BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033478
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65426|LOL2_ARATH Protein LOL2 OS=Arabidopsis thaliana GN=LOL2 PE=2 SV=1
Length = 155
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 63/72 (87%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
E AQMVCGSCRRLL+Y RG++HVKCS CQTVN VLEA+QVGQV C +C +LLMYPYGAP+
Sbjct: 57 EKAQMVCGSCRRLLSYLRGSKHVKCSSCQTVNLVLEANQVGQVNCNNCKLLLMYPYGAPA 116
Query: 89 VRCSSCCFVTEI 100
VRCSSC VT+I
Sbjct: 117 VRCSSCNSVTDI 128
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 21 LTLTCYHQEMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQ 67
+ L ++ Q+ C +C+ LL YP GA V+CS C +V + E ++
Sbjct: 87 VNLVLEANQVGQVNCNNCKLLLMYPYGAPAVRCSSCNSVTDISENNK 133
>sp|Q704V3|LOL5_ORYSJ Protein LOL5 OS=Oryza sativa subsp. japonica GN=LOL5 PE=2 SV=1
Length = 163
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 27 HQEMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGA 86
++E+ QMVCGSCR LLAY RGA +V C+CCQT+N+VLEAH+VG+V C CA LLMYP+GA
Sbjct: 65 NKEVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFGA 124
Query: 87 PSVRCSSCCFVTEIG 101
P+V+CS C FVTEIG
Sbjct: 125 PAVKCSLCLFVTEIG 139
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 28 QEMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLE 64
E+ ++ CG C LL YP GA VKCS C V + E
Sbjct: 104 HEVGKVHCGHCATLLMYPFGAPAVKCSLCLFVTEIGE 140
>sp|Q93ZB1|LOL1_ARATH Protein LOL1 OS=Arabidopsis thaliana GN=LOL1 PE=2 SV=1
Length = 154
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
EMAQ+VCG C LL Y RGA V+CSCC TVN LEA+QV V C +C +LLMY YGA S
Sbjct: 70 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARS 129
Query: 89 VRCSSCCFVTEIG 101
V+C+ C FVT +G
Sbjct: 130 VKCAVCNFVTSVG 142
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 70 QVKCASCAVLLMYPYGAPSVRCSSCCFVTEIGVCGLSLFLCMCD 113
Q+ C+ C LLMYP GA SV C+ C VT + G + +C
Sbjct: 34 QLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCG 77
>sp|Q0J7V9|LSD1_ORYSJ Protein LSD1 OS=Oryza sativa subsp. japonica GN=LSD1 PE=2 SV=1
Length = 184
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
EMAQ+VCG C LL Y RGA V+CSCC TVN +EA+QV V C +C +LLMY YGA S
Sbjct: 101 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARS 160
Query: 89 VRCSSCCFVTEIG 101
V+C+ C FVT +G
Sbjct: 161 VKCAVCNFVTSVG 173
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 70 QVKCASCAVLLMYPYGAPSVRCSSCCFVTEIGVCGLSLFLCMC 112
Q+ C+ C LLMYP GA SV C+ C VT + G + +C
Sbjct: 65 QLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVC 107
>sp|Q6ASS2|LOL3_ORYSJ Protein LOL3 OS=Oryza sativa subsp. japonica GN=LOL3 PE=2 SV=1
Length = 186
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
EMA ++CG CR LL Y R A V+CSCC TVN V + + V C C LMYPYGAPS
Sbjct: 42 EMAHLICGGCRTLLMYTRNADTVRCSCCSTVNLVRPVNNIAHVSCGQCRTTLMYPYGAPS 101
Query: 89 VRCSSCCFVTEIGV 102
V+C+ C ++T G+
Sbjct: 102 VKCAICHYITNTGM 115
>sp|Q2QMB3|LOL2_ORYSJ Protein LOL2 OS=Oryza sativa subsp. japonica GN=LOL2 PE=2 SV=1
Length = 172
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
++A ++CG CR LL Y R A V+CSCC TVN V + + C C +LMYPYGAPS
Sbjct: 41 DIAHLICGGCRTLLMYTRNATSVRCSCCDTVNLVRPVSSIAHLNCGQCQTVLMYPYGAPS 100
Query: 89 VRCSSCCFVTEIGV 102
V+C+ C F+T G+
Sbjct: 101 VKCAICNFITNTGM 114
>sp|P94077|LSD1_ARATH Protein LSD1 OS=Arabidopsis thaliana GN=LSD1 PE=1 SV=1
Length = 189
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 11/85 (12%)
Query: 28 QEMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAH----------QVGQVKCASCA 77
+MA ++CG CR +L Y RGA V+CSCCQT N V AH QV Q+ C C
Sbjct: 46 HDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLV-PAHSNQVAHAPSSQVAQINCGHCR 104
Query: 78 VLLMYPYGAPSVRCSSCCFVTEIGV 102
LMYPYGA SV+C+ C FVT + +
Sbjct: 105 TTLMYPYGASSVKCAVCQFVTNVNM 129
