BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033497
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484547|ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
Length = 102
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 20 IDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENF 79
ID F+LD A+T + +TS + S VS++PTV A + CTVC E F
Sbjct: 16 IDLCFDLDLAITAVDDTSEI-------------SKSTSMVSTMPTVTAVDA-CTVCREGF 61
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
GKQ+PCGH +HA CI++W+SL NSCP+CR V
Sbjct: 62 QSGEGGKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 98
>gi|297738762|emb|CBI28007.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 20 IDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENF 79
ID F+LD A+T + +TS + S VS++PTV A + CTVC E F
Sbjct: 82 IDLCFDLDLAITAVDDTSEI-------------SKSTSMVSTMPTVTAVDA-CTVCREGF 127
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
GKQ+PCGH +HA CI++W+SL NSCP+CR V
Sbjct: 128 QSGEGGKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 164
>gi|449488135|ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 116
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ V+ LPTVAA + C VCME+FL GKQ+PCGHV+H +C+S+W+S+ +SCP+CR
Sbjct: 43 VMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCR 99
>gi|255546337|ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
gi|223546684|gb|EEF48182.1| hypothetical protein RCOM_1049910 [Ricinus communis]
Length = 109
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 19 IIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR--CTVCM 76
+ID SF++DEAL + PP+ S S+ V+ +PTV +T+ C++CM
Sbjct: 16 LIDVSFDMDEALAL-------PPNFGHQIS-----ESDSLVADMPTVTSTDDHDVCSICM 63
Query: 77 ENFLQ-AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
E F GKQVPCGHV+HA CIS+W+S NSCP+CR + A
Sbjct: 64 EGFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCPLCRFNISA 106
>gi|224114495|ref|XP_002332344.1| predicted protein [Populus trichocarpa]
gi|222832065|gb|EEE70542.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 17 SPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT-EGRCTVC 75
S +ID SF+LDEALT+ P + Q ++ T V+ +PT T + C VC
Sbjct: 8 SCLIDTSFDLDEALTL-------PQNLSQQITYSNST----IVADMPTALTTGDAVCAVC 56
Query: 76 MENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
ME F GK+VPCGHV+H CIS +S +SCP+CR +
Sbjct: 57 MEGFQSGIGGKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97
>gi|255546191|ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus communis]
gi|223546611|gb|EEF48109.1| hypothetical protein RCOM_1048070 [Ricinus communis]
Length = 124
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 20/114 (17%)
Query: 23 SFNLDEALTMITNTSSTPPDQD-----QPKSHDGQT---NSELTV--------SSLPT-V 65
SF+LDEAL + N ++ D D Q SH T NS V + +PT +
Sbjct: 7 SFDLDEALCLTENAANLSFDLDVALTLQEISHHQTTPANNSPQVVVPADHRHHNHMPTTI 66
Query: 66 AATEGR--CTVCMENFLQA-FPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
ATE C CME F + GKQ PCGHV+HA CIS+W+S SN CP+CR +
Sbjct: 67 PATEDDEVCIFCMEGFESSRIGGKQTPCGHVYHAACISSWLSYSNRCPLCRCHI 120
>gi|242044428|ref|XP_002460085.1| hypothetical protein SORBIDRAFT_02g022520 [Sorghum bicolor]
gi|241923462|gb|EER96606.1| hypothetical protein SORBIDRAFT_02g022520 [Sorghum bicolor]
Length = 254
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 19 IIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSEL-TVSSLPTVAATEGRCTVCME 77
+ DE F +A+ + PPD + + G L T S+ P E CTVC+E
Sbjct: 111 LTDEEFR--KAMDQLRKQEYRPPDPQKKQGDSGGGRGILRTRSAAPPATTEEKACTVCLE 168
Query: 78 NFLQAFPGKQV---PCGHVFHATCISTWISLSNSCPVCR 113
FL PG+QV PC H+FH CI+ W+ +CPVCR
Sbjct: 169 TFL---PGEQVAITPCNHMFHQGCIAPWVKGHGNCPVCR 204
>gi|195645130|gb|ACG42033.1| RHC1A [Zea mays]
Length = 321
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ P KQ+PCGH FH++CI W+ L +SCPVCR
Sbjct: 182 AVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSSCPVCR 238
>gi|226499162|ref|NP_001140503.1| uncharacterized protein LOC100272564 [Zea mays]
gi|194699744|gb|ACF83956.1| unknown [Zea mays]
gi|413949698|gb|AFW82347.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413949699|gb|AFW82348.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 312
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ P KQ+PCGH FH++CI W+ L +SCPVCR
Sbjct: 181 VEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSSCPVCR 236
>gi|308080430|ref|NP_001182786.1| RHC1A [Zea mays]
gi|195612900|gb|ACG28280.1| RHC1A [Zea mays]
Length = 310
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ P KQ+PCGH FH++CI W+ L +SCPVCR
Sbjct: 179 AVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSSCPVCR 235
>gi|15219060|ref|NP_176239.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|3249088|gb|AAC24072.1| Contains similarity to goliath protein gb|M97204 from D.
melanogster [Arabidopsis thaliana]
gi|332195557|gb|AEE33678.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 327
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 55 SELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
SE T++SLP+V T +CTVCME F+ ++PC H++H CI W+ L+N
Sbjct: 200 SEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNN 259
Query: 108 SCPVCRSGV 116
SCP+CR +
Sbjct: 260 SCPICRRDL 268
>gi|226504942|ref|NP_001144032.1| uncharacterized protein LOC100276856 [Zea mays]
gi|195635753|gb|ACG37345.1| hypothetical protein [Zea mays]
Length = 342
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ P KQ+PCGH FH++CI W+ L +SCPVCR
Sbjct: 182 AVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSSCPVCR 238
>gi|449466270|ref|XP_004150849.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis
sativus]
gi|449488131|ref|XP_004157947.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis
sativus]
Length = 115
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 53 TNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
T S+ V+ PTV A C VC+++F GKQ+PCGHV+H +CIS+W+++++ CP+C
Sbjct: 42 TPSDSPVADFPTVVA--DVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC 99
Query: 113 RSGV 116
R V
Sbjct: 100 RCLV 103
>gi|413956193|gb|AFW88842.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 278
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA C VC E F G+++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGGGAHCAVCQEAFEPGAAGREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|242041433|ref|XP_002468111.1| hypothetical protein SORBIDRAFT_01g039760 [Sorghum bicolor]
gi|241921965|gb|EER95109.1| hypothetical protein SORBIDRAFT_01g039760 [Sorghum bicolor]
Length = 275
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA C VC E F G+++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGGGAHCAVCQEAFEPGAAGREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|356520915|ref|XP_003529105.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 307
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+P V E C VCMENF +++PCGHV+H+ CI W+S+ NS
Sbjct: 135 SKAAIESMPVVKILASHTYAESHCAVCMENFEINCDAREMPCGHVYHSECIVPWLSVRNS 194
Query: 109 CPVCRSGV 116
CPVCR V
Sbjct: 195 CPVCRHEV 202
>gi|195658671|gb|ACG48803.1| protein binding protein [Zea mays]
Length = 278
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA C VC E F G+++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGGGAHCAVCQEAFEPGAAGREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|219362643|ref|NP_001136765.1| uncharacterized LOC100216907 [Zea mays]
gi|194696968|gb|ACF82568.1| unknown [Zea mays]
gi|414866063|tpg|DAA44620.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 278
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA C VC E F G+++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGGGAHCAVCQEAFEPGAAGREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|326502410|dbj|BAJ95268.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++ VS+ A +C VCM++FL KQ+PC HVFH CI W+ L +SCPVCR
Sbjct: 186 DVAVSADMMAADGGAQCAVCMDDFLLGAAAKQLPCNHVFHKDCILPWLDLHSSCPVCR 243
>gi|297846702|ref|XP_002891232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337074|gb|EFH67491.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 326
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 55 SELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
SE T+ +LP+V T +CTVCME F+ ++PC H++H CI W+ L N
Sbjct: 199 SEPTIEALPSVKITPQHLTNDLTQCTVCMEEFIVGGDATELPCKHIYHKDCIIPWLRLHN 258
Query: 108 SCPVCRSGV 116
SCP+CRS +
Sbjct: 259 SCPICRSDL 267
>gi|147783582|emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]
Length = 409
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPG 85
L+E + +T P P + D N+ TV PT + C VC E F
Sbjct: 194 LNELIEELTQNDRPGP----PPAPDSAINAMPTVKITPTHLINDSHCPVCKEEFKVGEEV 249
Query: 86 KQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+++PC HV+H+ CI W+ L NSCPVCR V
Sbjct: 250 RELPCNHVYHSDCIVPWLQLHNSCPVCRHEV 280
>gi|357462645|ref|XP_003601604.1| RING finger protein [Medicago truncatula]
gi|355490652|gb|AES71855.1| RING finger protein [Medicago truncatula]
Length = 352
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
V SLPTV E +C+VC+++F K++PC H FH+ CI W+ L +SCPVCRS
Sbjct: 218 AVESLPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRS 275
>gi|413942336|gb|AFW74985.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 348
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V ++P +VAA + C VC E F +++PC H++HA CI W++L NSCPVC
Sbjct: 149 SKAAVQAMPVVSVAAADAHCAVCKEAFHLGAEAREMPCAHIYHADCILPWLALRNSCPVC 208
Query: 113 R 113
R
Sbjct: 209 R 209
>gi|356553830|ref|XP_003545254.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 49 HDGQTN---SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCI 99
HD Q++ S+ V SLP + A E C VC E F K++PC H++HA CI
Sbjct: 155 HDQQSHAPASKSAVESLPAIEINATHTAIESHCAVCKEPFELCTMAKEMPCKHIYHAECI 214
Query: 100 STWISLSNSCPVCR 113
W+++ NSCPVCR
Sbjct: 215 LPWLAIKNSCPVCR 228
>gi|11994207|dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
Length = 386
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + +LPTV T+ +C VCM+ F KQ+PC HVFH
Sbjct: 238 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 297
Query: 96 ATCISTWISLSNSCPVCR 113
C+ W+ L NSCPVCR
Sbjct: 298 QDCLLPWLELHNSCPVCR 315
>gi|297740342|emb|CBI30524.3| unnamed protein product [Vitis vinifera]
Length = 470
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V SLPT+ +E C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 304 SKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNS 363
Query: 109 CPVCR 113
CPVCR
Sbjct: 364 CPVCR 368
>gi|15231003|ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana]
gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName:
Full=RING finger protein 1
gi|20465263|gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana]
gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19 [Arabidopsis thaliana]
gi|332642790|gb|AEE76311.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis
thaliana]
Length = 328
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + +LPTV T+ +C VCM+ F KQ+PC HVFH
Sbjct: 180 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 239
Query: 96 ATCISTWISLSNSCPVCR 113
C+ W+ L NSCPVCR
Sbjct: 240 QDCLLPWLELHNSCPVCR 257
>gi|115476794|ref|NP_001061993.1| Os08g0464400 [Oryza sativa Japonica Group]
gi|42409383|dbj|BAD10697.1| unknown protein [Oryza sativa Japonica Group]
gi|113623962|dbj|BAF23907.1| Os08g0464400 [Oryza sativa Japonica Group]
Length = 211
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 62 LPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
LPTV +E C +C ++ A P +++PCGH++H+ CI W+ + NSCPVCRS
Sbjct: 62 LPTVEVSEPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRS 116
>gi|223975445|gb|ACN31910.1| unknown [Zea mays]
Length = 335
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV E C+VC+E+F KQ+PC H FH+ CI W+ L +SCP+CR
Sbjct: 203 VAALPTVNIEEALGCSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICR 258
>gi|15232595|ref|NP_190246.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|6523065|emb|CAB62332.1| putative protein [Arabidopsis thaliana]
gi|20260608|gb|AAM13202.1| putative protein [Arabidopsis thaliana]
gi|31711884|gb|AAP68298.1| At3g46620 [Arabidopsis thaliana]
gi|110735080|gb|ABG89110.1| ubiquitin-interacting factor 1a [synthetic construct]
gi|332644663|gb|AEE78184.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 395
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLP V E C VC E F G+++PC H+FH CI W+S+ NS
Sbjct: 192 SKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNS 251
Query: 109 CPVCR 113
CPVCR
Sbjct: 252 CPVCR 256
>gi|125561815|gb|EAZ07263.1| hypothetical protein OsI_29509 [Oryza sativa Indica Group]
Length = 211
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 62 LPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
LPTV +E C +C ++ A P +++PCGH++H+ CI W+ + NSCPVCRS
Sbjct: 62 LPTVEVSEPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRS 116
>gi|297610691|ref|NP_001064906.2| Os10g0487400 [Oryza sativa Japonica Group]
gi|255679510|dbj|BAF26820.2| Os10g0487400 [Oryza sativa Japonica Group]
Length = 304
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 65 VAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
VAA +G C VC E+F KQ+PC H++HA CI W+ L NSCP+CR
Sbjct: 162 VAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICR 211
>gi|413953615|gb|AFW86264.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413953616|gb|AFW86265.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 310
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ V+SLP VA + +C VCM++F KQ+PC HVF
Sbjct: 142 ENDPNRYGTPPAAKAAVASLPDVAVSADMMQADGGAQCAVCMDDFHLGAAAKQLPCKHVF 201
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L +SCPVCR
Sbjct: 202 HKDCIVPWLDLHSSCPVCR 220
>gi|125575202|gb|EAZ16486.1| hypothetical protein OsJ_31957 [Oryza sativa Japonica Group]
Length = 336
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 65 VAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
VAA +G C VC E+F KQ+PC H++HA CI W+ L NSCP+CR
Sbjct: 194 VAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICR 243
>gi|356566529|ref|XP_003551483.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 312
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 59 VSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
V L + E C VCMENF +++PCGHV+H+ CI W+S+ NSCPVCR V
Sbjct: 146 VKILASHTYAESHCAVCMENFEINCDAREMPCGHVYHSECIVPWLSVRNSCPVCRHEV 203
>gi|449489888|ref|XP_002190829.2| PREDICTED: E3 ubiquitin-protein ligase RNF115-like, partial
[Taeniopygia guttata]
Length = 142
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ +SSLPTV T+ + C VC E++
Sbjct: 36 QLLGQLENTGPPPADKEK-------------ISSLPTVLVTQEQVDTGLECPVCKEDYAV 82
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A +Q+PC HVFH++CI W+ L ++CPVCR +
Sbjct: 83 AEQVRQLPCNHVFHSSCIVPWLELHDTCPVCRKSL 117
>gi|226494941|ref|NP_001148613.1| LOC100282229 [Zea mays]
gi|195620824|gb|ACG32242.1| RING finger protein 126 [Zea mays]
Length = 371
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV E C+VC+E+F KQ+PC H FH+ CI W+ L +SCP+CR
Sbjct: 239 VAALPTVNIEEALGCSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICR 294
>gi|297830662|ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329053|gb|EFH59472.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + LPTV T+ +C VCM+ F KQ+PC HVFH
Sbjct: 182 ENDPNRYGTPPASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 241
Query: 96 ATCISTWISLSNSCPVCR 113
C+ W+ L NSCPVCR
Sbjct: 242 QDCLLPWLQLHNSCPVCR 259
>gi|194700678|gb|ACF84423.1| unknown [Zea mays]
gi|413932667|gb|AFW67218.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 371
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV E C+VC+E+F KQ+PC H FH+ CI W+ L +SCP+CR
Sbjct: 239 VAALPTVNIEEALGCSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICR 294
>gi|2982466|emb|CAA18230.1| putative protein [Arabidopsis thaliana]
gi|7269492|emb|CAB79495.1| putative protein [Arabidopsis thaliana]
Length = 344
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV +E +C++C+++F + K++PC H FH CI W+ L +SCPVCR
Sbjct: 214 VVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCR 270
>gi|356499821|ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 231
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-- 70
+ G +ID +L+ TN P P S + ++ +LP+V EG
Sbjct: 67 LTQGMVVIDGGSSLEALFREFTNGKGGRP----PASKE-------SIEALPSVEIGEGNE 115
Query: 71 --RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 116 DSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHGSCPVCR 160
>gi|147861903|emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
Length = 364
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V SLPT+ +E C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 163 SKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNS 222
Query: 109 CPVCR 113
CPVCR
Sbjct: 223 CPVCR 227
>gi|255626575|gb|ACU13632.1| unknown [Glycine max]
Length = 187
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-- 70
+ G +ID +L+ TN P P S + ++ +LP+V EG
Sbjct: 67 LTQGMVVIDGGSSLEALFREFTNGKGGRP----PASKE-------SIEALPSVEIGEGNE 115
Query: 71 --RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 116 DSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHGSCPVCR 160
>gi|222640697|gb|EEE68829.1| hypothetical protein OsJ_27603 [Oryza sativa Japonica Group]
Length = 449
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 62 LPTVAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
LPTV +E C +C ++ A P +++PCGH++H+ CI W+ + NSCPVCRS
Sbjct: 300 LPTVEVSEPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRS 354
>gi|242066120|ref|XP_002454349.1| hypothetical protein SORBIDRAFT_04g029220 [Sorghum bicolor]
gi|241934180|gb|EES07325.1| hypothetical protein SORBIDRAFT_04g029220 [Sorghum bicolor]
Length = 320
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 8 AINTNIVSGSPIID---ESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPT 64
++ + V G +D E++ LD+A ++ + +P G+ ++ V +LPT
Sbjct: 157 SLGSLAVDGDDDLDAGIETYFLDDADDLLFGQLAAADADHEPPGKCGRPAAKAAVEALPT 216
Query: 65 V--AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V A + +C VC + +++PC H++H CI W+++ N+CP+CR
Sbjct: 217 VVVAEADAQCAVCKDGVEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCR 267
>gi|297799364|ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313402|gb|EFH43825.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFP 84
LD L + + ST H + V +LPTV +E +C++C+++F +
Sbjct: 203 LDHLLEHLADNDST--------RHGSLPARKEAVENLPTVKISESLQCSICLDDFDKGSE 254
Query: 85 GKQVPCGHVFHATCISTWISLSNSCPVCR 113
K++PC H FH CI W+ L +SCPVCR
Sbjct: 255 AKEMPCKHKFHIRCIVPWLELHSSCPVCR 283
>gi|18087865|gb|AAL59019.1|AC087182_2 putative zinc finger protein [Oryza sativa Japonica Group]
gi|31432769|gb|AAP54362.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|215734849|dbj|BAG95571.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 370
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 65 VAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
VAA +G C VC E+F KQ+PC H++HA CI W+ L NSCP+CR
Sbjct: 228 VAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICR 277
>gi|251829631|gb|ACT21194.1| zinc finger protein [Carica papaya]
Length = 340
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVA-------ATEGRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P H S+ + +LPT+ + +C VC ++F A KQ+PC H++H
Sbjct: 163 ENDPNRHGTPPASKSAIEALPTIKIFQEMPDSDSSQCAVCKDSFALAEEAKQMPCKHIYH 222
Query: 96 ATCISTWISLSNSCPVCR 113
+ CI W+ L NSCPVCR
Sbjct: 223 SQCILPWLELHNSCPVCR 240
>gi|225440416|ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
vinifera]
Length = 365
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V SLPT+ +E C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 164 SKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNS 223
Query: 109 CPVCR 113
CPVCR
Sbjct: 224 CPVCR 228
>gi|22328949|ref|NP_194370.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30687206|ref|NP_849554.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|20466682|gb|AAM20658.1| putative protein [Arabidopsis thaliana]
gi|23198194|gb|AAN15624.1| putative protein [Arabidopsis thaliana]
gi|222424453|dbj|BAH20182.1| AT4G26400 [Arabidopsis thaliana]
gi|332659793|gb|AEE85193.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659794|gb|AEE85194.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 356
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV +E +C++C+++F + K++PC H FH CI W+ L +SCPVCR
Sbjct: 226 VVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCR 282
>gi|356531052|ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max]
gi|356531054|ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Glycine max]
Length = 376
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ V LP V+ TE +C VC + F KQ+PC H++H
Sbjct: 168 ENDPNRYGTPPASKSAVEGLPDVSVTEELLASDSSQCAVCKDTFELGETAKQIPCKHIYH 227
Query: 96 ATCISTWISLSNSCPVCR 113
A CI W+ L NSCPVCR
Sbjct: 228 ADCILPWLELHNSCPVCR 245
>gi|225459511|ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 333
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPG 85
L+E + +T P P + D N+ TV PT + C VC E F
Sbjct: 194 LNELIEELTQNDRPGP----PPAPDSAINAMPTVKITPTHLINDSHCPVCKEEFKVGEEV 249
Query: 86 KQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+++PC HV+H+ CI W+ L NSCPVCR V
Sbjct: 250 RELPCNHVYHSDCIVPWLQLHNSCPVCRHEV 280
>gi|356561816|ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 369
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ V LP V+ TE +C VC + F KQ+PC H++H
Sbjct: 167 ENDPNRYGTPPASKSVVEGLPDVSVTEELLASDSSQCAVCKDTFELGETAKQIPCKHIYH 226
Query: 96 ATCISTWISLSNSCPVCR 113
A CI W+ L NSCPVCR
Sbjct: 227 ADCILPWLELHNSCPVCR 244
>gi|297819226|ref|XP_002877496.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323334|gb|EFH53755.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E C VC E F G+++PC H+FH CI W+S+ NSCPVCR
Sbjct: 208 EANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 252
>gi|356537930|ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 393
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLPT+ A E C VC E F + +++PC H++H CI W++L NS
Sbjct: 162 SKAAIDSLPTIEIDDTHLAMESHCAVCKEAFETSTAVREMPCKHIYHPECILPWLALHNS 221
Query: 109 CPVCR 113
CPVCR
Sbjct: 222 CPVCR 226
>gi|302141841|emb|CBI19044.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPG 85
L+E + +T P P + D N+ TV PT + C VC E F
Sbjct: 164 LNELIEELTQNDRPGP----PPAPDSAINAMPTVKITPTHLINDSHCPVCKEEFKVGEEV 219
Query: 86 KQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+++PC HV+H+ CI W+ L NSCPVCR V
Sbjct: 220 RELPCNHVYHSDCIVPWLQLHNSCPVCRHEV 250
>gi|242094340|ref|XP_002437660.1| hypothetical protein SORBIDRAFT_10g000250 [Sorghum bicolor]
gi|241915883|gb|EER89027.1| hypothetical protein SORBIDRAFT_10g000250 [Sorghum bicolor]
Length = 321
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ V+SLP VA + +C VCM++F KQ+PC HVF
Sbjct: 147 ENDPNRYGTPPAAKSAVASLPDVAVSADMMQADGGAQCAVCMDDFHLGAAAKQLPCKHVF 206
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L +SCPVCR
Sbjct: 207 HKDCILPWLDLHSSCPVCR 225
>gi|15241188|ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|10177832|dbj|BAB11261.1| unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis thaliana]
gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis thaliana]
gi|332009368|gb|AED96751.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 396
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E +C+VC+++F + K++PC H FH CI W+ L +SCPVCR
Sbjct: 245 VEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCR 300
>gi|226493687|ref|NP_001152117.1| RHC1A [Zea mays]
gi|195652783|gb|ACG45859.1| RHC1A [Zea mays]
gi|414870991|tpg|DAA49548.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ +SSLP VAA EG C VC E+F KQ+PC H++
Sbjct: 201 ENDPNRYGTPPAAKSALSSLPDVVVTHTMVAAAEGAECAVCKEDFSPGEVAKQMPCNHIY 260
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L NSCP+CR
Sbjct: 261 HTDCIMPWLELHNSCPICR 279
>gi|357110976|ref|XP_003557291.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 338
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVA------ATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
V++LP VA A +G +C VCM++F KQ+PC HVFH CI W+ L +SC
Sbjct: 182 AVAALPDVAVSATMMAADGGAQCAVCMDDFELGASAKQLPCKHVFHKDCILPWLDLHSSC 241
Query: 110 PVCR 113
PVCR
Sbjct: 242 PVCR 245
>gi|194696852|gb|ACF82510.1| unknown [Zea mays]
