Query 033491
Match_columns 118
No_of_seqs 101 out of 338
Neff 4.0
Searched_HMMs 46136
Date Fri Mar 29 02:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033491.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033491hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02681 DUF212: Divergent PAP 100.0 9.2E-52 2E-56 310.3 9.1 96 23-118 1-96 (141)
2 COG1963 Uncharacterized protei 100.0 1.3E-47 2.9E-52 290.8 8.8 101 18-118 2-102 (153)
3 cd03383 PAP2_diacylglycerolkin 97.4 0.0013 2.7E-08 47.2 7.9 70 24-103 6-78 (109)
4 cd03394 PAP2_like_5 PAP2_like_ 97.3 0.003 6.6E-08 43.6 8.6 54 29-86 9-62 (106)
5 cd03391 PAP2_containing_2_like 96.5 0.0084 1.8E-07 44.8 6.0 41 63-103 91-131 (159)
6 cd03388 PAP2_SPPase1 PAP2_like 96.5 0.016 3.4E-07 42.5 7.1 73 29-103 39-123 (151)
7 PF01569 PAP2: PAP2 superfamil 96.4 0.033 7.1E-07 37.9 8.1 29 62-90 48-76 (129)
8 cd03382 PAP2_dolichyldiphospha 96.4 0.043 9.2E-07 40.9 9.2 22 61-82 79-100 (159)
9 PRK09597 lipid A 1-phosphatase 96.2 0.046 1E-06 43.3 8.7 70 31-102 85-156 (190)
10 cd01610 PAP2_like PAP2_like pr 96.1 0.048 1E-06 36.0 7.1 55 30-86 10-74 (122)
11 cd03393 PAP2_like_3 PAP2_like_ 96.0 0.032 6.9E-07 39.5 6.6 55 27-83 17-78 (125)
12 cd03392 PAP2_like_2 PAP2_like_ 95.8 0.077 1.7E-06 39.3 8.2 50 31-82 70-120 (182)
13 cd03385 PAP2_BcrC_like PAP2_li 95.3 0.23 5E-06 35.9 8.8 39 62-102 76-114 (144)
14 PLN02525 phosphatidic acid pho 95.2 0.062 1.3E-06 45.7 6.4 72 32-103 44-133 (352)
15 cd03389 PAP2_lipid_A_1_phospha 95.1 0.2 4.2E-06 38.1 8.4 22 63-84 118-139 (186)
16 cd03395 PAP2_like_4 PAP2_like_ 94.5 0.2 4.4E-06 37.2 7.0 40 63-103 104-143 (177)
17 KOG3146 Dolichyl pyrophosphate 93.4 0.46 9.9E-06 39.0 7.5 68 36-103 60-145 (228)
18 smart00014 acidPPc Acid phosph 92.7 0.53 1.1E-05 32.2 6.0 52 32-83 4-65 (116)
19 PRK11837 undecaprenyl pyrophos 92.5 0.83 1.8E-05 35.6 7.5 70 30-103 66-141 (202)
20 cd03384 PAP2_wunen PAP2, wunen 92.3 0.86 1.9E-05 33.6 7.2 20 63-82 72-91 (150)
21 cd03381 PAP2_glucose_6_phospha 90.8 1.1 2.4E-05 36.2 6.8 51 29-81 21-90 (235)
22 PRK10699 phosphatidylglyceroph 90.7 2.1 4.5E-05 35.0 8.4 41 63-103 157-199 (244)
23 cd03390 PAP2_containing_1_like 90.6 0.73 1.6E-05 34.9 5.4 20 63-82 110-129 (193)
24 COG0671 PgpB Membrane-associat 90.1 0.62 1.3E-05 32.9 4.4 44 61-104 132-181 (232)
25 cd03396 PAP2_like_6 PAP2_like_ 90.0 3.5 7.5E-05 31.4 8.7 18 62-79 121-138 (197)
26 PLN02731 Putative lipid phosph 85.7 4.9 0.00011 34.3 7.8 20 64-83 180-199 (333)
27 cd03380 PAP2_like_1 PAP2_like_ 85.4 1.7 3.7E-05 33.2 4.5 25 61-85 141-165 (209)
28 cd03386 PAP2_Aur1_like PAP2_li 81.4 2.5 5.3E-05 31.8 3.9 41 61-103 115-155 (186)
29 KOG2822 Sphingoid base-phospha 79.7 2.2 4.9E-05 37.5 3.6 56 35-91 123-189 (407)
30 PLN02250 lipid phosphate phosp 79.1 14 0.0003 31.2 8.0 20 63-82 161-180 (314)
31 cd03397 PAP2_acid_phosphatase 68.4 5.2 0.00011 31.7 2.8 23 61-83 148-170 (232)
32 PF14378 PAP2_3: PAP2 superfam 65.1 14 0.0003 27.7 4.4 45 64-109 127-171 (191)
33 PLN02715 lipid phosphate phosp 64.0 29 0.00062 29.6 6.6 20 63-82 185-204 (327)
34 TIGR00697 conserved hypothetic 63.4 13 0.00028 29.2 4.2 37 16-52 90-129 (202)
35 PF00916 Sulfate_transp: Sulfa 60.3 24 0.00052 27.4 5.2 28 62-89 198-225 (280)
36 PF09877 DUF2104: Predicted me 52.0 53 0.0012 23.9 5.4 74 29-102 5-95 (99)
37 cd03398 PAP2_haloperoxidase PA 50.4 1.2E+02 0.0026 23.7 9.1 25 62-86 144-168 (232)
38 PRK11660 putative transporter; 48.6 52 0.0011 29.1 5.9 60 29-88 286-356 (568)
39 COG2246 Predicted membrane pro 45.2 88 0.0019 23.1 5.8 53 32-85 42-101 (139)
40 PF02714 DUF221: Domain of unk 38.7 2E+02 0.0044 22.9 8.1 86 18-103 188-281 (325)
41 PF10746 Phage_holin_6: Phage 38.4 63 0.0014 22.0 3.8 34 17-50 25-58 (66)
42 KOG4491 Predicted membrane pro 36.1 38 0.00082 28.9 2.9 57 24-87 79-146 (323)
43 PRK11212 hypothetical protein; 36.0 64 0.0014 25.8 4.1 40 19-58 100-142 (210)
44 TIGR00815 sulP high affinity s 34.9 1.4E+02 0.0031 26.3 6.5 59 29-88 266-336 (563)
45 PF10176 DUF2370: Protein of u 32.2 86 0.0019 25.8 4.3 40 16-55 183-222 (233)
46 PF10190 Tmemb_170: Putative t 31.2 58 0.0013 23.7 2.9 40 20-60 4-43 (105)
47 PF03526 Microcin: Colicin E1 28.3 90 0.0019 20.6 3.1 41 22-63 3-43 (55)
48 PF02592 DUF165: Uncharacteriz 26.8 1.1E+02 0.0023 22.3 3.8 36 17-52 57-95 (145)
49 PF03116 NQR2_RnfD_RnfE: NQR2, 25.1 4.1E+02 0.0088 22.3 7.3 28 27-54 40-67 (313)
50 TIGR01946 rnfD electron transp 24.6 4E+02 0.0087 22.7 7.2 69 25-101 33-101 (327)
51 PF06146 PsiE: Phosphate-starv 22.5 1.1E+02 0.0023 19.4 2.7 30 33-62 5-34 (69)
No 1
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=100.00 E-value=9.2e-52 Score=310.28 Aligned_cols=96 Identities=57% Similarity=0.923 Sum_probs=94.4
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033491 23 IITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM 102 (118)
Q Consensus 23 l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM 102 (118)
|++|++|+++++||++||++|++++++++|+|||++++++|||||||||+|+||+|++|+++||+||+||+|++||+|||
T Consensus 1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm 80 (141)
T PF02681_consen 1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM 80 (141)
T ss_pred CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhhhhhhcccC