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 32 QMVCGSCRRLLAYPRGARHVKCSCCQTVNFV---LEAHQVGQVKCASCAVLLMYPYGAPS 88
Q+VC CR LL YPRGA +V+C+ C T+N V H + + C C +LMY GA S
Sbjct: 9 QLVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASS 68
Query: 89 VRCSSCCFVTEI 100
VRC SCC T +
Sbjct: 69 VRC-SCCQTTNL 79
>sp|Q84UR0|LOL4_ORYSJ Protein LOL4 OS=Oryza sativa subsp. japonica GN=LOL4 PE=2 SV=1
Length = 147
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 29 EMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPS 88
+M++++C C LL Y RGA +++C C +N A+Q+ + C C LM+P GA +
Sbjct: 41 DMSELICSGCPTLLFYNRGASNIRCPSCNRLNSTRSANQIAHLTCGQCRTTLMHPPGAST 100
Query: 89 VRCSSCCFVTEI 100
V+C++C +V +
Sbjct: 101 VQCATCRYVNHV 112
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 21 LTLTCYHQEMAQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAH 66
L T ++A + CG CR L +P GA V+C+ C+ VN V +A
Sbjct: 71 LNSTRSANQIAHLTCGQCRTTLMHPPGASTVQCATCRYVNHVRDAR 116
>sp|Q69UP7|LOL1_ORYSJ Protein LOL1 OS=Oryza sativa subsp. japonica GN=LOL1 PE=2 SV=1
Length = 147
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 31 AQMVCGSCRRLLAYPRGARHVKCSCCQTVNFVLEAHQ 67
+Q+VC CR LL YP GA + C+ C TV V Q
Sbjct: 46 SQLVCSGCRNLLMYPAGATSICCAVCGTVTAVPAPEQ 82
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 65 AHQVG---QVKCASCAVLLMYPYGAPSVRCSSCCFVTEI 100
+H +G Q+ C+ C LLMYP GA S+ C+ C VT +
Sbjct: 39 SHSLGAQSQLVCSGCRNLLMYPAGATSICCAVCGTVTAV 77
>sp|Q7XJE6|MCA1_ARATH Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1 SV=1
Length = 367
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 35 CGSCRRLLAYPRGARHVKCSCCQTVNFVLE 64
C CR L P GAR ++C+ CQ V + +
Sbjct: 18 CSGCRTPLQLPSGARSIRCALCQAVTHIAD 47
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 71 VKCASCAVLLMYPYGAPSVRCSSCCFVTEIG 101
V C+ C L P GA S+RC+ C VT I
Sbjct: 16 VNCSGCRTPLQLPSGARSIRCALCQAVTHIA 46
>sp|A6NNT2|CP096_HUMAN Putative uncharacterized protein C16orf96 OS=Homo sapiens GN=C16orf96
PE=5 SV=3
Length = 1141
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 71 VKCASCAVLLMYPYGAPSVRCSSCCFVTEIGVCGL 105
+KC SC +L +YPYG P V V +GV G+
Sbjct: 986 LKCKSCNLLTLYPYGDPHVIDYDSAEVDILGVDGI 1020
>sp|Q8G9P0|MERB_PSEPU Alkylmercury lyase OS=Pseudomonas putida GN=merB PE=3 SV=1
Length = 212
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 53 CSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYGAPSVRCSSCCFV 97
+ + + + V QV+ A V L+ P +P +RCS CC V
Sbjct: 121 VATGRPITLTVAPEAVLQVEPAETMVSLLTPDASPDIRCSFCCHV 165
>sp|O94275|MUG30_SCHPO Probable E3 ubiquitin-protein ligase mug30 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug30 PE=1 SV=1
Length = 807
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 35 CGSCRRLLAYPRGARHVKCSCCQTVN---FVLEAHQV 68
C C +L YP A +CS C TVN F L Q+
Sbjct: 83 CICCNSVLRYPAQAMCFRCSLCMTVNDVYFCLSGSQI 119
>sp|Q7XJE5|MCA2_ARATH Metacaspase-2 OS=Arabidopsis thaliana GN=AMC2 PE=1 SV=1
Length = 418
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 35 CGSCRRLLAYPRGARHVKCSCCQTVNFV 62
C SCR L P GA ++C+ C +
Sbjct: 7 CSSCRTPLHLPPGATRIRCAICHAFTLI 34
>sp|P15533|TR30A_MOUSE Tripartite motif-containing protein 30A OS=Mus musculus
GN=Trim30a PE=1 SV=2
Length = 496
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 32 QMVCGSCRRLLAYPRGA--RHVKCSCCQTVNFVLEAHQVGQVKCASCAVLLMYPYG 85
++ C C LL P A H C C T+N+ + G+ C C V YP+G
Sbjct: 12 EVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRV--PYPFG 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.134 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,520,715
Number of Sequences: 539616
Number of extensions: 1308141
Number of successful extensions: 3221
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3166
Number of HSP's gapped (non-prelim): 46
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)