gi|413932666|gb|AFW67217.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 147
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV E C+VC+E+F KQ+PC H FH+ CI W+ L +SCP+CR
Sbjct: 15 VAALPTVNIEEALGCSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICR 70
>gi|115465860|ref|NP_001056529.1| Os06g0101300 [Oryza sativa Japonica Group]
gi|55296657|dbj|BAD69377.1| putative ring finger protein 126 isoform 1 [Oryza sativa Japonica
Group]
gi|55296745|dbj|BAD67937.1| putative ring finger protein 126 isoform 1 [Oryza sativa Japonica
Group]
gi|113594569|dbj|BAF18443.1| Os06g0101300 [Oryza sativa Japonica Group]
gi|125595737|gb|EAZ35517.1| hypothetical protein OsJ_19796 [Oryza sativa Japonica Group]
gi|215768482|dbj|BAH00711.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 338
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVA------ATEG--RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ V++LP VA A +G +C VCM++F KQ+PC HVF
Sbjct: 165 ENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDDFHLGAAAKQLPCKHVF 224
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L +SCPVCR
Sbjct: 225 HKDCILPWLDLHSSCPVCR 243
>gi|413932665|gb|AFW67216.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 147
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV E C+VC+E+F KQ+PC H FH+ CI W+ L +SCP+CR
Sbjct: 15 VAALPTVNIEEALGCSVCLEDFEMGGEAKQMPCQHKFHSHCILPWLELHSSCPICR 70
>gi|125532427|gb|EAY78992.1| hypothetical protein OsI_34100 [Oryza sativa Indica Group]
Length = 370
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 65 VAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
VAA +G C VC E+F KQ+PC H++HA CI W+ L NSCP+CR
Sbjct: 228 VAAADGAECAVCKEDFSPGEGAKQMPCKHMYHADCIMPWLDLHNSCPICR 277
>gi|195622550|gb|ACG33105.1| RHC1A [Zea mays]
Length = 385
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ +SSLP VAA EG C VC E+F KQ+PC H++
Sbjct: 211 ENDPNRYGTPPAAKSALSSLPDVLVTHAMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIY 270
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L NSCP+CR
Sbjct: 271 HTDCIVPWLELHNSCPICR 289
>gi|115452185|ref|NP_001049693.1| Os03g0271600 [Oryza sativa Japonica Group]
gi|29893617|gb|AAP06871.1| unknown protein [Oryza sativa Japonica Group]
gi|108707422|gb|ABF95217.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113548164|dbj|BAF11607.1| Os03g0271600 [Oryza sativa Japonica Group]
gi|215695129|dbj|BAG90320.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA + C VC E F +++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGSGAHCAVCQEAFEPGASAREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|125585750|gb|EAZ26414.1| hypothetical protein OsJ_10299 [Oryza sativa Japonica Group]
Length = 188
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA + C VC E F +++PC HV+H CI W+SL NSCPVC
Sbjct: 25 SKAAVESMPSVTVAGSGAHCAVCQEAFEPGASAREMPCKHVYHQDCILPWLSLRNSCPVC 84
Query: 113 RS 114
R
Sbjct: 85 RR 86
>gi|194700338|gb|ACF84253.1| unknown [Zea mays]
Length = 234
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 58 TVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+SSLP VAA EG C VC E+F KQ+PC H++H CI W+ L NSC
Sbjct: 75 ALSSLPDVVVTHTMVAAAEGAECAVCKEDFSPGEVAKQMPCNHIYHTDCIMPWLELHNSC 134
Query: 110 PVCR 113
P+CR
Sbjct: 135 PICR 138
>gi|357124388|ref|XP_003563882.1| PREDICTED: uncharacterized protein LOC100832937 [Brachypodium
distachyon]
Length = 399
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHV 93
N S TPP + + +V++LPTV E CTVC+E F K++PC H
Sbjct: 258 NRSGTPPAKKE------------SVAALPTVNIQEILGCTVCLEEFEMGTEAKEMPCQHK 305
Query: 94 FHATCISTWISLSNSCPVCR 113
FH+ CI W+ L +SCP+CR
Sbjct: 306 FHSHCILPWLELHSSCPICR 325
>gi|212276043|ref|NP_001130953.1| uncharacterized LOC100192058 [Zea mays]
gi|194690542|gb|ACF79355.1| unknown [Zea mays]
gi|413933975|gb|AFW68526.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 385
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ +SSLP VAA EG C VC E+F KQ+PC H++
Sbjct: 211 ENDPNRYGTPPAAKSVLSSLPDVLVTHAMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIY 270
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L NSCP+CR
Sbjct: 271 HTDCIVPWLELHNSCPICR 289
>gi|125543283|gb|EAY89422.1| hypothetical protein OsI_10929 [Oryza sativa Indica Group]
Length = 279
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V S+P TVA + C VC E F +++PC HV+H CI W+SL NSCPVC
Sbjct: 116 SKAAVESMPSVTVAGSGAHCAVCQEAFELGASAREMPCKHVYHQDCILPWLSLRNSCPVC 175
Query: 113 R 113
R
Sbjct: 176 R 176
>gi|242039309|ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [Sorghum bicolor]
gi|241920903|gb|EER94047.1| hypothetical protein SORBIDRAFT_01g018800 [Sorghum bicolor]
Length = 398
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ +SSLP VAA EG C VC E+F KQ+PC H++
Sbjct: 220 ENDPNRYGTPPAAKSALSSLPDVVVTHTMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIY 279
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L NSCP+CR
Sbjct: 280 HTDCIVPWLELHNSCPICR 298
>gi|224135455|ref|XP_002327222.1| predicted protein [Populus trichocarpa]
gi|222835592|gb|EEE74027.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 19 IIDESFNLDEALTMITNTSS---TPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVC 75
+++ F+ D +T+ T S+ ++++ + GQ+N + +++ G C VC
Sbjct: 136 VVEPIFDTDRHVTVSTGASNRVLKKLEKERFYTKQGQSNGD---------SSSSGTCVVC 186
Query: 76 MENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+E+F + ++PC HVFH CI W+ S SCP+CRS V
Sbjct: 187 LEDFSSSVKLSKLPCSHVFHEKCIFRWVLNSKSCPLCRSQV 227
>gi|297793133|ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP + + V +LPTV E +C+VC+++F + K++PC H
Sbjct: 231 NRQGTPPARKE------------AVEALPTVKIMEPLQCSVCLDDFEKGTEAKELPCKHK 278
Query: 94 FHATCISTWISLSNSCPVCR 113
FH CI W+ L +SCPVCR
Sbjct: 279 FHIRCIVPWLELHSSCPVCR 298
>gi|224066851|ref|XP_002302246.1| predicted protein [Populus trichocarpa]
gi|222843972|gb|EEE81519.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 56 ELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E+ + ++PTV + C VCME F +++PC H++H+ CI W+ L NSC
Sbjct: 213 EIAIDTIPTVKIEASHLVNDSHCPVCMEEFKVGGEARELPCKHIYHSECIVPWLRLHNSC 272
Query: 110 PVCRS 114
PVCR
Sbjct: 273 PVCRK 277
>gi|218197389|gb|EEC79816.1| hypothetical protein OsI_21260 [Oryza sativa Indica Group]
Length = 221
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVA------ATEG--RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ V++LP VA A +G +C VCM++F KQ+PC HVF
Sbjct: 48 ENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDDFHLGAAAKQLPCKHVF 107
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L +SCPVCR
Sbjct: 108 HKDCILPWLDLHSSCPVCR 126
>gi|302595801|sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
finger protein 1
gi|298155591|gb|ADI58769.1| RING-type ubiquitin E3 ligase [Gossypium hirsutum]
Length = 338
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + +LP V T+ +C VCM++F + KQ+PC H++H
Sbjct: 188 ENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYH 247
Query: 96 ATCISTWISLSNSCPVCR 113
C+ W+ L NSCPVCR
Sbjct: 248 KDCLLPWLELHNSCPVCR 265
>gi|115442519|ref|NP_001045539.1| Os01g0972000 [Oryza sativa Japonica Group]
gi|57899217|dbj|BAD87366.1| RING-H2 finger protein-like [Oryza sativa Japonica Group]
gi|113535070|dbj|BAF07453.1| Os01g0972000 [Oryza sativa Japonica Group]
gi|125573478|gb|EAZ14993.1| hypothetical protein OsJ_04929 [Oryza sativa Japonica Group]
gi|215741003|dbj|BAG97498.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 334
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ A + C VC E F A +++PC H++H CI W++L NS
Sbjct: 108 SKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILPWLALHNS 167
Query: 109 CPVCR 113
CPVCR
Sbjct: 168 CPVCR 172
>gi|224125900|ref|XP_002319703.1| predicted protein [Populus trichocarpa]
gi|222858079|gb|EEE95626.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V ++PTV+ T+ +C+VC+E F K++PC H FH CI W+ L +SCPVCR
Sbjct: 211 VKAMPTVSITQNLQCSVCLEEFDIGCEAKEMPCKHKFHGECIVPWLELHSSCPVCR 266
>gi|147806280|emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
Length = 1218
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 275 SKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNS 334
Query: 109 CPVCR 113
CPVCR
Sbjct: 335 CPVCR 339
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C++C+E + + +PC H FHA CI W+ +CPVC+ V A
Sbjct: 872 CSICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRVGA 918
>gi|449459896|ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 383
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PT+ ATE C VC E F +++PC H++H CI W+S+ NS
Sbjct: 165 SKAAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNS 224
Query: 109 CPVCR 113
CPVCR
Sbjct: 225 CPVCR 229
>gi|449503271|ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 380
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PT+ ATE C VC E F +++PC H++H CI W+S+ NS
Sbjct: 162 SKAAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNS 221
Query: 109 CPVCR 113
CPVCR
Sbjct: 222 CPVCR 226
>gi|224109492|ref|XP_002315214.1| predicted protein [Populus trichocarpa]
gi|222864254|gb|EEF01385.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV TE C VC E F +++PC H++H CI W+S+ NS
Sbjct: 176 SKSAIESMPTVIINESHTFTESHCAVCKEAFELESEAREMPCKHIYHTDCILPWLSIRNS 235
Query: 109 CPVCR 113
CPVCR
Sbjct: 236 CPVCR 240
>gi|357112908|ref|XP_003558247.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 278
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 55 SELTVSSLPTVAATEG---RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
S+ V S+P+V G C VC E F +++PC HV+H CI W+SL NSCP+
Sbjct: 115 SKAAVESMPSVTVAGGGGAHCAVCQEAFEPGAAAREMPCKHVYHQDCILPWLSLRNSCPI 174
Query: 112 CRS 114
CRS
Sbjct: 175 CRS 177
>gi|225449444|ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 361
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + ++PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 153 SKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNS 212
Query: 109 CPVCR 113
CPVCR
Sbjct: 213 CPVCR 217
>gi|326502862|dbj|BAJ99059.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502908|dbj|BAJ99082.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530360|dbj|BAJ97606.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 55 SELTVSSLPTVAATEG---RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
S+ V S+P+V G C VC E F +++PC HV+H CI W+SL NSCP+
Sbjct: 117 SKAAVESMPSVTVAGGAGAHCAVCQEAFEPGAAAREMPCKHVYHQDCILPWLSLRNSCPI 176
Query: 112 CRS 114
CRS
Sbjct: 177 CRS 179
>gi|356538988|ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 361
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV TE C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 161 SKAAIESMPTVEIGETHVETEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNS 220
Query: 109 CPVCR 113
CPVCR
Sbjct: 221 CPVCR 225
>gi|225434879|ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 165 SKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNS 224
Query: 109 CPVCR 113
CPVCR
Sbjct: 225 CPVCR 229
>gi|356567978|ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 344
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + + +LPTV E +C+VC+++F K++PC H
Sbjct: 211 NRYGTPPAQKE------------AIEALPTVIINENSQCSVCLDDFEVGSEAKEMPCKHR 258
Query: 94 FHATCISTWISLSNSCPVCR 113
FH+ CI W+ L +SCPVCR
Sbjct: 259 FHSGCILPWLELHSSCPVCR 278
>gi|125529290|gb|EAY77404.1| hypothetical protein OsI_05393 [Oryza sativa Indica Group]
Length = 332
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ A + C VC E F A +++PC H++H CI W++L NS
Sbjct: 108 SKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHHCILPWLALHNS 167
Query: 109 CPVCR 113
CPVCR
Sbjct: 168 CPVCR 172
>gi|115456155|ref|NP_001051678.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|32129334|gb|AAP73861.1| unknown protein [Oryza sativa Japonica Group]
gi|40786589|gb|AAR89864.1| putative ring finger protein [Oryza sativa Japonica Group]
gi|108711712|gb|ABF99507.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113550149|dbj|BAF13592.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|125546172|gb|EAY92311.1| hypothetical protein OsI_14036 [Oryza sativa Indica Group]
gi|125588365|gb|EAZ29029.1| hypothetical protein OsJ_13080 [Oryza sativa Japonica Group]
gi|215695293|dbj|BAG90484.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765742|dbj|BAG87439.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 369
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N S TPP + + V +LPTV E C+VC+E+F K++PC H
Sbjct: 229 NRSGTPPAKKE------------AVEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHK 276
Query: 94 FHATCISTWISLSNSCPVCR 113
FH+ CI W+ L +SCP+CR
Sbjct: 277 FHSQCILPWLELHSSCPICR 296
>gi|147821994|emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
Length = 365
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + ++PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 157 SKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNS 216
Query: 109 CPVCR 113
CPVCR
Sbjct: 217 CPVCR 221
>gi|255640658|gb|ACU20614.1| unknown [Glycine max]
Length = 188
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + + +LPTV E +C+VC+++F K++PC H
Sbjct: 55 NRYGTPPAQKE------------AIEALPTVIINENSQCSVCLDDFEVGSEAKEMPCKHR 102
Query: 94 FHATCISTWISLSNSCPVCR 113
FH+ CI W+ L +SCPVCR
Sbjct: 103 FHSGCILPWLELHSSCPVCR 122
>gi|224118084|ref|XP_002317728.1| predicted protein [Populus trichocarpa]
gi|222858401|gb|EEE95948.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ V +LP + T+ +C VC ++F KQ+PC H++H
Sbjct: 165 ENDPNRYGTPPASKSAVENLPDIKVTKELLESDSSQCAVCKDSFELGEEAKQIPCKHIYH 224
Query: 96 ATCISTWISLSNSCPVCR 113
CI+ W+ L NSCPVCR
Sbjct: 225 KDCITPWLELHNSCPVCR 242
>gi|356497902|ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 229
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-- 70
+ G +ID +L+ + N P P S + ++ +LP+V E
Sbjct: 65 LTQGMVVIDGGLSLEALFRELANGKGGRP----PASKE-------SIEALPSVEIGEDNE 113
Query: 71 --RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 114 DLECVVCLEEFGVGGVAKEMPCKHRFHVNCIEKWLGMHGSCPVCR 158
>gi|357146733|ref|XP_003574092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 366
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLP-------TVAATEG-RCTVCMENFLQAFPGKQVPCGHVF 94
++ P + ++ +S+LP VAA EG C VC E+F KQ+PC H++
Sbjct: 196 ENDPNRYGTPPAAKSALSTLPDVVVTDSMVAAAEGAECAVCKEDFSPGEGAKQMPCKHIY 255
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ L NSCP+CR
Sbjct: 256 HDYCIVPWLELHNSCPICR 274
>gi|297746042|emb|CBI16098.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 281 SKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNS 340
Query: 109 CPVCR 113
CPVCR
Sbjct: 341 CPVCR 345
>gi|255568972|ref|XP_002525456.1| zinc finger protein, putative [Ricinus communis]
gi|223535269|gb|EEF36946.1| zinc finger protein, putative [Ricinus communis]
Length = 348
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
++ P + + V ++PT+A + C+VC+E F K++PC H FH+ CI
Sbjct: 192 ENDPNRYGTLPAQKKAVKAMPTIAVEQNAECSVCLEEFEIGGEAKEMPCKHKFHSACILP 251
Query: 102 WISLSNSCPVCR 113
W+ L +SCPVCR
Sbjct: 252 WLELHSSCPVCR 263
>gi|356499111|ref|XP_003518387.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 391
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA------ATEGRCTVCMENF 79
+D+ + +N+ DQ H+ S+ V LP++ ATE C VC E F
Sbjct: 141 MDQLSQVESNSGMGSNDQ-----HNHAPASKSAVELLPSIEIDETHTATESHCAVCKEPF 195
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ K++PC H++HA CI W+++ NSCPVCR
Sbjct: 196 ELSTMAKEMPCKHIYHAECILPWLAIKNSCPVCR 229
>gi|224144768|ref|XP_002325407.1| predicted protein [Populus trichocarpa]
gi|222862282|gb|EEE99788.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V ++PTV+ + +C++C+E F K++PC H FH CI+ W+ L +SCPVCR
Sbjct: 58 AVKAMPTVSINQNLQCSICLEEFEIGSEAKEMPCKHKFHGECIAPWLELHSSCPVCR 114
>gi|357141588|ref|XP_003572278.1| PREDICTED: uncharacterized protein LOC100828707 [Brachypodium
distachyon]
Length = 306
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 58 TVSSLPTVAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+++++PTV +E C +C ++ A +++PCGH++H+ CI W+ + NSCPVCRS
Sbjct: 153 SIAAVPTVEVSETAEVCAICKDDLPLAAAARRLPCGHLYHSDCIVQWLEMRNSCPVCRS 211
>gi|357444887|ref|XP_003592721.1| RING finger protein [Medicago truncatula]
gi|355481769|gb|AES62972.1| RING finger protein [Medicago truncatula]
Length = 315
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V +LPTV + +C VC + F + KQ+PC HV+H C+ W+ L N
Sbjct: 170 SKEAVKNLPTVTVDDALLSSELNQCAVCQDEFEKGMQVKQMPCKHVYHDDCLLPWLELHN 229
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 230 SCPVCR 235
>gi|356561335|ref|XP_003548938.1| PREDICTED: uncharacterized protein LOC100790855 [Glycine max]
Length = 336
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ +LP+V + E +CTVC+E+ K++PC H FH CI +W+ L SCPVCR
Sbjct: 211 AIEALPSVTSEEKLQCTVCLEDVEVGSEAKEMPCKHKFHGDCIVSWLKLHGSCPVCR 267
>gi|291233489|ref|XP_002736685.1| PREDICTED: Rabring 7-like [Saccoglossus kowalevskii]
Length = 324
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCME 77
LD +T + N + PP ++ K + +LPTV T+ C+VC E
Sbjct: 196 LDSIITQLLNNLEGTGPPPAEKDK-----------IQALPTVKITKDDIDHHLDCSVCKE 244
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+F +++PC H+FH CI W+ L N+CPVCR G+
Sbjct: 245 DFKIEEEVRKLPCLHIFHHDCIVPWLELHNTCPVCRKGI 283
>gi|224125824|ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus trichocarpa]
gi|222870634|gb|EEF07765.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 59 VSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V +LP V TE +C VC ++F KQ+PC H++H CI W+ L NSCPV
Sbjct: 180 VENLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPV 239
Query: 112 CR 113
CR
Sbjct: 240 CR 241
>gi|226507528|ref|NP_001147077.1| RING finger protein 126 [Zea mays]
gi|195607098|gb|ACG25379.1| RING finger protein 126 [Zea mays]
Length = 308
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 59 VSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V SL TV E +CTVC+++F K++PC H FH+ C+ W+ L +SCPVCR
Sbjct: 210 VESLETVMVEESLVQCTVCLDDFEIGVEAKEMPCKHKFHSECLLPWLELHSSCPVCR 266
>gi|169806624|ref|XP_001828056.1| transcription factor [Enterocytozoon bieneusi H348]
gi|161779184|gb|EDQ31208.1| transcription factor [Enterocytozoon bieneusi H348]
Length = 306
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 SHDGQTNSELT---VSSLPTVAATEG----RCTVCMENFLQAFPGKQVPCGHVFHATCIS 100
+ D + N EL + LP + TE CT+C+E+F+ + +PC H FH +CI
Sbjct: 213 TFDPEFNIELIRNEIEKLPEIEYTENINSKECTICLESFILKDKMRVLPCNHCFHTSCID 272
Query: 101 TWISLSNSCPVCRSGV 116
W+ S +CP+CR V
Sbjct: 273 NWLLTSLNCPICRKSV 288
>gi|224073116|ref|XP_002303979.1| predicted protein [Populus trichocarpa]
gi|222841411|gb|EEE78958.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + + +LPTV E +C+VC+++F +++PC H
Sbjct: 213 NRYGTPPAQKE------------AIEALPTVTVKEPLQCSVCLDDFEIGAEAREMPCKHK 260
Query: 94 FHATCISTWISLSNSCPVCR 113
FH+ CI W+ L +SCPVCR
Sbjct: 261 FHSGCILPWLELHSSCPVCR 280
>gi|242086595|ref|XP_002439130.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor]
gi|241944415|gb|EES17560.1| hypothetical protein SORBIDRAFT_09g001100 [Sorghum bicolor]
Length = 413
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+P V+ A + C VC E F +++PC H++HA CI W+++ NS
Sbjct: 193 SKAAVESMPVVSVGASHVAADAHCAVCKEAFELGAEAREMPCAHIYHADCILPWLAIRNS 252
Query: 109 CPVCR 113
CPVCR
Sbjct: 253 CPVCR 257
>gi|125535731|gb|EAY82219.1| hypothetical protein OsI_37424 [Oryza sativa Indica Group]
Length = 199
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 55 SELTVSSLPTVAATEGR---CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
S ++ L A+E R C VC+E+F +++PC H FHATCI W+ LS+ CP+
Sbjct: 128 SSKAMAELQEAMASEARESDCAVCLEDFEAGEKLRRMPCSHCFHATCILDWLRLSHRCPL 187
Query: 112 CR 113
CR
Sbjct: 188 CR 189
>gi|255546335|ref|XP_002514227.1| zinc finger protein, putative [Ricinus communis]
gi|223546683|gb|EEF48181.1| zinc finger protein, putative [Ricinus communis]
Length = 109
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 19 IIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTN-SELTVSSLPTVAAT----EGRCT 73
IID SF+++E LT+ P + Q + S V+++P V+ + + C+
Sbjct: 17 IIDVSFDMEECLTL-------------PHNFLHQISVSNSLVANMPMVSVSTEDDDSVCS 63
Query: 74 VCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
VCME F GKQV CGHV+HA CIS+W+S S+SCP+CR +
Sbjct: 64 VCMEGFQSDMGGKQVQCGHVYHAACISSWLSNSSSCPLCRFNIFG 108
>gi|255559030|ref|XP_002520538.1| zinc finger protein, putative [Ricinus communis]
gi|223540380|gb|EEF41951.1| zinc finger protein, putative [Ricinus communis]
Length = 318
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+P V A E C VC E F +++PC H++H+ CI W++L NS
Sbjct: 176 SKAVVESMPIVDVTDAHVAAEAHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLALRNS 235
Query: 109 CPVCR 113
CPVCR
Sbjct: 236 CPVCR 240
>gi|121583717|ref|NP_001073542.1| RING finger protein 115 [Danio rerio]
gi|118764169|gb|AAI28880.1| Zgc:158455 [Danio rerio]
Length = 310
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV T+ C VC E++ P +Q+PC H FH+ CI W+ L ++CPVC
Sbjct: 219 ISSLPTVIITQEHTDCNMECPVCKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVC 278
Query: 113 RSGV 116
R +
Sbjct: 279 RKSL 282
>gi|125583811|gb|EAZ24742.1| hypothetical protein OsJ_08513 [Oryza sativa Japonica Group]
Length = 337
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 58 TVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ SLPTV T +C VC E+F +Q+PC HV+H+ CI W+ L NSCPV
Sbjct: 179 AIDSLPTVQITGAHLSDGSQCPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPV 238
Query: 112 CRSGVIA 118
CR +++
Sbjct: 239 CRYQLLS 245
>gi|389612990|dbj|BAM19885.1| unknown unsecreted protein [Papilio xuthus]
Length = 134
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLPTVA-ATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V++LP + TEG+ C +C+++F K++PC H FH TCI TW++ +NSCP C
Sbjct: 50 SKEVVNNLPEITIDTEGKNCPICLKDFKINEKAKKLPCEHFFHPTCILTWLNKTNSCPFC 109
Query: 113 R 113
R
Sbjct: 110 R 110
>gi|255581547|ref|XP_002531579.1| zinc finger protein, putative [Ricinus communis]
gi|223528809|gb|EEF30815.1| zinc finger protein, putative [Ricinus communis]
Length = 335
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV +TE C VC E F +++PC H++H CI W+S+ NS
Sbjct: 164 SKSAIESMPTVIINEMHTSTESHCAVCKEAFELDSEAREMPCKHIYHNECILPWLSIRNS 223
Query: 109 CPVCR 113
CPVCR
Sbjct: 224 CPVCR 228
>gi|118486636|gb|ABK95155.1| unknown [Populus trichocarpa]
Length = 212
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE--- 69
+ G +I+ + +L+ L I N + PP S+ ++ ++P+V E
Sbjct: 51 LTQGMVVIEGAASLESLLRDIGNKNGQPP------------ASKASIEAMPSVEIGEDNK 98
Query: 70 -GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
G C +C+E + K++PC H FH C+ W+ + +CPVCR
Sbjct: 99 DGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCR 143
>gi|307215342|gb|EFN90054.1| TRAF-interacting protein [Harpegnathos saltator]
Length = 168
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSG 115
CT+C +NF+Q+ CGHVFH C+S W++ SNSCP CR
Sbjct: 5 CTICRDNFIQSDDIAVTRCGHVFHVNCLSRWLTRSNSCPECREK 48
>gi|357454219|ref|XP_003597390.1| RING finger protein [Medicago truncatula]
gi|87241270|gb|ABD33128.1| Zinc finger, RING-type; Thioredoxin-related [Medicago truncatula]
gi|355486438|gb|AES67641.1| RING finger protein [Medicago truncatula]
gi|388498558|gb|AFK37345.1| unknown [Medicago truncatula]
Length = 355
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAAT------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV T E C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 166 SKAAIESIPTVEITDSEMESEIHCAVCKEQFELGSEARKMPCNHLYHSDCILPWLSMRNS 225
Query: 109 CPVCR 113
CPVCR
Sbjct: 226 CPVCR 230
>gi|242095466|ref|XP_002438223.1| hypothetical protein SORBIDRAFT_10g009860 [Sorghum bicolor]
gi|241916446|gb|EER89590.1| hypothetical protein SORBIDRAFT_10g009860 [Sorghum bicolor]
Length = 168
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 34 TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTV---------AATEGRCTVCMENFLQAFP 84
+T QDQ + DG L+ L T+ G C VC+E F
Sbjct: 39 RDTGQHANHQDQERVEDGHGRRGLSPGELVTLPCHDFKAADGEAAGDCAVCLEAFQAGDR 98
Query: 85 GKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
+Q+P C H FHA C+ +W+ S+ CPVCR+ V+
Sbjct: 99 CRQLPRCEHCFHAECVDSWLRKSSKCPVCRADVV 132
>gi|297796905|ref|XP_002866337.1| hypothetical protein ARALYDRAFT_496089 [Arabidopsis lyrata subsp.