Q 033491 103 YDATGVRLQAGRQAEV 118 (118)
Q Consensus 103 yDA~GVRr~aG~qA~v 118 (118)
|||+||||++||||++
T Consensus 81 yDA~GVRr~aG~qA~~ 96 (141)
T PF02681_consen 81 YDAMGVRRAAGKQAKV 96 (141)
T ss_pred eehHHHHHHHHHHHHH
Confidence 9999999999999974
No 2
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1.3e-47 Score=290.76 Aligned_cols=101 Identities=49% Similarity=0.723 Sum_probs=98.5
Q ss_pred cchhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 033491 18 SSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALIL 97 (118)
Q Consensus 18 ~~~~~l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~ 97 (118)
.++.++++|.+|++|++||+.||++|++|+++++||+||+.+++||||||||||+|+||+|++|+++|||||+||||++|
T Consensus 2 ~~~~~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vf 81 (153)
T COG1963 2 QDLMEIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVF 81 (153)
T ss_pred chHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccchhhhhhhhcccC
Q 033491 98 ACVVMYDATGVRLQAGRQAEV 118 (118)
Q Consensus 98 a~IVMyDA~GVRr~aG~qA~v 118 (118)
|+||||||.||||++|+||++
T Consensus 82 aiIvm~DA~GVRr~aG~QA~i 102 (153)
T COG1963 82 AIIVMYDATGVRRSAGVQARI 102 (153)
T ss_pred HHHHhhhhhhHHHhccchHHH
Confidence 999999999999999999964
No 3
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=97.40 E-value=0.0013 Score=47.19 Aligned_cols=70 Identities=21% Similarity=0.306 Sum_probs=44.8
Q ss_pred hhchH---HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 033491 24 ITNFP---LISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACV 100 (118)
Q Consensus 24 ~~N~~---L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~I 100 (118)
-+|++ +.+-+++.++.+++|.++ +.. .+. .+||||.|++...++++.+.+... ....-.+..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~~~lK~~~---~r~--RP~----~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~l 75 (109)
T cd03383 6 GESPPHVTFVSLLIVIIVVVILKAYF---GRG--TPL----EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVM 75 (109)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHh---CCC--CCC----CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 34554 455566888888888865 222 221 368999999999999998876421 11233455566666
Q ss_pred HHh
Q 033491 101 VMY 103 (118)
Q Consensus 101 VMy 103 (118)
|.+
T Consensus 76 v~~ 78 (109)
T cd03383 76 VAH 78 (109)
T ss_pred HHH
Confidence 654
No 4
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=97.29 E-value=0.003 Score=43.65 Aligned_cols=54 Identities=22% Similarity=0.254 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcC
Q 033491 29 LISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGF 86 (118)
Q Consensus 29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~ 86 (118)
+.+.+++.++.+.+|..++- .|-.+ ..-...+|||.|++...++++.+....+.
T Consensus 9 ~~~~~~~~~~~~~lK~~~~r--~RP~~--~~~~~~sfPSgHa~~a~~~~~~~~~~~~~ 62 (106)
T cd03394 9 AEAAALTAAVTEGLKFAVGR--ARPDG--SNNGYRSFPSGHTASAFAAATFLQYRYGW 62 (106)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCCCC--CCCCCCccCcHHHHHHHHHHHHHHHHHcc
Confidence 44555666777777776531 22111 11557799999999999999999887765
No 5
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=96.51 E-value=0.0084 Score=44.82 Aligned_cols=41 Identities=22% Similarity=0.147 Sum_probs=28.8
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033491 63 GGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY 103 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy 103 (118)
-+|||.|++...++++.+.+..+.......+.+.++++|.+
T Consensus 91 ~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~ 131 (159)
T cd03391 91 YSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGI 131 (159)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999988887655333344455555666554
No 6
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=96.47 E-value=0.016 Score=42.48 Aligned_cols=73 Identities=19% Similarity=0.165 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccch---hhh----hccCCCCchhHHHHHHHHHHHHHHh--cCCch---HHHHHHH
Q 033491 29 LISAFVAFTIAQCAKFFTAWYKERRWDL---KQL----IGSGGMPSSHSATVTALAMAVGFQE--GFGGP---LFATALI 96 (118)
Q Consensus 29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~---~~l----~~sGGMPSSHSA~V~aLat~iG~~~--G~~S~---~Faia~v 96 (118)
+....++..+.+++|..++.- |-... ... -..=||||.|++...++++.+.+.. .+..+ ...++++
T Consensus 39 ~~~~~~~~~~~~~lK~~~~r~--RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 116 (151)
T cd03388 39 VVVLALGMYIGQFIKDLFCLP--RPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALF 116 (151)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 344556667788888877532 21111 111 1234899999999999998887642 22211 2234455
Q ss_pred HHHHHHh
Q 033491 97 LACVVMY 103 (118)
Q Consensus 97 ~a~IVMy 103 (118)
+++.|.+
T Consensus 117 ~~~~v~~ 123 (151)
T cd03388 117 YSTLVCL 123 (151)
T ss_pred HHHHHHH
Confidence 5565554
No 7
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=96.44 E-value=0.033 Score=37.86 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=23.0
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcCCchH
Q 033491 62 SGGMPSSHSATVTALAMAVGFQEGFGGPL 90 (118)
Q Consensus 62 sGGMPSSHSA~V~aLat~iG~~~G~~S~~ 90 (118)
.++|||.|++...++++.+-...+.....
