BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033493
         (118 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain
           168) GN=yuiD PE=4 SV=1
          Length = 158

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 57/97 (58%)

Query: 22  SIITNFPLISAFVAFTIAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVG 81
            ++TNFPL+S+  A   AQ  K    +   R+ D   +  +GGMPSSHSA VTAL+  V 
Sbjct: 2   ELLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVA 61

Query: 82  FQEGFGGPLFATALILACVVMYDATGVRLQAGRQAEV 118
            + G    LFA + I A + M+DATGVR  AG QA V
Sbjct: 62  LEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATV 98


>sp|O88022|MMPLC_STRCO Putative membrane protein SCO6666 OS=Streptomyces coelicolor
           (strain ATCC BAA-471 / A3(2) / M145) GN=SCO6666 PE=3
           SV=1
          Length = 705

 Score = 30.8 bits (68), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 24  ITNFPLISAFVAFTIAQCAKFFTAWY----KERRWDLKQLIGSGGMPSSHSATVTALAMA 79
           +T  PLI A +AF +A   + F        +ER  D ++ + +G   S    T  AL +A
Sbjct: 566 LTAPPLIIA-IAFGLAMDYELFILARMREARERTGDDREAVVTGLRRSGRVVTCAALLLA 624

Query: 80  V---GFQEGFGGPLFATALILACVVMYDATGVRL 110
           V    F  G   P+    L L   V+ DAT VR+
Sbjct: 625 VVFGAFMTGGFSPILQIGLGLTLAVLIDATVVRM 658


>sp|Q9H5J0|ZBTB3_HUMAN Zinc finger and BTB domain-containing protein 3 OS=Homo sapiens
           GN=ZBTB3 PE=1 SV=1
          Length = 574

 Score = 30.8 bits (68), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 38  IAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAV 80
           +A C+ FF  +YKER  D + L+        H+  VTA A  +
Sbjct: 92  LASCSPFFQLFYKERELDKRDLV------CIHNEIVTAPAFGL 128


>sp|Q4R3R9|MIER3_MACFA Mesoderm induction early response protein 3 OS=Macaca fascicularis
           GN=MIER3 PE=2 SV=1
          Length = 550

 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 37  TIAQCAKFFTAWYKERRWD-LKQLIGSGGMPSSHSATVTA-LAMAVGFQEGFGGPLFATA 94
           T+A+C  F+  W K  R+D   Q    G    +H   VT  +   V   E  GG + A+A
Sbjct: 313 TVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEALGGTVNASA 372

Query: 95  L 95
           L
Sbjct: 373 L 373


>sp|Q7Z3K6|MIER3_HUMAN Mesoderm induction early response protein 3 OS=Homo sapiens
           GN=MIER3 PE=1 SV=2
          Length = 550

 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 37  TIAQCAKFFTAWYKERRWD-LKQLIGSGGMPSSHSATVTA-LAMAVGFQEGFGGPLFATA 94
           T+A+C  F+  W K  R+D   Q    G    +H   VT  +   V   E  GG + A+A
Sbjct: 313 TVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEALGGTVNASA 372

Query: 95  L 95
           L
Sbjct: 373 L 373


>sp|Q91X45|ZBTB3_MOUSE Zinc finger and BTB domain-containing protein 3 OS=Mus musculus
          GN=Zbtb3 PE=2 SV=3
          Length = 518

 Score = 29.3 bits (64), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 38 IAQCAKFFTAWYKERRWDLKQLIGSGGMPSSHSATVTALAMAVGFQEGFGGPL 90
          +A C+ FF  +YKER  D + L+        H+  VTA A  +     + G L
Sbjct: 42 LASCSPFFQLFYKERELDKRDLV------CIHNEIVTAPAFGLLLDFMYAGQL 88


>sp|Q3EC77|PMT5_ARATH Probable methyltransferase PMT5 OS=Arabidopsis thaliana
           GN=At2g03480 PE=2 SV=2
          Length = 606

 Score = 28.9 bits (63), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 56  LKQLIGSGGMPSSHSATV-TALAMAVGFQEGFGGPLFATALILACVVMYDATGVRLQ 111
           + ++IG G       A V T L +  GF   FG  L +  L+  C+  Y+ATG ++Q
Sbjct: 200 IAEMIGLGSDTEFAQAGVRTVLDIGCGFGS-FGAHLVSLKLMPICIAEYEATGSQVQ 255


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.128    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,479,772
Number of Sequences: 539616
Number of extensions: 1276225
Number of successful extensions: 16190
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 15096
Number of HSP's gapped (non-prelim): 860
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)