lyrata]
gi|297312172|gb|EFH42596.1| hypothetical protein ARALYDRAFT_496089 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLP V +E C VC E F +++PC H+FH CI W+S+ NS
Sbjct: 176 SKSAIESLPRVEISDCHIGSEANCAVCTEIFEAETDAREMPCKHLFHDDCIVPWLSIRNS 235
Query: 109 CPVCR 113
CPVCR
Sbjct: 236 CPVCR 240
>gi|224098884|ref|XP_002311305.1| predicted protein [Populus trichocarpa]
gi|222851125|gb|EEE88672.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE--- 69
+ G +I+ + +L+ L I N + PP S+ ++ ++P+V E
Sbjct: 64 LTQGMVVIEGAASLESLLRDIGNKNGQPP------------ASKASIEAMPSVEIGEDNK 111
Query: 70 -GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
G C +C+E + K++PC H FH C+ W+ + +CPVCR
Sbjct: 112 DGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCR 156
>gi|449464310|ref|XP_004149872.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449523694|ref|XP_004168858.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 299
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + L T+ TE +C VC+++F + KQ+PC HVFH
Sbjct: 159 ENDPNRYGTPPASKSAIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFH 218
Query: 96 ATCISTWISLSNSCPVCR 113
C+ W+ L NSCP+CR
Sbjct: 219 DYCLLPWLELHNSCPICR 236
>gi|126313594|ref|XP_001363614.1| PREDICTED: e3 ubiquitin-protein ligase RNF115-like [Monodelphis
domestica]
Length = 303
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E+++
Sbjct: 190 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYVV 236
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 237 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 271
>gi|46805440|dbj|BAD16922.1| zinc finger -like [Oryza sativa Japonica Group]
gi|46806079|dbj|BAD17327.1| zinc finger -like [Oryza sativa Japonica Group]
Length = 340
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 58 TVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ SLPTV T +C VC E+F +Q+PC HV+H+ CI W+ L NSCPV
Sbjct: 179 AIDSLPTVQITGAHLSDGSQCPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPV 238
Query: 112 CRSGVIA 118
CR +++
Sbjct: 239 CRYQLLS 245
>gi|356550291|ref|XP_003543521.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 314
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV TE C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 130 SKAAIESMPTVEITESHVASETICAVCKEAFELGALAREMPCKHLYHSDCILPWLSMRNS 189
Query: 109 CPVCR 113
CPVCR
Sbjct: 190 CPVCR 194
>gi|357141010|ref|XP_003572043.1| PREDICTED: RING-H2 finger protein ATL28-like [Brachypodium
distachyon]
Length = 217
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 60 SSLPTV----AATEGR---CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPV 111
+SLP V A T+G+ C VC+E F K VP CGHVFHA CI W+ + NSCPV
Sbjct: 94 ASLPVVPYAGATTKGQERDCPVCLEEFGDDDGVKVVPACGHVFHAACIDRWLGVRNSCPV 153
Query: 112 CRSGVI 117
CR V+
Sbjct: 154 CRCAVV 159
>gi|413939079|gb|AFW73630.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 321
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV T +C VC E+F +Q+PC HV+H+ CI W+ L NSCPVC
Sbjct: 173 IDSLPTVRITGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVC 232
Query: 113 R 113
R
Sbjct: 233 R 233
>gi|296086208|emb|CBI31649.3| unnamed protein product [Vitis vinifera]
Length = 761
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAA------TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + ++PT+ TE C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 138 SKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNS 197
Query: 109 CPVCR 113
CPVCR
Sbjct: 198 CPVCR 202
>gi|431896576|gb|ELK05988.1| RING finger protein 115 [Pteropus alecto]
Length = 305
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C+VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECSVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CP+CR +
Sbjct: 239 GEEVRQLPCNHFFHSSCIVPWLELHDTCPICRKSL 273
>gi|387019683|gb|AFJ51959.1| e3 ubiquitin-protein ligase RNF115-like [Crotalus adamanteus]
Length = 302
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV T+ + C VC E++ A +Q+PC H FH++CI W+ L ++CPVC
Sbjct: 207 ISSLPTVTVTQEQVDTGLECPVCKEDYTVAEQVRQLPCNHYFHSSCIVPWLELHDTCPVC 266
Query: 113 RSGV 116
R +
Sbjct: 267 RKSL 270
>gi|242079425|ref|XP_002444481.1| hypothetical protein SORBIDRAFT_07g022610 [Sorghum bicolor]
gi|241940831|gb|EES13976.1| hypothetical protein SORBIDRAFT_07g022610 [Sorghum bicolor]
Length = 168
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 46 PKSHDGQTNS----ELTVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCI 99
P+ G S ++++LPTV E C +C ++ A +++PC H++H+ CI
Sbjct: 30 PRRRRGGAGSPPATAASIAALPTVEVAEPAAVCAICKDDLPLASEARKLPCAHLYHSLCI 89
Query: 100 STWISLSNSCPVCR 113
TW+ + NSCPVCR
Sbjct: 90 VTWLQMHNSCPVCR 103
>gi|116778816|gb|ABK21010.1| unknown [Picea sitchensis]
gi|148908581|gb|ABR17400.1| unknown [Picea sitchensis]
Length = 325
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S V ++P V +E +C VC+E F +Q+PC H+FH+ CI W+ L +
Sbjct: 168 SRSAVEAMPAVEISESHLSSDVSQCAVCLEEFELGSEARQMPCKHMFHSDCIQPWLKLHS 227
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 228 SCPVCR 233
>gi|14719329|gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 47 KSHDGQTNSELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIS 100
++ + S+ +V S+PTV + C VC E F +++PC H++H CI
Sbjct: 165 RARENPPASKASVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCIL 224
Query: 101 TWISLSNSCPVCR 113
W++L NSCPVCR
Sbjct: 225 PWLALRNSCPVCR 237
>gi|242063190|ref|XP_002452884.1| hypothetical protein SORBIDRAFT_04g034270 [Sorghum bicolor]
gi|241932715|gb|EES05860.1| hypothetical protein SORBIDRAFT_04g034270 [Sorghum bicolor]
Length = 318
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV T +C VC E+F +Q+PC HV+H+ CI W+ L NSCPVC
Sbjct: 171 IDSLPTVRITGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVC 230
Query: 113 R 113
R
Sbjct: 231 R 231
>gi|242082754|ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [Sorghum bicolor]
gi|241942495|gb|EES15640.1| hypothetical protein SORBIDRAFT_08g002550 [Sorghum bicolor]
Length = 208
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++ +LPTV +E C +C ++ A +++PCGH++H++CI W+ + NSCP+CR
Sbjct: 97 SIEALPTVEVSEPGAVCAICKDDLPLAAAARRLPCGHLYHSSCIVPWLEVHNSCPICR 154
>gi|225435816|ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
vinifera]
gi|225435818|ref|XP_002285766.1| PREDICTED: uncharacterized protein LOC100250148 isoform 2 [Vitis
vinifera]
Length = 368
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + ++PTV E +C+VC+++F +++PC H
Sbjct: 214 NRYGTPPAQKD------------AIEAMPTVKIKENLQCSVCLDDFEIGAEAREMPCKHK 261
Query: 94 FHATCISTWISLSNSCPVCRSGVIA 118
FH+ CI W+ L +SCPVCR + A
Sbjct: 262 FHSGCILPWLELHSSCPVCRFQIAA 286
>gi|328869988|gb|EGG18363.1| hypothetical protein DFA_03857 [Dictyostelium fasciculatum]
Length = 648
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 53 TNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
TN ++ +A T+ C VC E+ GK++PCGH+ H +C+ +W+ SCP+C
Sbjct: 240 TNERFADATEQELANTDRICIVCREDMTH---GKKLPCGHILHLSCLRSWLERQQSCPIC 296
Query: 113 RSGVIA 118
R+ V+A
Sbjct: 297 RADVLA 302
>gi|348526878|ref|XP_003450946.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Oreochromis
niloticus]
Length = 315
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P ++++ +SSLPTV ++ + C VC E+F
Sbjct: 206 QLLGQLENTGPPPAEKEK-------------ISSLPTVNISQEQADCCMECPVCKEDFRV 252
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
P +Q+PC H FH+ CI W+ + ++CPVCR +
Sbjct: 253 GEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSL 287
>gi|356542365|ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 361
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV T+ C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 159 SKAAIESMPTVEIGETHVETDAHCAVCKEVFELHAEARELPCKHIYHSECILPWLSMRNS 218
Query: 109 CPVCR 113
CPVCR
Sbjct: 219 CPVCR 223
>gi|291398109|ref|XP_002715695.1| PREDICTED: Rabring 7 [Oryctolagus cuniculus]
Length = 305
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV+ T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVSVTQEQVDMGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 REEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|224090757|ref|XP_002309072.1| predicted protein [Populus trichocarpa]
gi|222855048|gb|EEE92595.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 19 IIDESFN--LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCM 76
++D F LD+ M N D P++ S + L + + E +C VC
Sbjct: 106 LMDSGFERLLDQLTQMEINGVGR---FDHPQASKAAIESMPVIKILNSHVSMESQCAVCK 162
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E F +++PC H++H+ CI W+S+ NSCPVCR
Sbjct: 163 EAFEINTEAREMPCNHIYHSDCILPWLSIRNSCPVCR 199
>gi|167520091|ref|XP_001744385.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777471|gb|EDQ91088.1| predicted protein [Monosiga brevicollis MX1]
Length = 634
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ P A++ CT+C E+ GK++PCGH+FH C+ +W+ + SCP CR+ ++A
Sbjct: 278 NATPEELASDNLCTICREDMDV---GKKLPCGHIFHLNCLRSWLQQNQSCPTCRADILA 333
>gi|297746512|emb|CBI16568.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + ++PTV E +C+VC+++F +++PC H
Sbjct: 168 NRYGTPPAQKD------------AIEAMPTVKIKENLQCSVCLDDFEIGAEAREMPCKHK 215
Query: 94 FHATCISTWISLSNSCPVCRSGVIA 118
FH+ CI W+ L +SCPVCR + A
Sbjct: 216 FHSGCILPWLELHSSCPVCRFQIAA 240
>gi|297603684|ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
gi|52353630|gb|AAU44196.1| putative ring-H2 finger protein [Oryza sativa Japonica Group]
gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa Japonica Group]
Length = 333
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ +V S+PTV + C VC E F +++PC H++H CI W++L NS
Sbjct: 120 SKASVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNS 179
Query: 109 CPVCR 113
CPVCR
Sbjct: 180 CPVCR 184
>gi|119591844|gb|EAW71438.1| zinc finger protein 364, isoform CRA_b [Homo sapiens]
Length = 223
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 110 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 156
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 157 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 191
>gi|344238651|gb|EGV94754.1| RING finger protein 115 [Cricetulus griseus]
Length = 224
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 111 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYTV 157
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 158 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 192
>gi|224052857|ref|XP_002297615.1| predicted protein [Populus trichocarpa]
gi|222844873|gb|EEE82420.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E +C+VC+++F +++PC H FH+ CI W+ L +SCPVCR
Sbjct: 212 AVEALPTVIIKEPLQCSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCR 268
>gi|410171287|ref|XP_003960214.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like isoform 2 [Homo
sapiens]
Length = 271
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 158 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 204
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 205 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 239
>gi|357134972|ref|XP_003569088.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 415
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 50 DGQTNSELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI 103
D S+ V S+P V + C VC E F +++PCGH++H CI W+
Sbjct: 191 DNPPASKAAVESMPVVVVAACHVGADSHCAVCKEPFELGAEAREMPCGHMYHQDCILPWL 250
Query: 104 SLSNSCPVCR 113
+L NSCPVCR
Sbjct: 251 ALRNSCPVCR 260
>gi|281353326|gb|EFB28910.1| hypothetical protein PANDA_013977 [Ailuropoda melanoleuca]
Length = 232
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 119 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 165
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 166 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 200
>gi|5102894|emb|CAB45280.1| hypothetical protein, similar to (U06944) PRAJA1 [Mus musculus]
[Homo sapiens]
Length = 232
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 119 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 165
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 166 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 200
>gi|224112257|ref|XP_002316133.1| predicted protein [Populus trichocarpa]
gi|118483434|gb|ABK93617.1| unknown [Populus trichocarpa]
gi|222865173|gb|EEF02304.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE--- 69
G +I+ + +L+ L I N PP S+ ++ ++P V E
Sbjct: 65 FTQGMVVIEGAASLESLLRDIGNKKGQPP------------ASKASIEAMPKVEIGEDNK 112
Query: 70 -GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
G C +C+E + K++PC H FH C+ W+ + +CPVCR
Sbjct: 113 DGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKIHGNCPVCR 157
>gi|403307926|ref|XP_003944433.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Saimiri boliviensis
boliviensis]
Length = 271
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 158 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYTV 204
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 205 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 239
>gi|354473007|ref|XP_003498728.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cricetulus
griseus]
Length = 360
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 247 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYTV 293
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 294 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 328
>gi|156063572|ref|XP_001597708.1| hypothetical protein SS1G_01904 [Sclerotinia sclerotiorum 1980]
gi|154697238|gb|EDN96976.1| hypothetical protein SS1G_01904 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 624
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 59 VSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+S+LP A E G C+VCM++ A +PC H FH C S W+S NSCP
Sbjct: 358 ISALPKKALDEKMLGPEGRGECSVCMDDVFLATEVVVLPCKHWFHEACASAWLSEHNSCP 417
Query: 111 VCRSGVIA 118
+CR G+ A
Sbjct: 418 ICRKGIEA 425
>gi|74204571|dbj|BAE35358.1| unnamed protein product [Mus musculus]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVNTGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|395842052|ref|XP_003793834.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Otolemur garnettii]
Length = 306
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 193 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 239
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 240 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 274
>gi|218186416|gb|EEC68843.1| hypothetical protein OsI_37428 [Oryza sativa Indica Group]
Length = 197
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
A E C VC+E+F +++PC H FHATCI W+ LS+ CP+CR
Sbjct: 141 ARERGCAVCLEDFEAGEKLRRMPCSHCFHATCILDWLRLSHRCPLCR 187
>gi|256080072|ref|XP_002576307.1| zinc finger protein [Schistosoma mansoni]
gi|350646030|emb|CCD59307.1| zinc finger protein, putative [Schistosoma mansoni]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E ++ LPT++ TE G C++C ++F ++ ++PC H +H TC++TW+ +C
Sbjct: 129 ESAIADLPTISLTEEQALKLGICSICFDDFKESESVIRLPCAHTYHQTCVTTWLKQHGTC 188
Query: 110 PVCRSGV 116
PVCR +
Sbjct: 189 PVCRKDL 195
>gi|224083886|ref|XP_002307159.1| predicted protein [Populus trichocarpa]
gi|222856608|gb|EEE94155.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVF 94
++ P + S+ + +LPT+ TE +C VC + F K +PC HVF
Sbjct: 158 ENDPNRYGTPPASKTAIEALPTMKVTEEMMKSEMNNQCAVCKDEFESGEEVKGMPCKHVF 217
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+ + NSCPVCR
Sbjct: 218 HEDCIMPWLKMHNSCPVCR 236
>gi|357158543|ref|XP_003578161.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Brachypodium
distachyon]
Length = 327
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 12 NIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG- 70
N +SG ++ + L+E+L IT PP S+ V++LP V TE
Sbjct: 192 NTISGDRDLETA--LEESLQGITAHPKVPP------------ASKEVVANLPVVTVTEEV 237
Query: 71 --------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C VC EN + +++PC H+FH C+ W+ +NSCP+CR
Sbjct: 238 IARLGSETQCAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDENNSCPICR 288
>gi|402855935|ref|XP_003892564.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Papio anubis]
Length = 223
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 110 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 156
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 157 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 191
>gi|345782541|ref|XP_850302.2| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Canis lupus
familiaris]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|349604814|gb|AEQ00261.1| RING finger protein 115-like protein, partial [Equus caballus]
Length = 113
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 19/93 (20%)
Query: 30 LTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQAF 83
L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 2 LGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTVEE 48
Query: 84 PGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 49 EVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 81
>gi|395535851|ref|XP_003769934.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Sarcophilus
harrisii]
Length = 278
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 165 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYTV 211
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 212 EEQVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 246
>gi|410968180|ref|XP_003990587.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Felis catus]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|242079423|ref|XP_002444480.1| hypothetical protein SORBIDRAFT_07g022600 [Sorghum bicolor]
gi|241940830|gb|EES13975.1| hypothetical protein SORBIDRAFT_07g022600 [Sorghum bicolor]
Length = 321
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++++LPTV E C +C ++ A +++PC H++H+ CI TW+ + NSCPVCR
Sbjct: 166 SIAALPTVEVAEPAAVCAICKDDLPLASEARKLPCAHLYHSFCIVTWLQMHNSCPVCR 223
>gi|170172564|ref|NP_080682.3| E3 ubiquitin-protein ligase RNF115 [Mus musculus]
gi|28380241|sp|Q9D0C1.1|RN115_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF115; AltName:
Full=RING finger protein 115; AltName: Full=Rabring 7;
AltName: Full=Zinc finger protein 364
gi|12847805|dbj|BAB27716.1| unnamed protein product [Mus musculus]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVNTGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|332237884|ref|XP_003268137.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115
[Nomascus leucogenys]
Length = 304
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|115473525|ref|NP_001060361.1| Os07g0631200 [Oryza sativa Japonica Group]
gi|22296366|dbj|BAC10135.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113611897|dbj|BAF22275.1| Os07g0631200 [Oryza sativa Japonica Group]
gi|125538788|gb|EAY85183.1| hypothetical protein OsI_06541 [Oryza sativa Indica Group]
gi|125601185|gb|EAZ40761.1| hypothetical protein OsJ_25234 [Oryza sativa Japonica Group]
gi|215767711|dbj|BAG99939.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 55 SELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++SL V A E G C +C++ F GK++PCGH FH+ C+ W+ +
Sbjct: 64 SKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAA---GKEMPCGHRFHSECLERWLGVH 120
Query: 107 NSCPVCR 113
SCPVCR
Sbjct: 121 GSCPVCR 127
>gi|18605646|gb|AAH23113.1| Ring finger protein 115 [Mus musculus]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVNTGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EGKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|114558417|ref|XP_514416.2| PREDICTED: E3 ubiquitin-protein ligase RNF115 isoform 2 [Pan
troglodytes]
Length = 304
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|344306661|ref|XP_003422004.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Loxodonta
africana]
Length = 301
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 188 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKEDYTV 234
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 235 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 269
>gi|426216417|ref|XP_004002459.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Ovis aries]
Length = 293
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 180 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDKGLECPVCKEDYTV 226
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 227 EEEVRQLPCNHYFHSSCIVPWLELHDACPVCRKSL 261
>gi|397469201|ref|XP_003806250.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Pan paniscus]
gi|410213042|gb|JAA03740.1| ring finger protein 115 [Pan troglodytes]
gi|410260140|gb|JAA18036.1| ring finger protein 115 [Pan troglodytes]
gi|410294980|gb|JAA26090.1| ring finger protein 115 [Pan troglodytes]
gi|410335613|gb|JAA36753.1| ring finger protein 115 [Pan troglodytes]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|326513594|dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 50 DGQTNSELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI 103
D S+ V S+PTV + C VC E F +++PC H++H CI W+
Sbjct: 170 DNPPASKAAVESMPTVVVAACHVGADSHCAVCKEAFELGDEAREMPCSHMYHQDCILPWL 229
Query: 104 SLSNSCPVCR 113
+L NSCPVCR
Sbjct: 230 ALRNSCPVCR 239
>gi|12842450|dbj|BAB25607.1| unnamed protein product [Mus musculus]
Length = 305
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVNTGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 239 EEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>gi|222629933|gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japonica Group]
Length = 243
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ +V S+PTV + C VC E F +++PC H++H CI W++L NS
Sbjct: 30 SKASVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNS 89
Query: 109 CPVCR 113
CPVCR
Sbjct: 90 CPVCR 94
>gi|355716740|gb|AES05707.1| ring finger protein 115 [Mustela putorius furo]
Length = 319
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 207 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 253
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 254 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 288
>gi|297663836|ref|XP_002810371.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Pongo abelii]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|426331112|ref|XP_004026539.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Gorilla gorilla
gorilla]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|388501556|gb|AFK38844.1| unknown [Lotus japonicus]
Length = 232
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 55 SELTVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
S+ ++ ++P+V EG C VC+E F K++PC H FH CI W+ + SC
Sbjct: 97 SKESIDAMPSVEVGEGDDDDGECVVCLEGFEVGKVVKEMPCKHRFHPDCIEKWLGIHGSC 156
Query: 110 PVCR 113
PVCR
Sbjct: 157 PVCR 160
>gi|118489087|gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 225
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 13 IVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE--- 69
+ G +I+ + +L+ L + N + PP S+ ++ ++P+V E
Sbjct: 64 LTQGMVVIEGAASLESLLRDMGNKNGQPP------------ASKASIEAMPSVEIGEDNK 111
Query: 70 -GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
G C +C+E + K++PC H FH C+ W+ + +CPVCR
Sbjct: 112 DGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCR 156
>gi|115495109|ref|NP_001069776.1| E3 ubiquitin-protein ligase RNF115 [Bos taurus]
gi|92096918|gb|AAI14854.1| Ring finger protein 115 [Bos taurus]
gi|296489499|tpg|DAA31612.1| TPA: Rabring 7 [Bos taurus]
gi|440903798|gb|ELR54405.1| E3 ubiquitin-protein ligase RNF115 [Bos grunniens mutus]
Length = 293
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 180 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDKGLECPVCKEDYTV 226
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 227 EEEVRQLPCNHYFHSSCIVPWLELHDACPVCRKSL 261
>gi|33859668|ref|NP_055270.1| E3 ubiquitin-protein ligase RNF115 [Homo sapiens]
gi|410171285|ref|XP_003960213.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like isoform 1 [Homo
sapiens]
gi|56405389|sp|Q9Y4L5.2|RN115_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF115; AltName:
Full=RING finger protein 115; AltName: Full=Rabring 7;
AltName: Full=Zinc finger protein 364
gi|33150828|gb|AAP97292.1|AF419857_1 hypothetical protein [Homo sapiens]
gi|32450454|gb|AAH54049.1| Ring finger protein 115 [Homo sapiens]
gi|33328184|gb|AAQ09535.1| zinc finger protein 364 [Homo sapiens]
gi|40787658|gb|AAH64903.1| Ring finger protein 115 [Homo sapiens]
gi|55959481|emb|CAI13717.1| ring finger protein 115 [Homo sapiens]
gi|119591843|gb|EAW71437.1| zinc finger protein 364, isoform CRA_a [Homo sapiens]
gi|158254934|dbj|BAF83438.1| unnamed protein product [Homo sapiens]
gi|167773443|gb|ABZ92156.1| zinc finger protein 364 [synthetic construct]
gi|167773771|gb|ABZ92320.1| zinc finger protein 364 [synthetic construct]
gi|254071415|gb|ACT64467.1| zinc finger protein 364 protein [synthetic construct]
gi|254071417|gb|ACT64468.1| zinc finger protein 364 protein [synthetic construct]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|224101017|ref|XP_002312107.1| predicted protein [Populus trichocarpa]
gi|222851927|gb|EEE89474.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAA------TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV TE C VC E F +++PC H++H CI W+S+ NS
Sbjct: 176 SKSAIESMPTVIVNESHIFTESHCAVCKEAFELESEAREMPCKHIYHTDCILPWLSIRNS 235
Query: 109 CPVCR 113
CPVCR
Sbjct: 236 CPVCR 240
>gi|388452874|ref|NP_001253713.1| ring finger protein 115 [Macaca mulatta]
gi|355558344|gb|EHH15124.1| hypothetical protein EGK_01173 [Macaca mulatta]
gi|355745607|gb|EHH50232.1| hypothetical protein EGM_01025 [Macaca fascicularis]
gi|380786309|gb|AFE65030.1| E3 ubiquitin-protein ligase RNF115 [Macaca mulatta]
gi|383413261|gb|AFH29844.1| E3 ubiquitin-protein ligase RNF115 [Macaca mulatta]
gi|384946480|gb|AFI36845.1| E3 ubiquitin-protein ligase RNF115 [Macaca mulatta]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 191 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 238 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|301778373|ref|XP_002924616.1| PREDICTED: RING finger protein 115-like [Ailuropoda melanoleuca]
Length = 326
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 213 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDMGLECPVCKEDYTV 259
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 260 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 294
>gi|50511360|gb|AAT77283.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768611|dbj|BAH00840.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632044|gb|EEE64176.1| hypothetical protein OsJ_19008 [Oryza sativa Japonica Group]
Length = 323
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH++CI W+ L +SCPVCR
Sbjct: 185 VEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCR 240
>gi|307190127|gb|EFN74281.1| RING finger protein 115 [Camponotus floridanus]
Length = 340
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +PT A ++ + C+VC E+F + P +Q+PC HV+HA CI W+ L +CP+C
Sbjct: 221 IDEIPTTAISQSQVDCKLQCSVCWEDFKLSEPVRQLPCQHVYHAPCIIPWLELHGTCPIC 280
Query: 113 RSGV 116
R +
Sbjct: 281 RQSL 284