T Consensus 48 ~~sfPSgH~~~~~~~~~~l~~~~~~~~~~ 76 (129)
T PF01569_consen 48 FNSFPSGHAAIAAAFAFFLAYYLGSRGWI 76 (129)
T ss_dssp S-SSS-HHHHHHHHHHHHHHHHCCCCHHH
T ss_pred CCcCcchhhhhHHHHHhhhhhhhhccccc
Confidence 35999999999999999998888776664
No 8
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=96.39 E-value=0.043 Score=40.86 Aligned_cols=22 Identities=36% Similarity=0.409 Sum_probs=17.1
Q ss_pred ccCCCCchhHHHHHHHHHHHHH
Q 033491 61 GSGGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~ 82 (118)
..-||||.|++...++++.+.+
T Consensus 79 ~~~SFPSgHa~~~~~~~~~~~l 100 (159)
T cd03382 79 SGYGMPSSHSQFMGFFAVYLLL 100 (159)
T ss_pred CCCCCCchhHHHHHHHHHHHHH
Confidence 4669999999988777766654
No 9
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=96.18 E-value=0.046 Score=43.33 Aligned_cols=70 Identities=19% Similarity=0.150 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033491 31 SAFVAFTIAQCAKFFTAWYK--ERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM 102 (118)
Q Consensus 31 ~al~a~~~AQ~lK~~i~~~~--~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM 102 (118)
+.+.+.++.+.+|..++-.. +-+.+.+.--.+-+|||.|++...+.++.+...+++..... .+.++++|.
T Consensus 85 al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~~~~--~l~lallVg 156 (190)
T PRK09597 85 ASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYWW--LLPLIPLTM 156 (190)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhHHHH--HHHHHHHHH
Confidence 44444555566666554210 01222221112358999999999888877776666654333 334445554
No 10
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=96.05 E-value=0.048 Score=36.00 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhh----------hccCCCCchhHHHHHHHHHHHHHHhcC
Q 033491 30 ISAFVAFTIAQCAKFFTAWYKERRWDLKQL----------IGSGGMPSSHSATVTALAMAVGFQEGF 86 (118)
Q Consensus 30 ~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l----------~~sGGMPSSHSA~V~aLat~iG~~~G~ 86 (118)
.......++.+.+|.+.. +.|-+..... -...+|||.|++...++++.+....+-
T Consensus 10 ~~~~~~~~~~~~~k~~~~--~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~ 74 (122)
T cd01610 10 LALLAGLLLTGVLKYLFG--RPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74 (122)
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 333444456778887732 2222222211 225899999999999999999887664
No 11
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=96.04 E-value=0.032 Score=39.47 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccchh-------hhhccCCCCchhHHHHHHHHHHHHHH
Q 033491 27 FPLISAFVAFTIAQCAKFFTAWYKERRWDLK-------QLIGSGGMPSSHSATVTALAMAVGFQ 83 (118)
Q Consensus 27 ~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~-------~l~~sGGMPSSHSA~V~aLat~iG~~ 83 (118)
..+.+.+++.++.+++|..++ +.|-.... .--...++||.|++...++.+.+...
T Consensus 17 ~~~~~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 78 (125)
T cd03393 17 YLGLALCASGYLNAALKEVFK--IPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLH 78 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 356677778888888888763 22211111 11235789999999887776666544
No 12
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=95.84 E-value=0.077 Score=39.32 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhh-hhccCCCCchhHHHHHHHHHHHHH
Q 033491 31 SAFVAFTIAQCAKFFTAWYKERRWDLKQ-LIGSGGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 31 ~al~a~~~AQ~lK~~i~~~~~r~~d~~~-l~~sGGMPSSHSA~V~aLat~iG~ 82 (118)
+.+.+.++.|++|.+++ +.|-..... --...+|||.|++...+++..+.+
T Consensus 70 ~~~~~~~~~~~lK~~~~--r~RP~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~ 120 (182)
T cd03392 70 ALLGGGALNTLLKLLVQ--RPRPPLHLLVPEGGYSFPSGHAMGATVLYGFLAY 120 (182)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCCcccCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 34456666777777763 222111111 124567999999999888776654
No 13
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=95.28 E-value=0.23 Score=35.86 Aligned_cols=39 Identities=23% Similarity=0.230 Sum_probs=24.3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 033491 62 SGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVM 102 (118)
Q Consensus 62 sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVM 102 (118)
.-+|||.|++...++++.+.+.+- -....+.++++++|.
T Consensus 76 ~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~ 114 (144)
T cd03385 76 DSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVA 114 (144)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHH
Confidence 468999999998888876654331 112334455555554
No 14
>PLN02525 phosphatidic acid phosphatase family protein
Probab=95.18 E-value=0.062 Score=45.71 Aligned_cols=72 Identities=15% Similarity=0.089 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhh--------cc-CCCCchhHHHHHHHHHHHHHH-h---cCCch-----HHHH
Q 033491 32 AFVAFTIAQCAKFFTAWYKERRWDLKQLI--------GS-GGMPSSHSATVTALAMAVGFQ-E---GFGGP-----LFAT 93 (118)
Q Consensus 32 al~a~~~AQ~lK~~i~~~~~r~~d~~~l~--------~s-GGMPSSHSA~V~aLat~iG~~-~---G~~S~-----~Fai 93 (118)
-.++..+.|++|-++..-|=..-...++. .. =||||+||+..++++..+.+. . ...++ ..++
T Consensus 44 l~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l 123 (352)
T PLN02525 44 MAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLAL 123 (352)
T ss_pred HHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 34455778888877743221100111121 11 289999999999998766543 1 11122 1345
Q ss_pred HHHHHHHHHh
Q 033491 94 ALILACVVMY 103 (118)
Q Consensus 94 a~v~a~IVMy 103 (118)
+.++++.|+|
T Consensus 124 ~~l~allV~~ 133 (352)
T PLN02525 124 FCLLVALVGF 133 (352)
T ss_pred HHHHHHHHHH
Confidence 6666777665
No 15
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=95.12 E-value=0.2 Score=38.12 Aligned_cols=22 Identities=41% Similarity=0.415 Sum_probs=18.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHh
Q 033491 63 GGMPSSHSATVTALAMAVGFQE 84 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~~~ 84 (118)
-++||.|++...++++.+.+..
