Citrus Sinensis ID: 033488


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
MARPSSLCSYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVVQIHFFG
cccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHccc
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccEccccccccccccHHHcccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccc
marpsslcsyFFTIVTFLVVVLISTTceadqsklpkkkLVASLFIFGDsildagnnnyintttldqanfwpygetffkyptgrfsdgrlvsDFMGEVLILQIFLLCLYLLVVQIHFFG
marpsslcsyFFTIVTFLVVVLISTTCeadqsklpkkKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVVQIHFFG
MARPSSLCSYfftivtflvvvlisttCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEvlilqifllclyllvvqiHFFG
******LCSYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVVQIHFF*
*************IVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLV*******
MARPSSLCSYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVVQIHFFG
*****SLCSYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVV******
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MARPSSLCSYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVLILQIFLLCLYLLVVQIHFFG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query118 2.2.26 [Sep-21-2011]
Q9SSA7 385 GDSL esterase/lipase 5 OS yes no 0.483 0.148 0.807 2e-21
Q9FLN0 374 GDSL esterase/lipase 1 OS no no 0.694 0.219 0.464 3e-17
Q9SYF0 376 GDSL esterase/lipase 2 OS no no 0.474 0.148 0.607 2e-16
Q9LJP1 377 GDSL esterase/lipase 4 OS no no 0.644 0.201 0.469 1e-15
Q9SYF5 367 GDSL esterase/lipase 3 OS no no 0.398 0.128 0.680 5e-14
Q9C996 362 GDSL esterase/lipase 6 OS no no 0.525 0.171 0.539 9e-13
Q3E7I6 385 GDSL esterase/lipase At1g no no 0.720 0.220 0.465 2e-12
Q9FXJ1 389 GDSL esterase/lipase At1g no no 0.762 0.231 0.419 6e-12
Q93X94 343 GDSL esterase/lipase EXL6 no no 0.669 0.230 0.382 7e-12
Q94CH5 358 GDSL esterase/lipase EXL5 no no 0.576 0.189 0.465 3e-11
>sp|Q9SSA7|GLIP5_ARATH GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2 Back     alignment and function desciption
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 51/57 (89%)

Query: 40  VASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGE 96
           V +LF+FGDS LDAGNNNYINTTTLDQANF PYG+TFF  PTGRFSDGRL+SDF+ E
Sbjct: 46  VTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFGLPTGRFSDGRLISDFIAE 102





Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9FLN0|GLIP1_ARATH GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SYF0|GLIP2_ARATH GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJP1|GRIP4_ARATH GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2 Back     alignment and function description
>sp|Q9SYF5|GLIP3_ARATH GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2 Back     alignment and function description
>sp|Q9C996|GLIP6_ARATH GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1 Back     alignment and function description
>sp|Q3E7I6|GDL11_ARATH GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXJ1|GDL6_ARATH GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1 Back     alignment and function description
>sp|Q93X94|EXL6_ARATH GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1 Back     alignment and function description
>sp|Q94CH5|EXL5_ARATH GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query118
224074089 370 predicted protein [Populus trichocarpa] 0.728 0.232 0.693 7e-26
356520157 376 PREDICTED: GDSL esterase/lipase 5-like [ 0.923 0.289 0.526 9e-24
449519244 372 PREDICTED: GDSL esterase/lipase 5-like [ 0.847 0.268 0.568 1e-23
449453459 372 PREDICTED: GDSL esterase/lipase 5-like [ 0.847 0.268 0.568 1e-23
356560192 377 PREDICTED: GDSL esterase/lipase 5-like [ 0.923 0.289 0.535 5e-23
255648295 376 unknown [Glycine max] 0.923 0.289 0.535 5e-23
388520523195 unknown [Medicago truncatula] 0.711 0.430 0.617 8e-22
359482940 368 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.754 0.241 0.586 1e-21
297742943 319 unnamed protein product [Vitis vinifera] 0.754 0.278 0.586 2e-21
297742940 392 unnamed protein product [Vitis vinifera] 0.762 0.229 0.554 2e-21
>gi|224074089|ref|XP_002304247.1| predicted protein [Populus trichocarpa] gi|222841679|gb|EEE79226.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 67/88 (76%), Gaps = 2/88 (2%)

