BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033482
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2
SV=1
Length = 122
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 111/122 (90%), Gaps = 4/122 (3%)
Query: 1 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
MAY MKPTK GLE EQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP
Sbjct: 1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
Query: 61 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIA 116
TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSSPD ITSITIEPGVEVEVTIA
Sbjct: 61 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120
Query: 117 DS 118
DS
Sbjct: 121 DS 122
>sp|P49200|RS201_ARATH 40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=1
SV=2
Length = 124
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/121 (90%), Positives = 110/121 (90%), Gaps = 4/121 (3%)
Query: 2 AYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 61
AY MKP K GLEE EQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT
Sbjct: 4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63
Query: 62 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIAD 117
KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSSPD ITSITIEPGVEVEVTIAD
Sbjct: 64 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123
Query: 118 S 118
S
Sbjct: 124 S 124
>sp|P35686|RS20_ORYSJ 40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20
PE=2 SV=2
Length = 128
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 105/122 (86%), Gaps = 5/122 (4%)
Query: 1 MAYAA-MKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRM 59
+AYA MK K G E +QE H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRM
Sbjct: 6 VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRM 65
Query: 60 PTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTI 115
PTKVLHITTRKSPCGEGTNTWDRFE+RVHKRVIDL SS D ITSITIEPGVEVEVTI
Sbjct: 66 PTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTI 125
Query: 116 AD 117
+D
Sbjct: 126 SD 127
>sp|P60868|RS20_RAT 40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1
Length = 119
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|P60867|RS20_MOUSE 40S ribosomal protein S20 OS=Mus musculus GN=Rps20 PE=1 SV=1
Length = 119
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|Q4R5D0|RS20_MACFA 40S ribosomal protein S20 OS=Macaca fascicularis GN=RPS20 PE=3 SV=1
Length = 119
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|P60866|RS20_HUMAN 40S ribosomal protein S20 OS=Homo sapiens GN=RPS20 PE=1 SV=1
Length = 119
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|Q3ZBH8|RS20_BOVIN 40S ribosomal protein S20 OS=Bos taurus GN=RPS20 PE=3 SV=1
Length = 119
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|P23403|RS20_XENLA 40S ribosomal protein S20 OS=Xenopus laevis GN=rps20 PE=1 SV=1
Length = 119
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 91/103 (88%), Gaps = 4/103 (3%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ T
Sbjct: 17 IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKT 76
Query: 80 WDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
WDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 77 WDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|Q5R924|RS20_PONAB 40S ribosomal protein S20 OS=Pongo abelii GN=RPS20 PE=3 SV=1
Length = 119
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 4/118 (3%)
Query: 5 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVL 64
A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61
Query: 65 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