T Consensus 118 ~SFPSGHa~~a~~~~~~l~~~~ 139 (186)
T cd03389 118 TSFPSGHSATAGAAAAALALLF 139 (186)
T ss_pred CCcCcHHHHHHHHHHHHHHHHH
Confidence 3799999999999998887654
No 16
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=94.54 E-value=0.2 Score=37.24 Aligned_cols=40 Identities=30% Similarity=0.237 Sum_probs=27.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033491 63 GGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY 103 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy 103 (118)
=++||.|++...++++.+.+..--. +...+.+++++.|.+
T Consensus 104 ~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~ 143 (177)
T cd03395 104 YSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALLVGY 143 (177)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3799999999999999887642111 234455666666654
No 17
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=93.40 E-value=0.46 Score=38.95 Aligned_cols=68 Identities=26% Similarity=0.322 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhcccchhh--------hhccCCCCchhHHHHHHHHH--HHHHHhcCCchHHHHHH--------HH
Q 033491 36 FTIAQCAKFFTAWYKERRWDLKQ--------LIGSGGMPSSHSATVTALAM--AVGFQEGFGGPLFATAL--------IL 97 (118)
Q Consensus 36 ~~~AQ~lK~~i~~~~~r~~d~~~--------l~~sGGMPSSHSA~V~aLat--~iG~~~G~~S~~Faia~--------v~ 97 (118)
.++.|++.=++|++.++.++-.| +-..=|||||||=.+.=..+ ..-..+++++.-|..-. .+
T Consensus 60 ~~~G~v~Ne~in~viK~il~qpRP~~~~~~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laL 139 (228)
T KOG3146|consen 60 FVIGQVSNEFINVVIKNILKQPRPVSFPDTTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLAL 139 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 34566666666655433333222 33455999999987653333 33444555555444333 44
Q ss_pred HHHHHh
Q 033491 98 ACVVMY 103 (118)
Q Consensus 98 a~IVMy 103 (118)
+..|||
T Consensus 140 s~~v~~ 145 (228)
T KOG3146|consen 140 SFYVCY 145 (228)
T ss_pred HHHHHH
Confidence 556665
No 18
>smart00014 acidPPc Acid phosphatase homologues.
Probab=92.67 E-value=0.53 Score=32.21 Aligned_cols=52 Identities=17% Similarity=0.115 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc---------chhhh-hccCCCCchhHHHHHHHHHHHHHH
Q 033491 32 AFVAFTIAQCAKFFTAWYKERRW---------DLKQL-IGSGGMPSSHSATVTALAMAVGFQ 83 (118)
Q Consensus 32 al~a~~~AQ~lK~~i~~~~~r~~---------d~~~l-~~sGGMPSSHSA~V~aLat~iG~~ 83 (118)
.+.+-++.+++|..+..-+=..+ +.... -...++||.|++...+.++.+...
T Consensus 4 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~ 65 (116)
T smart00014 4 AVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLY 65 (116)
T ss_pred HHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHH
Confidence 45666777777777642221001 11111 235789999999999998888753
No 19
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=92.45 E-value=0.83 Score=35.61 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch----hhh--hccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033491 30 ISAFVAFTIAQCAKFFTAWYKERRWDL----KQL--IGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY 103 (118)
Q Consensus 30 ~~al~a~~~AQ~lK~~i~~~~~r~~d~----~~l--~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy 103 (118)
.+.+++.++.+++|.+++ +.|-... ..+ -..-.+||.|++...+.++.+-+... -....+.++++++|++
T Consensus 66 ~~~~~~~~~~~~lk~~~~--r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~ 141 (202)
T PRK11837 66 IALAISLLVSWTIGHLFP--HDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAW 141 (202)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 344566667777777663 1121110 011 23457999999987776654322211 1133445555666554
No 20
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=92.35 E-value=0.86 Score=33.61 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=16.3
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 033491 63 GGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~ 82 (118)
=+|||.||+...+.++.+.+
T Consensus 72 ~SFPSGHs~~a~~~~~~l~l 91 (150)
T cd03384 72 LSFPSGHASLSMYAAVFLAL 91 (150)
T ss_pred cCCCcHhHHHHHHHHHHHHH
Confidence 47999999999877776654
No 21
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=90.81 E-value=1.1 Score=36.21 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccch-hhh------------------hccCCCCchhHHHHHHHHHHHH
Q 033491 29 LISAFVAFTIAQCAKFFTAWYKERRWDL-KQL------------------IGSGGMPSSHSATVTALAMAVG 81 (118)
Q Consensus 29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~-~~l------------------~~sGGMPSSHSA~V~aLat~iG 81 (118)
+++.+++-.+-+++|.++. ++|-.-| ++. -...||||.|+...+++...+.
T Consensus 21 ~~~~~~~~~ln~vlK~ii~--r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~ 90 (235)
T cd03381 21 LWVAVIGDWLNLVFKWILF--GQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMV 90 (235)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHH
Confidence 4445555447888888773 3333211 110 1256899999977766655443
No 22
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=90.70 E-value=2.1 Score=34.95 Aligned_cols=41 Identities=27% Similarity=0.216 Sum_probs=23.3
Q ss_pred CCCCchhHHHHHHHHH-HHHHH-hcCCchHHHHHHHHHHHHHh
Q 033491 63 GGMPSSHSATVTALAM-AVGFQ-EGFGGPLFATALILACVVMY 103 (118)
Q Consensus 63 GGMPSSHSA~V~aLat-~iG~~-~G~~S~~Faia~v~a~IVMy 103 (118)
-||||.|++...+++. .+++. ..-....+.+.++.+..|+|
T Consensus 157 ySFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~ 199 (244)
T PRK10699 157 FAFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMG 199 (244)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999998766543 22221 11112334555666667665
No 23
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=90.59 E-value=0.73 Score=34.88 Aligned_cols=20 Identities=25% Similarity=0.190 Sum_probs=16.9
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 033491 63 GGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~ 82 (118)
-+|||.|++...++++.+.+
T Consensus 110 ~SFPSGHas~a~~~~~~l~l 129 (193)
T cd03390 110 KSFPSGHSSFAFAGLGFLSL 129 (193)
T ss_pred cCCCCccHHHHHHHHHHHHH
Confidence 37999999999888877765
No 24
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=90.11 E-value=0.62 Score=32.94 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=29.3
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHhcCCch------HHHHHHHHHHHHHhc
Q 033491 61 GSGGMPSSHSATVTALAMAVGFQEGFGGP------LFATALILACVVMYD 104 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~~~G~~S~------~Faia~v~a~IVMyD 104 (118)
...+|||.|++...+.+....+....-.. ...+..+++..|++-
T Consensus 132 ~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S 181 (232)
T COG0671 132 SGYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS 181 (232)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 35679999999998888877766554432 235555566666553
No 25
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=90.02 E-value=3.5 Score=31.36 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=14.0
Q ss_pred cCCCCchhHHHHHHHHHH
Q 033491 62 SGGMPSSHSATVTALAMA 79 (118)
Q Consensus 62 sGGMPSSHSA~V~aLat~ 79 (118)
.-.+||.|++...++...
