Query 033493
Match_columns 118
No_of_seqs 101 out of 338
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 04:01:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ipb_A PHON protein, class A n 91.2 0.9 3.1E-05 34.1 7.6 25 60-84 129-153 (230)
2 1d2t_A Acid phosphatase; all a 80.9 2.9 0.0001 31.3 5.4 24 61-84 142-165 (231)
3 1qi9_A Protein (vanadium bromo 59.5 13 0.00043 32.6 5.1 49 36-84 374-433 (556)
4 1col_A Colicin A; antibacteria 29.5 2E+02 0.0067 22.3 7.5 49 38-88 114-169 (204)
5 2o08_A BH1327 protein; putativ 20.3 1.2E+02 0.0042 21.3 4.1 23 68-90 21-43 (188)
6 3ccg_A HD superfamily hydrolas 19.1 1.3E+02 0.0046 21.2 4.1 23 68-90 22-44 (190)
7 3c5t_B Exendin-4, exenatide; l 19.0 80 0.0028 17.7 2.2 18 36-53 5-22 (31)
8 2jln_A MHP1; hydantoin, transp 18.3 4E+02 0.014 21.8 8.1 54 50-103 385-442 (501)
9 2ogi_A Hypothetical protein SA 17.9 1.5E+02 0.005 21.2 4.1 23 68-90 29-51 (196)
10 3bej_E Nuclear receptor coacti 17.2 40 0.0014 18.3 0.6 8 66-73 2-9 (26)
No 1
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=91.23 E-value=0.9 Score=34.11 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=20.4
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHh
Q 033493 60 IGSGGMPSSHSATVTALAMAVGFQE 84 (118)
Q Consensus 60 ~~sGGMPSSHSA~V~aLat~iG~~~ 84 (118)
-...+|||.|++...++++.+.+..
T Consensus 129 ~~~~SFPSGHa~~a~a~a~~l~~~~ 153 (230)
T 2ipb_A 129 RKDGSYPSGHDAYSTLLALVLSQAR 153 (230)
T ss_dssp HTSCCSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcChHHHHHHHHHHHHHHHHH
Confidence 3567899999999999888877654
No 2
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=80.86 E-value=2.9 Score=31.34 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=20.1
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHh
Q 033493 61 GSGGMPSSHSATVTALAMAVGFQE 84 (118)
Q Consensus 61 ~sGGMPSSHSA~V~aLat~iG~~~ 84 (118)
...++||.|++...++++.+.+..
T Consensus 142 ~~~SFPSGHa~~a~a~a~~l~~~~ 165 (231)
T 1d2t_A 142 KNGSYPSGHTSIGWATALVLAEIN 165 (231)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHH
Confidence 467899999999999988887654
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=59.49 E-value=13 Score=32.64 Aligned_cols=49 Identities=18% Similarity=0.123 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHh--cccchhhhh---------ccCCCCchhHHHHHHHHHHHHHHh
Q 033493 36 FTIAQCAKFFTAWYKE--RRWDLKQLI---------GSGGMPSSHSATVTALAMAVGFQE 84 (118)
Q Consensus 36 ~~~AQ~lK~~i~~~~~--r~~d~~~l~---------~sGGMPSSHSA~V~aLat~iG~~~ 84 (118)
|.-.|++|.+++--+- ...+|..++ ....+||.|++...++++.+...-
T Consensus 374 ~~~~~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~ 433 (556)
T 1qi9_A 374 LENAELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALI 433 (556)
T ss_dssp HTCHHHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 3334678888754331 112344443 245899999999999998887554
No 4
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=29.54 E-value=2e+02 Score=22.27 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhcccchhhhh------ccCCCCchhHHH-HHHHHHHHHHHhcCCc
Q 033493 38 IAQCAKFFTAWYKERRWDLKQLI------GSGGMPSSHSAT-VTALAMAVGFQEGFGG 88 (118)
Q Consensus 38 ~AQ~lK~~i~~~~~r~~d~~~l~------~sGGMPSSHSA~-V~aLat~iG~~~G~~S 88 (118)
..++.--+.+-++++.|. .|+ ..||+-++.... .+++..+..+.-|...