>gi|170058981|ref|XP_001865162.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877857|gb|EDS41240.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 234
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A+ EG C +CM++ + K +PCGH FH CI W+ +NSCPVCR+ V
Sbjct: 178 ASHEGDCAICMDDVALSASRKFLPCGHAFHGHCIGRWLRSNNSCPVCRAEV 228
>gi|332028754|gb|EGI68785.1| RING finger protein 126-B [Acromyrmex echinatior]
Length = 335
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S + +PT T+ + C+VC E+F + P +Q+PC HV+HA CI W+ L +
Sbjct: 212 SRNQIDEIPTTTITQSQVDCKLQCSVCWEDFKLSEPVRQLPCQHVYHAPCIVPWLELHGT 271
Query: 109 CPVCRSGV 116
CP+CR +
Sbjct: 272 CPICRQNL 279
>gi|449450754|ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449527992|ref|XP_004170991.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 378
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PT+ E C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 162 SKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNS 221
Query: 109 CPVCR 113
CPVCR
Sbjct: 222 CPVCR 226
>gi|125552791|gb|EAY98500.1| hypothetical protein OsI_20412 [Oryza sativa Indica Group]
Length = 323
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH++CI W+ L +SCPVCR
Sbjct: 185 VEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCR 240
>gi|222635178|gb|EEE65310.1| hypothetical protein OsJ_20551 [Oryza sativa Japonica Group]
Length = 1054
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 56 ELTVSSLPTV--------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
E + SLPTV A C VC E F +++PC H +H+ CI W+ L N
Sbjct: 164 ESAIESLPTVHISPDHLPADGGSECPVCKEEFELGEAARELPCKHAYHSDCIVPWLRLHN 223
Query: 108 SCPVCRSGV 116
SCPVCR V
Sbjct: 224 SCPVCRQEV 232
>gi|410905641|ref|XP_003966300.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Takifugu
rubripes]
Length = 311
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P ++++ +SSLPTV ++ + C VC E+F
Sbjct: 202 QLLGQLENTGPPPAEKEK-------------ISSLPTVNISQEQADCCMECPVCKEDFSV 248
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
P +Q+PC H FH+ CI W+ + ++CPVCR +
Sbjct: 249 GEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSL 283
>gi|297604679|ref|NP_001055887.2| Os05g0488800 [Oryza sativa Japonica Group]
gi|255676455|dbj|BAF17801.2| Os05g0488800, partial [Oryza sativa Japonica Group]
Length = 323
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH++CI W+ L +SCPVCR
Sbjct: 185 VEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCR 240
>gi|255638884|gb|ACU19744.1| unknown [Glycine max]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 33 ITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT------EGRCTVCMENFLQAFPGK 86
I+N PP P SH ++ ++PT+ T + C VC E F +
Sbjct: 121 ISNDRLGPP----PASHS-------SIDAMPTIKITHEHLQSDSHCPVCKERFELGSEAR 169
Query: 87 QVPCGHVFHATCISTWISLSNSCPVCR 113
++PC HV+H+ CI W+ L NSCPVCR
Sbjct: 170 KMPCNHVYHSDCIVPWLVLHNSCPVCR 196
>gi|413924407|gb|AFW64339.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 323
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV +C VC E+F +Q+PC HV+H+ CI W+ L NSCPVC
Sbjct: 173 IDSLPTVRVAGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVC 232
Query: 113 R 113
R
Sbjct: 233 R 233
>gi|350646031|emb|CCD59308.1| zinc finger protein, putative [Schistosoma mansoni]
Length = 276
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E ++ LPT++ TE G C++C ++F ++ ++PC H +H TC++TW+ +C
Sbjct: 183 ESAIADLPTISLTEEQALKLGICSICFDDFKESESVIRLPCAHTYHQTCVTTWLKQHGTC 242
Query: 110 PVCRSGV 116
PVCR +
Sbjct: 243 PVCRKDL 249
>gi|224096522|ref|XP_002310643.1| predicted protein [Populus trichocarpa]
gi|222853546|gb|EEE91093.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVF 94
++ P + S+ + +LPT+ TE +C VC + F K +PC HVF
Sbjct: 7 ENDPNRYGTPPASKKAIEALPTMKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHVF 66
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+++ NSCPVCR
Sbjct: 67 HEDCIIPWLNMHNSCPVCR 85
>gi|212275552|ref|NP_001130065.1| uncharacterized protein LOC100191157 [Zea mays]
gi|195621086|gb|ACG32373.1| RHC1A [Zea mays]
Length = 333
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH+ CI W+ L +SCPVCR
Sbjct: 195 VDALPTVQIAEAVSCSVCLDDLELGSQAKQMPCEHKFHSPCILPWLELHSSCPVCR 250
>gi|194688204|gb|ACF78186.1| unknown [Zea mays]
gi|413945797|gb|AFW78446.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 333
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH+ CI W+ L +SCPVCR
Sbjct: 195 VDALPTVQIAEAVSCSVCLDDLELGSQAKQMPCEHKFHSPCILPWLELHSSCPVCR 250
>gi|428173577|gb|EKX42478.1| hypothetical protein GUITHDRAFT_153536 [Guillardia theta CCMP2712]
Length = 277
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 50 DGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+GQT+ + + PT C++C+ NF + +PC HVFH CI W+S+S C
Sbjct: 121 EGQTDGQDEEDNRPT-------CSICLGNFFTGEDCRMLPCLHVFHKNCIDQWLSMSQEC 173
Query: 110 PVCRSGVIA 118
P+C+ VI+
Sbjct: 174 PLCKRSVIS 182
>gi|18396059|ref|NP_564263.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9295734|gb|AAF87040.1|AC006535_18 T24P13.19 [Arabidopsis thaliana]
gi|13605625|gb|AAK32806.1|AF361638_1 At1g26800/T24P13_21 [Arabidopsis thaliana]
gi|15450675|gb|AAK96609.1| At1g26800/T24P13_21 [Arabidopsis thaliana]
gi|15777873|gb|AAL05897.1| At1g26800/T24P13_21 [Arabidopsis thaliana]
gi|332192622|gb|AEE30743.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 204
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLPTVA--ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ ++ ++P V EG C +C+E + K++PC H FH CI W+ SCPVC
Sbjct: 94 SKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVC 153
Query: 113 R 113
R
Sbjct: 154 R 154
>gi|47207523|emb|CAG14089.1| unnamed protein product [Tetraodon nigroviridis]
Length = 189
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P ++++ +SSLPTV ++ + C VC E+F
Sbjct: 80 QLLGQLENTGPPPAEKEK-------------ISSLPTVNISQEQADCCMECPVCKEDFSV 126
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
P +Q+PC H FH+ CI W+ + ++CPVCR +
Sbjct: 127 GEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSL 161
>gi|256080070|ref|XP_002576306.1| zinc finger protein [Schistosoma mansoni]
gi|350646032|emb|CCD59309.1| zinc finger protein, putative [Schistosoma mansoni]
Length = 275
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E ++ LPT++ TE G C++C ++F ++ ++PC H +H TC++TW+ +C
Sbjct: 182 ESAIADLPTISLTEEQALKLGICSICFDDFKESESVIRLPCAHTYHQTCVTTWLKQHGTC 241
Query: 110 PVCRSGV 116
PVCR +
Sbjct: 242 PVCRKDL 248
>gi|74203511|dbj|BAE20909.1| unnamed protein product [Mus musculus]
Length = 305
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 192 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVNTGLECPVCKEDYTV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH+ CI W+ L ++CPVCR +
Sbjct: 239 EEKVRQLPCNHFFHSRCIVPWLELHDTCPVCRKSL 273
>gi|414869819|tpg|DAA48376.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 295
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++++LPTV E C +C ++ A +++PC H++H+ CI TW+ + NSCPVCR
Sbjct: 139 SIAALPTVEVAEPTAVCAICKDDLPLASEARKLPCAHLYHSFCIVTWLGMHNSCPVCR 196
>gi|297845520|ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297336483|gb|EFH66900.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLPTVA--ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ ++ ++P V EG C +C+E + K++PC H FH CI W+ SCPVC
Sbjct: 94 SKASIDAMPIVQIDGYEGECVICLEEWKSDEMVKEMPCKHRFHGGCIEKWLGFHGSCPVC 153
Query: 113 R 113
R
Sbjct: 154 R 154
>gi|21554312|gb|AAM63417.1| unknown [Arabidopsis thaliana]
Length = 204
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLPTVA--ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ ++ ++P V EG C +C+E + K++PC H FH CI W+ SCPVC
Sbjct: 94 SKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVC 153
Query: 113 R 113
R
Sbjct: 154 R 154
>gi|118489091|gb|ABK96352.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 296
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVF 94
++ P + S+ + +LPT+ TE +C VC + F K +PC HVF
Sbjct: 167 ENDPNRYGTPPASKKAIEALPTMKVTEEMMKSEMNNQCAVCKDEFEGGEEVKGMPCKHVF 226
Query: 95 HATCISTWISLSNSCPVCR 113
H CI W+++ NSCPVCR
Sbjct: 227 HEDCIIPWLNMHNSCPVCR 245
>gi|47192552|emb|CAG14084.1| unnamed protein product [Tetraodon nigroviridis]
Length = 109
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV ++ + C VC E+F P +Q+PC H FH+ CI W+ + ++CPVC
Sbjct: 18 ISSLPTVNISQEQADCCMECPVCKEDFSVCEPVRQLPCNHFFHSDCIVPWLEMHDTCPVC 77
Query: 113 RSGV 116
R +
Sbjct: 78 RKSL 81
>gi|213982907|ref|NP_001135621.1| ring finger protein 115 [Xenopus (Silurana) tropicalis]
gi|197245762|gb|AAI68458.1| Unknown (protein for MGC:147905) [Xenopus (Silurana) tropicalis]
Length = 295
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+D+ + SLPTV T + C VC E++
Sbjct: 184 QLLGQLENTGPPPADKDK-------------IVSLPTVTVTREQVAMGLECPVCKEDYAI 230
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH CI W+ L ++CPVCR +
Sbjct: 231 EEQVRQLPCNHFFHGDCIVPWLELHDTCPVCRKSL 265
>gi|350583447|ref|XP_001925867.3| PREDICTED: E3 ubiquitin-protein ligase RNF115-like, partial [Sus
scrofa]
Length = 259
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 146 QLLGQLENTGPPPADKEK-------------ITSLPTVTITQEQVDKGLECPVCKEDYTV 192
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 193 EEEVRQLPCNHFFHSSCIVPWLELHDACPVCRKSL 227
>gi|8885559|dbj|BAA97489.1| unnamed protein product [Arabidopsis thaliana]
Length = 512
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLP V +E C VC E F +++PC H+FH CI W+S+ NS
Sbjct: 281 SKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNS 340
Query: 109 CPVCR 113
CPVCR
Sbjct: 341 CPVCR 345
>gi|18424254|ref|NP_568910.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|15450687|gb|AAK96615.1| AT5g59550/f2o15_210 [Arabidopsis thaliana]
gi|17380612|gb|AAL36069.1| AT5g59550/f2o15_210 [Arabidopsis thaliana]
gi|110735082|gb|ABG89111.1| ubiquitin-interacting factor 1b [synthetic construct]
gi|332009821|gb|AED97204.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 407
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLP V +E C VC E F +++PC H+FH CI W+S+ NS
Sbjct: 176 SKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNS 235
Query: 109 CPVCR 113
CPVCR
Sbjct: 236 CPVCR 240
>gi|255564802|ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein, putative [Ricinus communis]
Length = 394
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHV 93
N TPP Q + + +LPTV +C+VC+++F K++PC H
Sbjct: 215 NRYGTPPAQKE------------AIEALPTVTIKNTSQCSVCLDDFEIGTEAKEMPCKHR 262
Query: 94 FHATCISTWISLSNSCPVCR 113
FH CI W+ L +SCPVCR
Sbjct: 263 FHDVCILPWLELHSSCPVCR 282
>gi|383168477|gb|AFG67327.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168482|gb|AFG67332.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168485|gb|AFG67335.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
Length = 132
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATE----GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S +V +L V A+ G+C VC + F K++PC HV+HA CI W++ NSCP
Sbjct: 57 SRASVDALEEVKASGKDAVGQCAVCKDEFELGKYAKRMPCNHVYHADCILPWLARHNSCP 116
Query: 111 VCR 113
VCR
Sbjct: 117 VCR 119
>gi|350583443|ref|XP_003481520.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Sus scrofa]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC E++
Sbjct: 180 QLLGQLENTGPPPADKEK-------------ITSLPTVTITQEQVDKGLECPVCKEDYTV 226
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 227 EEEVRQLPCNHFFHSSCIVPWLELHDACPVCRKSL 261
>gi|26451608|dbj|BAC42901.1| unknown protein [Arabidopsis thaliana]
Length = 121
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ + +C VCM+ F KQ+PC HVFH C+ W+ L NSCPVCR
Sbjct: 2 LKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 50
>gi|356557881|ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 314
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PT+ TE C VC E F +++PC H++H+ CI W+S+ NS
Sbjct: 130 SKAAIESMPTLEITESHVASETTCAVCKEAFELGELAREMPCKHLYHSDCILPWLSMRNS 189
Query: 109 CPVCR 113
CPVCR
Sbjct: 190 CPVCR 194
>gi|313233855|emb|CBY10024.1| unnamed protein product [Oikopleura dioica]
Length = 569
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A + C +C E + K++PCGH+FHA C+ +W +CP CR V+
Sbjct: 284 ANDSTCIICREEMVAGSSSKKLPCGHIFHAACLRSWFQRQQTCPTCRLDVL 334
>gi|226507584|ref|NP_001149547.1| RHC1A [Zea mays]
gi|195627928|gb|ACG35794.1| RHC1A [Zea mays]
Length = 318
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV +C VC E+F +Q+PC HV+H+ CI W+ L NSCPVC
Sbjct: 174 IDSLPTVRVAGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVC 233
Query: 113 R 113
R
Sbjct: 234 R 234
>gi|413924408|gb|AFW64340.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV +C VC E+F +Q+PC HV+H+ CI W+ L NSCPVC
Sbjct: 173 IDSLPTVRVAGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVC 232
Query: 113 R 113
R
Sbjct: 233 R 233
>gi|356549884|ref|XP_003543320.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 306
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 33 ITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT------EGRCTVCMENFLQAFPGK 86
I+N PP P SH ++ ++PT+ T + C VC E F +
Sbjct: 172 ISNDRLGPP----PASHS-------SIDAMPTIKITHEHLQSDSHCPVCKERFELGSEAR 220
Query: 87 QVPCGHVFHATCISTWISLSNSCPVCR 113
++PC HV+H+ CI W+ L NSCPVCR
Sbjct: 221 KMPCNHVYHSDCIVPWLVLHNSCPVCR 247
>gi|357499703|ref|XP_003620140.1| RING finger protein [Medicago truncatula]
gi|355495155|gb|AES76358.1| RING finger protein [Medicago truncatula]
Length = 238
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V LP + T +C VC + F KQ+PC H++H CI W+ L N
Sbjct: 75 SKSAVEKLPVIEVTGELLESDSSQCAVCKDTFALGEKAKQMPCKHIYHDDCILPWLELHN 134
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 135 SCPVCR 140
>gi|357135002|ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 410
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+PTV + + C VC E F +++PC H++H CI W+ L NS
Sbjct: 196 SKAAVESMPTVTIAASHVSADCHCAVCKEPFEFGAEAREMPCAHIYHPDCILPWLQLRNS 255
Query: 109 CPVCR 113
CPVCR
Sbjct: 256 CPVCR 260
>gi|401395564|ref|XP_003879629.1| hypothetical protein NCLIV_000880 [Neospora caninum Liverpool]
gi|325114036|emb|CBZ49594.1| hypothetical protein NCLIV_000880 [Neospora caninum Liverpool]
Length = 569
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 52 QTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ + LT P V G C +C+E+F+ +++PCGHVFH TCI +W S S CP+
Sbjct: 360 EGGAGLTRRKGPRV----GNCAICIEDFVPTALVRRLPCGHVFHRTCIDSWFSRSTLCPL 415
Query: 112 C 112
C
Sbjct: 416 C 416
>gi|307199729|gb|EFN80208.1| RING finger protein 126 [Harpegnathos saltator]
Length = 324
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E+F + P +Q+PC HV+HA CI W+ L +CP+CR +
Sbjct: 229 QCSVCWEDFKLSEPVRQLPCQHVYHAPCIVPWLELHGTCPICRQSL 274
>gi|125525385|gb|EAY73499.1| hypothetical protein OsI_01381 [Oryza sativa Indica Group]
Length = 329
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 58 TVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V S+PTV G C VC+E++ ++PC H FHA CI W+ + +SCPVC
Sbjct: 194 AVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVC 253
Query: 113 R 113
R
Sbjct: 254 R 254
>gi|357520869|ref|XP_003630723.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula]
gi|355524745|gb|AET05199.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula]
Length = 106
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 59 VSSLPTV--AATEGRCTVCMENFLQAF-----PGKQVPCGHVFHATCISTWISLSNSCPV 111
VSSLP V E C+VCME+F + K+VPCGHV+H+ CI+ W+ +SCP+
Sbjct: 40 VSSLPAVLDVTKEDVCSVCMESFEDSHNSEEGGNKRVPCGHVYHSNCITLWLHRCSSCPL 99
Query: 112 CRSGV 116
CR +
Sbjct: 100 CRRHI 104
>gi|115435944|ref|NP_001042730.1| Os01g0276600 [Oryza sativa Japonica Group]
gi|6539567|dbj|BAA88184.1| zinc finger protein -like [Oryza sativa Japonica Group]
gi|113532261|dbj|BAF04644.1| Os01g0276600 [Oryza sativa Japonica Group]
Length = 329
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 58 TVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V S+PTV G C VC+E++ ++PC H FHA CI W+ + +SCPVC
Sbjct: 194 AVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVC 253
Query: 113 R 113
R
Sbjct: 254 R 254
>gi|76096344|ref|NP_001028874.1| RING finger protein 126 [Rattus norvegicus]
gi|71122335|gb|AAH99810.1| Ring finger protein 126 [Rattus norvegicus]
Length = 328
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC E
Sbjct: 203 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKE 251
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH +CI W+ +SCPVCR +
Sbjct: 252 DYALGERVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 290
>gi|345321013|ref|XP_001513994.2| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Ornithorhynchus
anatinus]
Length = 154
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 59 VSSLPTVAATEG----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
V +LPT TE +C VC+ F + + +PC H+FHA CI W+ +NSCP+CR
Sbjct: 60 VQNLPTAVITEAQAGLKCPVCLLEFEEEQTARAMPCQHLFHANCILPWLGKTNSCPLCRH 119
Query: 115 GV 116
+
Sbjct: 120 EL 121
>gi|225425662|ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 233
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 16 GSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTV--AATEGRCT 73
G +I+ + + D L + + PP ++ ++ ++P+V +G C
Sbjct: 73 GMIVIEGNSSFDSLLRELASKGGQPP------------ATKASIEAMPSVEVGGDDGECV 120
Query: 74 VCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C+E + K++PC H FH CI W+ + SCPVCR
Sbjct: 121 ICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCR 160
>gi|357121846|ref|XP_003562628.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 173
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 55 SELTVSSLPTVAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ ++SL A G C +C++ F GK++PCGH FH C+ W+ + SCPVC
Sbjct: 56 SKAAIASLKEAPARGGSEDCAICLDAFEA---GKEMPCGHRFHGGCLERWLGVHGSCPVC 112
Query: 113 RS 114
RS
Sbjct: 113 RS 114
>gi|21362321|ref|NP_653111.1| RING finger protein 126 [Mus musculus]
gi|76363367|sp|Q91YL2.1|RN126_MOUSE RecName: Full=RING finger protein 126
gi|16741449|gb|AAH16543.1| Ring finger protein 126 [Mus musculus]
gi|74191730|dbj|BAE32824.1| unnamed protein product [Mus musculus]
Length = 313
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC E
Sbjct: 188 LDTIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKE 236
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H+FH +CI W+ +SCPVCR +
Sbjct: 237 DYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 277
>gi|322795670|gb|EFZ18349.1| hypothetical protein SINV_04512 [Solenopsis invicta]
Length = 316
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E+F + P +Q+PC HV+HA CI W+ L +CP+CR +
Sbjct: 239 QCSVCWEDFKLSEPVRQLPCQHVYHAPCIVPWLELHGTCPICRQNL 284
>gi|148699716|gb|EDL31663.1| ring finger protein 126, isoform CRA_b [Mus musculus]
Length = 303
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC E
Sbjct: 178 LDTIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKE 226
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H+FH +CI W+ +SCPVCR +
Sbjct: 227 DYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 267
>gi|388508450|gb|AFK42291.1| unknown [Medicago truncatula]
Length = 202
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 7 LAINTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA 66
+ +NT G +ID + +L+E + + + T QP + ++ ++ ++ +
Sbjct: 48 ILVNT-FTQGMVVIDGASSLEELFNNLGSATKTG----QPPA------TKESIEAMEKIE 96
Query: 67 ATEG---RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
EG C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 97 IEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIHGSCPVCR 146
>gi|296228567|ref|XP_002759866.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Callithrix jacchus]
Length = 304
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQ 87
+ L + NT P D+++ S TV++ P+ C VC E++ +Q
Sbjct: 191 QLLRKLENTGPPPADKEK-------ITSLPTVTAFPSSTDMGLECPVCKEDYTVEEEVRQ 243
Query: 88 VPCGHVFHATCISTWISLSNSCPVCRSGV 116
+PC H FH++CI W+ L ++CPVCR +
Sbjct: 244 LPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>gi|125554505|gb|EAZ00111.1| hypothetical protein OsI_22117 [Oryza sativa Indica Group]
Length = 819
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 56 ELTVSSLPTV--------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
E + SLPTV A C VC E F +++PC H +H+ CI W+ L N
Sbjct: 162 ESAIESLPTVHISPDHLPADGGSECPVCKEEFELGEAARELPCKHAYHSDCIVPWLRLHN 221
Query: 108 SCPVCRSGV 116
SCPVCR V
Sbjct: 222 SCPVCRQEV 230
>gi|348586666|ref|XP_003479089.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cavia
porcellus]
Length = 280
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ + SLPTV T+ + C VC E++
Sbjct: 169 QLLGQLENTGPPPADKEK-------------IISLPTVTVTQEQVDMGLECPVCKEDYTV 215
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 216 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 250
>gi|297829880|ref|XP_002882822.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328662|gb|EFH59081.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 59 VSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +L V E +C+VC+++F K++PC H FH+ C+ W+ L +SCPVCR
Sbjct: 199 VEALAMVKIEESLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 255
>gi|390359448|ref|XP_793428.3| PREDICTED: RING finger protein 126-like [Strongylocentrotus
purpuratus]
Length = 309
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VCME F K++PC H FH C+ TW+ + N+CPVCR +
Sbjct: 249 CPVCMEAFKGDEAAKRLPCTHFFHPKCVETWLEMHNTCPVCRKSI 293
>gi|432908641|ref|XP_004077961.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Oryzias
latipes]
Length = 303
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 19/92 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P ++++ +SSLPTV ++ + C VC E+F
Sbjct: 195 QLLGQLENTGPPPAEKEK-------------ISSLPTVNISQEQADCCMECPVCKEDFTV 241
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
P +++PC H FH+ CI W+ + ++CPVCR
Sbjct: 242 GEPVRKLPCNHFFHSDCIVPWLEMHDTCPVCR 273
>gi|18405141|ref|NP_030517.1| RING-H2 finger C2A [Arabidopsis thaliana]
gi|2642154|gb|AAB87121.1| expressed protein [Arabidopsis thaliana]
gi|3790595|gb|AAC69860.1| RING-H2 finger protein RHC2a [Arabidopsis thaliana]
gi|18377864|gb|AAL67118.1| At2g39720/T5I7.2 [Arabidopsis thaliana]
gi|20334832|gb|AAM16172.1| At2g39720/T5I7.2 [Arabidopsis thaliana]
gi|21618267|gb|AAM67317.1| unknown [Arabidopsis thaliana]
gi|330254617|gb|AEC09711.1| RING-H2 finger C2A [Arabidopsis thaliana]
Length = 401
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++ ++ C VC ENF+ +++PC H++H CI W+++ NSCPVCR
Sbjct: 194 LSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCR 242
>gi|4651204|dbj|BAA77204.1| ring finger protein [Cicer arietinum]
Length = 131
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 21/115 (18%)
Query: 6 YLAINTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTV 65
YLA+ I+SG+ D F + L + +PP ++ V +LP V
Sbjct: 17 YLAVQDGIISGTTDYDILFG--QLLENESGLKGSPP------------TAKSFVENLPLV 62
Query: 66 AATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TE C VC + + +++PC H +H CI W+S+ N+CPVCR
Sbjct: 63 ELTEEELKGKDIVCAVCKDEVMLEEKVRKLPCSHCYHGDCILPWLSIRNTCPVCR 117
>gi|224054653|ref|XP_002298344.1| predicted protein [Populus trichocarpa]
gi|222845602|gb|EEE83149.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V S+P+V +E C VC E F +++PC H++H+ CI W+++ NS
Sbjct: 155 SKAVVESMPSVEINETHVVSETYCAVCKEAFEIGDEAREMPCKHIYHSDCILPWLAMRNS 214
Query: 109 CPVCR 113
CPVCR
Sbjct: 215 CPVCR 219
>gi|357499927|ref|XP_003620252.1| RING finger protein [Medicago truncatula]
gi|355495267|gb|AES76470.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V LP + T +C VC + F KQ+PC H++H CI W+ L N
Sbjct: 177 SKSAVEKLPVIEVTGELLESDSSQCAVCKDTFALGEKAKQMPCKHIYHDDCILPWLELHN 236
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 237 SCPVCR 242
>gi|383149297|gb|AFG56541.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149299|gb|AFG56542.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149301|gb|AFG56543.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149303|gb|AFG56544.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149305|gb|AFG56545.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149307|gb|AFG56546.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149309|gb|AFG56547.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149311|gb|AFG56548.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149315|gb|AFG56550.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149317|gb|AFG56551.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149319|gb|AFG56552.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149321|gb|AFG56553.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149323|gb|AFG56554.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149325|gb|AFG56555.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149327|gb|AFG56556.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
gi|383149329|gb|AFG56557.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S V ++ V +EG +C VC+E F +++PC H+FH+ CI W+ L +
Sbjct: 42 SRSAVEAMAAVKISEGHLRSDLSQCAVCLEEFEVGSEAREMPCKHMFHSDCIQPWLKLHS 101
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 102 SCPVCR 107
>gi|218185228|gb|EEC67655.1| hypothetical protein OsI_35068 [Oryza sativa Indica Group]
Length = 269
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 58 TVSSLP----TVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+++LP TV+ TE R C VC+E F + K++PC H FHA CIS W+ +S C
Sbjct: 189 AIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKMPCSHDFHANCISEWLRVSRLC 248
Query: 110 PVCRSGVIA 118
P CR + A
Sbjct: 249 PHCRFALPA 257
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 74 VCMENFLQAFPGKQVPCGHVFHATCISTWI 103
VC+E F + +++PC H FH +C+ W+
Sbjct: 118 VCLEGFEEGEKLRKMPCEHYFHESCVFKWL 147
>gi|229596686|ref|XP_001007660.3| hypothetical protein TTHERM_00059280 [Tetrahymena thermophila]
gi|225565166|gb|EAR87415.3| hypothetical protein TTHERM_00059280 [Tetrahymena thermophila
SB210]
Length = 285
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVA-ATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
SE ++S+LPTV +TE C+VC E F + ++PC H++H++C+ TW+ +
Sbjct: 193 SENSISNLPTVTFSTEQVKEETLCECSVCKEEFTEGEQLVKMPCNHMYHSSCLVTWLKMH 252
Query: 107 NSCPVCR 113
NSCP CR
Sbjct: 253 NSCPTCR 259
>gi|326495208|dbj|BAJ85700.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506514|dbj|BAJ86575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 336
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH+ CI W+ L +SCPVCR
Sbjct: 189 AVEALPTVKIEEVVSCSVCLDDLDLGSQAKQLPCEHKFHSPCILPWLELHSSCPVCR 245
>gi|77548612|gb|ABA91409.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125576181|gb|EAZ17403.1| hypothetical protein OsJ_32926 [Oryza sativa Japonica Group]
Length = 269
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 58 TVSSLP----TVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+++LP TV+ TE R C VC+E F + K++PC H FHA CIS W+ +S C
Sbjct: 189 AIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKMPCSHDFHANCISEWLRVSRLC 248
Query: 110 PVCRSGVIA 118
P CR + A
Sbjct: 249 PHCRFALPA 257
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI 103
A E C VC+E F + +++PC H FH +C+ W+
