRSWT--GTIIGPHNTVHE-GRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (118)
Q Consensus 46 l~~w~--~~i~Gp~~tpy~-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 90 (118)
++.|. +-+.|+.+.... .-+=++...+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 68998 788998887553 456667777888887 47666665533
No 68
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=35.13 E-value=1.1e+02 Score=20.93 Aligned_cols=40 Identities=23% Similarity=0.338 Sum_probs=29.0
Q ss_pred eeEEEEEEECCCCCCCCCcEEEEEEEccCCCCCCCCEEEEec
Q 033475 46 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (118)
Q Consensus 46 l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 87 (118)
.+.|.+-+.|+.+.-...-+=++...+.+.||. |.-.+..
T Consensus 32 TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~ 71 (175)
T 3rls_A 32 THLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEA 71 (175)
T ss_dssp CEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECS
T ss_pred cEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeC
Confidence 789999999987654445567788888999974 5444443
No 69
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=31.77 E-value=88 Score=18.96 Aligned_cols=24 Identities=25% Similarity=0.192 Sum_probs=18.6
Q ss_pred CCCccccchHHHHHHHHHHHhHcC
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKG 28 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~ 28 (118)
+++|......+.+|++||++.-++
T Consensus 2 ~~~~~~~~~~l~~L~~~m~~~y~~ 25 (110)
T 2diq_A 2 SSGSSGRSLQLDKLVNEMTQHYEN 25 (110)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHTT
T ss_pred CCcchhHHHHHHHHHHHHHHHHcc
Confidence 566767777799999999986653
No 70
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=31.40 E-value=23 Score=21.53 Aligned_cols=15 Identities=7% Similarity=0.102 Sum_probs=12.3
Q ss_pred cchHHHHHHHHHHHh
Q 033475 11 VVPRNFRLLEELERG 25 (118)
Q Consensus 11 ~~~~~kRl~kEl~~l 25 (118)
+..-+||+++||+-|
T Consensus 60 ~LsQLKRvQRdlrGL 74 (87)
T 2rf4_B 60 SISQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhcCC
Confidence 566789999999865
No 71
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=29.88 E-value=96 Score=18.89 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=20.9
Q ss_pred CCcEEEEEEEccCCCCCCCCEEEEeccc
Q 033475 62 EGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (118)
Q Consensus 62 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i 89 (118)
.+..+...+.|+..|+ .+|+|.+.-..
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v~l~~ 53 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLLSITQ 53 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEEEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEEEeEE
Confidence 3457888899999999 49999876443
No 72
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=24.77 E-value=42 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=21.3
Q ss_pred CCcEEEEEEEccCCCC------------------CCCCEEEEe
Q 033475 62 EGRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (118)
Q Consensus 62 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 86 (118)
++|.|.|+-.+|--|| .+||-|+|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 3689999999999998 568888886
No 73
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=24.63 E-value=37 Score=15.85 Aligned_cols=14 Identities=29% Similarity=0.138 Sum_probs=8.5
Q ss_pred HHHHHHHHHHhHcC
Q 033475 15 NFRLLEELERGEKG 28 (118)
Q Consensus 15 ~kRl~kEl~~l~~~ 28 (118)
-|++.+|+-.|+++
T Consensus 12 KR~lLkeyY~L~~~ 25 (26)
T 2c5k_P 12 RRLLLREFYNLENX 25 (26)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHhhhcc
Confidence 45778888887753
No 74
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=24.44 E-value=44 Score=23.96 Aligned_cols=26 Identities=19% Similarity=0.471 Sum_probs=22.0
Q ss_pred CCcEEEEEEEccCCCC-------CCCCEEEEec
Q 033475 62 EGRIYQLKLFCDKDYP-------EKPPSVRFHS 87 (118)
Q Consensus 62 ~gg~f~~~i~fp~~YP-------~~pP~v~f~t 87 (118)
++|.|.|+-.+|--|| .+||-|+|..
