BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033480
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1
Length = 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77
Query: 88 ----DPSLFAGAITSGELTHQYLL 107
LF+ A+ + L Q LL
Sbjct: 78 GGLRSEQLFSSALCAARLLRQRLL 101
>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2
Length = 296
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77
Query: 88 D----PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 78 GGLRAEQLFSSALCAARLLRQRL 100
>sp|Q00472|PNPP_SCHPO 4-nitrophenylphosphatase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=pho2 PE=4 SV=2
Length = 298
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT 78
+F +L D GVL G KP PG T+++L + G +++ +SN+S ++ T
Sbjct: 17 KFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRET 66
>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1
Length = 292
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF----D 88
L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 23 LFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRA 82
Query: 89 PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 83 EQLFSSALCAARLLRQRL 100
>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1
SV=2
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGFD---- 88
L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 23 LFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTGLRA 82
Query: 89 PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 83 EELFSSAVCAARLLRQRL 100
>sp|Q2T9S4|PGP_BOVIN Phosphoglycolate phosphatase OS=Bos taurus GN=PGP PE=2 SV=1
Length = 321
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS-NSSRRAS 76
LN R A L D GVL G+ PGA TL L G ++ I+ NSS+
Sbjct: 16 LNAERAQALLADVDTLLFDCDGVLWRGETAVPGAPETLTALRARGKRLAFITNNSSKTRE 75
Query: 77 TTIDKLKSLGF 87
+KL+ LGF
Sbjct: 76 AYAEKLRCLGF 86
>sp|Q8CHP8|PGP_MOUSE Phosphoglycolate phosphatase OS=Mus musculus GN=Pgp PE=2 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
L D GVL G+ PGA TL L G ++ I+N+S + T +KL+ LGF
Sbjct: 32 LFDCDGVLWRGETAVPGAPETLRALRARGKRLGFITNNSSKTRTAYAEKLRRLGF 86
>sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans
GN=K02D10.1 PE=2 SV=4
Length = 526
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVI--SNSSRRASTTIDKLKSLGF 87
+ +L D GVL G P PGAI + +L +K V + +NS++ + K++ LGF
Sbjct: 15 YDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKKIEKLGF 74
>sp|Q3ZCH9|HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Bos taurus GN=HDHD2 PE=2 SV=1
Length = 259
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MATRRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLRLII 111
K L FD S +F + L Q +R ++
Sbjct: 61 KKLEFDISEDEIFTSLTAARNLVEQKQVRPML 92
>sp|Q5BJJ5|HDHD2_DANRE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Danio rerio GN=hdhd2 PE=2 SV=1
Length = 262
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLG 86
R KA L+D G LH PGA L L + ++N+++ T+ ++L+ L
Sbjct: 5 RTLKAVLIDLSGTLHIEDTAVPGAQEALARLRQAPVAVKFVTNTTKECKRTLFERLRGLN 64
Query: 87 FD---PSLFAGAITSGELTHQYLLR--LIIASSVIKD 118
FD +F + L Q +R L++ S ++D
Sbjct: 65 FDLQQQEIFTSLTAARNLVEQKAVRPLLMVEDSALED 101
>sp|Q3UGR5|HDHD2_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Mus musculus GN=Hdhd2 PE=1 SV=2
Length = 259
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLRLII 111
K L F+ S +F + L Q +R ++
Sbjct: 61 KKLEFEISEDEIFTSLTAARNLIEQKQVRPML 92
>sp|Q5R4B4|HDHD2_PONAB Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Pongo abelii GN=HDHD2 PE=2 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGTSVIVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS 90
+ L FD S
Sbjct: 61 RKLEFDIS 68
>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5)
GN=gph PE=1 SV=1
Length = 213