Query: 9  SYFFTIVTFLVVVLISTTCEADQSKLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQAN 68
          S  F     L  VLIS  C+A  S+ PKK +VA  FIFGDS LDAGNNNYINTTTLDQAN
Sbjct: 5  SQHFLYAFLLHAVLISARCQAT-SEHPKKHVVA-FFIFGDSFLDAGNNNYINTTTLDQAN 62

Query: 69 FWPYGETFFKYPTGRFSDGRLVSDFMGE 96
          FWPYGETFFK+PTGRFSDGRL  DF+ +
Sbjct: 63 FWPYGETFFKFPTGRFSDGRLAPDFIAK 90




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520157|ref|XP_003528731.1| PREDICTED: GDSL esterase/lipase 5-like [Glycine max] Back     alignment and taxonomy information
>gi|449519244|ref|XP_004166645.1| PREDICTED: GDSL esterase/lipase 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449453459|ref|XP_004144475.1| PREDICTED: GDSL esterase/lipase 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356560192|ref|XP_003548378.1| PREDICTED: GDSL esterase/lipase 5-like [Glycine max] Back     alignment and taxonomy information
>gi|255648295|gb|ACU24600.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388520523|gb|AFK48323.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|359482940|ref|XP_003632862.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742943|emb|CBI35810.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742940|emb|CBI35807.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query118
TAIR|locus:2197014 385 GLIP5 "AT1G53920" [Arabidopsis 0.483 0.148 0.807 2.5e-21
TAIR|locus:2163021 374 GLIP1 "AT5G40990" [Arabidopsis 0.474 0.149 0.625 1.4e-16
TAIR|locus:2090785 377 GLIP4 "AT3G14225" [Arabidopsis 0.474 0.148 0.589 3.2e-15
TAIR|locus:2014450 367 GLIP3 "AT1G53990" [Arabidopsis 0.398 0.128 0.680 1.8e-14
TAIR|locus:2204425 343 EXL6 "AT1G75930" [Arabidopsis 0.533 0.183 0.484 1.9e-12
TAIR|locus:2026286 362 GLIP6 "AT1G71120" [Arabidopsis 0.474 0.154 0.578 2.2e-12
TAIR|locus:2152435 375 AT5G45960 "AT5G45960" [Arabido 0.491 0.154 0.548 6.4e-11
TAIR|locus:2018718 385 AT1G28650 "AT1G28650" [Arabido 0.466 0.142 0.571 6.8e-11
TAIR|locus:2079849 320 AT3G43570 "AT3G43570" [Arabido 0.567 0.209 0.485 9.1e-11
TAIR|locus:2150565 354 AT5G03820 "AT5G03820" [Arabido 0.474 0.158 0.559 9.3e-11
TAIR|locus:2197014 GLIP5 "AT1G53920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 251 (93.4 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 46/57 (80%), Positives = 51/57 (89%)

Query:    40 VASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGE 96
             V +LF+FGDS LDAGNNNYINTTTLDQANF PYG+TFF  PTGRFSDGRL+SDF+ E
Sbjct:    46 VTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFGLPTGRFSDGRLISDFIAE 102




GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0016298 "lipase activity" evidence=ISS
GO:0006865 "amino acid transport" evidence=RCA
GO:0015824 "proline transport" evidence=RCA
TAIR|locus:2163021 GLIP1 "AT5G40990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090785 GLIP4 "AT3G14225" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014450 GLIP3 "AT1G53990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204425 EXL6 "AT1G75930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026286 GLIP6 "AT1G71120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152435 AT5G45960 "AT5G45960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018718 AT1G28650 "AT1G28650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079849 AT3G43570 "AT3G43570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150565 AT5G03820 "AT5G03820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SSA7GLIP5_ARATH3, ., 1, ., 1, ., -0.80700.48300.1480yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00034014001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (589 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query118
cd01837 315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 3e-26
PLN03156 351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 1e-16
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
 Score = 98.8 bits (247), Expect = 3e-26
 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 2/57 (3%)

Query: 42 SLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKYPTGRFSDGRLVSDFMGEVL 98
          +LF+FGDS++D GNNNY+ T  L +ANF PYG  F   PTGRFS+GRL+ DF+ E L
Sbjct: 2  ALFVFGDSLVDTGNNNYLPT--LAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEAL 56