ITT K+PCGEG+ TWDRF++R+HKR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 62 RITTGKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|A1XQU9|RS20_PIG 40S ribosomal protein S20 OS=Sus scrofa GN=RPS20 PE=3 SV=1
Length = 119
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 92/108 (85%), Gaps = 4/108 (3%)
Query: 15 EAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCG 74
E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L ITTRK+PCG
Sbjct: 12 EPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCG 71
Query: 75 EGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
EG+ TWDRF++R+ KR+IDL S + ITSI+IEPGVEVEVTIAD+
Sbjct: 72 EGSKTWDRFQMRIPKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>sp|P55828|RS20_DROME 40S ribosomal protein S20 OS=Drosophila melanogaster GN=RpS20 PE=1
SV=1
Length = 120
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 95/121 (78%), Gaps = 5/121 (4%)
Query: 1 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
MA A KP + ++ +H+IRITL+S+NV++LE VC DL+ GAK++ LRVKGPVRMP
Sbjct: 1 MAAAPKDIEKPHVGDSA-SVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMP 59
Query: 61 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIA 116
TK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL S + ITSI IEPGVEVEVTIA
Sbjct: 60 TKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIA 119
Query: 117 D 117
+
Sbjct: 120 N 120
>sp|O74893|RS20_SCHPO 40S ribosomal protein S20 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps20 PE=1 SV=1
Length = 118
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 87/102 (85%), Gaps = 4/102 (3%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+H+IRITL+S+NV+NLEKVC+DLV AKDK+LRVKGPVR+PTK+L ITTRK+P GEG+ T
Sbjct: 17 VHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRKTPNGEGSKT 76
Query: 80 WDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIAD 117
W+ +E+R+HKR+IDL S + ITSI IEPGVEVEVTIA
Sbjct: 77 WETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIAQ 118
>sp|Q54Y41|RS20_DICDI 40S ribosomal protein S20 OS=Dictyostelium discoideum GN=rps20 PE=3
SV=1
Length = 124
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 5 AMKPTKPGLEE-AQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKV 63
+M P K E A ++KI ITL+S+N K+LEKVC D++ AK+K+++ KGP+R+P KV
Sbjct: 2 SMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNKKVKAKGPIRIPNKV 61
Query: 64 LHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD----ITSITIEPGVEVEV 113
L ITTRKSPCGEGTNTWDRFE+R+HKRVI + S+ D + +I+IE GV+VEV
Sbjct: 62 LKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISIEAGVDVEV 115
>sp|Q08068|RS20_MAIZE 40S ribosomal protein S20 (Fragment) OS=Zea mays GN=RPS20 PE=3
SV=1
Length = 60
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 36 EKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDL 94
EKVC DLV+GAKDK LRVKGPVR+PTKVLHITTRKSPCGEGTNTWDRFE R+HKRVIDL
Sbjct: 1 EKVCADLVKGAKDKHLRVKGPVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDL 59
>sp|P38701|RS20_YEAST 40S ribosomal protein S20 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS20 PE=1 SV=3
Length = 121
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Query: 24 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRF 83
RITL+S VK LE V +++V+ A+ L KGPVR+PTKVL I+TRK+P GEG+ TW+ +
Sbjct: 23 RITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLPTKVLKISTRKTPNGEGSKTWETY 82
Query: 84 ELRVHKRVIDLFSSPD----ITSITIEPGVEVEVTIADS 118
E+R+HKR IDL + IT ITIEPGV+VEV +A +
Sbjct: 83 EMRIHKRYIDLEAPVQIVKRITQITIEPGVDVEVVVASN 121
>sp|B6YVG1|RS10_THEON 30S ribosomal protein S10 OS=Thermococcus onnurineus (strain NA1)
GN=rps10 PE=3 SV=1
Length = 102