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 81 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 135
>sp|Q9A5Z2|GPH_CAUCR Phosphoglycolate phosphatase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=gph PE=3 SV=1
Length = 237
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI 79
+ D P+PG + L L T GAK+VV +N ST +
Sbjct: 91 IADESAPFPGVVEVLSDLKTAGAKLVVCTNKLTNLSTAL 129
>sp|Q6AYR6|HDHD2_RAT Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Rattus norvegicus GN=Hdhd2 PE=2 SV=1
Length = 259
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAARRVLKAVLVDLSGTLHIEDAAVPGAQEALKRLRAASVMVRFVTNTTKESKRDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLRLII 111
+ L FD S +F + L Q +R ++
Sbjct: 61 RKLEFDISEEEIFTSLTAARNLIEQRQVRPML 92
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 26 ETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK 83
ET A ++ + H + YPG + TL+ L G +M +I+N R + +D++K
Sbjct: 81 ETEAALALFMEAYADSHALTEVYPGVVDTLKWLKRNGVEMALITNKPERFVAPLLDEMK 139
>sp|Q9H0R4|HDHD2_HUMAN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Homo sapiens GN=HDHD2 PE=1 SV=1
Length = 259
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS 90
+ L FD S
Sbjct: 61 RKLEFDIS 68
>sp|Q8A0U2|TPIS_BACTN Triosephosphate isomerase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=tpiA PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 48 YPGAISTLEMLATTGAKMVVISNSSRRA 75
Y G +S EM+A+TGAK V++ +S RRA
Sbjct: 75 YTGEVSA-EMVASTGAKYVILGHSERRA 101
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFD 88
F +L D GV++ G + PGA+ LE L + G + ++N+ T +L LG +
Sbjct: 6 FDVFLFDLDGVIYVGPEALPGAVEALERLRSGGKTIRFLTNNPCMTREQTAARLNRLGIE 65
Query: 89 PS 90
+
Sbjct: 66 AA 67
>sp|Q8UEY9|GPH_AGRT5 Phosphoglycolate phosphatase OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=gph PE=3 SV=2
Length = 233
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
+PYPG I TL+ L+ G + V +N + + + L+ LG + + AIT G+
Sbjct: 94 RPYPGIIETLDALSQAGITLAVCTNKTEILAVPL--LEKLGL--TRYFAAITCGD 144
>sp|Q2SK73|PSRP_HAHCH Putative phosphoenolpyruvate synthase regulatory protein OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_02122 PE=3 SV=1
Length = 272
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 6 SVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKM 65
+ N P +F T+ AE R+ + +++D FG + + G+ ST T G
Sbjct: 58 EIDGNKPVIFDTIVNSEIRAEIRKSQGYMIDIFGTFLEPLEQELGSKSTY----TVGKSH 113
Query: 66 VVISNSS 72
++SNSS
Sbjct: 114 SIVSNSS 120
>sp|Q7A1D4|NAGD_STAAW Protein NagD homolog OS=Staphylococcus aureus (strain MW2)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q6GAZ7|NAGD_STAAS Protein NagD homolog OS=Staphylococcus aureus (strain MSSA476)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q7A6K4|NAGD_STAAN Protein NagD homolog OS=Staphylococcus aureus (strain N315)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q99VE8|NAGD_STAAM Protein NagD homolog OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=nagD PE=1 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q5HHF6|NAGD_STAAC Protein NagD homolog OS=Staphylococcus aureus (strain COL)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q2FZX0|NAGD_STAA8 Protein NagD homolog OS=Staphylococcus aureus (strain NCTC 8325)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q2FIE5|NAGD_STAA3 Protein NagD homolog OS=Staphylococcus aureus (strain USA300)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|P36151|YK50_YEAST Uncharacterized protein YKR070W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YKR070W PE=1 SV=1
Length = 352
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ D GVL GKKP GA L++L ++++N S RA
Sbjct: 3 GKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 62
Query: 77 T 77
T