Sbjct: 111 AREKECGVCLEGFEEGEKLRKMPCEHYFHESCVFKWL 147
>gi|357143772|ref|XP_003573045.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 328
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 59 VSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ SLPTV A +C VC E F +++PC H +H+ CI W+ L NSCPVC
Sbjct: 174 IDSLPTVRITATHMADGSQCPVCKEEFELGEAARELPCKHAYHSDCIMPWLRLHNSCPVC 233
Query: 113 RS 114
RS
Sbjct: 234 RS 235
>gi|313227204|emb|CBY22351.1| unnamed protein product [Oikopleura dioica]
Length = 279
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
CT+CM++F+ ++ + +PC H FH+ CI W+ + SCP CR+ V+
Sbjct: 231 CTICMDDFVMSYVVRTLPCKHYFHSDCIDPWLRRNASCPTCRAAVV 276
>gi|313219709|emb|CBY30629.1| unnamed protein product [Oikopleura dioica]
Length = 279
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
CT+CM++F+ ++ + +PC H FH+ CI W+ + SCP CR+ V+
Sbjct: 231 CTICMDDFVMSYVVRTLPCKHYFHSDCIDPWLRRNASCPTCRAAVV 276
>gi|297728841|ref|NP_001176784.1| Os12g0140233 [Oryza sativa Japonica Group]
gi|77553619|gb|ABA96415.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|77553620|gb|ABA96416.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125574391|gb|EAZ15675.1| hypothetical protein OsJ_31088 [Oryza sativa Japonica Group]
gi|255670037|dbj|BAH95512.1| Os12g0140233 [Oryza sativa Japonica Group]
Length = 199
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
A E C VC+E+F ++PC H FHATCI W+ LS+ CP+CR
Sbjct: 143 ARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCR 189
>gi|255545450|ref|XP_002513785.1| zinc finger protein, putative [Ricinus communis]
gi|223546871|gb|EEF48368.1| zinc finger protein, putative [Ricinus communis]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E TV ++P+V + C VC E F +++PC H++H CI W+ L NSC
Sbjct: 209 ESTVGAIPSVKINASHLVNDSDCPVCKEEFKVGGEARELPCKHIYHTDCIVPWLRLHNSC 268
Query: 110 PVCRSGV 116
PVCR +
Sbjct: 269 PVCRQAL 275
>gi|218191638|gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indica Group]
Length = 327
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ SLPT C VC E+F +Q+PC HV+H+ CI W+ L NSCPVCR
Sbjct: 179 AIDSLPT-------CPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCR 227
>gi|413916021|gb|AFW55953.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 197
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++ ++PTV +E C +C E+ A +++PC H++H+ CI W+ L NSCP+CR
Sbjct: 85 SIEAVPTVEVSESGETCAICKEDLPLAAAARRLPCRHLYHSPCIVPWLELRNSCPICR 142
>gi|357487061|ref|XP_003613818.1| RING finger protein [Medicago truncatula]
gi|355515153|gb|AES96776.1| RING finger protein [Medicago truncatula]
Length = 218
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 7 LAINTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA 66
+ +NT G +ID + +L+E + + + T QP + ++ ++ ++ +
Sbjct: 48 ILVNT-FTQGMVVIDGASSLEELFNNLGSATKTG----QPPA------TKESIEAMEKIE 96
Query: 67 ATEG---RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
EG C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 97 IEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIHGSCPVCR 146
>gi|147854704|emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
Length = 371
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + LPT+ T +C VC ++F KQ+PC H++H
Sbjct: 183 ENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYH 242
Query: 96 ATCISTWISLSNSCPVCR 113
CI W+ L NSCPVCR
Sbjct: 243 NDCILPWLELHNSCPVCR 260
>gi|328791627|ref|XP_623158.2| PREDICTED: RING finger protein 126-like [Apis mellifera]
gi|380017013|ref|XP_003692461.1| PREDICTED: RING finger protein 126-like [Apis florea]
Length = 309
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +PTV + +C+VC E+F + P KQ+PC H++HA CI W+ L +CP+C
Sbjct: 194 IDEIPTVTVNQYHVDSKLQCSVCWEDFKLSEPVKQLPCLHLYHAPCIVPWLELHGTCPIC 253
Query: 113 RS 114
R
Sbjct: 254 RQ 255
>gi|428173594|gb|EKX42495.1| hypothetical protein GUITHDRAFT_141168 [Guillardia theta CCMP2712]
Length = 1546
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHD------GQTNSELTVSSLPTVAATEGRCTVCMENF 79
LD T + + PP +S + GQT+ + + PT C++C+ NF
Sbjct: 1401 LDTFPTFKFDENKLPPSFSASRSSEAEGQTEGQTDGQDEEDNRPT-------CSICLGNF 1453
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +PC HVFH CI W+S+S CP+C+ VI+
Sbjct: 1454 FTGEDCRMLPCLHVFHKNCIDQWLSMSQECPLCKRSVIS 1492
>gi|296086359|emb|CBI31948.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 16 GSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTV--AATEGRCT 73
G +I+ + + D L + + PP ++ ++ ++P+V +G C
Sbjct: 187 GMIVIEGNSSFDSLLRELASKGGQPP------------ATKASIEAMPSVEVGGDDGECV 234
Query: 74 VCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C+E + K++PC H FH CI W+ + SCPVCR
Sbjct: 235 ICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCR 274
>gi|440790488|gb|ELR11770.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 474
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+A TE C VC E Q GK++PCGH+ H C+ W+ +CP+CR+ V+
Sbjct: 269 LADTEQICIVCREELTQ---GKRLPCGHILHFHCLLNWLQRQQTCPICRTSVL 318
>gi|351703763|gb|EHB06682.1| RING finger protein 115 [Heterocephalus glaber]
Length = 306
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + NT P D+++ ++SLPTV T+ + C VC +++
Sbjct: 193 QLLGQLENTGPPPADKEK-------------ITSLPTVTVTQEQVDTGLECPVCKDDYTV 239
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH++CI W+ L ++CPVCR +
Sbjct: 240 EEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 274
>gi|357128907|ref|XP_003566111.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ K++PC H FH++CI W+ L +SCPVCR
Sbjct: 263 VVEALPTVKIEEVVSCSVCLDDLELGSQAKKMPCEHKFHSSCILPWLELHSSCPVCR 319
>gi|225457493|ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
vinifera]
gi|359491811|ref|XP_003634328.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 2 [Vitis
vinifera]
Length = 369
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + LPT+ T +C VC ++F KQ+PC H++H
Sbjct: 181 ENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYH 240
Query: 96 ATCISTWISLSNSCPVCR 113
CI W+ L NSCPVCR
Sbjct: 241 NDCILPWLELHNSCPVCR 258
>gi|255565950|ref|XP_002523963.1| zinc finger protein, putative [Ricinus communis]
gi|223536690|gb|EEF38331.1| zinc finger protein, putative [Ricinus communis]
Length = 116
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C VC + F + KQ+PC HV+H CI W+ L NSCPVCR
Sbjct: 3 QCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCPVCR 45
>gi|361068109|gb|AEW08366.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168476|gb|AFG67326.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168478|gb|AFG67328.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168479|gb|AFG67329.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168480|gb|AFG67330.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168481|gb|AFG67331.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168483|gb|AFG67333.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168484|gb|AFG67334.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168486|gb|AFG67336.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168488|gb|AFG67338.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168489|gb|AFG67339.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168490|gb|AFG67340.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168491|gb|AFG67341.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168492|gb|AFG67342.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
gi|383168493|gb|AFG67343.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
Length = 132
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATE----GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S +V +L V A+ G+C VC + F K++PC H++HA CI W++ NSCP
Sbjct: 57 SRASVDALEEVKASGKDAVGQCAVCKDEFELGKYAKRMPCNHMYHADCILPWLARHNSCP 116
Query: 111 VCR 113
VCR
Sbjct: 117 VCR 119
>gi|226528092|ref|NP_001152137.1| protein binding protein [Zea mays]
gi|195653145|gb|ACG46040.1| protein binding protein [Zea mays]
gi|413950986|gb|AFW83635.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 179
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ SL A E +CT+C E F ++ CGH +H CI W+S N+CPVC++ V
Sbjct: 118 SFGSLRFAAEVERKCTICQEEFQSNEEMGRLVCGHSYHVLCIKQWLSQKNTCPVCKTAV 176
>gi|224104391|ref|XP_002313421.1| predicted protein [Populus trichocarpa]
gi|222849829|gb|EEE87376.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S++ + S+P+V +E C VC E F +++PC H++H+ CI W+++ NS
Sbjct: 154 SKVVIESMPSVEINETHVISETYCAVCKEAFEIGNEAREMPCKHIYHSDCIFPWLAMRNS 213
Query: 109 CPVCR 113
CPVCR
Sbjct: 214 CPVCR 218
>gi|115487274|ref|NP_001066124.1| Os12g0140700 [Oryza sativa Japonica Group]
gi|77553627|gb|ABA96423.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113648631|dbj|BAF29143.1| Os12g0140700 [Oryza sativa Japonica Group]
gi|125578461|gb|EAZ19607.1| hypothetical protein OsJ_35183 [Oryza sativa Japonica Group]
Length = 197
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
A E C VC+E+F ++PC H FHATCI W+ LS+ CP+CR
Sbjct: 141 ARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCR 187
>gi|116788818|gb|ABK25012.1| unknown [Picea sitchensis]
Length = 377
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 21 DESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFL 80
+ + LDE + +T P + ++ TV E C VC + F
Sbjct: 160 NRRYTLDEVMEQLTQQFPDGGRCGPPPASRSAVDAMPTVRIAEKHLCIESHCAVCTDEFE 219
Query: 81 QAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++HA CI W++ NSCPVCR
Sbjct: 220 IGGEAREMPCKHIYHADCILPWLAQHNSCPVCR 252
>gi|383168487|gb|AFG67337.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
Length = 132
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATE----GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S +V +L V A+ G+C VC + F K++PC H++HA CI W++ NSCP
Sbjct: 57 SRASVDALEEVKASGKDAVGQCAVCKDEFELGKYAKRMPCNHMYHADCILPWLARHNSCP 116
Query: 111 VCR 113
VCR
Sbjct: 117 VCR 119
>gi|255581502|ref|XP_002531557.1| zinc finger protein, putative [Ricinus communis]
gi|223528818|gb|EEF30823.1| zinc finger protein, putative [Ricinus communis]
Length = 356
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+P + + E C VC E F +++PC H++H+ CI W+SL NS
Sbjct: 144 SKTAIESMPVINIISDHVSMESHCAVCKEAFEINTEAREMPCKHIYHSDCILPWLSLRNS 203
Query: 109 CPVCR 113
CPVCR
Sbjct: 204 CPVCR 208
>gi|147906635|ref|NP_001087376.1| ring finger protein 115 [Xenopus laevis]
gi|50927251|gb|AAH79688.1| MGC80300 protein [Xenopus laevis]
Length = 295
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQ 81
+ L + N+ P D+D+ + SLPTV T + C VC E++
Sbjct: 184 QLLGQLENSGPPPADKDK-------------IVSLPTVTVTREQVAMGLECPVCKEDYTV 230
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H FH CI W+ L ++CPVCR +
Sbjct: 231 EEQVRQLPCNHFFHGDCIVPWLELHDTCPVCRKSL 265
>gi|344303990|gb|EGW34239.1| hypothetical protein SPAPADRAFT_148821 [Spathaspora passalidarum
NRRL Y-27907]
Length = 363
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 61 SLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++PT + +C VC E F +Q+ C H FH C+ +WI SNSCP CR
Sbjct: 308 TVPTEVFRDEKCVVCFEEFTDVNDIRQLNCTHSFHYRCLKSWIYYSNSCPTCR 360
>gi|410912188|ref|XP_003969572.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Takifugu
rubripes]
Length = 621
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ V++ +AA + C +C ++ L A +++PCGH+FH +C+ +W+ SCP CR+
Sbjct: 324 ARFAVATAEELAANDDDCAICWDSMLTA---RKLPCGHLFHNSCLRSWLEQDTSCPTCRT 380
Query: 115 GV 116
+
Sbjct: 381 SL 382
>gi|357487057|ref|XP_003613816.1| RING finger protein [Medicago truncatula]
gi|355515151|gb|AES96774.1| RING finger protein [Medicago truncatula]
Length = 222
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
G C VC+E F K++PC H FH CI W+ + SCPVCR
Sbjct: 113 GECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIHGSCPVCR 156
>gi|326676503|ref|XP_003200594.1| PREDICTED: e3 ubiquitin-protein ligase RNF115 [Danio rerio]
Length = 301
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 59 VSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV AA C VC E F +Q+PC H FH++CI W+ L ++CPVC
Sbjct: 206 ISSLPTVSISSEQAACRLECPVCREEFSVGESVRQLPCLHYFHSSCIVPWLQLHDTCPVC 265
Query: 113 RSGV 116
R +
Sbjct: 266 RKSL 269
>gi|125569906|gb|EAZ11421.1| hypothetical protein OsJ_01289 [Oryza sativa Japonica Group]
Length = 278
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 58 TVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V S+PTV G C VC+E++ ++PC H FHA CI W+ + +SCPVC
Sbjct: 143 AVESMPTVEVAAGGDCDSACAVCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVC 202
Query: 113 R 113
R
Sbjct: 203 R 203
>gi|125532850|gb|EAY79415.1| hypothetical protein OsI_34548 [Oryza sativa Indica Group]
Length = 228
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
C VC+E F K VP CGHVFHA CI W+++ NSCPVCR V+
Sbjct: 119 CPVCLEAFAGDDGVKVVPACGHVFHAACIDQWLAVRNSCPVCRCAVV 165
>gi|428169892|gb|EKX38822.1| hypothetical protein GUITHDRAFT_115148 [Guillardia theta CCMP2712]
Length = 248
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
P S D + N ++ TV + C VC E F K +PCGH FH C+ W+
Sbjct: 157 PASRDARFNLDMK-----TVQGKDVVCAVCQEEFPVNGKAKMMPCGHPFHYDCLMEWLER 211
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 212 KNSCPICR 219
>gi|301103480|ref|XP_002900826.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101581|gb|EEY59633.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 454
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 59 VSSLPTVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+SSLPT T G C +C NF+ +PC HVFH C+ WI +NSCP+C+
Sbjct: 390 LSSLPTYRWTHGNGEDTCIICQYNFVPNDRAMTLPCAHVFHEDCVGGWIRENNSCPLCKR 449
Query: 115 GV 116
+
Sbjct: 450 EI 451
>gi|348504343|ref|XP_003439721.1| PREDICTED: RING finger protein 126-like [Oreochromis niloticus]
Length = 320
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D+D+ + SLPTV TE C VC E++
Sbjct: 190 QLLNQFENTGPPPADRDK-------------IKSLPTVQITEEHVASGLECPVCKEDYSV 236
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 237 GENVRQLPCNHMFHNDCIVPWLEQHDTCPVCRKSL 271
>gi|324512077|gb|ADY45012.1| E3 ubiquitin-protein ligase RNF115 [Ascaris suum]
Length = 238
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+CT CME F QA Q+ C HVFH CI W+ N+CP+CR V A
Sbjct: 178 QCTTCMERFKQAERVAQLDCHHVFHRECIVPWLQRHNTCPICRQAVDA 225
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D+DQP+ + L + S A + C+VC+ + + +++PC H FH CI
Sbjct: 517 DEDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGDKLRKLPCSHEFHVHCIDR 575
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 576 WLSENSTCPICRRAVLS 592
>gi|356502289|ref|XP_003519952.1| PREDICTED: RING finger protein 126-like [Glycine max]
Length = 319
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ +LP+V + E +C VC+E+ K++PC H FH CI +W+ L SCPVCR
Sbjct: 213 AIEALPSVTSEEKFQCPVCLEDVEVGSEAKEMPCMHKFHGDCIVSWLKLHGSCPVCR 269
>gi|449440012|ref|XP_004137779.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449483396|ref|XP_004156578.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 316
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + SLP V E C VC E F +++PC H++H CI W+S+ NS
Sbjct: 108 SKAAIESLPVVKILANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNS 167
Query: 109 CPVCR 113
CPVCR
Sbjct: 168 CPVCR 172
>gi|326512982|dbj|BAK03398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 58 TVSSLPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV +E C VC++ F K++PC H FH CI W+ +SCPVCR
Sbjct: 200 AVATLPTVKISEAATCPVCLDEFAAGGEAKEMPCKHRFHDMCILPWLETHSSCPVCR 256
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTV--AATEGR----CTVCMENFLQAFPGKQVPCGHVFH 95
D D P+ G T ++ S T A+ EG C+VC+ + Q +++PC H FH
Sbjct: 641 DDDHPR---GLTKEQIDNLSTRTYSQASLEGEIGRACSVCINEYAQGNKLRRLPCSHEFH 697
Query: 96 ATCISTWISLSNSCPVCRSGVIA 118
CI W+S +N+CP+CR ++A
Sbjct: 698 IHCIDRWLSENNTCPICRQPILA 720
>gi|226504624|ref|NP_001147307.1| protein binding protein [Zea mays]
gi|195609736|gb|ACG26698.1| protein binding protein [Zea mays]
gi|414589559|tpg|DAA40130.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
gi|414589560|tpg|DAA40131.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 324
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATEG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP +A TE C VC EN + +++PC H+FH C+ W+
Sbjct: 218 SKEVVANLPVIAVTEEVMSRLGSETECAVCRENLVVDDKMQELPCKHLFHPLCLKPWLDE 277
Query: 106 SNSCPVCR 113
+NSCP+CR
Sbjct: 278 NNSCPICR 285
>gi|297827579|ref|XP_002881672.1| hypothetical protein ARALYDRAFT_903223 [Arabidopsis lyrata subsp.
lyrata]
gi|297327511|gb|EFH57931.1| hypothetical protein ARALYDRAFT_903223 [Arabidopsis lyrata subsp.
lyrata]
Length = 399
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
++ C VC ENF+ +++PC H++H CI W+++ NSCPVCR
Sbjct: 198 SQSHCAVCKENFVLQSSAREMPCNHIYHPDCILPWLAIRNSCPVCR 243
>gi|449478392|ref|XP_004155306.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 196
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
Q PK H S+ ++ ++P++ +E C +C++ KQ+PC H FH CI
Sbjct: 70 QATPK-HGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHKFHGDCIQK 128
Query: 102 WISLSNSCPVCR 113
W+ L SCPVCR
Sbjct: 129 WLELHGSCPVCR 140
>gi|449435338|ref|XP_004135452.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 207
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 55 SELTVSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
S+ ++ ++P++ +E C +C++ KQ+PC H FH CI W+ L SCPVCR
Sbjct: 81 SKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHKFHGDCIQKWLELHGSCPVCR 140
>gi|224035579|gb|ACN36865.1| unknown [Zea mays]
gi|414589558|tpg|DAA40129.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 271
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATEG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP +A TE C VC EN + +++PC H+FH C+ W+
Sbjct: 165 SKEVVANLPVIAVTEEVMSRLGSETECAVCRENLVVDDKMQELPCKHLFHPLCLKPWLDE 224
Query: 106 SNSCPVCR 113
+NSCP+CR
Sbjct: 225 NNSCPICR 232
>gi|219363367|ref|NP_001136896.1| uncharacterized protein LOC100217052 [Zea mays]
gi|194697504|gb|ACF82836.1| unknown [Zea mays]
gi|413923840|gb|AFW63772.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 330
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 22 ESFNLDEALTMI-TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMEN 78
E++ LD+A ++ ++ D + P G+ ++ V +LPTV E +C VC +
Sbjct: 177 ETYFLDDADDLLFGQLAAADADHEPPPGKCGRPAAKAAVEALPTVVVLEADAQCAVCKDG 236
Query: 79 FLQAFP-GKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++H CI W+++ N+CP+CR
Sbjct: 237 VEAGEERARRLPCAHLYHDGCILPWLAIRNTCPLCR 272
>gi|326489075|dbj|BAK01521.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326489306|dbj|BAK01636.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
C +C ++ A +++PCGH++H+ CI W+ + NSCPVCRS
Sbjct: 158 CAICKDDLPLAVAARRLPCGHLYHSVCIVQWLEMHNSCPVCRS 200
>gi|326488199|dbj|BAJ89938.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493608|dbj|BAJ85265.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 180
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ ++SL V A G C +C++ F GK++PCGH FH C+ W+ + S
Sbjct: 64 SKAAIASLKEVQAPGGEGGSLGDCAICLDAFGA---GKEMPCGHRFHGECLERWLGVHGS 120
Query: 109 CPVCR 113
CPVCR
Sbjct: 121 CPVCR 125
>gi|281208178|gb|EFA82356.1| hypothetical protein PPL_04781 [Polysphondylium pallidum PN500]
Length = 607
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 47 KSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
K + TN ++ + T+ C VC E+ GK++PCGH+ H +C+ +W+
Sbjct: 253 KKYRNITNERFPDATEAELNNTDRICIVCREDMTV---GKKLPCGHILHMSCLRSWLERQ 309
Query: 107 NSCPVCRSGVI 117
SCP+CR+ V+
Sbjct: 310 QSCPICRADVL 320
>gi|51090501|dbj|BAD35703.1| zinc finger-like [Oryza sativa Japonica Group]
Length = 331
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 56 ELTVSSLPTV--------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
E + SLPTV A C VC E F +++PC H +H+ CI W+ L N
Sbjct: 164 ESAIESLPTVHISPDHLPADGGSECPVCKEEFELGEAARELPCKHAYHSDCIVPWLRLHN 223
Query: 108 SCPVCRSGV 116
SCPVCR V
Sbjct: 224 SCPVCRQEV 232
>gi|242090909|ref|XP_002441287.1| hypothetical protein SORBIDRAFT_09g023840 [Sorghum bicolor]
gi|241946572|gb|EES19717.1| hypothetical protein SORBIDRAFT_09g023840 [Sorghum bicolor]
Length = 330
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LPTV E C+VC+++ KQ+PC H FH+ CI W+ L +SCPVCR
Sbjct: 192 VEALPTVQIAEVVSCSVCLDDLELGSHAKQMPCEHKFHSPCILPWLELHSSCPVCR 247
>gi|125532845|gb|EAY79410.1| hypothetical protein OsI_34539 [Oryza sativa Indica Group]
Length = 178
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
C VC+E F K VP CGHVFHA CI W+++ NSCPVCR V+
Sbjct: 46 CPVCLEAFAGDDGVKVVPACGHVFHAACIDQWLAVRNSCPVCRCAVV 92
>gi|115479315|ref|NP_001063251.1| Os09g0434200 [Oryza sativa Japonica Group]
gi|50726036|dbj|BAD33561.1| putative ABI3-interacting protein 2, AIP2 [Oryza sativa Japonica
Group]
gi|113631484|dbj|BAF25165.1| Os09g0434200 [Oryza sativa Japonica Group]
gi|125563836|gb|EAZ09216.1| hypothetical protein OsI_31491 [Oryza sativa Indica Group]
gi|215692777|dbj|BAG88195.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737157|dbj|BAG96086.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 9 INTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT 68
+NT V G D L+E+L + PP S+ V++LP V T
Sbjct: 184 LNTMTVDG----DLEAALEESLQNVMANPKVPP------------ASKEVVANLPVVTVT 227
Query: 69 EG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E +C VC E+ L +++PC H+FH C+ W+ +NSCP+CR
Sbjct: 228 EEIIARLGKETQCAVCRESLLVDDKMQELPCKHLFHPPCLKPWLDENNSCPICR 281
>gi|110289519|gb|ABG66235.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 228
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
C VC+E F K VP CGHVFHA CI W+++ NSCPVCR V+
Sbjct: 119 CPVCLEAFAGDDGVKVVPACGHVFHAACIDQWLAVRNSCPVCRCAVV 165
>gi|296081746|emb|CBI20751.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C ENF+ +++PC H FH C+ W+
Sbjct: 187 SKEVVANLPVITLTEDALSKLSGDAECAICKENFVVDDKMQELPCKHTFHPPCLKPWLDK 246
Query: 106 SNSCPVCRSGVI 117
NSCP+CR ++
Sbjct: 247 HNSCPICRHELL 258
>gi|303277205|ref|XP_003057896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460553|gb|EEH57847.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 397
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 18 PIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCME 77
P+ N +E T + ++ P S D + V T+ RC VC+E
Sbjct: 292 PVFQWKENGEEEATAVEGATAPGPGPGPGPSEDAPAPAPPPAKKAVRVCETDARCAVCLE 351
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +++PC H +H C+ W + S CPVC+ V
Sbjct: 352 TYVAGDALRRLPCLHAYHKDCVDQWFARSVECPVCKHDV 390
>gi|225429746|ref|XP_002282370.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 isoform 1 [Vitis
vinifera]
Length = 317
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C ENF+ +++PC H FH C+ W+
Sbjct: 211 SKEVVANLPVITLTEDALSKLSGDAECAICKENFVVDDKMQELPCKHTFHPPCLKPWLDK 270
Query: 106 SNSCPVCRSGVI 117
NSCP+CR ++
Sbjct: 271 HNSCPICRHELL 282
>gi|223949399|gb|ACN28783.1| unknown [Zea mays]
gi|414589356|tpg|DAA39927.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 233
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 1 MASPYYL-AINTNIVSGSPIIDESFNLDEALTMITNTSS----TPPDQDQPKSHDGQTNS 55
+ P+++ ++ + SG+P+ D LT + + Q + H G
Sbjct: 74 LQPPFHIHRVHGSSGSGAPLNPRHRRGDAGLTNEEFREAMDQLRKDEYRQQQKHGGGGRG 133
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQV---PCGHVFHATCISTWISLSNSCPVC 112
L + E CT+C+E FL PG+QV PC H FH CI+ W+ SCPVC
Sbjct: 134 NLRTGK--ETSEEEKVCTICLETFL---PGEQVAVTPCNHTFHQGCIAPWVQGHGSCPVC 188
Query: 113 R 113
R
Sbjct: 189 R 189
>gi|115607074|gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
Length = 302
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 33 ITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGH 92
I N +P + ++ +G S L + + P + C VC +NFL K +PC H
Sbjct: 113 IPNRQHSPASKAAMEALEGIKISSLMLENDPVIP-----CPVCKDNFLLDMEVKMLPCKH 167
Query: 93 VFHATCISTWISLSNSCPVCR 113
++H+ CI W+ ++NSCPVCR
Sbjct: 168 MYHSDCILPWLEVNNSCPVCR 188
>gi|344243363|gb|EGV99466.1| RING finger protein 126 [Cricetulus griseus]
Length = 135
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 10 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 58
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH +CI W+ +SCPVCR +
Sbjct: 59 DYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 97
>gi|349603972|gb|AEP99650.1| E3 ubiquitin-protein ligase RLIM-like protein, partial [Equus
caballus]
Length = 225
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 142 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 200
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 201 WLSENSTCPICRRAVLA 217
>gi|242049380|ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor]
gi|241925811|gb|EER98955.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor]
Length = 324
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATEG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP +A TE C VC EN + +++PC H+FH C+ W+
Sbjct: 218 SKEVVANLPVIAVTEEVIARLGSETECAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDE 277
Query: 106 SNSCPVCR 113
+NSCP+CR
Sbjct: 278 NNSCPICR 285
>gi|326492930|dbj|BAJ90321.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508900|dbj|BAJ86843.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
L V ++ A +G C VC + +Q ++PC HV+H CI W+++ NSCPVCR
Sbjct: 242 LQVVAISGKEAAQG-CAVCKDGIVQGELATRLPCAHVYHGACIGPWLAIRNSCPVCR 297
>gi|359476301|ref|XP_003631814.1| PREDICTED: E3 ubiquitin-protein ligase AIP2 isoform 2 [Vitis
vinifera]
Length = 312
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C ENF+ +++PC H FH C+ W+
Sbjct: 206 SKEVVANLPVITLTEDALSKLSGDAECAICKENFVVDDKMQELPCKHTFHPPCLKPWLDK 265
Query: 106 SNSCPVCRSGVI 117
NSCP+CR ++
Sbjct: 266 HNSCPICRHELL 277
>gi|15238295|ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
gi|61211690|sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName:
Full=COP1-interacting protein 8
gi|5929906|gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|8843756|dbj|BAA97304.1| COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|19698865|gb|AAL91168.1| COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|30984560|gb|AAP42743.1| At5g64920 [Arabidopsis thaliana]
gi|111146876|gb|ABH07378.1| COP1-interacting protein 8 [Arabidopsis thaliana]
gi|332010587|gb|AED97970.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
Length = 334
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 65 VAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V+++EG C VC + + GK++PCGH +H CI W+ NSCPVCR
Sbjct: 246 VSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298
>gi|449439501|ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449439503|ref|XP_004137525.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
gi|449439505|ref|XP_004137526.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 3
[Cucumis sativus]
gi|449503086|ref|XP_004161827.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449503089|ref|XP_004161828.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
gi|449503091|ref|XP_004161829.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 3
[Cucumis sativus]
Length = 378
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFH 95
++ P + S+ + LP + TE +C VC + F K +PC H++H
Sbjct: 188 ENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYH 247
Query: 96 ATCISTWISLSNSCPVCR 113
A CI W+ L NSCPVCR