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+S N+K L +V + + A+ +R+ GP+ +PTK + ITTRKSP GEGT T
Sbjct: 1 MQKARIKLASTNIKALNEVTDQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DRFELRVHKR++D+
Sbjct: 61 FDRFELRVHKRLVDI 75
>sp|C5A5P5|RS10_THEGJ 30S ribosomal protein S10 OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps10 PE=3 SV=1
Length = 102
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+S N+K L +V + + A+ +R+ GP+ +PTK + ITTRKSP GEGT T
Sbjct: 1 MQKARIKLASTNIKALNEVTDQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DRFELRVHKR++D+
Sbjct: 61 FDRFELRVHKRLVDI 75
>sp|Q5JFZ5|RS10_PYRKO 30S ribosomal protein S10 OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rps10 PE=3 SV=1
Length = 102
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 55/75 (73%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+S N+K L +V + + A+ +R+ GP+ +PTK + ITTRKSP GEG+ T
Sbjct: 1 MQKARIKLASTNIKALNEVTDQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DRFELRVHKR++D+
Sbjct: 61 FDRFELRVHKRLVDI 75
>sp|Q9V0V6|RS10_PYRAB 30S ribosomal protein S10 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps10 PE=3 SV=1
Length = 102
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+S NV++LE+V + + A+ +R+ GP+ +PTK + I TRKSP GEG+ T
Sbjct: 1 MQKARIKLASTNVRSLEEVANQIKQIAERTGVRMSGPIPLPTKRIRIVTRKSPDGEGSAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DR+ELR+HKR+ID+
Sbjct: 61 FDRWELRIHKRLIDI 75
>sp|O59152|RS10_PYRHO 30S ribosomal protein S10 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps10 PE=3 SV=1
Length = 102
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+S NV++LE+V + + A+ +R+ GP+ +PTK + I TRKSP GEG+ T
Sbjct: 1 MQKARIKLASTNVRSLEEVANQIRQIAERTGVRMSGPIPLPTKRIRIVTRKSPDGEGSAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DR+ELR+HKR+ID+
Sbjct: 61 FDRWELRIHKRLIDI 75
>sp|P61886|RS10_PYRWO 30S ribosomal protein S10 OS=Pyrococcus woesei GN=rps10 PE=3 SV=1
Length = 102
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI ++S NV++L++V + + A+ +R+ GP+ +PTK + ITTRKSP GEG+ T
Sbjct: 1 MQKARIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DR+ELRVHKR+ID+
Sbjct: 61 FDRWELRVHKRLIDI 75
>sp|P61885|RS10_PYRFU 30S ribosomal protein S10 OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps10 PE=1 SV=1
Length = 102
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI ++S NV++L++V + + A+ +R+ GP+ +PTK + ITTRKSP GEG+ T
Sbjct: 1 MQKARIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSAT 60
Query: 80 WDRFELRVHKRVIDL 94
+DR+ELRVHKR+ID+
Sbjct: 61 FDRWELRVHKRLIDI 75
>sp|Q979T2|RS10_THEVO 30S ribosomal protein S10 OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps10 PE=3 SV=1
Length = 104
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 21 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTW 80
+K RI+LS K ++ VC+++ A + + GP+ +PTK L + RKSP GEGTNTW
Sbjct: 4 YKARISLSGTEHKIVDMVCSEIKEIASRTGVEIHGPMPLPTKKLVVPVRKSPDGEGTNTW 63
Query: 81 DRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
D +E+R+HKR+ID+ + + I I GV++E+ I
Sbjct: 64 DHWEMRIHKRLIDVDADERTLRQLMRIPIPDGVQIEIQI 102
>sp|P28079|RS10_THEAC 30S ribosomal protein S10 OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps10 PE=3 SV=1
Length = 104
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 21 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTW 80
+K RI+LS + +++VC ++ A + + GP+ +PTK L + RKSP GEGTNTW
Sbjct: 4 YKARISLSGTEHRVVDRVCNEIKEIASRTGVEIHGPMPLPTKRLVVPVRKSPDGEGTNTW 63
Query: 81 DRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
D +E+R+HKR+ID+ + + I I GV++E+ I
Sbjct: 64 DHWEMRIHKRLIDVDADERTLRQLMRIPIPDGVQIEIQI 102
>sp|Q6L201|RS10_PICTO 30S ribosomal protein S10 OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps10