T Consensus 121 ~~SFPSGHas~af~~~~~ 138 (197)
T cd03396 121 GCSFPSGHASAGFALLAL 138 (197)
T ss_pred CCcCCchhHHHHHHHHHH
Confidence 347999999998887543
No 26
>PLN02731 Putative lipid phosphate phosphatase
Probab=85.71 E-value=4.9 Score=34.27 Aligned_cols=20 Identities=15% Similarity=0.107 Sum_probs=17.0
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 033491 64 GMPSSHSATVTALAMAVGFQ 83 (118)
Q Consensus 64 GMPSSHSA~V~aLat~iG~~ 83 (118)
++||.||+...+..+.+.+.
T Consensus 180 SFPSGHSS~sfagl~fLsly 199 (333)
T PLN02731 180 SFPSGHTSWSFSGLGFLSLY 199 (333)
T ss_pred CCCchhHHHHHHHHHHHHHH
Confidence 79999999998888777763
No 27
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=85.44 E-value=1.7 Score=33.22 Aligned_cols=25 Identities=20% Similarity=0.088 Sum_probs=21.0
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHhc
Q 033491 61 GSGGMPSSHSATVTALAMAVGFQEG 85 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~~~G 85 (118)
..+++||.|++.-.++++.+....+
T Consensus 141 ~~~SfPSGHa~~a~a~a~~l~~~~~ 165 (209)
T cd03380 141 KHPSYPSGHATFGGAAALVLAELFP 165 (209)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999998876544
No 28
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=81.39 E-value=2.5 Score=31.83 Aligned_cols=41 Identities=17% Similarity=0.042 Sum_probs=26.8
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033491 61 GSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY 103 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy 103 (118)
....|||.|++....++..+.....- ....+..++++.+.+
T Consensus 115 ~~~~fPS~H~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~i~~ 155 (186)
T cd03386 115 PFNAFPSLHVAWAVLAALFLWRHRRR--LLRWLAVLWPLLIWL 155 (186)
T ss_pred CcceeCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 57789999999998888877765431 134444444444443
No 29
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=79.74 E-value=2.2 Score=37.55 Aligned_cols=56 Identities=21% Similarity=0.315 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHhc-----ccchh--hhhccCCCCchhHHHHHHHHHH----HHHHhcCCchHH
Q 033491 35 AFTIAQCAKFFTAWYKER-----RWDLK--QLIGSGGMPSSHSATVTALAMA----VGFQEGFGGPLF 91 (118)
Q Consensus 35 a~~~AQ~lK~~i~~~~~r-----~~d~~--~l~~sGGMPSSHSA~V~aLat~----iG~~~G~~S~~F 91 (118)
+.-+.|++|=.+.+=+-+ |+..+ .-.+. ||||||++--+|+... +-..+-+..|.+
T Consensus 123 ~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EY-G~PStHt~natais~~~~~~ls~~d~~s~p~~ 189 (407)
T KOG2822|consen 123 VMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEY-GMPSTHTMNATAISFYFFLVLSTMDRESYPIQ 189 (407)
T ss_pred HHHHhhhhhheeecCCCCCCCeEEEEeccchhhhh-CCCcchhhhhhHHHHHHHHHHHHhchhhhHHH
Confidence 445677777555433322 22222 12234 6999999876666554 444556666633
No 30
>PLN02250 lipid phosphate phosphatase
Probab=79.09 E-value=14 Score=31.23 Aligned_cols=20 Identities=20% Similarity=0.139 Sum_probs=16.3
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 033491 63 GGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~ 82 (118)
=.|||.||+...+..+.+.+
T Consensus 161 ~SFPSGHSS~afa~~~fLsl 180 (314)
T PLN02250 161 KSFPSGHTSWSFAGLGFLSL 180 (314)
T ss_pred CCCCchhHHHHHHHHHHHHH
Confidence 37999999998888776665
No 31
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=68.38 E-value=5.2 Score=31.69 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=19.3
Q ss_pred ccCCCCchhHHHHHHHHHHHHHH
Q 033491 61 GSGGMPSSHSATVTALAMAVGFQ 83 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~~ 83 (118)
..+++||.|++...+.++.+...
T Consensus 148 ~~~SfPSGHa~~a~a~a~~La~~ 170 (232)
T cd03397 148 KDGSYPSGHTAAGYAWALILAEL 170 (232)
T ss_pred CCCCCchHHHHHHHHHHHHHHHH
Confidence 47899999999999888877654
No 32
>PF14378 PAP2_3: PAP2 superfamily
Probab=65.09 E-value=14 Score=27.70 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=25.5
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHhccchhh
Q 033491 64 GMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMYDATGVR 109 (118)
Q Consensus 64 GMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMyDA~GVR 109 (118)
.|||-|.+...-.+..... .+-.--.+.+..++..+++.-....|
T Consensus 127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~stv~~~ 171 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFSTVYTG 171 (191)
T ss_pred ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHHHhC
Confidence 6999999985554444432 23333334566666665554433333
No 33
>PLN02715 lipid phosphate phosphatase
Probab=63.96 E-value=29 Score=29.55 Aligned_cols=20 Identities=20% Similarity=0.187 Sum_probs=16.7
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 033491 63 GGMPSSHSATVTALAMAVGF 82 (118)
Q Consensus 63 GGMPSSHSA~V~aLat~iG~ 82 (118)
=.+||.||+...+..+.+.+
T Consensus 185 ~SFPSGHSS~sfagl~~Lsl 204 (327)
T PLN02715 185 KSFPSGHTSWSFAGLTFLSL 204 (327)
T ss_pred CCCCchhHHHHHHHHHHHHH
Confidence 46999999999888887765
No 34
>TIGR00697 conserved hypothetical integral membrane protein. All known members of this family are proteins or 210-250 amino acids in length. Conserved regions of hydrophobicity suggest that all members of the family are integral membrane proteins.