Sbjct: 248 ADCIIPWLELHNSCPVCR 265
>gi|242095088|ref|XP_002438034.1| hypothetical protein SORBIDRAFT_10g007000 [Sorghum bicolor]
gi|241916257|gb|EER89401.1| hypothetical protein SORBIDRAFT_10g007000 [Sorghum bicolor]
Length = 334
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 56 ELTVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E + SLPTV + +C VC E F +++PC H +H CI W+ L NSC
Sbjct: 170 ESAIESLPTVQVSPANLSDGSQCPVCKEEFELGEAARELPCKHAYHTDCIVPWLRLHNSC 229
Query: 110 PVCR 113
PVCR
Sbjct: 230 PVCR 233
>gi|357461573|ref|XP_003601068.1| RING finger protein [Medicago truncatula]
gi|355490116|gb|AES71319.1| RING finger protein [Medicago truncatula]
Length = 328
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E ++++PTV C VC E F +++PC H++H+ CI W+ L NSC
Sbjct: 199 ERGINAIPTVKIESKNLKENSHCPVCQEEFEIGGEARELPCKHIYHSDCIVPWLRLHNSC 258
Query: 110 PVCRSGV 116
P+CR +
Sbjct: 259 PICRQEI 265
>gi|303272427|ref|XP_003055575.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463549|gb|EEH60827.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 342
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 33 ITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPG----KQV 88
I N + + + N S +AA + C +C E+ + PG K++
Sbjct: 251 IRNFRRRVEEFIRYRRVTANLNERFPDGSAEDLAANDDACIICREDMVFGVPGAMRPKKL 310
Query: 89 PCGHVFHATCISTWISLSNSCPVCRSGVI 117
PCGH+FH C+ +W+ +CP CR+ V+
Sbjct: 311 PCGHLFHLGCLKSWLERQQACPTCRAPVL 339
>gi|297824021|ref|XP_002879893.1| ring-H2 finger C1A [Arabidopsis lyrata subsp. lyrata]
gi|297325732|gb|EFH56152.1| ring-H2 finger C1A [Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 10 NTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA--- 66
NT P ++E F E L+ T PP P+S ++ +LPT+
Sbjct: 138 NTGDYFFGPGLEELF---EQLSAGTTRRGPPP---APRS---------SIDALPTIKIAQ 182
Query: 67 ----ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++ C VC + F KQ+PC H++H+ CI W+ NSCPVCR
Sbjct: 183 RHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 233
>gi|38454178|gb|AAR20783.1| At3g13430 [Arabidopsis thaliana]
gi|44681454|gb|AAS47667.1| At3g13430 [Arabidopsis thaliana]
Length = 315
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C+VC+++F K++PC H FH+ C+ W+ L +SCPVCR
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>gi|15231238|ref|NP_187951.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79313215|ref|NP_001030687.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334185314|ref|NP_001189879.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9280292|dbj|BAB01747.1| unnamed protein product [Arabidopsis thaliana]
gi|332641826|gb|AEE75347.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332641827|gb|AEE75348.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332641828|gb|AEE75349.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 315
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C+VC+++F K++PC H FH+ C+ W+ L +SCPVCR
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>gi|396081204|gb|AFN82822.1| hypothetical protein EROM_040540 [Encephalitozoon romaleae SJ-2008]
Length = 246
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CT+C +N++ K +PCGH FH CI W+ L ++CP+C+ +
Sbjct: 188 CTICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|154296995|ref|XP_001548926.1| hypothetical protein BC1G_12586 [Botryotinia fuckeliana B05.10]
Length = 620
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 59 VSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+SSLP A E G C+VCM++ + +PC H FH +C + W+S N+CP
Sbjct: 372 ISSLPKKALDEKMLGPEGKGECSVCMDDVFISTEVVVLPCSHWFHESCANAWLSAHNTCP 431
Query: 111 VCRSGVIA 118
+CR G+ A
Sbjct: 432 ICRKGIGA 439
>gi|449484437|ref|XP_004156883.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis
sativus]
Length = 187
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENF-LQAFPGKQVPCGHVFHATCIST 101
++QP++ + + +S L + +G C+VC++ + ++PCGHV+H +CI
Sbjct: 107 EEQPRAEGWRGVAVERLSKLKS-EEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFK 165
Query: 102 WISLSNSCPVCRS 114
W+S SNSCP+CRS
Sbjct: 166 WLSSSNSCPLCRS 178
>gi|413944047|gb|AFW76696.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 56 ELTVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E + SLPTV + +C VC E F +++PC H +H CI W+ L NSC
Sbjct: 185 ESAIESLPTVQVSPAHLSDGSQCPVCKEEFEIGEAARELPCKHAYHTDCIVPWLRLHNSC 244
Query: 110 PVCR 113
PVCR
Sbjct: 245 PVCR 248
>gi|347838456|emb|CCD53028.1| hypothetical protein [Botryotinia fuckeliana]
Length = 690
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 59 VSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+SSLP A E G C+VCM++ + +PC H FH +C + W+S N+CP
Sbjct: 442 ISSLPKKALDEKMLGPEGKGECSVCMDDVFISTEVVVLPCSHWFHESCANAWLSAHNTCP 501
Query: 111 VCRSGVIA 118
+CR G+ A
Sbjct: 502 ICRKGIGA 509
>gi|302772529|ref|XP_002969682.1| hypothetical protein SELMODRAFT_12113 [Selaginella moellendorffii]
gi|300162193|gb|EFJ28806.1| hypothetical protein SELMODRAFT_12113 [Selaginella moellendorffii]
Length = 397
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
N ++ + ++ C +C E A K++PCGH+FH C+ +W+ +CP CR
Sbjct: 274 NERFPDATAEELGRSDATCIICREEMSTA---KKLPCGHLFHVHCLRSWLERQQTCPTCR 330
Query: 114 SGVIA 118
S VIA
Sbjct: 331 SPVIA 335
>gi|302799068|ref|XP_002981293.1| hypothetical protein SELMODRAFT_114410 [Selaginella moellendorffii]
gi|300150833|gb|EFJ17481.1| hypothetical protein SELMODRAFT_114410 [Selaginella moellendorffii]
Length = 426
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
N ++ + ++ C +C E A K++PCGH+FH C+ +W+ +CP CR
Sbjct: 274 NERFPDATAEELGRSDATCIICREEMSTA---KKLPCGHLFHVHCLRSWLERQQTCPTCR 330
Query: 114 SGVIA 118
S VIA
Sbjct: 331 SPVIA 335
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C+VC+ ++Q +++PC H FH CI W+S +N+CP+CR +++
Sbjct: 722 CSVCINEYVQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPILS 768
>gi|432853495|ref|XP_004067735.1| PREDICTED: RING finger protein 126-like [Oryzias latipes]
Length = 320
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D+D+ + SLPTV T+ C VC E++
Sbjct: 192 QLLNQFENTGPPPADRDK-------------IKSLPTVQVTDEHVASGLECPVCKEDYCV 238
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 239 GENVRQLPCNHMFHNDCIVPWLEQHDTCPVCRKSL 273
>gi|45382265|ref|NP_990159.1| E3 ubiquitin-protein ligase RLIM [Gallus gallus]
gi|4959046|gb|AAD34210.1|AF069993_1 LIM domain interacting RING finger protein [Gallus gallus]
Length = 593
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D DQP+ G T ++ ++ T+ C+VC+ + + +++PC H +H CI
Sbjct: 510 DDDQPR---GLTKEQIDNLAMRNFGETDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 566
Query: 100 STWISLSNSCPVCRSGVIA 118
+ W+S +++CP+CR V+A
Sbjct: 567 ARWLSENSTCPICRRAVLA 585
>gi|357472841|ref|XP_003606705.1| RING finger protein [Medicago truncatula]
gi|355507760|gb|AES88902.1| RING finger protein [Medicago truncatula]
Length = 369
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTV------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + S+PTV + E C VC E F +++PC H++H+ CI W+++ NS
Sbjct: 158 SKAAIESMPTVEICEEHVSCELHCAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNS 217
Query: 109 CPVCR 113
CPVCR
Sbjct: 218 CPVCR 222
>gi|223470527|gb|ACM90519.1| ABI3-interacting protein 2-2 [Triticum aestivum]
gi|223703118|gb|ACN21975.1| ABI3-interacting protein 2-1 protein [Triticum aestivum]
Length = 323
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 12 NIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG- 70
N +SG ++ + L+ +L IT PP S+ V++LP V TE
Sbjct: 188 NTLSGDAELESA--LEASLQGITAQPKVPP------------ASKEVVANLPVVTVTEEV 233
Query: 71 --------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC EN + +++PC H+FH C+ W+ +NSCP+CR
Sbjct: 234 IARLGSETECAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDENNSCPICR 284
>gi|223470525|gb|ACM90518.1| ABI3-interacting protein 2-1 [Triticum aestivum]
gi|223703116|gb|ACN21974.1| ABI3-interacting protein 2-1 protein [Triticum aestivum]
Length = 323
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 12 NIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG- 70
N +SG ++ + L+ +L IT PP S+ V++LP V TE
Sbjct: 188 NTLSGDAELESA--LEASLQGITAQPKVPP------------ASKEVVANLPVVTVTEEV 233
Query: 71 --------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC EN + +++PC H+FH C+ W+ +NSCP+CR
Sbjct: 234 IARLGSETECAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDENNSCPICR 284
>gi|357118150|ref|XP_003560821.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Brachypodium
distachyon]
Length = 181
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 51 GQTNSELTVSSLPTV-----AATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWIS 104
G+ N LT L T+ A+ G C VC+E F +++P C H FHA C+ +W+
Sbjct: 54 GEVNKVLTADELDTLPCYDFDASGGDCAVCLEAFEAGDRCRRLPRCQHSFHAPCVDSWLK 113
Query: 105 LSNSCPVCRSGVIA 118
S CPVCR+ V+
Sbjct: 114 KSRCCPVCRADVVG 127
>gi|403362515|gb|EJY80984.1| hypothetical protein OXYTRI_21625 [Oxytricha trifallax]
Length = 457
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRC------------ 72
N+D+ L + + S+ Q + H T E + +P V +E C
Sbjct: 353 NMDDILQRVIDMSA-----QQQQEHKKPTKKE-AIQKIPVVNISEKHCKKKDGSEEVETP 406
Query: 73 --TVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TVC EN +PCGH+FH C+ W+ N+CPVCR
Sbjct: 407 LCTVCQENLPIGEKAMIIPCGHIFHPDCVLPWLKDHNTCPVCR 449
>gi|361067921|gb|AEW08272.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C VC+E F +++PC H+FH+ CI W+ L +SCPVCR
Sbjct: 65 QCAVCLEEFELGSEAREMPCKHMFHSDCIQPWLKLHSSCPVCR 107
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTV--AATEGR----CTVCMENFLQAFPGKQVPCGHVFH 95
D + + H G T ++ + T A+ EG C+VC+ + Q +++PC H FH
Sbjct: 433 DDEDDEHHRGLTKEQIDNLATRTYGQASLEGEIGRACSVCINEYAQGNKLRRLPCSHEFH 492
Query: 96 ATCISTWISLSNSCPVCRSGVI 117
CI W+S +N+CP+CR ++
Sbjct: 493 IHCIDRWLSENNTCPICRQPIL 514
>gi|332375354|gb|AEE62818.1| unknown [Dendroctonus ponderosae]
Length = 147
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 64 TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T+ T +C VC++ F K++PC HVFH CI W+S +NSCPVCR
Sbjct: 62 TILQTGLQCPVCLKEFPSHDKVKKMPCKHVFHPDCILPWLSKTNSCPVCR 111
>gi|17561408|ref|NP_505969.1| Protein SEL-11 [Caenorhabditis elegans]
gi|74964862|sp|Q20798.1|HRD1_CAEEL RecName: Full=E3 ubiquitin-protein ligase hrd-1; AltName:
Full=Suppressor/enhancer of lin-12; Flags: Precursor
gi|3877655|emb|CAA96657.1| Protein SEL-11 [Caenorhabditis elegans]
Length = 610
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S +AA + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 274 NSQFPVVSAEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
Query: 114 SGV 116
+ +
Sbjct: 334 TDI 336
>gi|224053891|ref|XP_002298031.1| predicted protein [Populus trichocarpa]
gi|222845289|gb|EEE82836.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG----RCTVCMENFLQAFPGKQVPCGHVFHAT 97
D + PK+ Q+ S+ ++ +L V G C VC+E K++PC H++H
Sbjct: 134 DNEGPKA---QSASKESIENLEEVKIDRGSSNLECPVCLETISTGSEAKRMPCFHIYHGK 190
Query: 98 CISTWISLSNSCPVCR 113
CI W+ SN+CPVCR
Sbjct: 191 CIVEWLMNSNTCPVCR 206
>gi|308504293|ref|XP_003114330.1| CRE-SEL-11 protein [Caenorhabditis remanei]
gi|308261715|gb|EFP05668.1| CRE-SEL-11 protein [Caenorhabditis remanei]
Length = 634
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S +AA + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 291 NSQFPVVSSDELAAMDATCIICREEMTVEAAPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 350
Query: 114 SGV 116
+ +
Sbjct: 351 TDI 353
>gi|374720904|gb|AEZ67840.1| AGAP002758-PA [Anopheles stephensi]
Length = 421
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E+++ P +++PC HV+H CI W+ L +CP+CRS +
Sbjct: 224 QCSVCFEDYVAGEPVRKLPCLHVYHEPCIIPWLELHGTCPICRSSL 269
>gi|198435608|ref|XP_002126393.1| PREDICTED: similar to ring finger protein 126 [Ciona intestinalis]
Length = 140
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVAAT------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ TV++LP + E +C+VCME F ++ C HVFH CI W+ L ++
Sbjct: 31 SKRTVANLPVIVVNKDHTGDECQCSVCMEEFEVGHNATKLGCSHVFHVHCIKLWLELHST 90
Query: 109 CPVCRSGV 116
CP+CR V
Sbjct: 91 CPICRKPV 98
>gi|168050235|ref|XP_001777565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671050|gb|EDQ57608.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFH 95
++ P H S+ V ++PT+ ++ +C VC + F +Q+PC H++H
Sbjct: 330 ENDPSRHGAPPASKSAVEAMPTIQISQEHLGTDAMQCAVCKDEFELGALVRQMPCKHMYH 389
Query: 96 ATCISTWISLSNSCPVCR 113
A CI W++ NSCPVCR
Sbjct: 390 ADCILPWLAQHNSCPVCR 407
>gi|158260255|dbj|BAF82305.1| unnamed protein product [Homo sapiens]
Length = 311
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 186 LDAIITQLLNQFENTGPPSADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 234
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 235 DYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 275
>gi|125605806|gb|EAZ44842.1| hypothetical protein OsJ_29480 [Oryza sativa Japonica Group]
Length = 271
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 9 INTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT 68
+NT V G D L+E+L + PP S+ V++LP V T
Sbjct: 135 LNTMTVDG----DLEAALEESLQNVMANPKVPPA------------SKEVVANLPVVTVT 178
Query: 69 EG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E +C VC E+ L +++PC H+FH C+ W+ +NSCP+CR
Sbjct: 179 EEIIARLGKETQCAVCRESLLVDDKMQELPCKHLFHPPCLKPWLDENNSCPICR 232
>gi|342326454|gb|AEL23142.1| RING finger protein 181 [Cherax quadricarinatus]
Length = 155
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ L TV AT+G +C VC++ + + K++PC H H++CI W+ +NSCP+CR +
Sbjct: 64 IEKLNTVTATKGGQCPVCLKEWTEGEEMKELPCKHSLHSSCILPWLKKTNSCPMCRHEL 122
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 400 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 458
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 459 WLSENSTCPICRRAVLA 475
>gi|405954784|gb|EKC22127.1| hypothetical protein CGI_10002749 [Crassostrea gigas]
Length = 289
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ SLP V T+ + C++CME+F K++PC H +H CI TW+ + +CPV
Sbjct: 196 KIDSLPNVKVTQPQVDNILQCSICMEDFELHENVKKLPCEHHYHKVCIVTWLEMHGTCPV 255
Query: 112 CR 113
CR
Sbjct: 256 CR 257
>gi|403374141|gb|EJY87008.1| zinc finger family protein [Oxytricha trifallax]
Length = 456
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRC------------ 72
N+D+ L + + ++ Q + H T E + +P V +E C
Sbjct: 352 NMDDILQRVIDMTA-----QQQQEHKKPTKKE-AIEKIPVVNISEKHCKKKDGSDQLETP 405
Query: 73 --TVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TVC EN +PCGH+FH C+ W+ N+CPVCR
Sbjct: 406 LCTVCQENLPIGEKAMIIPCGHIFHPDCVLPWLKDHNTCPVCR 448
>gi|413924934|gb|AFW64866.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 140
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 24 FNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR---CTVCMENFL 80
++D + + + P P Q+ +VSS PTV A C +C+++F+
Sbjct: 43 IDVDLQVMLARARAGEGPHDGVPPRPTRQSPGWRSVSSTPTVEAERDGNRGCAICLDDFV 102
Query: 81 QAFPGKQVPC--GHVFHATCISTWISLSNSCPVCR 113
VPC GH FH CI++W+ SN+CP+CR
Sbjct: 103 DGVEVAVVPCSGGHQFHPGCIASWLGRSNTCPLCR 137
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 65 VAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +GR C+VC+ + Q +++PC H FH CI W+S +N+CP+CR +++
Sbjct: 653 LEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILS 707
>gi|432101127|gb|ELK29411.1| RING finger protein 126 [Myotis davidii]
Length = 309
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 184 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVTVTEEHVGSGLECPVCKD 232
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 233 DYELGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 271
>gi|449449881|ref|XP_004142693.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 321
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
SE + +PTV E C VC E F +++ C H++H+ CI W+ L NS
Sbjct: 197 SEEAIERIPTVKIEAEHLKNESHCPVCKEEFEVGGEARELSCKHIYHSECIVPWLRLHNS 256
Query: 109 CPVCRSGV 116
CPVCR +
Sbjct: 257 CPVCRQEM 264
>gi|148223407|ref|NP_001085602.1| E3 ubiquitin-protein ligase RNF181 [Xenopus laevis]
gi|82201112|sp|Q6GPV5.1|RN181_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|49256561|gb|AAH73002.1| MGC82583 protein [Xenopus laevis]
Length = 156
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V SLP V T +C VC+ F + +Q+PC H+FH+ CI W+ +NS
Sbjct: 56 SKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNS 115
Query: 109 CPVCRSGV 116
CP+CR +
Sbjct: 116 CPLCRHEL 123
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 400 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 458
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 459 WLSENSTCPICRRAVLA 475
>gi|345320732|ref|XP_001515794.2| PREDICTED: RING finger protein 126-like [Ornithorhynchus anatinus]
Length = 297
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE + C VC E
Sbjct: 172 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVKITEEQVGSGLECPVCKE 220
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 221 DYTVDESVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL 259
>gi|297797513|ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
lyrata]
gi|297312476|gb|EFH42900.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 65 VAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V ++EG C VC + + GK++PCGH +H CI W+ NSCPVCR
Sbjct: 244 VTSSEGETVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIMPWLGTRNSCPVCR 296
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 599
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 600 WLSENSTCPICRRAVLA 616
>gi|383149313|gb|AFG56549.1| Pinus taeda anonymous locus 2_4925_01 genomic sequence
Length = 135
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C VC+E F +++PC H+FH+ CI W+ L +SCPVCR
Sbjct: 65 QCAVCLEEFEVGSEAREMPCKHMFHSDCIQPWLKLHSSCPVCR 107
>gi|313226325|emb|CBY21469.1| unnamed protein product [Oikopleura dioica]
Length = 526
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T+G C +C + F A +++PCGH FH++C+ W+ SCP+CR
Sbjct: 360 TKGECLICWDTFSTA---RRLPCGHCFHSSCLRQWLEQDASCPICR 402
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 529 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 587
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 588 WLSENSTCPICRRAVLA 604
>gi|19074138|ref|NP_584744.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi GB-M1]
gi|19068780|emb|CAD25248.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 246
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CT+C +N++ K +PCGH FH CI W+ L ++CP+C+ +
Sbjct: 188 CTICFDNYIPGIKLKFLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|449329011|gb|AGE95286.1| hypothetical protein ECU04_0610 [Encephalitozoon cuniculi]
Length = 246
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CT+C +N++ K +PCGH FH CI W+ L ++CP+C+ +
Sbjct: 188 CTICFDNYIPGIKLKFLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 527 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 585
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 586 WLSENSTCPICRRAVLA 602
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 539 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 597
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 598 WLSENSTCPICRRAVLA 614
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 599
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 600 WLSENSTCPICRRAVLA 616
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 528 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 586
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 587 WLSENSTCPICRRAVLA 603
>gi|225455740|ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268065 [Vitis vinifera]
Length = 439
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V +LP V T+G C VC + KQ+PC H +H CI W+ + N
Sbjct: 353 SKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWLGIRN 412
Query: 108 SCPVCR 113
+CPVCR
Sbjct: 413 TCPVCR 418
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 599
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 600 WLSENSTCPICRRAVLA 616
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 529 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 587
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 588 WLSENSTCPICRRAVLA 604
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 528 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 586
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 587 WLSENSTCPICRRAVLA 603
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 65 VAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +GR C+VC+ + Q +++PC H FH CI W+S +N+CP+CR +++
Sbjct: 692 LEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILS 746
>gi|367054468|ref|XP_003657612.1| hypothetical protein THITE_2123477 [Thielavia terrestris NRRL 8126]
gi|347004878|gb|AEO71276.1| hypothetical protein THITE_2123477 [Thielavia terrestris NRRL 8126]
Length = 399
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ +C VC+++ ++ +PCGH FH C+ W+ L N+CPVCR V
Sbjct: 315 KAKCIVCVDDMVKGDKAAVLPCGHFFHGDCVMPWLKLHNTCPVCRRSV 362
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 599
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 600 WLSENSTCPICRRAVLA 616
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 537 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 595
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 596 WLSENSTCPICRRAVLA 612
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 475 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 533
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 534 WLSENSTCPICRRAVLA 550
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 526 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 584
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 585 WLSENSTCPICRRAVLA 601
>gi|194238506|ref|XP_001914736.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 126-like [Equus
caballus]
Length = 303
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 177 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGCGLECPVCK 225
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+++ +Q+PC H+FH CI W+ +SCPVCR
Sbjct: 226 DDYRLGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRK 263
>gi|410921174|ref|XP_003974058.1| PREDICTED: RING finger protein 126-like [Takifugu rubripes]
Length = 304
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D D+ + SLPTV TE C VC E++
Sbjct: 180 QLLNQFENTGPPPADGDK-------------IKSLPTVQITEEHVASGLECPVCKEDYSV 226
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 227 GENVRQLPCNHMFHNNCIVPWLQQHDTCPVCRKSL 261
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D+DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 517 DEDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 575
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 576 WLSENSTCPICRRAVLS 592
>gi|18405518|ref|NP_565942.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
gi|42571155|ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
gi|42571157|ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
gi|2623297|gb|AAB86443.1| expressed protein [Arabidopsis thaliana]
gi|3790583|gb|AAC69854.1| RING-H2 finger protein RHC1a [Arabidopsis thaliana]
gi|22655078|gb|AAM98130.1| expressed protein [Arabidopsis thaliana]
gi|30984552|gb|AAP42739.1| At2g40830 [Arabidopsis thaliana]
gi|330254792|gb|AEC09886.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
gi|330254793|gb|AEC09887.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
gi|330254794|gb|AEC09888.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]
Length = 328
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 10 NTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA--- 66
NT P ++E F E L+ T PP P+S + +LPT+
Sbjct: 136 NTGDYFFGPGLEELF---EQLSAGTTRRGPPP---APRS---------AIDALPTIKIAQ 180
Query: 67 ----ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++ C VC + F KQ+PC H++H+ CI W+ NSCPVCR
Sbjct: 181 RHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 599
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 600 WLSENSTCPICRRAVLA 616
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 539 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 597
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 598 WLSENSTCPICRRAVLA 614
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 540 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 598
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 599 WLSENSTCPICRRAVLA 615
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D+DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 517 DEDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 575
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 576 WLSENSTCPICRRAVLS 592
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D+DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 517 DEDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 575
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 576 WLSENSTCPICRRAVLS 592
>gi|403368233|gb|EJY83947.1| zinc finger family protein [Oxytricha trifallax]
Length = 457
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRC------------ 72
N+D+ L + + S+ Q + H T E + +P V +E C
Sbjct: 353 NMDDILQRVIDMSA-----QQQQEHKKPTKKE-AIQKIPVVNISEKHCKKKDGSEEVETP 406
Query: 73 --TVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T+C EN +PCGH+FH C+ W+ N+CPVCR
Sbjct: 407 LCTICQENLPIGEKAMIIPCGHIFHPDCVLPWLKDHNTCPVCR 449
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CTVC+ NF +++PC HVFH CI W+ ++ CP+CR +
Sbjct: 450 CTVCLSNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCREDI 494
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 537 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 595
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 596 WLSENSTCPICRRAVLA 612
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 533 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 591
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 592 WLSENSTCPICRRAVLA 608
>gi|8920240|emb|CAB96178.1| AK000559 hypothetical protein, similar to (U06944) PRAJA1 [Mus
musculus] [Homo sapiens]
Length = 163
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 38 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 86
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 87 DYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 125
>gi|37622894|ref|NP_919442.1| RING finger protein 126 [Homo sapiens]
gi|7020737|dbj|BAA91254.1| unnamed protein product [Homo sapiens]
gi|19263501|gb|AAH25374.1| Ring finger protein 126 [Homo sapiens]
gi|119581572|gb|EAW61168.1| ring finger protein 126, isoform CRA_b [Homo sapiens]
gi|119581577|gb|EAW61173.1| ring finger protein 126, isoform CRA_b [Homo sapiens]
gi|410208564|gb|JAA01501.1| ring finger protein 126 [Pan troglodytes]
gi|410247556|gb|JAA11745.1| ring finger protein 126 [Pan troglodytes]
gi|410338305|gb|JAA38099.1| ring finger protein 126 [Pan troglodytes]
Length = 311
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 233
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 234 DDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 275
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 559 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 617