The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315

>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 118
PLN03156 351 GDSL esterase/lipase; Provisional 99.92
cd01837 315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 99.86
PRK15381 408 pathogenicity island 2 effector protein SseJ; Prov 99.65
cd01847 281 Triacylglycerol_lipase_like Triacylglycerol lipase 99.53
cd01846 270 fatty_acyltransferase_like Fatty acyltransferase-l 99.42
COG3240 370 Phospholipase/lecithinase/hemolysin [Lipid metabol 97.23
PF00657 234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 96.47
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information
Probab=99.92  E-value=7.5e-26  Score=185.98  Aligned_cols=69  Identities=45%  Similarity=0.750  Sum_probs=60.9

Q ss_pred             CCCCCEEEEcCCchhhhccCCCccccccccCCCCCCCCCCCC-CCCccCCCCCcHHHHHHHhcCC-CCcchHh
Q 033488           37 KKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFK-YPTGRFSDGRLVSDFMGEVLIL-QIFLLCL  107 (118)
Q Consensus        37 ~~~~~aifvFGDSlsDtGN~~~l~~~~~~~~~~~PYG~tf~~-~ptGRfSnG~l~~DfiA~~lGl-p~~~p~~  107 (118)
                      ...+++|||||||++|+||++++.+..  +++++|||++|++ +|||||||||+|+||||+.||+ |.+|||+
T Consensus        24 ~~~~~aifvFGDSl~D~GN~~~l~~~~--~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl   94 (351)
T PLN03156         24 CAKVPAIIVFGDSSVDAGNNNQISTVA--KSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYL   94 (351)
T ss_pred             cCCCCEEEEecCcCccCCCcccccccc--ccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCc
Confidence            355899999999999999998775532  7899999999975 7999999999999999999999 7777775



>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query118
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 2e-13
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score = 64.0 bits (155), Expect = 2e-13
 Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 3/78 (3%)

Query: 33  KLPKKKLVASLFIFGDSILDAGNNNYINTTTLDQANFWPYGETFFKY-PTGRFSDGRLVS 91
            L      ++L +FGDS+ DAG            +           Y        G    
Sbjct: 8   HLEAPSPYSTLVVFGDSLSDAGQFPDPAGPA--GSTSRFTNRVGPTYQNGSGEIFGPTAP 65

Query: 92  DFMGEVLILQIFLLCLYL 109
             +G  L +    L    
Sbjct: 66  MLLGNQLGIAPGDLAAST 83


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query118
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 99.67
2q0q_A 216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 86.68
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=99.67  E-value=2.8e-17  Score=140.59  Aligned_cols=70  Identities=21%  Similarity=0.213  Sum_probs=53.1

Q ss_pred             CCCCCCCCEEEEcCCchhhhccCCCcccccc--ccCCCCCCCCCCCCCCCccCC-CCCcHHHHHHHhcCCCC--cchHh
Q 033488           34 LPKKKLVASLFIFGDSILDAGNNNYINTTTL--DQANFWPYGETFFKYPTGRFS-DGRLVSDFMGEVLILQI--FLLCL  107 (118)
Q Consensus        34 ~~~~~~~~aifvFGDSlsDtGN~~~l~~~~~--~~~~~~PYG~tf~~~ptGRfS-nG~l~~DfiA~~lGlp~--~~p~~  107 (118)
                      +..+.++++||+||||++||||+..+.....  .+-.. |+|.+|+   +|||| |||+|+|||||.||+|.  ++|++
T Consensus         9 ~~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~-~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~   83 (632)
T 3kvn_X            9 LEAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTN-RVGPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAAST   83 (632)
T ss_dssp             TSCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSC-BCSSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSS
T ss_pred             ccCCCCCccEEEEccccccCCCcccccCCcCCcccccc-CCCCccc---cCcccccCCchHHHHHHHcCCCccccCccc
Confidence            4567899999999999999999865433210  01111 2388776   99999 99999999999999993  66764



>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query118
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 85.43
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=85.43  E-value=0.24  Score=31.83  Aligned_cols=15  Identities=33%  Similarity=0.204  Sum_probs=12.4

Q ss_pred             CCCCEEEEcCCchhh
Q 033488           38 KLVASLFIFGDSILD   52 (118)
Q Consensus        38 ~~~~aifvFGDSlsD   52 (118)
                      ..-++|++||||+++
T Consensus         6 ~~~kkI~~~GDS~T~   20 (248)
T d3bzwa1           6 WQGKKVGYIGDSITD   20 (248)
T ss_dssp             TTTCEEEEEESTTTC
T ss_pred             CCCCEEEEEehHHcc
Confidence            455789999999886