Probab=63.38 E-value=13 Score=29.16 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=28.9
Q ss_pred CCcchhhhhhc--hHHHHHHHHHHHHHHHHH-HHHHHHhc
Q 033491 16 SSSSSSSIITN--FPLISAFVAFTIAQCAKF-FTAWYKER 52 (118)
Q Consensus 16 ~~~~~~~l~~N--~~L~~al~a~~~AQ~lK~-~i~~~~~r 52 (118)
....++.++.+ ++.+++++|.+++|++.. +.+++|++
T Consensus 90 ~~~af~~vf~~~~ri~~aS~~Aylisq~~dv~if~~lK~~ 129 (202)
T TIGR00697 90 SQTHFEALFSSSPRIALASLVAYIVSQLLDVKVFTFLKKR 129 (202)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567778888 669999999999999995 45566654
No 35
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=60.34 E-value=24 Score=27.41 Aligned_cols=28 Identities=32% Similarity=0.465 Sum_probs=19.5
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcCCch
Q 033491 62 SGGMPSSHSATVTALAMAVGFQEGFGGP 89 (118)
Q Consensus 62 sGGMPSSHSA~V~aLat~iG~~~G~~S~ 89 (118)
.||||.+++-.-+++....|=+..+.+-
T Consensus 198 ~gg~p~~~s~srs~~~~~~Ga~t~~s~~ 225 (280)
T PF00916_consen 198 FGGMPGSGSFSRSAVNYRAGARTRLSGL 225 (280)
T ss_pred hcccccccccccchHHHhcCcceeehhH
Confidence 6899999997776666655555544443
No 36
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=52.02 E-value=53 Score=23.94 Aligned_cols=74 Identities=24% Similarity=0.401 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH------hcccchhhhhc--cCCC------CchhHHHHHH---HHHHHHHHhcCCchHH
Q 033491 29 LISAFVAFTIAQCAKFFTAWYK------ERRWDLKQLIG--SGGM------PSSHSATVTA---LAMAVGFQEGFGGPLF 91 (118)
Q Consensus 29 L~~al~a~~~AQ~lK~~i~~~~------~r~~d~~~l~~--sGGM------PSSHSA~V~a---Lat~iG~~~G~~S~~F 91 (118)
+..+.+++++..++-....|.| +|+.|.-.+.- -||+ ||+|=....+ ++..+|.+-|++.-+|
T Consensus 5 ~li~~i~fiiGs~~GL~ySYkKy~~P~v~k~iD~~ALv~aiiG~~~~~vn~~~~~~~~~ig~~li~~~~GmRPGYGr~E~ 84 (99)
T PF09877_consen 5 LLIYIILFIIGSFLGLEYSYKKYREPFVEKKIDKLALVLAIIGGLILAVNSPSSPILYTIGAFLIGFPLGMRPGYGRIET 84 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhcccHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHhhhccCCCCCCeehh
Confidence 5566777777777777766665 55677655543 5666 6666554443 3456788999999999
Q ss_pred HHHHHHHHHHH
Q 033491 92 ATALILACVVM 102 (118)
Q Consensus 92 aia~v~a~IVM 102 (118)
.+..++|+++-
T Consensus 85 ~iG~iiA~l~~ 95 (99)
T PF09877_consen 85 VIGLIIALLIY 95 (99)
T ss_pred hhhHHHHHHHH
Confidence 99999998763
No 37
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=50.38 E-value=1.2e+02 Score=23.68 Aligned_cols=25 Identities=24% Similarity=0.174 Sum_probs=21.8
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhcC
Q 033491 62 SGGMPSSHSATVTALAMAVGFQEGF 86 (118)
Q Consensus 62 sGGMPSSHSA~V~aLat~iG~~~G~ 86 (118)
...+||.|++...++++.+...-|-
T Consensus 144 ~psyPSGHa~~a~a~a~vL~~~~~~ 168 (232)
T cd03398 144 HPSYPSGHATFAGAAATVLKALFGS 168 (232)
T ss_pred CCCCccHHHHHHHHHHHHHHHHhCC
Confidence 5789999999999999998877664
No 38
>PRK11660 putative transporter; Provisional
Probab=48.60 E-value=52 Score=29.13 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhh-hhc----------cCCCCchhHHHHHHHHHHHHHHhcCCc
Q 033491 29 LISAFVAFTIAQCAKFFTAWYKERRWDLKQ-LIG----------SGGMPSSHSATVTALAMAVGFQEGFGG 88 (118)
Q Consensus 29 L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~-l~~----------sGGMPSSHSA~V~aLat~iG~~~G~~S 88 (118)
+..++++.+..-+.....+-..+++.|.++ ++. .||||.+++-.-+++...-|=+.++.+
T Consensus 286 ~~iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~ 356 (568)
T PRK11660 286 FSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISA 356 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHH
Confidence 344555554444444444545667777744 332 699999997555544444443333333
No 39
>COG2246 Predicted membrane protein [Function unknown]
Probab=45.23 E-value=88 Score=23.08 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhhccCC-------CCchhHHHHHHHHHHHHHHhc
Q 033491 32 AFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGG-------MPSSHSATVTALAMAVGFQEG 85 (118)
Q Consensus 32 al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGG-------MPSSHSA~V~aLat~iG~~~G 85 (118)
..+|-.+|..+=++.+|+-+|+|-++.- ++.+ |-..|.+...++..-.+....
T Consensus 42 ~~~A~~~a~~~~ii~sf~~N~~wTF~~~-~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 101 (139)
T COG2246 42 YALANAIAYEAAIIFSFVLNRRWTFRDR-STSRLHEFLRRLVKFNVAVLLGLAVLLLVLYI 101 (139)
T ss_pred hHHHHHHHHHHHHHHHHHHHceeeEeec-CCCcHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3455566666778899999999999877 4333 344556666666655554443
No 40
>PF02714 DUF221: Domain of unknown function DUF221; InterPro: IPR003864 This domain is found in a family of hypothetical transmembrane proteins none of which have any known function, the aligned region is at 538 residues at maximum length.; GO: 0016020 membrane
Probab=38.71 E-value=2e+02 Score=22.89 Aligned_cols=86 Identities=14% Similarity=0.236 Sum_probs=59.3
Q ss_pred cchhhhhhchHHHHHH--HHHHHHHHHHHHHHHHHhccc-----chhhhh-ccCCCCchhHHHHHHHHHHHHHHhcCCch
Q 033491 18 SSSSSIITNFPLISAF--VAFTIAQCAKFFTAWYKERRW-----DLKQLI-GSGGMPSSHSATVTALAMAVGFQEGFGGP 89 (118)
Q Consensus 18 ~~~~~l~~N~~L~~al--~a~~~AQ~lK~~i~~~~~r~~-----d~~~l~-~sGGMPSSHSA~V~aLat~iG~~~G~~S~ 89 (118)
|.....+-|.++..++ ...-+.|..+.+..+++.+.. |..... +...++-+..=.-.-+...+++.++.-+|
T Consensus 188 p~~s~ffi~~ii~~~~~~~~~~Ll~~~~l~~~~~~~~~~~~t~r~~~~~~~~~~~f~~~~~ya~~l~v~~i~l~ys~i~P 267 (325)
T PF02714_consen 188 PNSSNFFINYIILQAFIGSPLELLRPPPLIIYYIRRKFFSKTPRELNELYTEPPPFDYGYQYAQMLLVFFIGLFYSPIAP 267 (325)
T ss_pred hhhhHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhh
Confidence 3444555666665554 455678888888887776544 222333 66677777776777888899999999999
Q ss_pred HHHHHHHHHHHHHh
Q 033491 90 LFATALILACVVMY 103 (118)
Q Consensus 90 ~Faia~v~a~IVMy 103 (118)
+--....+.+.+.|
T Consensus 268 lil~~~~~yf~l~y 281 (325)
T PF02714_consen 268 LILPFGLVYFLLKY 281 (325)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777777776664
No 41
>PF10746 Phage_holin_6: Phage holin family 6; InterPro: IPR019682 This entry represents a protein conserved in Caudovirales (known as tailed bacteriophages). Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis.