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 618 WLSENSTCPICRRAVLA 634
>gi|297838567|ref|XP_002887165.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333006|gb|EFH63424.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 21 DESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFL 80
D +N DE + + P P + + TV+ A E C +C E F
Sbjct: 91 DLVYNTDEEFADVMPSVQIGP----PPASQSAIEAVRTVTITEEDLAKEKVCAICKEEFE 146
Query: 81 QAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
GK++ C H++H++CI +W+++ N+CP+CR V
Sbjct: 147 VGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>gi|357473053|ref|XP_003606811.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
gi|355507866|gb|AES89008.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
Length = 112
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 14/72 (19%)
Query: 59 VSSLPTVA--ATEGRCTVCMENF------------LQAFPGKQVPCGHVFHATCISTWIS 104
V +LP V + C++CME+F L ++VPCGHV+H+ CI+ W+
Sbjct: 39 VENLPEVVDFTKDDVCSICMEDFEESHNSEVGGNSLFRVSNRRVPCGHVYHSNCIAEWLD 98
Query: 105 LSNSCPVCRSGV 116
NSCP+CR +
Sbjct: 99 RCNSCPLCRHHI 110
>gi|198422303|ref|XP_002124964.1| PREDICTED: similar to RING finger protein 150 [Ciona intestinalis]
Length = 385
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+ +TE C +C+EN+ A +++PC H+FH C+ W+ ++CP+C+ +I
Sbjct: 259 IVSTESVCAICIENYKTAEVVRELPCRHIFHKKCVDPWLHTKHTCPMCKINII 311
>gi|386781856|ref|NP_001248194.1| RING finger protein 126 [Macaca mulatta]
gi|402903468|ref|XP_003914587.1| PREDICTED: RING finger protein 126 [Papio anubis]
gi|380787065|gb|AFE65408.1| RING finger protein 126 [Macaca mulatta]
gi|383419831|gb|AFH33129.1| RING finger protein 126 [Macaca mulatta]
Length = 311
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 233
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 234 DDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 275
>gi|391326115|ref|XP_003737570.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Metaseiulus
occidentalis]
Length = 226
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 30 LTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP 89
L + T P +DQ Q E+ +S P A +C+VCME+F++ +++
Sbjct: 103 LNQLEGTGQAPLAKDQI-----QAIPEVKIS--PEQVAANMQCSVCMEDFVKDEVTRRLV 155
Query: 90 CGHVFHATCISTWISLSNSCPVCR 113
CGH FH CI W+ L +CP+CR
Sbjct: 156 CGHHFHTPCIVPWLELHATCPICR 179
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 536 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 594
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 595 WLSENSTCPICRRAVLA 611
>gi|395831261|ref|XP_003788723.1| PREDICTED: RING finger protein 126 [Otolemur garnettii]
Length = 313
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 188 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 236
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 237 DYALGESVRQLPCNHLFHNGCIVPWLEQHDSCPVCRKSLTG 277
>gi|332255811|ref|XP_003277022.1| PREDICTED: RING finger protein 126 [Nomascus leucogenys]
Length = 311
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 233
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 234 DDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 275
>gi|389600783|ref|XP_001563588.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504515|emb|CAM42158.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 491
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A + RCT+C E+ + K++PCGH +H C+ W+ ++CP CR+ ++
Sbjct: 284 ARDARCTICYEDMMPGGGTKRLPCGHCYHIDCLERWLEGHSTCPYCRANIM 334
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
PK Q +L +L E +C+VC+ F + +++PC H++H++CI W+
Sbjct: 255 PKGLTKQQIKQLPKRTLNQANIPEDKCSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQN 314
Query: 106 SNSCPVCRSGV 116
+ CP+C++ +
Sbjct: 315 NKQCPLCKTEI 325
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 534 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 592
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 593 WLSENSTCPICRRAVLA 609
>gi|301133576|gb|ADK63410.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 312
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGH 92
N TPP Q + V +L +V E +C+VC++ F K++PC H
Sbjct: 157 NRYGTPPAQKE------------AVEALASVKIQEPTLQCSVCLDEFEIGVEAKEMPCEH 204
Query: 93 VFHATCISTWISLSNSCPVCR 113
FH C+ W+ L +SCPVCR
Sbjct: 205 KFHGECLLPWLELHSSCPVCR 225
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 542 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 600
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 601 WLSENSTCPICRRAVLA 617
>gi|356549870|ref|XP_003543313.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like isoform 1
[Glycine max]
gi|356549872|ref|XP_003543314.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like isoform 2
[Glycine max]
Length = 236
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 44 DQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHAT 97
+Q ++D S+ ++ ++PT+ T +C+VC+E F +++PC H++H+
Sbjct: 94 EQHITNDPLGASQSSIDAMPTIKITHEHLYSNPKCSVCIERFEVGSEARKMPCDHIYHSD 153
Query: 98 CISTWISLSNSCPVCRSGV 116
CI W+ NSCPVCR +
Sbjct: 154 CIVPWLVHHNSCPVCRGKL 172
>gi|145475351|ref|XP_001423698.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390759|emb|CAK56300.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTW 102
Q+ P + S++ + SL + CTVC E + Q Q+PC H FH+ C+ W
Sbjct: 120 QNDPNRYGSPPASQIAIDSLQKINLQSECCTVCQEEY-QTQEAVQMPCQHHFHSDCLIPW 178
Query: 103 ISLSNSCPVCRSGVI 117
+ NSCPVCR +I
Sbjct: 179 LKQHNSCPVCRFELI 193
>gi|15242399|ref|NP_197086.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9755627|emb|CAC01781.1| putative protein [Arabidopsis thaliana]
gi|16323125|gb|AAL15297.1| AT5g15820/F14F8_200 [Arabidopsis thaliana]
gi|21360417|gb|AAM47324.1| AT5g15820/F14F8_200 [Arabidopsis thaliana]
gi|332004828|gb|AED92211.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 348
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 50 DGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
DG + ELT+ L +V+ C +C + + K++PC H +H CI W+ + N+C
Sbjct: 272 DGLPDVELTIEELSSVSIV---CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTC 328
Query: 110 PVCR 113
PVCR
Sbjct: 329 PVCR 332
>gi|260784062|ref|XP_002587088.1| hypothetical protein BRAFLDRAFT_285971 [Branchiostoma floridae]
gi|229272225|gb|EEN43099.1| hypothetical protein BRAFLDRAFT_285971 [Branchiostoma floridae]
Length = 158
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 36 TSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFH 95
TS P ++ P + S P+ AA C VC+ F + K +PC H FH
Sbjct: 45 TSLAPGERQAPPASKAAVESLKAAQISPSQAAKGASCPVCLAEFDEYEFVKVMPCQHKFH 104
Query: 96 ATCISTWISLSNSCPVCR 113
+CI W+S +NSCPVCR
Sbjct: 105 PSCILPWLSKTNSCPVCR 122
>gi|357112423|ref|XP_003558008.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 344
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 58 TVSSLPTVAATEGR---CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V+ +PTV E C VC++ F K++PC H FH CI W+ +SCPVCR
Sbjct: 213 AVAGMPTVRIREASAATCPVCLDEFAAGAEAKEMPCKHWFHGECIVPWLEAHSSCPVCR 271
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 538 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 596
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 597 WLSENSTCPICRRAVLA 613
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 542 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 600
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 601 WLSENSTCPICRRAVLA 617
>gi|443705391|gb|ELU01969.1| hypothetical protein CAPTEDRAFT_165151 [Capitella teleta]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 19/102 (18%)
Query: 23 SFNLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTV 74
S LD+ ++ + N S PP D+ GQ + SLP++ ++ +C+V
Sbjct: 130 SSGLDDIVSRLLNQLEGSGPPPADK-----GQ------IESLPSIQVSQKDIDVNLQCSV 178
Query: 75 CMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C E+F KQ+PC H++H+ CI W+ +CPVCR +
Sbjct: 179 CFEDFKLDESVKQLPCQHIYHSPCIVPWLQRHGTCPVCRKNL 220
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 542 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 600
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 601 WLSENSTCPICRRAVLA 617
>gi|58332096|ref|NP_001011200.1| E3 ubiquitin-protein ligase RNF181 [Xenopus (Silurana) tropicalis]
gi|82195685|sp|Q5M974.1|RN181_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|56541182|gb|AAH87570.1| ring finger protein 181 [Xenopus (Silurana) tropicalis]
gi|89268984|emb|CAJ81968.1| novel protein containing RING finger [Xenopus (Silurana)
tropicalis]
Length = 156
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V SLP V T +C VC+ F + +Q+PC H+FH++CI W+ +NSCP+C
Sbjct: 60 VESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLC 119
Query: 113 RSGV 116
R +
Sbjct: 120 RHEL 123
>gi|302817104|ref|XP_002990229.1| hypothetical protein SELMODRAFT_18755 [Selaginella moellendorffii]
gi|302821589|ref|XP_002992456.1| hypothetical protein SELMODRAFT_7748 [Selaginella moellendorffii]
gi|300139658|gb|EFJ06394.1| hypothetical protein SELMODRAFT_7748 [Selaginella moellendorffii]
gi|300142084|gb|EFJ08789.1| hypothetical protein SELMODRAFT_18755 [Selaginella moellendorffii]
Length = 99
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ + ++P V+ T G+C VC + F +Q+PC H++H CI W++ N
Sbjct: 21 SKTAIEAMPVVSITSEHMSGDGGQCAVCKDEFELGSEVRQMPCKHLYHGDCILPWLAQHN 80
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 81 SCPVCR 86
>gi|255648297|gb|ACU24601.1| unknown [Glycine max]
Length = 236
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 44 DQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHAT 97
+Q ++D S+ ++ ++PT+ T +C+VC+E F +++PC H++H+
Sbjct: 94 EQHITNDPLGASQSSIDAMPTIKITHEHLYSNPKCSVCIERFEVGSEARKMPCDHIYHSD 153
Query: 98 CISTWISLSNSCPVCRSGV 116
CI W+ NSCPVCR +
Sbjct: 154 CIVPWLVHHNSCPVCRGKL 172
>gi|74762712|sp|Q9BV68.1|RN126_HUMAN RecName: Full=RING finger protein 126
gi|12655173|gb|AAH01442.1| Ring finger protein 126 [Homo sapiens]
Length = 326
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 233
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 234 DDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 275
>gi|348550204|ref|XP_003460922.1| PREDICTED: RING finger protein 126-like isoform 1 [Cavia porcellus]
Length = 313
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 187 GLDAIITQLLNQFENTGPPPADREK-----------IQALPTVPVTEEHVGSGLECPVCK 235
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 236 DDYALGESVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 277
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D+DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 520 DEDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 578
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 579 WLSENSTCPICRRAVLS 595
>gi|18410530|ref|NP_567039.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42572705|ref|NP_974448.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79315364|ref|NP_001030874.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15028361|gb|AAK76657.1| unknown protein [Arabidopsis thaliana]
gi|20465561|gb|AAM20263.1| unknown protein [Arabidopsis thaliana]
gi|66865932|gb|AAY57600.1| RING finger family protein [Arabidopsis thaliana]
gi|332646016|gb|AEE79537.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646017|gb|AEE79538.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646018|gb|AEE79539.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 320
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE-------GRCTVCMEN 78
L E L+ T+ PP PKS ++ +LPT+ T+ C VC +
Sbjct: 145 LIEQLSSGTHHRGPPP---APKS---------SIDALPTIKITQKHLKSSDSHCPVCKDE 192
Query: 79 FLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
F KQ+PC H++H+ CI W+ NSCPVCR
Sbjct: 193 FELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 228
>gi|218202241|gb|EEC84668.1| hypothetical protein OsI_31571 [Oryza sativa Indica Group]
Length = 308
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A P ++PCGH++HA CI+ W+SL N+CPVCR V
Sbjct: 206 ASPASRLPCGHLYHAHCIAQWLSLRNTCPVCRRSV 240
>gi|302813086|ref|XP_002988229.1| hypothetical protein SELMODRAFT_451319 [Selaginella moellendorffii]
gi|300143961|gb|EFJ10648.1| hypothetical protein SELMODRAFT_451319 [Selaginella moellendorffii]
Length = 517
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C +C E + P KQ+PC H++H CI W+ NSCPVCR
Sbjct: 329 CAICKEQLMLDEPAKQLPCLHLYHQDCILPWLGSRNSCPVCR 370
>gi|222641687|gb|EEE69819.1| hypothetical protein OsJ_29560 [Oryza sativa Japonica Group]
Length = 301
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A P ++PCGH++HA CI+ W+SL N+CPVCR V
Sbjct: 199 ASPASRLPCGHLYHAHCIAQWLSLRNTCPVCRRSV 233
>gi|348550206|ref|XP_003460923.1| PREDICTED: RING finger protein 126-like isoform 2 [Cavia porcellus]
Length = 326
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 200 GLDAIITQLLNQFENTGPPPADREK-----------IQALPTVPVTEEHVGSGLECPVCK 248
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 249 DDYALGESVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 290
>gi|449442467|ref|XP_004139003.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449520932|ref|XP_004167486.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 224
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 70 GRCTVCMENF-LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
G C+VC E + +++PCGHV+H +CI W+ +SNSCP+CR+ +
Sbjct: 175 GDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAAL 222
>gi|384245020|gb|EIE18516.1| hypothetical protein COCSUDRAFT_20585 [Coccomyxa subellipsoidea
C-169]
Length = 398
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+A +G C +C E+ K++PC HVFH C+ +W+ +CP CR+ V
Sbjct: 283 LARCDGICIICREDLAPGARNKKLPCNHVFHMHCLRSWLERQQNCPTCRASV 334
>gi|347968497|ref|XP_312165.5| AGAP002758-PA [Anopheles gambiae str. PEST]
gi|333467977|gb|EAA07852.5| AGAP002758-PA [Anopheles gambiae str. PEST]
Length = 471
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
++++PTV +E + C+VC E+F+ +++PC HV+H CI W+ L +CP+C
Sbjct: 263 IAAIPTVTISEEQVERKLQCSVCFEDFVVGESVRKLPCLHVYHEPCIIPWLELHGTCPIC 322
Query: 113 RSGV 116
R+ +
Sbjct: 323 RNSL 326
>gi|302819382|ref|XP_002991361.1| hypothetical protein SELMODRAFT_429694 [Selaginella moellendorffii]
gi|300140754|gb|EFJ07473.1| hypothetical protein SELMODRAFT_429694 [Selaginella moellendorffii]
Length = 512
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C +C E + P KQ+PC H++H CI W+ NSCPVCR
Sbjct: 324 CAICKEQLMLDEPAKQLPCLHLYHQDCILPWLGSRNSCPVCR 365
>gi|294950509|ref|XP_002786665.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239900957|gb|EER18461.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 408
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 7 LAINTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA 66
L +NT++++ + + +L E L+ T T D+ + P+ A
Sbjct: 295 LLLNTDMMASGDVYERLMDLQETLSNRTGLDQTTIDR---------------IPLQPSTA 339
Query: 67 ATEG---RCTVCMENFLQAFPGKQV-PCGHVFHATCISTWISLSNSCPVCRSGV 116
+ E +C +C+ +F + P +V PC HVFHA CI W+ + CP+C+ V
Sbjct: 340 SREHHQEQCMICLNDFAPSDPPLRVLPCSHVFHANCIDEWLRRNTDCPICKDNV 393
>gi|118388115|ref|XP_001027158.1| zinc finger protein [Tetrahymena thermophila]
gi|89308928|gb|EAS06916.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 238
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAA----TEGRCTVCMENFLQAFPGKQVPCGHVFHATC 98
Q Q S Q S ++ L V E +C +C EN+ + Q+PC H FH C
Sbjct: 161 QQQQNSSRHQPASSDKINKLAQVIVQCDDNENQCPICYENYKKGEVMNQLPCQHNFHQGC 220
Query: 99 ISTWISLSNSCPVCRSGV 116
+ W++ NSCP+CR +
Sbjct: 221 VKEWLNKHNSCPMCRKSI 238
>gi|403335079|gb|EJY66710.1| hypothetical protein OXYTRI_12999 [Oxytricha trifallax]
Length = 457
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRC------------ 72
N+D+ L + + S+ Q + H T E + +P V +E C
Sbjct: 353 NMDDILQRVIDMSAQ-----QQQEHKKPTKKE-AIQKIPVVNISEKHCKKKDGSEEVETP 406
Query: 73 --TVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TVC EN +PCGH+FH C+ W+ N+CPVCR
Sbjct: 407 LCTVCQENLPIGEKAMIIPCGHIFHPDCVLPWLKDHNTCPVCR 449
>gi|326520778|dbj|BAJ92752.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521378|dbj|BAJ96892.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 323
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATEG---------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP V TE C VC EN + +++PC H+FH C+ W+
Sbjct: 217 SKEVVANLPVVTVTEEVIARLGSETECAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDE 276
Query: 106 SNSCPVCR 113
+NSCP+CR
Sbjct: 277 NNSCPICR 284
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
PK Q +L +L + E +C+VC+ F + +++PC H++H++CI W+
Sbjct: 256 PKGLTKQQIKQLPKRTLNHDSMPEDKCSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQN 315
Query: 106 SNSCPVCRSGV 116
+ CP+C++ +
Sbjct: 316 NKQCPLCKTEI 326
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 524 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 582
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 583 WLSENSTCPICRRAVLA 599
>gi|384499255|gb|EIE89746.1| hypothetical protein RO3G_14457 [Rhizopus delemar RA 99-880]
Length = 131
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 56 ELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E + SLP TE C VC + F Q+PC H+FH CI W+ L+++C
Sbjct: 46 EQVIESLPKRELTEKEKSQEADCAVCKDAFDVTEKVIQLPCEHIFHDDCIKPWLKLNSTC 105
Query: 110 PVCRSGVI 117
PVCR V+
Sbjct: 106 PVCRKSVL 113
>gi|156539061|ref|XP_001599771.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like, partial
[Nasonia vitripennis]
Length = 150
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E+F+ +Q+PC HV+HA CI W+ L +CP+CR +
Sbjct: 56 QCSVCWEDFVLEESVRQLPCQHVYHAPCIVPWLELHGTCPICRQSL 101
>gi|414591011|tpg|DAA41582.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 191
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 55 SELTVSSLPTVAATEGR-----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
S+ +++L V A EG C +C++ GK++PCGH FH C+ W+ + +C
Sbjct: 65 SKAAIAALKEVKAGEGEDALGECAICLDAV--EGTGKEMPCGHRFHGRCLERWLGVHGNC 122
Query: 110 PVCRS 114
PVCR
Sbjct: 123 PVCRR 127
>gi|224146442|ref|XP_002326009.1| predicted protein [Populus trichocarpa]
gi|222862884|gb|EEF00391.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VC+E+F + ++PC HVFH CI W+ S SCP+CR+ V
Sbjct: 178 CVVCLEDFSSSVKLTKLPCSHVFHDKCIFRWLLYSKSCPICRTEV 222
>gi|115478112|ref|NP_001062651.1| Os09g0242800 [Oryza sativa Japonica Group]
gi|48716816|dbj|BAD23515.1| unknown protein [Oryza sativa Japonica Group]
gi|48716999|dbj|BAD23690.1| unknown protein [Oryza sativa Japonica Group]
gi|113630884|dbj|BAF24565.1| Os09g0242800 [Oryza sativa Japonica Group]
gi|215692404|dbj|BAG87824.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 163
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 34 TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR----CTVCMENFLQAFPGKQVP 89
+ S P + P + + + VS P V AT G C+VC E A ++P
Sbjct: 28 VDEESFPVEDPPPVAGGARGGRQAVVSQPPVVRATAGVAGTVCSVCTEEIAVADAVVRLP 87
Query: 90 CGHVFHATCISTWISLSNSCPVCRS 114
C H +HA CIS W+ + ++CP+CR+
Sbjct: 88 CAHWYHAGCISPWLGIRSTCPMCRA 112
>gi|342184104|emb|CCC93585.1| predicted zinc finger protein [Trypanosoma congolense IL3000]
Length = 385
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VC+E F ++ CGHVFH CI W+SL+N CP CR V
Sbjct: 335 CAVCLEQFSSDDKVHEIKCGHVFHCNCIRHWLSLNNRCPTCRYEV 379
>gi|125562867|gb|EAZ08247.1| hypothetical protein OsI_30503 [Oryza sativa Indica Group]
Length = 163
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 34 TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR----CTVCMENFLQAFPGKQVP 89
+ S P + P + + + VS P V AT G C+VC E A ++P
Sbjct: 28 VDEESFPVEDPPPVAGGARGGRQAVVSQPPVVRATAGVAGTVCSVCTEEIAVADAVVRLP 87
Query: 90 CGHVFHATCISTWISLSNSCPVCRS 114
C H +HA CIS W+ + ++CP+CR+
Sbjct: 88 CAHWYHAGCISPWLGIRSTCPMCRA 112
>gi|417398812|gb|JAA46439.1| Putative ring finger protein [Desmodus rotundus]
Length = 313
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 188 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 236
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 237 DYELGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTG 277
>gi|313241293|emb|CBY33570.1| unnamed protein product [Oikopleura dioica]
Length = 763
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T+G C +C + F A +++PCGH FH++C+ W+ SCP+CR
Sbjct: 348 TKGECLICWDTFSTA---RRLPCGHCFHSSCLRQWLEQDASCPICR 390
>gi|300175542|emb|CBK20853.2| unnamed protein product [Blastocystis hominis]
Length = 254
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS-CPVCRSGVI 117
CT+C+E + K++PCGHVFH+ C++ W+ + CPVCR G+
Sbjct: 163 CTICLETLKKGDEVKKLPCGHVFHSACVTPWLMKKRAVCPVCRQGIF 209
>gi|350417770|ref|XP_003491586.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Bombus
impatiens]
Length = 310
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 59 VSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +PT+ ++ +C+VC E+F + P KQ+PC H++H CI W+ L +CP+C
Sbjct: 196 IDEIPTITVSQCHVDSKLQCSVCWEDFKLSEPVKQLPCLHLYHTPCIVPWLELHGTCPIC 255
Query: 113 RS 114
R
Sbjct: 256 RQ 257
>gi|224120262|ref|XP_002318286.1| predicted protein [Populus trichocarpa]
gi|222858959|gb|EEE96506.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +LP V TE RC VC E F ++PC H++H+ C+ W++L N+CPVC
Sbjct: 178 IEALPIVKVTEQHLMNDMRCPVCKEIFEVGGDAMELPCKHLYHSDCVVPWLNLHNTCPVC 237
Query: 113 R 113
R
Sbjct: 238 R 238
>gi|357492307|ref|XP_003616442.1| RING finger protein [Medicago truncatula]
gi|355517777|gb|AES99400.1| RING finger protein [Medicago truncatula]
Length = 391
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V LPT+ E C VC E F +++PC H++H CI W+++ NSCPV
Sbjct: 173 AVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPV 232
Query: 112 CR 113
CR
Sbjct: 233 CR 234
>gi|255080668|ref|XP_002503907.1| predicted protein [Micromonas sp. RCC299]
gi|226519174|gb|ACO65165.1| predicted protein [Micromonas sp. RCC299]
Length = 244
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
+TE C VC+E++ + K +P CGH FHA CI W+ N+CPVCR G+
Sbjct: 178 STERACCVCLEDYGKGDTVKTLPRCGHRFHAHCIDRWLLCRNACPVCRVGL 228
>gi|326934440|ref|XP_003213298.1| PREDICTED: RING finger protein 126-like [Meleagris gallopavo]
Length = 328
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV T+ C VC E
Sbjct: 203 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVQITQEHVDSGLECPVCKE 251
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH +CI W+ ++CPVCR +
Sbjct: 252 DYTVGENVRQLPCNHLFHNSCIVPWLEQHDTCPVCRKSL 290
>gi|326504488|dbj|BAJ91076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 59 VSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V +LPTV C VC+E++ +++PC H FH+ CI W+ + +SCPV
Sbjct: 204 VEALPTVEVVGCGNEEDAASCAVCLEDYASGERARELPCRHRFHSQCIVPWLEMHSSCPV 263
Query: 112 CR 113
CR
Sbjct: 264 CR 265
>gi|226495011|ref|NP_001151645.1| ubiquitin-protein ligase CIP8 [Zea mays]
gi|195648348|gb|ACG43642.1| ubiquitin-protein ligase CIP8 [Zea mays]
Length = 193
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 55 SELTVSSLPTVAATEGR-----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
S+ +++L V A EG C +C++ GK++PCGH FH C+ W+ + +C
Sbjct: 67 SKAAIAALKEVKAGEGEDALGECAICLDAV--EGTGKEMPCGHCFHGRCLERWLGVHGNC 124
Query: 110 PVCRS 114
PVCR
Sbjct: 125 PVCRR 129
>gi|348500030|ref|XP_003437576.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Oreochromis
niloticus]
Length = 619
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ V++ +AA + C +C + L A +++PCGH+FH +C+ +W+ SCP CR
Sbjct: 324 TRFAVATAEELAANDDDCAICWDAMLTA---RKLPCGHLFHNSCLRSWLEQDTSCPTCRK 380
Query: 115 GV 116
+
Sbjct: 381 SL 382
>gi|296486635|tpg|DAA28748.1| TPA: ring finger protein 126-like [Bos taurus]
Length = 314
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N +S PP D+ K + +LPTV TE C VC +
Sbjct: 189 LDAIITQLLNQFENSGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 237
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ +Q+PC H FH CI W+ +SCPVCR +
Sbjct: 238 DYGLGEHVRQLPCNHFFHNGCIVPWLEQHDSCPVCRKSLTG 278
>gi|431922186|gb|ELK19277.1| RING finger protein 126 [Pteropus alecto]
Length = 414
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 288 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 336
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+++ +Q+PC H+FH CI W+ +SCPVCR
Sbjct: 337 DDYGLGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRK 374
>gi|156345279|ref|XP_001621310.1| hypothetical protein NEMVEDRAFT_v1g145359 [Nematostella vectensis]
gi|156396723|ref|XP_001637542.1| predicted protein [Nematostella vectensis]
gi|156207104|gb|EDO29210.1| predicted protein [Nematostella vectensis]
gi|156224655|gb|EDO45479.1| predicted protein [Nematostella vectensis]
Length = 106
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ V +LP V T+ C +C+ ++ + KQ+PC H+FH CI W+ +
Sbjct: 4 SKEAVQALPAVKVTDKHLKELSTSSCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKT 63
Query: 107 NSCPVCR 113
NSCPVCR
Sbjct: 64 NSCPVCR 70
>gi|281341339|gb|EFB16923.1| hypothetical protein PANDA_012711 [Ailuropoda melanoleuca]
Length = 308
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 187 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 235
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 236 DDYGLGERVRQLPCSHLFHDGCIVPWLQQHDSCPVCRKSLTG 277
>gi|426223519|ref|XP_004005922.1| PREDICTED: E3 ubiquitin-protein ligase RNF181 [Ovis aries]
Length = 153
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 59 VSSLPTV----AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
V +LP + E +C VC+ F +A ++PC H+FH+ CI W+S +NSCP+CR
Sbjct: 59 VENLPRTVIRGSQAELKCPVCLLEFEEAETAIEMPCHHLFHSNCILPWLSKTNSCPLCRH 118
Query: 115 GV 116
+
Sbjct: 119 EL 120
>gi|340729326|ref|XP_003402955.1| PREDICTED: e3 ubiquitin-protein ligase RNF115-like [Bombus
terrestris]
Length = 310
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 59 VSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +PT+ ++ +C+VC E+F + P KQ+PC H++H CI W+ L +CP+C
Sbjct: 196 IDEIPTITVSQCHVDSKLQCSVCWEDFKLSEPVKQLPCLHLYHTPCIVPWLELHGTCPIC 255
Query: 113 RS 114
R
Sbjct: 256 RQ 257
>gi|326515202|dbj|BAK03514.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532004|dbj|BAK01378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 423
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKS---------HDGQTNSELTVSSLP-TVAATEGR--- 71
+L +AL +T T D D ++ H G ++SE + SLP +VA E R
Sbjct: 319 SLQDALESCADTYPTDSDDDDYENLIALDDNNHHRGASDSE--IDSLPVSVAEGESRRDE 376
Query: 72 -CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +C++ + +PC H FH CI W+ + SCPVC+S V
Sbjct: 377 PCPICLDCPADGVSLRHLPCAHKFHKECIDRWLRMRTSCPVCKSSV 422
>gi|226501244|ref|NP_001151010.1| protein binding protein [Zea mays]
gi|195643626|gb|ACG41281.1| protein binding protein [Zea mays]
Length = 230
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 8 AINTNIVSG-SPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA 66
+IN G + + +E F EA+ + D+ +P+ G + + +
Sbjct: 88 SINPRHRRGDAGLTNEEFR--EAMDQLRK------DEYRPQKKHGGGGGRGNLRTGKETS 139
Query: 67 ATEGRCTVCMENFLQAFPGKQV---PCGHVFHATCISTWISLSNSCPVCR 113
E CT+C+E FL PG+QV PC H FH CI+ W+ SCPVCR
Sbjct: 140 EEEKICTICLEAFL---PGEQVAVTPCNHTFHQGCIAPWVQGHGSCPVCR 186
>gi|302850436|ref|XP_002956745.1| hypothetical protein VOLCADRAFT_67392 [Volvox carteri f.