PE=3 SV=1
Length = 103
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
++K RI+LS K ++ VC ++ AK + + GP+ +PTK L + RKSP GEG+ T
Sbjct: 2 VYKARISLSGTENKIVDVVCEEIKGIAKRTGVEIHGPIPLPTKRLVVPVRKSPDGEGSPT 61
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
WDR+E+RVHKR+ID+ + + I+I GV +E+ I
Sbjct: 62 WDRWEMRVHKRLIDVDADERTLRQLMRISIPDGVRIEIQI 101
>sp|A0RUM5|RS10_CENSY 30S ribosomal protein S10 OS=Cenarchaeum symbiosum (strain A)
GN=rps10 PE=3 SV=1
Length = 102
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 24 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRF 83
R+ L+S N+ L+ VC ++ K +R+KGP +P K LHI TRKSPCG GT T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 84 ELRVHKRVIDL 94
E+R+H+R+ID+
Sbjct: 66 EMRMHRRIIDI 76
>sp|B1L712|RS10_KORCO 30S ribosomal protein S10 OS=Korarchaeum cryptofilum (strain OPF8)
GN=rps10 PE=3 SV=1
Length = 103
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 23 IRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDR 82
+RI L S N ++LEKV A +RVKGP+ +PTK L +T ++P GEGTN +D+
Sbjct: 5 LRIELVSVNPESLEKVSRMFKEIADKMGVRVKGPIPLPTKRLRVTALRNPSGEGTNRYDK 64
Query: 83 FELRVHKRVIDLFSSPD------ITSITIEPGVEVEVTI 115
+ELR+HKR+ID+ +PD I IT+ V++ + +
Sbjct: 65 YELRIHKRIIDI-PNPDERYIRSIMGITLPDDVKISIVL 102
>sp|P61930|RS10_METMA 30S ribosomal protein S10 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps10 PE=3 SV=1
Length = 102
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT T
Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTAT 60
Query: 80 WDRFELRVHKRVIDLFS 96
WD +E+RVHKR+ID+ +
Sbjct: 61 WDHWEMRVHKRLIDIAA 77
>sp|Q464Z5|RS10_METBF 30S ribosomal protein S10 OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=rps10 PE=3 SV=1
Length = 102
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT T
Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTAT 60
Query: 80 WDRFELRVHKRVIDLFS 96
WD +E+RVHKR+ID+ +
Sbjct: 61 WDHWEMRVHKRLIDIAA 77
>sp|P61929|RS10_METAC 30S ribosomal protein S10 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps10 PE=3
SV=1
Length = 102
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT T
Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTAT 60
Query: 80 WDRFELRVHKRVIDLFS 96
WD +E+RVHKR+ID+ +
Sbjct: 61 WDHWEMRVHKRLIDIAA 77
>sp|A3CTG2|RS10_METMJ 30S ribosomal protein S10 OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps10 PE=3 SV=1
Length = 102
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LS + + +E VC + A+ + + GP+ +PTK L + TRKSP GEGT T
Sbjct: 1 MQKARIRLSGTDFEKIEMVCDRIKEIAERTGVNLAGPIPLPTKKLVVPTRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
WDR+++RVHKR+ID+
Sbjct: 61 WDRWQMRVHKRLIDI 75
>sp|B9LRD9|RS10_HALLT 30S ribosomal protein S10 OS=Halorubrum lacusprofundi (strain
ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps10
PE=3 SV=1
Length = 102
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ + R+ L+ + ++L+ +C D+ A + + GP+ +PTK L I +RKSP GEGT T
Sbjct: 1 MQQARVRLAGTSPEDLDDICADVREIADSTGVALSGPIPLPTKTLEIPSRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
W+ +E+RVHKR+ID+
Sbjct: 61 WEHWEMRVHKRLIDI 75
>sp|P23357|RS10_HALMA 30S ribosomal protein S10 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps10 PE=3
SV=3
Length = 103
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 21 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTW 80
+ R+ L+ + ++L+ +C D+ A + + GPV +PTK L + +RKSP GEGT TW
Sbjct: 3 QQARVRLAGTSPEDLDDICADVREIANKTGVELSGPVPLPTKTLEVPSRKSPDGEGTATW 62
Query: 81 DRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTIAD 117
+ +E+RVHKR+ID+ + + I + V +E+ + D