Probab=38.36 E-value=63 Score=22.00 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=29.3
Q ss_pred CcchhhhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 033491 17 SSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYK 50 (118)
Q Consensus 17 ~~~~~~l~~N~~L~~al~a~~~AQ~lK~~i~~~~ 50 (118)
..-|..|.-|..+.++-+++.+.|....+.+.++
T Consensus 25 a~~f~GLslneWfyiati~YtvlQig~~v~k~v~ 58 (66)
T PF10746_consen 25 ARYFWGLSLNEWFYIATIAYTVLQIGYLVWKKVR 58 (66)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445788889999999999999999999998874
No 42
>KOG4491 consensus Predicted membrane protein [Function unknown]
Probab=36.06 E-value=38 Score=28.89 Aligned_cols=57 Identities=19% Similarity=0.408 Sum_probs=37.5
Q ss_pred hhchHHHHHHHHHHHHH---------HHHHHHH-HHHh-cccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCC
Q 033491 24 ITNFPLISAFVAFTIAQ---------CAKFFTA-WYKE-RRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFG 87 (118)
Q Consensus 24 ~~N~~L~~al~a~~~AQ---------~lK~~i~-~~~~-r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~ 87 (118)
..|+++.+.++-++++. ..|-+-. +.++ +.-||-..+..||||+- |+..--++.|++
T Consensus 79 Ia~h~ff~sl~~fF~sss~~tkfr~~~k~r~~s~~~eg~GQRNWvQVlCNggva~~-------Lally~~~~G~g 146 (323)
T KOG4491|consen 79 IANHSFFTSLLMFFLSSSKLTKFRGEVKKRLDSEYKEGLGQRNWVQVLCNGGVATE-------LALLYMIENGPG 146 (323)
T ss_pred HhcchhHHHHHHHHHccchhhhHHHHHHHHHHHHHhhccCccchhhhhcCCcchHH-------HHHHHHHhcCCC
Confidence 56888888888888765 3333333 3333 56799999999999863 333334455554
No 43
>PRK11212 hypothetical protein; Provisional
Probab=36.03 E-value=64 Score=25.79 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=28.8
Q ss_pred chhhhhhchH--HHHHHHHHHHHHHHHHHH-HHHHhcccchhh
Q 033491 19 SSSSIITNFP--LISAFVAFTIAQCAKFFT-AWYKERRWDLKQ 58 (118)
Q Consensus 19 ~~~~l~~N~~--L~~al~a~~~AQ~lK~~i-~~~~~r~~d~~~ 58 (118)
.++.++.+.+ .+++++|.+++|.+.+.+ +.+|++|+=|-|
T Consensus 100 a~~~vfg~~~ri~laS~~AylvsQ~~dv~vf~~lK~~k~lWlR 142 (210)
T PRK11212 100 ALAEFNLFVARIALASFMAYVLGQILDVHVFNRLRQSRAWWVA 142 (210)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhhh
Confidence 4555655544 889999999999999865 466766655544
No 44
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=34.90 E-value=1.4e+02 Score=26.32 Aligned_cols=59 Identities=22% Similarity=0.297 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcccchhh-hhc----------cCCCCchhHHHHHHHHHHHHHHhcCCc
Q 033491 29 LISAFVAFTIAQC-AKFFTAWYKERRWDLKQ-LIG----------SGGMPSSHSATVTALAMAVGFQEGFGG 88 (118)
Q Consensus 29 L~~al~a~~~AQ~-lK~~i~~~~~r~~d~~~-l~~----------sGGMPSSHSA~V~aLat~iG~~~G~~S 88 (118)
+..++++.+-.-. .|.+- -..+.++|..+ ++. -||||.+|+..-+++....|=+..+.+
T Consensus 266 ~~ia~v~~~e~l~~a~~~~-~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~ 336 (563)
T TIGR00815 266 IAIAIVGLIESIAIARSFA-RMTGYKIDANQELVAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSG 336 (563)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHH
Confidence 4444555444333 23332 23456677744 332 799999999877665555544444444
No 45
>PF10176 DUF2370: Protein of unknown function (DUF2370); InterPro: IPR019325 Proteins in this family are conserved from fungi to humans. They include the human NEDD4 family-interacting proteins and the yeast BSD2 metal homeostatis proteins.
Probab=32.21 E-value=86 Score=25.77 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=32.9
Q ss_pred CCcchhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 033491 16 SSSSSSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWD 55 (118)
Q Consensus 16 ~~~~~~~l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d 55 (118)
++......-.|+.|...+++..+-=++|-+++|+|-||+.