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 3599999999999998 4799998864
No 75
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=24.10 E-value=45 Score=23.89 Aligned_cols=24 Identities=17% Similarity=0.333 Sum_probs=21.6
Q ss_pred CcEEEEEEEccCCCCC-------CCCEEEEe
Q 033475 63 GRIYQLKLFCDKDYPE-------KPPSVRFH 86 (118)
Q Consensus 63 gg~f~~~i~fp~~YP~-------~pP~v~f~ 86 (118)
+|.|.|+-.+|--||. +||-|+|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 5999999999999986 78999887
No 76
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=23.24 E-value=47 Score=24.74 Aligned_cols=24 Identities=21% Similarity=0.476 Sum_probs=21.1
Q ss_pred CcEEEEEEEccCCCC------------------CCCCEEEEe
Q 033475 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (118)
Q Consensus 63 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 86 (118)
.|.|.|+-.+|--|| .+||-|+|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 599999999999998 568999986
No 77
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=23.14 E-value=48 Score=24.50 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=21.3
Q ss_pred CCcEEEEEEEccCCCC------------------CCCCEEEEe
Q 033475 62 EGRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (118)
Q Consensus 62 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 86 (118)
+.|.|.|+-.+|--|| .+||-|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 3689999999999998 458988886
No 78
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=22.51 E-value=53 Score=22.79 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=20.8
Q ss_pred cEEEEEEEccCCCCCC-----CCEEEEe
Q 033475 64 RIYQLKLFCDKDYPEK-----PPSVRFH 86 (118)
Q Consensus 64 g~f~~~i~fp~~YP~~-----pP~v~f~ 86 (118)
|.|.|+-.+|--||.. ||-|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 8888876
No 79
>3t97_B Nuclear pore complex protein NUP54; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=22.38 E-value=38 Score=19.40 Aligned_cols=24 Identities=17% Similarity=0.004 Sum_probs=17.5
Q ss_pred CCCccccchHHHHHHHHHHHhHcC
Q 033475 5 SGGSSVVVPRNFRLLEELERGEKG 28 (118)
Q Consensus 5 ~~~s~~~~~~~kRl~kEl~~l~~~ 28 (118)
+.|......++..+.+|+.+|+++
T Consensus 2 ~~~t~~H~~~Ld~i~~el~eLq~~ 25 (65)
T 3t97_B 2 SHMTKQHQTRLDIISEDISELQKN 25 (65)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677888899999998864
No 80
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=21.95 E-value=52 Score=24.25 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=21.1
Q ss_pred CcEEEEEEEccCCCCC------------------CCCEEEEe
Q 033475 63 GRIYQLKLFCDKDYPE------------------KPPSVRFH 86 (118)
Q Consensus 63 gg~f~~~i~fp~~YP~------------------~pP~v~f~ 86 (118)
+|.|.|+-.+|--||. +||-|+|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 5999999999999994 68999886
No 81
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=21.60 E-value=53 Score=18.14 Aligned_cols=11 Identities=27% Similarity=0.461 Sum_probs=8.6
Q ss_pred EEEEccCCCCC
Q 033475 68 LKLFCDKDYPE 78 (118)
Q Consensus 68 ~~i~fp~~YP~ 78 (118)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46678999984
No 82
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=21.53 E-value=55 Score=23.64 Aligned_cols=24 Identities=13% Similarity=0.333 Sum_probs=20.5
Q ss_pred CcEEEEEEEccCCCC------------------CCCCEEEEe
Q 033475 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (118)
Q Consensus 63 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 86 (118)
+|.|.|+-.+|--|| .+||-|+|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 599999999999887 468988886
No 83
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=21.50 E-value=70 Score=14.72 Aligned_cols=14 Identities=29% Similarity=0.176 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHhHc
Q 033475 14 RNFRLLEELERGEK 27 (118)
Q Consensus 14 ~~kRl~kEl~~l~~ 27 (118)
..+||.+|.-.+.-
T Consensus 9 nvkrlekevgkleg 22 (28)
T 4dac_A 9 NVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhhhh
Confidence 46899999888764
No 84
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=21.26 E-value=64 Score=16.45 Aligned_cols=19 Identities=26% Similarity=0.302 Sum_probs=11.6
Q ss_pred ccccchHHHHHHHHHHHhH
Q 033475 8 SSVVVPRNFRLLEELERGE 26 (118)
Q Consensus 8 s~~~~~~~kRl~kEl~~l~ 26 (118)
|..+....+||.+|-.+-+
T Consensus 2 sels~~ekaRlrRERR~aK 20 (38)
T 3zs9_C 2 SELTEAEKRRLLRERRQKK 20 (38)
T ss_dssp --CCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHH
Confidence 3445566778888877644
No 85
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=20.55 E-value=57 Score=24.32 Aligned_cols=24 Identities=13% Similarity=0.483 Sum_probs=21.0
Q ss_pred CcEEEEEEEccCCCC------------------CCCCEEEEe
Q 033475 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (118)
Q Consensus 63 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 86 (118)
.|.|.|+-.+|--|| .+||-|+|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 499999999999997 468999886
Done!