Sbjct: 63 EHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIVLED 103
>sp|A2STE9|RS10_METLZ 30S ribosomal protein S10 OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+ + + +E VCT + A+ + + GP+ +PTK L + RKSP GEGT T
Sbjct: 1 MQKARIRLTGTDYEKVETVCTRIREIAERTGVNMAGPIPLPTKRLIVPIRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
WDR+++RVHKR+IDL
Sbjct: 61 WDRWQMRVHKRLIDL 75
>sp|A6UV42|RS10_META3 30S ribosomal protein S10 OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LSS + + L+ VC ++ A+ + + GP+ +PTK L +TTRKS GEG+++
Sbjct: 1 MQKARIKLSSTSYQELDGVCNNIKTIAEKTGVDMAGPIPLPTKTLKVTTRKSTDGEGSSS 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
+DR+ +RVHKRVID+ + I I I V++E+ +
Sbjct: 61 FDRWTMRVHKRVIDIEADERTMKHIMKIRIPEAVQIEIEL 100
>sp|P48854|RS10_HALSA 30S ribosomal protein S10 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ + R+ L+ + +L+ +C ++ A ++V GPV +PTK L + +RKSP GEGT T
Sbjct: 1 MQQARVRLAGVDPDDLDNICGEVQEIADKTGVKVSGPVPLPTKTLEVPSRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTIAD 117
W+ +E+RVHKR+ID+ + + I + V +E+ + D
Sbjct: 61 WEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVNIEIVLED 102
>sp|B0R8C2|RS10_HALS3 30S ribosomal protein S10 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ + R+ L+ + +L+ +C ++ A ++V GPV +PTK L + +RKSP GEGT T
Sbjct: 1 MQQARVRLAGVDPDDLDNICGEVQEIADKTGVKVSGPVPLPTKTLEVPSRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTIAD 117
W+ +E+RVHKR+ID+ + + I + V +E+ + D
Sbjct: 61 WEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVNIEIVLED 102
>sp|P54029|RS10_METJA 30S ribosomal protein S10 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps10 PE=3 SV=2
Length = 101
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ + RI LSS + K L+++C + A+ + + GP+ +PTKVL + TRKSP GEG++T
Sbjct: 1 MQRARIKLSSTDHKVLDEICRQIKEIAEKTGVDISGPIPLPTKVLRVVTRKSPDGEGSST 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEV 113
+DR+ +++HKR+ID+ + I I I V++E+
Sbjct: 61 FDRWTMKIHKRLIDIDADERALRHIMKIRIPDNVQIEI 98
>sp|Q3IUD7|RS10_NATPD 30S ribosomal protein S10 OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ + R+ L+ ++L+ +C D+ A + + GPV +PTK L I RKSP GEGT T
Sbjct: 1 MQQARVRLAGTAPEDLDDICDDVREIADKTGVTLSGPVPLPTKTLEIPARKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTIAD 117
W+ +E+RVHKR+ID+ + + I + V +E+ + D
Sbjct: 61 WEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIVLED 102
>sp|A9A3J7|RS10_NITMS 30S ribosomal protein S10 OS=Nitrosopumilus maritimus (strain
SCM1) GN=rps10 PE=3 SV=1
Length = 102
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 52/71 (73%)
Query: 24 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRF 83
R+ L+S ++ L+ VC +++ K ++VKGP +P K LH+ TRKSPCG GT T++++
Sbjct: 6 RVKLTSTSLPKLDGVCGEIMGIGKKTGVKVKGPTPLPVKRLHVATRKSPCGNGTETYEKW 65
Query: 84 ELRVHKRVIDL 94
E+++H+R+I++
Sbjct: 66 EMKMHRRIINI 76
>sp|Q2FRI1|RS10_METHJ 30S ribosomal protein S10 OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps10 PE=3 SV=1
Length = 102
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+ + + +E+VC + A+ + + GP+ +PT+ L + RKSP GEGT T
Sbjct: 1 MQKARIRLTGTDYQKVEEVCEKIKEIAERTGVNLAGPIPLPTRKLVVPIRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
WDR+++RVHKR+IDL
Sbjct: 61 WDRWQMRVHKRLIDL 75
>sp|Q12WT4|RS10_METBU 30S ribosomal protein S10 OS=Methanococcoides burtonii (strain
DSM 6242) GN=rps10 PE=3 SV=1
Length = 103
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 21 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTW 80
K RI LS + NL+ VC + A + + GPV +PTK L + RKSP G+GT TW
Sbjct: 3 QKARIRLSGTSPVNLDGVCDQVKAIANRTGVSISGPVPLPTKKLVVPVRKSPSGDGTATW 62
Query: 81 DRFELRVHKRVIDLFS 96
D +E+RVHKR+ID+ +