T Consensus 183 ~~~~~~~~~~~~wla~~Lm~~G~fI~irsi~dY~rVKR~E 222 (233)
T PF10176_consen 183 SHGTDEASQSNPWLAYILMAFGWFIFIRSIIDYWRVKRME 222 (233)
T ss_pred CCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566788999998888888888999999999988754
No 46
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=31.24 E-value=58 Score=23.72 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=28.6
Q ss_pred hhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 033491 20 SSSIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLI 60 (118)
Q Consensus 20 ~~~l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~ 60 (118)
+.|...+ +++.++++..+-...-.++.++.-||+++.+++
T Consensus 4 f~emW~~-iflW~l~ss~~vh~~A~liA~~~lRkhk~~~f~ 43 (105)
T PF10190_consen 4 FSEMWYW-IFLWALFSSIFVHLIAGLIAFFTLRKHKFGRFI 43 (105)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhh
Confidence 4444444 456667777777888888888887888777765
No 47
>PF03526 Microcin: Colicin E1 (microcin) immunity protein; InterPro: IPR003061 The structural and functional relationships among independently cloned segments of the plasmid ColE1 region that regulates and codes for colicin E1 (cea), immunity (imm) and the mitomycin C-induced lethality function (lys) have been analysed []. A model for the structure and expression of the colicin E1 operon has been proposed in which the cea and lys genes are expressed from a single inducible promoter that is controlled by the lexA repressor in response to the SOS system of Escherichia coli []. The imm gene lies between the cea and lys genes and is expressed by transcription in the opposite direction from a promoter located within the lys gene []. This arrangement indicates that the transcriptional units for all three genes overlap. It is proposed that the formation of anti-sense RNA may be an important element in the coordinate regulation of gene expression in this system []. Hydropathy analysis of the imm gene products suggests that they have hydrophobic domains characteristic of membrane-associated proteins []. The microcin E1 immunity protein is able to protect a cell that harbours the plasmid ColE1 encoding colicin E1 against colicin E1; it is thus essential both for autonomous replication and colicin E1 immunity []. ; GO: 0015643 toxin binding, 0030153 bacteriocin immunity
Probab=28.28 E-value=90 Score=20.60 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=29.2
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccC
Q 033491 22 SIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSG 63 (118)
Q Consensus 22 ~l~~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sG 63 (118)
-|.+.++|.+++++.++--+.|..|+.+--| +--+.++++|
T Consensus 3 ~las~~~l~~~iiStIl~PfSk~aIE~ialk-ft~keFw~~~ 43 (55)
T PF03526_consen 3 FLASDKMLYLAIISTILFPFSKWAIEKIALK-FTKKEFWNKG 43 (55)
T ss_pred cccccchhHHHHHHHhhhhhHHHHHHHHHHH-hccHHHHhcC
Confidence 4566788999999999999999999866321 2333445444
No 48
>PF02592 DUF165: Uncharacterized ACR, YhhQ family COG1738; InterPro: IPR003744 This is a family of uncharacterised proteins. Conserved regions of hydrophobicity suggest that all members of the family may be integral membrane proteins.
Probab=26.83 E-value=1.1e+02 Score=22.35 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=26.3
Q ss_pred Ccchhhhhhc--hHHHHHHHHHHHHHHHHHHHH-HHHhc
Q 033491 17 SSSSSSIITN--FPLISAFVAFTIAQCAKFFTA-WYKER 52 (118)
Q Consensus 17 ~~~~~~l~~N--~~L~~al~a~~~AQ~lK~~i~-~~~~r 52 (118)
...++.++++ ++.+++++|.+++|.+...+- .+|++
T Consensus 57 ~~~~~~vf~~~~ri~~aS~~a~lisq~~d~~if~~lk~~ 95 (145)
T PF02592_consen 57 QEAFESVFGPTPRIALASLIAFLISQLLDVYIFSKLKRK 95 (145)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666644 448899999999999998775 44543
No 49
>PF03116 NQR2_RnfD_RnfE: NQR2, RnfD, RnfE family; InterPro: IPR004338 This family of proteins describes the Nqr2 (NqrB) subunit of the bacterial 6-subunit sodium-translocating NADH-ubiquinone oxidoreductase (i.e. a respiration linked sodium pump). In Vibrio cholerae, it negatively regulates the expression of virulence factors through inhibiting (by an unknown mechanism) the transcription of the transcriptional activator ToxT []. The family also includes RnfD, which is involved in nitrogen fixation. The similarity of RnfD to NADH-ubiquinone oxidoreductases was previously noted [].; GO: 0006810 transport, 0016020 membrane
Probab=25.08 E-value=4.1e+02 Score=22.27 Aligned_cols=28 Identities=25% Similarity=0.162 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033491 27 FPLISAFVAFTIAQCAKFFTAWYKERRW 54 (118)
Q Consensus 27 ~~L~~al~a~~~AQ~lK~~i~~~~~r~~ 54 (118)
+.++.-+++...|=+.-.+...+++|++
T Consensus 40 ~~l~~~~~av~~a~l~E~l~~~l~~~~~ 67 (313)
T PF03116_consen 40 RALLVILVAVLTAVLAEALFAKLRKRPI 67 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3455556666666667777777777765
No 50
>TIGR01946 rnfD electron transport complex, RnfABCDGE type, D subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit.
Probab=24.63 E-value=4e+02 Score=22.71 Aligned_cols=69 Identities=22% Similarity=0.096 Sum_probs=37.0
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccCCCCchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 033491 25 TNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPLFATALILACVV 101 (118)
Q Consensus 25 ~N~~L~~al~a~~~AQ~lK~~i~~~~~r~~d~~~l~~sGGMPSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IV 101 (118)
..+.++.-+++.+.+-+.-.++..+++|+. +.... .-||.|+++-.+.-+--+..--.-+++.+||+++
T Consensus 33 G~~al~~~~~~v~~av~~E~l~~~l~~k~~--~~~~~------D~Sa~vTglLlal~lP~~~P~W~~~ig~~faI~i 101 (327)
T TIGR01946 33 GWGTLIQIALAILTALILEAAILKLRKRSI--KAFLK------DGSAILTGLLLAVAIPPLAPWWMIVIGTIFAIVL 101 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--ccccC------CccHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 345555666666666666667766665543 11112 2366676666555555444444444555555543
No 51
>PF06146 PsiE: Phosphate-starvation-inducible E; InterPro: IPR020948 Phosphate-starvation-inducible E (PsiE) expression is under direct positive and negative control by PhoB and cAMP-CRP, respectively []. The function of PsiE remains to be determined. In addition to PsiE, this entry also contains a related proteobacterial family of proteins whose functions are not known, but are sometimes annotated as DNA-binding protein inhibitor-related, putative transcriptional regulators, or hypothetical DNA binding proteins.
Probab=22.49 E-value=1.1e+02 Score=19.43 Aligned_cols=30 Identities=17% Similarity=0.341 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhcc
Q 033491 33 FVAFTIAQCAKFFTAWYKERRWDLKQLIGS 62 (118)
Q Consensus 33 l~a~~~AQ~lK~~i~~~~~r~~d~~~l~~s 62 (118)
+.-|...-+.+.++.|+|+|+.+.+.+...
T Consensus 5 L~l~i~~El~~~i~~yl~~~~i~v~~~i~i 34 (69)
T PF06146_consen 5 LLLFILIELFRTIIIYLKEHRIPVRYIIDI 34 (69)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 455777788999999999999888877653
Done!