BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033480
(118 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Mg2+ At 1.9 A Resolution
pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Plp
Length = 306
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRL 102
>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase With Its Substrate
Length = 298
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRL 102
>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
Length = 298
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRL 102
>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|B Chain B, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|C Chain C, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|D Chain D, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
Length = 284
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
++K D FGVL PG +T + L G +++N + R+ + D LG
Sbjct: 13 KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGL 72
Query: 88 DPSLFAGAITSGELTHQYL 106
I+SG +T +Y+
Sbjct: 73 FSITADKIISSGXITKEYI 91
>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
From Thermotoga Maritima At 2.40 A Resolution
Length = 271
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS-NSSRRASTTIDKLKSLGF 87
+ + ++LD G + PG++ LE L + V + NSS A + KL++ G
Sbjct: 16 KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 75
Query: 88 DPSLFAGAITSGELTHQYLLR 108
D A +TSGE+T ++ L+
Sbjct: 76 DVPDDA-VVTSGEITAEHXLK 95
>pdb|1PW5|A Chain A, Putative Nagd Protein
Length = 253
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS-NSSRRASTTIDKLKSLGF 87
+ + ++LD G + PG++ LE L + V + NSS A + KL++ G
Sbjct: 4 KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 63
Query: 88 DPSLFAGAITSGELTHQYLLR 108
D A +TSGE+T ++ L+
Sbjct: 64 DVPDDA-VVTSGEITAEHXLK 83
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 34/55 (61%)
Query: 56 EMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRLI 110
+MLA + + ++ IS + + + +D++KS G++ S +AG ++ E + + +++
Sbjct: 62 KMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 116
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLKSLGFD 88
K +++D GV+ P P + ++ L G K++ +SN+S R+ +++L+S G +
Sbjct: 9 KGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 137
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 81 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 135
>pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5
pdb|2YBD|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Phosphate
pdb|3R09|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Mg
Length = 205
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR 74
AWLL+ L G +P PGA+ + LA G ++ +++ ++R
Sbjct: 56 AWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARE 98
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 25 AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLK 83
A R KA L+D G LH PGA L+ L T + ++N+++ +++LK
Sbjct: 2 AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVXVRFVTNTTKETKKDLLERLK 61
Query: 84 SLGFDPS---LFAGAITSGELTHQYLLR 108
L F+ S +F + L Q +R
Sbjct: 62 KLEFEISEDEIFTSLTAARNLIEQKQVR 89
>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
pdb|1ZJJ|B Chain B, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
Length = 263
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDPS 90
A + D GVL+ G + PG +E L G ++N+S + +KL +G D S
Sbjct: 3 AIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVS 62
Query: 91 LFAGAITSGELTHQYL 106
+ ITSG T Y+
Sbjct: 63 -SSIIITSGLATRLYM 77
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid
Dehalogenase-Like Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid
Dehalogenase-Like Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS 90
+ L FD S
Sbjct: 61 RKLEFDIS 68
>pdb|3KC2|A Chain A, Crystal Structure Of Mitochondrial Had-Like Phosphatase
From Saccharomyces Cerevisiae
pdb|3KC2|B Chain B, Crystal Structure Of Mitochondrial Had-Like Phosphatase
From Saccharomyces Cerevisiae
Length = 352
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ D GVL GKKP GA L++L ++++N S RA
Sbjct: 3 GKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 62
Query: 77 T 77
T
Sbjct: 63 T 63
>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase
From Streptococcus Agalactiae
Length = 264
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82
+K +L+D G ++ GK P +E L G ++++N++ R ++ ++
Sbjct: 5 YKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEM 57
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G +++G + A + L G + V +NSSR DKL S
Sbjct: 4 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 61
Query: 87 FD-PSLFAGAITSGELTHQYL 106
FD P+ T+ T Q++
Sbjct: 62 FDIPATEEQVFTTSMATAQHI 82
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 31/59 (52%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
++ +L+D G ++ GK+P P +E L + ++N++ ++ T+ + + FD
Sbjct: 5 YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFD 63
>pdb|3SF0|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D64n Complexed With 5'amp
Length = 262
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 49 PGAISTLEMLATTGAKMVVISN--SSRRASTTIDKLKSLGFD 88
PGA+ + + K+ ++N S S TID +K LGF+
Sbjct: 104 PGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145
>pdb|3OCU|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With Nmn
pdb|3OCV|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 5'-Amp
pdb|3OCW|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 3'-Amp
pdb|3OCX|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 2'-Amp
Length = 262
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 49 PGAISTLEMLATTGAKMVVISN--SSRRASTTIDKLKSLGFD 88
PGA+ + + K+ ++N S S TID +K LGF+
Sbjct: 104 PGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145
>pdb|3OCY|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Complexed With Inorganic Phosphate
pdb|3OCZ|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Complexed With The Inhibitor Adenosine
5-O-Thiomonophosphate
Length = 262
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 49 PGAISTLEMLATTGAKMVVISN--SSRRASTTIDKLKSLGFD 88
PGA+ + + K+ ++N S S TID +K LGF+
Sbjct: 104 PGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145
>pdb|1ZCZ|A Chain A, Crystal Structure Of
Phosphoribosylaminoimidazolecarboxamide
Formyltransferase IMP CYCLOHYDROLASE (TM1249) FROM
THERMOTOGA Maritima At 1.88 A Resolution
pdb|1ZCZ|B Chain B, Crystal Structure Of
Phosphoribosylaminoimidazolecarboxamide
Formyltransferase IMP CYCLOHYDROLASE (TM1249) FROM
THERMOTOGA Maritima At 1.88 A Resolution
Length = 464
Score = 28.5 bits (62), Expect = 0.96, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG 86
P+P +LE+LA G K VV S R I+K + LG
Sbjct: 415 PFP---DSLEILAQAGVKAVVAPLGSIRDEEVIEKARELG 451
>pdb|3RF6|A Chain A, Crystal Structure Of Glycerol-3 Phosphate Bound Had-Like
Phosphatase From Saccharomyces Cerevisiae
pdb|3RF6|B Chain B, Crystal Structure Of Glycerol-3 Phosphate Bound Had-Like
Phosphatase From Saccharomyces Cerevisiae
Length = 355
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ GVL GKKP GA L++L ++++N S RA
Sbjct: 6 GKRFFQTTSKKIAFAFAIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 65
Query: 77 T 77
T
Sbjct: 66 T 66
>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From
Streptococcus Pyogenes
Length = 254
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82
+K +L+D G ++ GK P ++ L G ++++N++ R + +
Sbjct: 3 YKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSM 55
>pdb|3LR1|A Chain A, The Crystal Structure Of The Tungstate Abc Transporter
From Geobacter Sulfurreducens
Length = 236
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 51 AISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
A L++LAT GA + + S + +D KS G DP
Sbjct: 104 AAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGVDP 142
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 56 EMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRL 109
E LA GA++++ R + T+ + +++G D A +TS + RL
Sbjct: 44 EGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARL 97
>pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
pdb|2HI0|B Chain B, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
Length = 240
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 47 PYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFDPSL 91
P+PG + + L G K+ V+SN A +++L FD +L
Sbjct: 111 PFPGILDLXKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFAL 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,141,013
Number of Sequences: 62578
Number of extensions: 101320
Number of successful extensions: 340
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 316
Number of HSP's gapped (non-prelim): 31
length of query: 118
length of database: 14,973,337
effective HSP length: 81
effective length of query: 37
effective length of database: 9,904,519
effective search space: 366467203
effective search space used: 366467203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)