Sbjct: 63 DHWEMRVHKRLIDIAA 78
>sp|A0B7D7|RS10_METTP 30S ribosomal protein S10 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps10 PE=3 SV=1
Length = 102
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRG-AKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTN 78
+ K RI LS N L+++C VRG A+ + + GP+ +PTK L + RKSP GEG+
Sbjct: 1 MQKARIRLSGTNPATLDEICNQ-VRGIAQRTGVHMAGPIPLPTKRLVVPCRKSPDGEGSA 59
Query: 79 TWDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
TWD +E+RVHKR+IDL + + I + V +E+ +
Sbjct: 60 TWDHWEMRVHKRLIDLDADERALRQLMRIQVPKNVNIEIVL 100
>sp|Q8TYP7|RS10_METKA 30S ribosomal protein S10 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps10 PE=3 SV=1
Length = 102
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%)
Query: 21 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTW 80
++R+ LSS + LE+VC + + ++ ++ GP+ +PTK L + TRKSP GEG TW
Sbjct: 3 QEVRLRLSSTDHYKLEEVCERIKKVVEETGAQMSGPIPLPTKRLLVPTRKSPDGEGKATW 62
Query: 81 DRFELRVHKRVIDL 94
D++E+R+HKR+ID+
Sbjct: 63 DKWEMRIHKRLIDI 76
>sp|O27133|RS10_METTH 30S ribosomal protein S10 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps10 PE=3 SV=1
Length = 102
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 12/99 (12%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+HK RI L+ + + L VC L + A+ + + GP+ +PTK L + TRKSP GEGT T
Sbjct: 1 MHKARIKLTGTDPEKLAYVCDQLKKIAERTGVDMSGPIPLPTKRLVVPTRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL------------FSSPDITSITIE 106
W+++E+R+HKR++ + + PD SI IE
Sbjct: 61 WEKWEMRIHKRLVGIEADERAMRQVMKVNVPDNVSIEIE 99
>sp|O29324|RS10_ARCFU 30S ribosomal protein S10 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps10 PE=3 SV=1
Length = 106
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWD 81
K RI LS N + L+++C+ + A + + GPV +PT+ + + RK+P GEG+ TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 82 RFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
+E+RVHKR+ID+ + I I + V +E+ +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>sp|P14039|RS10_METVS 30S ribosomal protein S10 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps10 PE=3 SV=2
Length = 102
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LSS + L+ VC + A+ + + GP+ +PTK L ITTRKS GEG+++
Sbjct: 1 MQKARIKLSSTKHEELDSVCNQIKAIAEKTGVDMAGPIPLPTKSLKITTRKSTDGEGSSS 60
Query: 80 WDRFELRVHKRVIDLFSSP----DITSITIEPGVEVEVTI 115
+DR+ +RVHKRVID+ + I + I V++E+ +
Sbjct: 61 FDRWTMRVHKRVIDIEADERTMKHIMKVRIPDAVQIEIEL 100
>sp|B8GIQ4|RS10_METPE 30S ribosomal protein S10 OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps10 PE=3 SV=1
Length = 102
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI L+ + +E VC + A+ + + GP+ +PTK L + RKSP GEGT T
Sbjct: 1 MQKARIRLTGTDFNKVEMVCDKIREIAERTGVNLAGPIPLPTKRLVVPIRKSPDGEGTAT 60
Query: 80 WDRFELRVHKRVIDL 94
WDR+++RVHKR+ID+
Sbjct: 61 WDRWQMRVHKRLIDI 75
>sp|A4FWE8|RS10_METM5 30S ribosomal protein S10 OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rps10 PE=3 SV=1
Length = 102
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 20 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNT 79
+ K RI LSS L+ VC + A+ + + GP+ +PTK L +TTRKS GEG+++
Sbjct: 1 MQKARIKLSSTQHTELDGVCNQIKAIAEKTGVDMAGPIPLPTKALKVTTRKSTDGEGSSS 60
Query: 80 WDRFELRVHKRVIDL 94
+DR+ +RVHKRVID+
Sbjct: 61 FDRWTMRVHKRVIDI 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,553,423
Number of Sequences: 539616
Number of extensions: 1546035
Number of successful extensions: 5254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 287
Number of HSP's that attempted gapping in prelim test: 3944
Number of HSP's gapped (non-prelim): 864
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)