Sbjct: 63 T 63
>sp|Q6GIF9|NAGD_STAAR Protein NagD homolog OS=Staphylococcus aureus (strain MRSA252)
GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|Q2YWR1|NAGD_STAAB Protein NagD homolog OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=nagD PE=3 SV=1
Length = 259
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FD 88
D
Sbjct: 62 ID 63
>sp|A6KXL2|TPIS_BACV8 Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482
/ DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1
Length = 251
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 48 YPGAISTLEMLATTGAKMVVISNSSRRA 75
Y G +S EM+A+TGA+ V++ +S RRA
Sbjct: 75 YTGEVSA-EMVASTGAEYVILGHSERRA 101
>sp|P19881|PNPP_YEAST 4-nitrophenylphosphatase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PHO13 PE=1 SV=2
Length = 312
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRAS-TTIDKLKSLGF 87
++ +L D GVL G + P + L +L G +++ ++N+S ++ K S G
Sbjct: 23 KYDTFLFDCDGVLWLGSQALPYTLEILNLLKQLGKQLIFVTNNSTKSRLAYTKKFASFGI 82
Query: 88 D 88
D
Sbjct: 83 D 83
>sp|A6LFF0|TPIS_PARD8 Triosephosphate isomerase OS=Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1
Length = 251
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRA 75
K Y G +S M+A+TGAK V++ +S RRA
Sbjct: 72 KGAYTGEVSAA-MVASTGAKYVILGHSERRA 101
>sp|Q3K5U8|GPH_PSEPF Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain
Pf0-1) GN=Pfl01_5119 PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK 83
++ +G H+ YPG TL+ L G M +I+N R + +D++K
Sbjct: 89 FMEAYGASHELTVVYPGVRDTLKWLHKQGVAMALITNKPERFVAPLLDQMK 139
>sp|Q49W68|NAGD_STAS1 Protein NagD homolog OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=nagD
PE=3 SV=1
Length = 259
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+ +KA+L+D G ++ G + GA + L + V +NS++ KL ++G
Sbjct: 2 KNYKAYLIDLDGTMYKGNEEIDGAAQFISYLNNQNIPHLYVTNNSTKEPEEVASKLNTMG 61
Query: 87 F 87
Sbjct: 62 I 62
>sp|Q64P83|TPIS_BACFR Triosephosphate isomerase OS=Bacteroides fragilis (strain YCH46)
GN=tpiA PE=3 SV=1
Length = 251
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 48 YPGAISTLEMLATTGAKMVVISNSSRRA--STTIDKLK 83
Y G +S M+A+TGAK V++ +S RRA T++ LK
Sbjct: 75 YTGEVSAA-MVASTGAKYVILGHSERRAYYGETVEILK 111
>sp|Q5L923|TPIS_BACFN Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC
25285 / NCTC 9343) GN=tpiA PE=3 SV=1
Length = 251
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 48 YPGAISTLEMLATTGAKMVVISNSSRRA--STTIDKLK 83
Y G +S M+A+TGAK V++ +S RRA T++ LK
Sbjct: 75 YTGEVSAA-MVASTGAKYVILGHSERRAYYGETVEILK 111
>sp|O32125|YUTF_BACSU Uncharacterized hydrolase YutF OS=Bacillus subtilis (strain 168)
GN=yutF PE=1 SV=1
Length = 256
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G +++G + A + L G + V +NSSR DKL S
Sbjct: 2 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 59
Query: 87 FD-PSLFAGAITSGELTHQYL 106
FD P+ T+ T Q++
Sbjct: 60 FDIPATEEQVFTTSMATAQHI 80
>sp|A6NDG6|PGP_HUMAN Phosphoglycolate phosphatase OS=Homo sapiens GN=PGP PE=1 SV=1
Length = 321
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKM-VVISNSSRRASTTIDKLKSL 85
L D GVL G+ PGA L L G ++ + +NSS+ + +KL+ L
Sbjct: 32 LFDCDGVLWRGETAVPGAPEALRALRARGKRLGFITNNSSKTRAAYAEKLRRL 84
>sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440)
GN=PP_0416 PE=3 SV=1
Length = 272
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK 83
A +D + H+ YPG TL L G +M +I+N R +D++K
Sbjct: 87 ALFMDAYAESHELTVVYPGVRDTLRWLRKQGVEMALITNKPERFVGPLLDQMK 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,836,794
Number of Sequences: 539616
Number of extensions: 1337237
Number of successful extensions: 3876
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3853
Number of HSP's gapped (non-prelim): 44
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)