T Consensus 114 ~~~v~~~~~~g~eTgNW~--Pl~~~lEs~~~~g~a~~val~~fs~~~~a~~~~~g~p~ 169 (204)
T 1col_A 114 VEKVREKSIEGYETGNWG--PLMLEVESWVLSGIASSVALGIFSATLGAYALSLGVPA 169 (204)
T ss_dssp HHHHHHHHHHHHHHCCCH--HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCCSCH
T ss_pred HHHHHHHHHHHhhCCCch--HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccccc
Confidence 344444555666778554 444 368999888774 4556666777777764
No 5
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=20.32 E-value=1.2e+02 Score=21.33 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCchH
Q 033493 68 SHSATVTALAMAVGFQEGFGGPL 90 (118)
Q Consensus 68 SHSA~V~aLat~iG~~~G~~S~~ 90 (118)
-||--|+.+|..+|...|++...
T Consensus 21 ~Hs~~Va~~A~~lA~~~g~~~~~ 43 (188)
T 2o08_A 21 QHTIGVMETAIDLAKLYGADQQK 43 (188)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCcCHHH
Confidence 49999999999999999997653
No 6
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=19.13 E-value=1.3e+02 Score=21.15 Aligned_cols=23 Identities=17% Similarity=-0.055 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchH
Q 033493 68 SHSATVTALAMAVGFQEGFGGPL 90 (118)
Q Consensus 68 SHSA~V~aLat~iG~~~G~~S~~ 90 (118)
.||--|+.+|..+|...|++...
T Consensus 22 ~Hs~~Va~~A~~lA~~~g~d~~~ 44 (190)
T 3ccg_A 22 KHSLGVMDTAVRLAGIYNEDTEK 44 (190)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCcCHHH
Confidence 49999999999999999997654
No 7
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=19.03 E-value=80 Score=17.70 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 033493 36 FTIAQCAKFFTAWYKERR 53 (118)
Q Consensus 36 ~~~AQ~lK~~i~~~~~r~ 53 (118)
.+=-|..|=+++|+++++
T Consensus 5 yLe~~aakdFv~WL~ngk 22 (31)
T 3c5t_B 5 QMEEEAVRLFIEWLKNGG 22 (31)
T ss_dssp HHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 344678888999998765
No 8
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=18.25 E-value=4e+02 Score=21.79 Aligned_cols=54 Identities=22% Similarity=0.279 Sum_probs=29.3
Q ss_pred HhcccchhhhhccCCC----CchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHh
Q 033493 50 KERRWDLKQLIGSGGM----PSSHSATVTALAMAVGFQEGFGGPLFATALILACVVMY 103 (118)
Q Consensus 50 ~~r~~d~~~l~~sGGM----PSSHSA~V~aLat~iG~~~G~~S~~Faia~v~a~IVMy 103 (118)
|.++.|...++...|- +--+=+.+.|...++...--..+--+-++++++.++-|
T Consensus 385 rr~~~~~~~l~~~~g~y~y~~g~n~~a~~a~~~G~~~~~~~~~~~~~~g~~va~v~Y~ 442 (501)
T 2jln_A 385 RRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHI 442 (501)
T ss_dssp STTCCCHHHHTBSSSTTCTBTTBCHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred hcccCChHHhhCCCCccccCCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 6778899888875553 23344444444444433322233345566666655544
No 9
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=17.94 E-value=1.5e+02 Score=21.17 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchH
Q 033493 68 SHSATVTALAMAVGFQEGFGGPL 90 (118)
Q Consensus 68 SHSA~V~aLat~iG~~~G~~S~~ 90 (118)
-||--|+.+|..+|...|++...
T Consensus 29 ~Hs~~Va~~A~~lA~~~g~d~~~ 51 (196)
T 2ogi_A 29 NHVLGVERAAIELAERYGYDKEK 51 (196)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCcCHHH
Confidence 49999999999999999997654
No 10
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=17.17 E-value=40 Score=18.30 Aligned_cols=8 Identities=63% Similarity=0.833 Sum_probs=6.0
Q ss_pred CchhHHHH
Q 033493 66 PSSHSATV 73 (118)
Q Consensus 66 PSSHSA~V 73 (118)
||||+++.
T Consensus 2 pss~~sL~ 9 (26)
T 3bej_E 2 PSSHSSLT 9 (26)
T ss_pred CCchhhHH
Confidence 88888753
Done!