BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033477
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1
Length = 89
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q AVLLFKSG
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAVLLFKSG 89
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster GN=ctp
PE=1 SV=1
Length = 89
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM E++Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM E++Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 62 FGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 72/91 (79%)
Query: 28 VSQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIV 87
++ + +IK+ADM E++Q +AVD A A EK ++EKD+A IKK+FD+KH PTWHCIV
Sbjct: 1 MASGSSKAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIV 60
Query: 88 GSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
G NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM +D+Q++A+D A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1
PE=3 SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64 SYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 74/89 (83%)
Query: 30 QSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S ++ +IK+ADM E++Q++A+ IA A +K+ +EKD+A IKKDFD+K+ PTWHCIVG
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKDFDRKYHPTWHCIVGR 60
Query: 90 NFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
+FGSYVTHET++F+YFYLD +A LLFKSG
Sbjct: 61 HFGSYVTHETHNFIYFYLDDRAFLLFKSG 89
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 69/86 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM ED+Q+ AV A AA +K +EKDVA IKK+FD+K+ P WHCIVG +FG
Sbjct: 4 RKAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGKHFG 63
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHET HF+YFYL ++A LLFKSG
Sbjct: 64 SYVTHETQHFIYFYLQERAFLLFKSG 89
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudG
PE=3 SV=1
Length = 94
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 37 IKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVT 96
IKS DM ED+Q+EAV++AI A EK +EKD+A+ IK++FD + G TWHC+VG NFGS+VT
Sbjct: 13 IKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFGSFVT 72
Query: 97 HETNHFVYFYLDQKAVLLFKS 117
HET HF+YFYL A+LLFK+
Sbjct: 73 HETKHFIYFYLGHCAILLFKT 93
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYV 95
+IK+ DM E +Q+EA+ A+ A EK ++EKD+A IK++FDKK PTWHCIVG NFGS+V
Sbjct: 3 VIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFV 62
Query: 96 THETNHFVYFYLDQKAVLLFKSG 118
THE+ HF+YFYL A LLFKSG
Sbjct: 63 THESRHFIYFYLGTVAFLLFKSG 85
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB
PE=3 SV=1
Length = 91
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Query: 31 SGKRII-IKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S K II +K+ADM + +Q++A + I AFE+ ++E+D+A IKK+FDKK+ PTWHCIVG
Sbjct: 3 SNKYIINVKNADMPDFMQQDATECTIKAFEETNIERDIAMIIKKEFDKKYSPTWHCIVGK 62
Query: 90 NFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
+FGS+VTHET +F+YF +++ +VLLFK+G
Sbjct: 63 SFGSFVTHETKNFIYFNINKHSVLLFKAG 91
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
K I+K++D+ ++L+ E I++ A E+ +E++VA IKK+ D KHG TWH IVG NFG
Sbjct: 3 KPAILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFG 62
Query: 93 SYVTHETNHFVYFYLDQKAVLLFKSG 118
SYVTHE HF+YFY+ A L+FK+
Sbjct: 63 SYVTHEKGHFIYFYIGPLAFLVFKTA 88
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 63/84 (75%)
Query: 34 RIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGS 93
++I+K++DM +++Q+E IA A ++++E+++A IKK+ D ++G TWH IVG +FGS
Sbjct: 3 QVIVKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGS 62
Query: 94 YVTHETNHFVYFYLDQKAVLLFKS 117
YVTHE FVYFY+ A+L+FK+
Sbjct: 63 YVTHEKGKFVYFYVGPLALLVFKT 86
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DYN2 PE=3 SV=1
Length = 91
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%)
Query: 28 VSQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIV 87
+S+ + I+K++D+ E++Q +++ A +EKD+A +KK+ D+ +G TWH IV
Sbjct: 1 MSEKEQEPILKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIV 60
Query: 88 GSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
G +FGSYVTHE F YFY+ Q A L+FKSG
Sbjct: 61 GKSFGSYVTHEQGFFTYFYIGQLAFLIFKSG 91
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYV 95
I+K++D+ + L+++ + I+ A +K +E+D+A +KK D K+G TWH IVG NFGSYV
Sbjct: 10 IVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYV 69
Query: 96 THETNHFVYFYLDQKAVLLFKSG 118
THE HFVYFY+ A L+FK+
Sbjct: 70 THEKGHFVYFYIGPLAFLVFKTA 92
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYV 95
++K++D+ ++L+ E +++ A +E+++A IKK D G TWH IVG NFGSYV
Sbjct: 5 VLKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYV 64
Query: 96 THETNHFVYFYLDQKAVLLFKSG 118
THE +FVYFY+ A L+FK+
Sbjct: 65 THEKGYFVYFYIGPLAFLVFKTA 87
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 30 QSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S ++I +K DM++ + + + A +++KDVA +K++ DKK G TWH I G
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGK 60
Query: 90 NFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
FGS V++E HF+ ++ V+++K G
Sbjct: 61 CFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 9/96 (9%)
Query: 29 SQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPT------ 82
SQ +II ++ M E +++AV IA+ A +K KD+A IK ++DKK+ +
Sbjct: 17 SQHFYKII--TSYMPESFEQDAVQIALIAVDKYRQLKDIAFYIKHEYDKKYPGSGKATEG 74
Query: 83 -WHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKS 117
+HCIVG +F S V+HET F++ +D V+L+KS
Sbjct: 75 VYHCIVGKSFASAVSHETRQFIHMKVDTYHVILWKS 110
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFGSY 94
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 95 VTHETNHFVYFYLDQK-AVLLFKS 117
+THE + +Y Y AV ++K
Sbjct: 81 ITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFGSY 94
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 95 VTHETNHFVYFYLDQK-AVLLFKS 117
+THE + +Y Y AV ++K
Sbjct: 81 ITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFGSY 94
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 95 VTHETNHFVYFYLDQK-AVLLFKS 117
+THE + +Y Y AV ++K
Sbjct: 81 ITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFGSY 94
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 95 VTHETNHFVYFYLDQK-AVLLFKS 117
+THE + +Y Y AV ++K
Sbjct: 81 ITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|Q8K9T4|MURG_BUCAP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=murG PE=3 SV=1
Length = 354
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 66 DVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
D+ IK+ F + GP I+G + G+ + ++ + F+L +KA++ +SG
Sbjct: 166 DIPPPIKR-FKNRKGPLRILIIGGSQGASIFNKILPKISFFLQEKAIIWHQSG 217
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 44 EDLQKEAVDIAIAAFEKNSVEKDVAERIKKDF--DKKHGPT 82
E+ VDI I A +NS+ K+VAE IK + +GPT
Sbjct: 286 EEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPT 326
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1
SV=1
Length = 368
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 61 NSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNH 101
N+ + D + + D D+ P WHC+V G + H
Sbjct: 32 NNRKDDKLHKKRGDSDEDLSPIWHCVVSGGIGGKIGDSAMH 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,173,096
Number of Sequences: 539616
Number of extensions: 1493489
Number of successful extensions: 4329
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 4285
Number of HSP's gapped (non-prelim): 63
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)