nagariensis]
gi|300257960|gb|EFJ42202.1| hypothetical protein VOLCADRAFT_67392 [Volvox carteri f.
nagariensis]
Length = 349
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 30 LTMITNTSSTPPDQDQPKSHDGQTNSELT--VSSLPTVAATEGR-----CTVCMENFLQA 82
L ++ + ST + + + HD ++T + P +A + R C +C E QA
Sbjct: 244 LHLVRDLYSTFRN-FRSRMHDFLRFRQVTARLDRFPDASADDLRRCDGVCIICREEMAQA 302
Query: 83 FPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
K++ CGHVFH C+ +W+ +CP CR+ V
Sbjct: 303 GSNKRLFCGHVFHLHCLRSWLERQQNCPTCRASVF 337
>gi|268576507|ref|XP_002643233.1| Hypothetical protein CBG08098 [Caenorhabditis briggsae]
Length = 423
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 57 LTVSSLPTVAAT----EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
LTVSS TV E +CTVC E+ +P + + C HVF +CI TW+ L +CP+C
Sbjct: 343 LTVSSFGTVVKVHELEEQQCTVCHEDL--TYPIR-LECSHVFCKSCIETWLDLKITCPMC 399
Query: 113 RSGVI 117
R+ VI
Sbjct: 400 RAEVI 404
>gi|125597942|gb|EAZ37722.1| hypothetical protein OsJ_22064 [Oryza sativa Japonica Group]
Length = 338
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + Q Q+PC H++H CI W+++ NSCPVCR
Sbjct: 264 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCR 305
>gi|297721555|ref|NP_001173140.1| Os02g0727700 [Oryza sativa Japonica Group]
gi|46390610|dbj|BAD16094.1| zinc finger -like [Oryza sativa Japonica Group]
gi|125540966|gb|EAY87361.1| hypothetical protein OsI_08765 [Oryza sativa Indica Group]
gi|215768802|dbj|BAH01031.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255671225|dbj|BAH91869.1| Os02g0727700 [Oryza sativa Japonica Group]
Length = 311
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 22 ESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR----CTVCME 77
++F LD+A ++ + + + P + + ++ V SLPTV R C VC +
Sbjct: 179 DTFFLDDADDVLFGQLAA--EHEPPAAKGARAAAKAAVESLPTVVVDAARGDTQCAVCKD 236
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++H CI W+++ N+CP+CR
Sbjct: 237 GMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCR 272
>gi|452824433|gb|EME31436.1| zinc finger protein [Galdieria sulphuraria]
Length = 165
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
RC VC E + Q P K++PCG +FH CI W+ N+CP+C
Sbjct: 115 RCPVCGEEYEQGGPVKKLPCGDIFHLKCIYPWLEFHNTCPLC 156
>gi|449463838|ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449519040|ref|XP_004166543.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 362
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVP 89
N TPP Q + V +LPTV +C+VC++ F K++P
Sbjct: 213 NRYGTPPAQKE------------AVDALPTVRVELEEDSCLQCSVCLDEFEVDEEAKEMP 260
Query: 90 CGHVFHATCISTWISLSNSCPVCR 113
C H FH CI W+ L +SCPVCR
Sbjct: 261 CKHKFHTGCILPWLELHSSCPVCR 284
>gi|359322291|ref|XP_542219.4| PREDICTED: RING finger protein 126 [Canis lupus familiaris]
Length = 357
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 231 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 279
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+++ +Q+PC H+FH CI W+ +SCPVCR
Sbjct: 280 DDYGLGERVRQLPCSHLFHDGCIVPWLQQHDSCPVCRK 317
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+ + Q +++PC H FH CI W+S +N+CP+CR ++
Sbjct: 298 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 343
>gi|301776282|ref|XP_002923552.1| PREDICTED: RING finger protein 126-like [Ailuropoda melanoleuca]
Length = 313
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 187 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 235
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 236 DDYGLGERVRQLPCSHLFHDGCIVPWLQQHDSCPVCRKSLTG 277
>gi|131888001|ref|NP_001076486.1| RING finger protein 126 [Danio rerio]
gi|124481675|gb|AAI33165.1| Zgc:158807 protein [Danio rerio]
Length = 309
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D+D+ + SLPTV + C VC E++
Sbjct: 189 QLLNQFENTGPPPADKDK-------------IKSLPTVQIKQEHVGAGLECPVCKEDYSA 235
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 236 GENVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL 270
>gi|341880300|gb|EGT36235.1| hypothetical protein CAEBREN_29942 [Caenorhabditis brenneri]
Length = 640
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S +A + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 288 NSQFPVVSADELATMDATCIICREEMTGEASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 347
Query: 114 SGV 116
+ +
Sbjct: 348 TDI 350
>gi|256079620|ref|XP_002576084.1| ring finger protein 11 (sid 1669) (nedd4 ww domain-binding protein
2) [Schistosoma mansoni]
gi|353230819|emb|CCD77236.1| putative ring finger protein 11 (sid 1669) (nedd4 ww domain-binding
protein 2) [Schistosoma mansoni]
Length = 468
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C+ + + +PCGH FH CI +W+ S +CP CR+GV A
Sbjct: 227 CEICLIEYQDKDRLRHLPCGHAFHMKCIDSWLKQSTTCPKCRAGVRA 273
>gi|148909153|gb|ABR17677.1| unknown [Picea sitchensis]
Length = 451
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ ++ ++PT+ T+ +C VC + F +Q+PC H++H+ CI W+ N
Sbjct: 208 SKASIGTMPTIKITQDLLVTDSTQCAVCKDEFEVGTEVRQMPCKHMYHSVCILPWLEQHN 267
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 268 SCPVCR 273
>gi|115496796|ref|NP_001068782.1| RING finger protein 126 [Bos taurus]
gi|122142118|sp|Q0II22.1|RN126_BOVIN RecName: Full=RING finger protein 126
gi|113911887|gb|AAI22845.1| Ring finger protein 126 [Bos taurus]
gi|296485365|tpg|DAA27480.1| TPA: ring finger protein 126 [Bos taurus]
Length = 313
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 188 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 236
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 237 DDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
>gi|341904416|gb|EGT60249.1| CBN-SEL-11 protein [Caenorhabditis brenneri]
Length = 641
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S +A + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 288 NSQFPVVSADELATMDATCIICREEMTGEASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 347
Query: 114 SGV 116
+ +
Sbjct: 348 TDI 350
>gi|242096436|ref|XP_002438708.1| hypothetical protein SORBIDRAFT_10g024780 [Sorghum bicolor]
gi|241916931|gb|EER90075.1| hypothetical protein SORBIDRAFT_10g024780 [Sorghum bicolor]
Length = 303
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
L V ++ A +G C VC E Q +PCGH +H CI W+++ N+CPVCR
Sbjct: 213 LQVVAVRGEEAAQG-CAVCKEGMEQGELATGLPCGHFYHGACIGPWLAIRNTCPVCR 268
>gi|449273006|gb|EMC82635.1| RING finger protein 126, partial [Columba livia]
Length = 265
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPT+ T+ C VC E
Sbjct: 140 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTIQITQEHVDSGLECPVCKE 188
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH +CI W+ ++CPVCR +
Sbjct: 189 DYTVGENVRQLPCNHLFHDSCIVPWLEQHDTCPVCRKSL 227
>gi|297734117|emb|CBI15364.3| unnamed protein product [Vitis vinifera]
Length = 1427
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V +LP V T+G C VC + KQ+PC H +H CI W+ + N
Sbjct: 1273 SKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWLGIRN 1332
Query: 108 SCPVCR 113
+CPVCR
Sbjct: 1333 TCPVCR 1338
>gi|118487194|gb|ABK95425.1| unknown [Populus trichocarpa]
Length = 264
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 122 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 181
Query: 112 CR 113
CR
Sbjct: 182 CR 183
>gi|302774280|ref|XP_002970557.1| hypothetical protein SELMODRAFT_451325 [Selaginella moellendorffii]
gi|300162073|gb|EFJ28687.1| hypothetical protein SELMODRAFT_451325 [Selaginella moellendorffii]
Length = 614
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 58 TVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
V +LPT+ + C VC + P KQ+PC H++HA CI W+ NSCP
Sbjct: 349 AVDTLPTILIEQAHLDDGSAVCAVCKDTVCVGEPAKQMPCLHLYHADCILPWLDSRNSCP 408
Query: 111 VCR 113
VCR
Sbjct: 409 VCR 411
>gi|224088631|ref|XP_002308505.1| predicted protein [Populus trichocarpa]
gi|222854481|gb|EEE92028.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 10 NTNIVSGSPIIDESF-NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT 68
N I + S ++ E N D+ + I ST P + P S + V+ LP + T
Sbjct: 163 NNTIETASNLLGELMSNFDDMIPEIMEMGSTAP-RVPPASKE-------VVAKLPVITIT 214
Query: 69 E---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E C +C EN + +++PC H FH C+ W+ NSCP+CR
Sbjct: 215 EEILAELGKDAECAICKENLVVNDKMQELPCKHRFHPPCLKPWLDEHNSCPICR 268
>gi|357457975|ref|XP_003599268.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
gi|355488316|gb|AES69519.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
Length = 342
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 59 VSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ L V E +C +C E+F G ++PC H+FH TCI W+ + NSCP+CR
Sbjct: 285 IEGLKMVEVEEVEKCAICFEDFN---VGVRIPCSHMFHMTCICDWLVIGNSCPLCR 337
>gi|440908514|gb|ELR58520.1| RING finger protein 126, partial [Bos grunniens mutus]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 19/97 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 45 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 93
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
++ +Q+PC H+FH CI W+ +SCPVCR
Sbjct: 94 DYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRK 130
>gi|357134508|ref|XP_003568859.1| PREDICTED: uncharacterized protein LOC100829493 [Brachypodium
distachyon]
Length = 538
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
RC +C+E + ++ CGH FHA+CI W+ + N+CPVC++
Sbjct: 488 RCVICLEEYGHKVSLGRLKCGHDFHASCIKKWLEVKNACPVCKA 531
>gi|115463411|ref|NP_001055305.1| Os05g0359500 [Oryza sativa Japonica Group]
gi|47777413|gb|AAT38047.1| unknown protein [Oryza sativa Japonica Group]
gi|113578856|dbj|BAF17219.1| Os05g0359500 [Oryza sativa Japonica Group]
Length = 223
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C+ F G+ +P CGH FHA C+ W L ++CP+CR+GV+
Sbjct: 136 CAICIAEFADGEEGRLLPRCGHRFHARCVDMWFQLHSTCPLCRAGVL 182
>gi|356536418|ref|XP_003536735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 286
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 58 TVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
V +LPTV + +C VC + F + Q+PC H +H C+ W+ L NSCP
Sbjct: 159 AVENLPTVTVDDDLLNSELNQCAVCQDEFEKGSKVTQMPCKHAYHGDCLIPWLRLHNSCP 218
Query: 111 VCR 113
VCR
Sbjct: 219 VCR 221
>gi|302769950|ref|XP_002968394.1| hypothetical protein SELMODRAFT_451322 [Selaginella moellendorffii]
gi|300164038|gb|EFJ30648.1| hypothetical protein SELMODRAFT_451322 [Selaginella moellendorffii]
Length = 613
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 58 TVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
V +LPT+ + C VC + P KQ+PC H++HA CI W+ NSCP
Sbjct: 352 AVDTLPTILIEQAHLDDGSAVCAVCKDTVCVGEPAKQMPCLHLYHADCILPWLDSRNSCP 411
Query: 111 VCR 113
VCR
Sbjct: 412 VCR 414
>gi|449489092|ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
Length = 333
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+V ++PT+ T C +C + FL KQ+PC H++H CI W+S +SC
Sbjct: 140 SVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 199
Query: 110 PVCR 113
P+CR
Sbjct: 200 PLCR 203
>gi|299469774|emb|CBN76628.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 315
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 50 DGQT-NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
+G+T +EL+VSS +E C VC E + ++PCGH++H C+ W+ LSN+
Sbjct: 222 EGKTIRAELSVSS------SEKDCIVCQELYAVGNTLVRLPCGHLYHEACLLKWLKLSNT 275
Query: 109 CPVCR 113
CP CR
Sbjct: 276 CPYCR 280
>gi|145521991|ref|XP_001446845.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414334|emb|CAK79448.1| unnamed protein product [Paramecium tetraurelia]
Length = 252
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 29 ALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQV 88
LT+IT + Q + Q + E + E C++CME Q Q+
Sbjct: 145 MLTLITVCTCQIKLFQQLIKRNLQLHQEDQFEE--YIGDEEIECSICMEEIRQMEKYVQL 202
Query: 89 PCGHVFHATCISTWISLSNSCPVCRS 114
PC H+FH CI W S CPVCR
Sbjct: 203 PCNHIFHLYCIGKWKSYKQLCPVCRR 228
>gi|15232246|ref|NP_191567.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7076761|emb|CAB75923.1| putative protein [Arabidopsis thaliana]
gi|56121904|gb|AAV74233.1| At3g60080 [Arabidopsis thaliana]
gi|58531334|gb|AAW78589.1| At3g60080 [Arabidopsis thaliana]
gi|110738535|dbj|BAF01193.1| hypothetical protein [Arabidopsis thaliana]
gi|332646488|gb|AEE80009.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 306
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC E+F+ +++PC H++H+ CI W+S NSCP+CR
Sbjct: 169 CAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210
>gi|449436239|ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
Length = 334
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
+V ++PT+ T C +C + FL KQ+PC H++H CI W+S +SC
Sbjct: 141 SVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 200
Query: 110 PVCR 113
P+CR
Sbjct: 201 PLCR 204
>gi|357118386|ref|XP_003560936.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 335
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 59 VSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ +LPTV + +C VC E F +++PC H +H+ CI W+ L NSCPV
Sbjct: 174 IDALPTVRVSPAHLSSDSQQCPVCKEEFELGEAARELPCKHAYHSECIVPWLRLHNSCPV 233
Query: 112 CRS 114
CR
Sbjct: 234 CRQ 236
>gi|303388944|ref|XP_003072705.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
gi|303301847|gb|ADM11345.1| hypothetical protein Eint_040550 [Encephalitozoon intestinalis ATCC
50506]
Length = 246
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +C +N++ K +PCGH FH CI W+ L ++CP+C+ +
Sbjct: 188 CAICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|302834020|ref|XP_002948573.1| hypothetical protein VOLCADRAFT_73771 [Volvox carteri f.
nagariensis]
gi|300266260|gb|EFJ50448.1| hypothetical protein VOLCADRAFT_73771 [Volvox carteri f.
nagariensis]
Length = 121
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 29 ALTMITNTSSTPPD-------QDQPKSHDGQTNSELTVSSLPT-VAATEGR--------- 71
A ++++ TP D +Q ++ G + +L ++LPT V EGR
Sbjct: 15 AHLLLSDRDFTPEDYELLCRLDEQVENRKGAKDEQL--AALPTEVVGAEGRRRSDGVPST 72
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +CME K++PC H FH C+ TW+ CPVC+ G+
Sbjct: 73 CIICMEEIAPGDVLKRLPCLHDFHGDCVDTWLRTKACCPVCQRGL 117
>gi|242052623|ref|XP_002455457.1| hypothetical protein SORBIDRAFT_03g011120 [Sorghum bicolor]
gi|241927432|gb|EES00577.1| hypothetical protein SORBIDRAFT_03g011120 [Sorghum bicolor]
Length = 359
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V ++P V G C VC+E++ +++PC H FHA CI W+ + +SCPVC
Sbjct: 209 VEAMPIVEIPSGNDDDTASCPVCLEDYAAGERAREMPCRHRFHANCIVPWLEMHSSCPVC 268
Query: 113 R 113
R
Sbjct: 269 R 269
>gi|443722532|gb|ELU11354.1| hypothetical protein CAPTEDRAFT_180387 [Capitella teleta]
Length = 341
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T RCT+C+ +F + +++PC H+FH C+ TW+S + CP+CR
Sbjct: 255 TSERCTICLSDFEDSDEVRRLPCMHLFHIGCVDTWLSSNRRCPICR 300
>gi|296232369|ref|XP_002761564.1| PREDICTED: RING finger protein 126 [Callithrix jacchus]
Length = 526
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 25 NLDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCM 76
LD +T + N ++ PP D+ K + +LPTV TE C VC
Sbjct: 400 GLDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCK 448
Query: 77 ENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+++ +Q+PC H+FH CI W+ +SCPVCR
Sbjct: 449 DDYALGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRK 486
>gi|357112229|ref|XP_003557912.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 288
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFP 84
LD+ + +T+ P P + ++ TV P + C VC + F
Sbjct: 144 GLDDLIEQLTHNDRRGP----PPASQSSIDAMPTVKITPRHLTGDSHCPVCKDKFELGSE 199
Query: 85 GKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++H+ CI W+ NSCPVCR
Sbjct: 200 AREMPCKHLYHSDCILPWLEQHNSCPVCR 228
>gi|242035753|ref|XP_002465271.1| hypothetical protein SORBIDRAFT_01g035310 [Sorghum bicolor]
gi|241919125|gb|EER92269.1| hypothetical protein SORBIDRAFT_01g035310 [Sorghum bicolor]
Length = 285
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 25 NLDEALTMIT-NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE------GRCTVCME 77
LD+ + +T N PP Q ++ ++PTV T+ C VC E
Sbjct: 144 GLDDLIEQLTQNDRRGPPPAAQS-----------SIDAMPTVKITQRHLSGDSHCPVCKE 192
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
F +++PC H++H+ CI W+ NSCPVCR
Sbjct: 193 KFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCR 228
>gi|218198599|gb|EEC81026.1| hypothetical protein OsI_23805 [Oryza sativa Indica Group]
Length = 322
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + Q Q+PC H++H CI W+++ NSCPVCR
Sbjct: 248 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCR 289
>gi|356528793|ref|XP_003532982.1| PREDICTED: uncharacterized protein LOC100793656 [Glycine max]
Length = 311
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 64 TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T A++ C +C + FL +++PC H +H+ CI W+ + N+CPVCR
Sbjct: 194 THLASDPNCPICKDEFLLDMEARELPCKHFYHSDCIIPWLRMHNTCPVCR 243
>gi|225707048|gb|ACO09370.1| Zinc finger protein 364 [Osmerus mordax]
Length = 307
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV + + C VC E F +Q+PC H FH+ CI W+ L ++CPVC
Sbjct: 214 ISSLPTVRISREQTDCRLECPVCREEFSVEESVRQLPCLHYFHSDCIVPWLELHDTCPVC 273
Query: 113 RSGV 116
R +
Sbjct: 274 RKSL 277
>gi|293334891|ref|NP_001169469.1| LOC100383341 [Zea mays]
gi|224029549|gb|ACN33850.1| unknown [Zea mays]
gi|238015278|gb|ACR38674.1| unknown [Zea mays]
gi|414877040|tpg|DAA54171.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414877041|tpg|DAA54172.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
gi|414877042|tpg|DAA54173.1| TPA: putative RING zinc finger domain superfamily protein isoform 3
[Zea mays]
Length = 346
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 58 TVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
V ++PTV G C VC+E++ +++PC H FH CI W+ + +SCP
Sbjct: 198 AVEAMPTVEIAGGNDDDDAASCPVCLEDYAPGERAREMPCRHRFHGNCIVPWLEMHSSCP 257
Query: 111 VCR 113
VCR
Sbjct: 258 VCR 260
>gi|395521044|ref|XP_003764631.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Sarcophilus
harrisii]
Length = 242
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 51 GQTNSELTVSSLPTVAA-----TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
G TN E+ S + + T C++C+ + Q +Q+PC H FH CI W++
Sbjct: 166 GLTNEEIDKFSTKSYESSINGETNKACSICVNTYTQGNKLRQLPCTHEFHVHCIDRWLAE 225
Query: 106 SNSCPVCRSGVI 117
+N+CP+CR V+
Sbjct: 226 NNTCPICRQPVL 237
>gi|327287832|ref|XP_003228632.1| PREDICTED: e3 ubiquitin-protein ligase AMFR-like [Anolis
carolinensis]
Length = 585
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V+S +AA C +C + +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 260 GNMEARFAVASPEELAANNDDCAICWDA-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 316
Query: 111 VCR 113
CR
Sbjct: 317 TCR 319
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 510 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 568
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 569 WLSENSTCPICRRAVLA 585
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + S A + C+VC+ + + +++PC H +H CI
Sbjct: 520 DDDQPRGLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 578
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V++
Sbjct: 579 WLSENSTCPICRRAVLS 595
>gi|297817300|ref|XP_002876533.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322371|gb|EFH52792.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 302
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC E+F+ +++PC H++H+ CI W+S NSCP+CR
Sbjct: 165 CAVCKEDFVVGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 206
>gi|296083916|emb|CBI24304.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 82 SIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPWLVQHNSCPV 141
Query: 112 CR 113
CR
Sbjct: 142 CR 143
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 524 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 582
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 583 WLSENSTCPICRRAVLA 599
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+ + Q +++PC H FH CI W+S +N+CP+CR ++
Sbjct: 233 CSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPIL 278
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 512 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 570
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 571 WLSENSTCPICRRAVLA 587
>gi|409080481|gb|EKM80841.1| hypothetical protein AGABI1DRAFT_37502, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 402
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 25/95 (26%)
Query: 36 TSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR-CTVCMENFLQAFPG--------- 85
T++ DQ P + T +EL AAT R C +C E+ + A G
Sbjct: 297 TATRNMDQRYPNA----TETEL--------AATSDRTCIICREDMVPAVQGQPPVSDGPN 344
Query: 86 ---KQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
K++PCGH+FH C+ +W+ SCP CR V+
Sbjct: 345 VTPKKLPCGHIFHFYCLRSWLERQQSCPTCRQTVL 379
>gi|356513870|ref|XP_003525631.1| PREDICTED: uncharacterized protein LOC100794303 [Glycine max]
Length = 304
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LP+V TE C VC + F K +PC H +H CI W+ + N+CPVCR
Sbjct: 226 VVRNLPSVVVTEADVVCAVCKDEFGVGEGVKVLPCSHRYHEDCIVPWLGIRNTCPVCR 283
>gi|357497463|ref|XP_003619020.1| RING finger protein, partial [Medicago truncatula]
gi|355494035|gb|AES75238.1| RING finger protein, partial [Medicago truncatula]
Length = 278
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ ++ +V E +CT+C+E+ K++PC H FH CI +W+ L +SCPVCR
Sbjct: 222 IEAMESVINDEKLQCTICLEDVEIGDIAKEMPCKHKFHGDCIVSWLKLHSSCPVCR 277
>gi|190898174|gb|ACE97600.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKIIQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|190898160|gb|ACE97593.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|401825978|ref|XP_003887083.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
gi|392998241|gb|AFM98102.1| hypothetical protein EHEL_040510 [Encephalitozoon hellem ATCC
50504]
Length = 246
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +C +N++ K +PCGH FH CI W+ L ++CP+C+ +
Sbjct: 188 CAICFDNYIPGIKLKLLPCGHHFHQECIDEWLDLKDTCPLCKRNI 232
>gi|148224272|ref|NP_001084974.1| RING finger protein 126-B [Xenopus laevis]
gi|76363308|sp|Q6IRP0.1|R126B_XENLA RecName: Full=RING finger protein 126-B
gi|47682841|gb|AAH70697.1| MGC83223 protein [Xenopus laevis]
Length = 312
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENF 79
+ + L NT P D D+ + +LPT+ TE C VC E++
Sbjct: 189 ITQLLNQFENTGPPPADTDK-------------IQALPTIQITEEHVGFGLECPVCKEDY 235
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 236 TVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>gi|406865653|gb|EKD18694.1| mitochondria fission 1 protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 59 VSSLPTVAATE--------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+SSLP E G C+VCM++ +PC H FH TC S W+S N+CP
Sbjct: 556 ISSLPKKNLDEKELGPEGKGECSVCMDDVTFGTEVVVLPCSHWFHETCASAWLSEHNTCP 615
Query: 111 VCRSGV 116
+CR G+
Sbjct: 616 ICRKGI 621
>gi|190898192|gb|ACE97609.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKIIQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|145514974|ref|XP_001443392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410770|emb|CAK75995.1| unnamed protein product [Paramecium tetraurelia]
Length = 179
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 46 PKSHDGQTNSELTVSSLPT-VAATEGR---CTVCMENFLQAFPGKQVPCGHVFHATCIST 101
+ G T S+ +SSL VA E + C +C E+F Q ++ C H FH C++
Sbjct: 106 EEQQQGATESQ--ISSLREHVAMIEDQQQTCYICQEDFKQDETELEMSCSHNFHKDCLTQ 163
Query: 102 WISLSNSCPVCRSGV 116
W+ ++NSCPVCR+ +
Sbjct: 164 WLKINNSCPVCRTKI 178
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D DQP+ G T ++ ++ ++ C+VC+ + + +++PC H +H CI
Sbjct: 512 DDDQPR---GLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 568
Query: 100 STWISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 569 DRWLSENSTCPICRRAVLA 587
>gi|190898158|gb|ACE97592.1| thioredoxin-related protein [Populus tremula]
gi|190898170|gb|ACE97598.1| thioredoxin-related protein [Populus tremula]
gi|190898172|gb|ACE97599.1| thioredoxin-related protein [Populus tremula]
gi|190898208|gb|ACE97617.1| thioredoxin-related protein [Populus tremula]
gi|190898212|gb|ACE97619.1| thioredoxin-related protein [Populus tremula]
gi|190898218|gb|ACE97622.1| thioredoxin-related protein [Populus tremula]
gi|190898222|gb|ACE97624.1| thioredoxin-related protein [Populus tremula]
gi|190898224|gb|ACE97625.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKIIQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|356500343|ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 309
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NS
Sbjct: 163 SRSSIDAMPTIKITQRHLRSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNS 222
Query: 109 CPVCRSGVI 117
CPVCR ++
Sbjct: 223 CPVCRQELL 231
>gi|242058411|ref|XP_002458351.1| hypothetical protein SORBIDRAFT_03g031830 [Sorghum bicolor]
gi|241930326|gb|EES03471.1| hypothetical protein SORBIDRAFT_03g031830 [Sorghum bicolor]
Length = 201
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ SS E +C++C E F ++ CGH +H CI W+S N+CPVC++ V
Sbjct: 140 SFSSFRFATEMERKCSICQEEFEANEEMGRLDCGHSYHVYCIKQWLSQKNTCPVCKTAV 198
>gi|190898226|gb|ACE97626.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKIIQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|190898200|gb|ACE97613.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|190898156|gb|ACE97591.1| thioredoxin-related protein [Populus tremula]
gi|190898162|gb|ACE97594.1| thioredoxin-related protein [Populus tremula]
gi|190898166|gb|ACE97596.1| thioredoxin-related protein [Populus tremula]
gi|190898168|gb|ACE97597.1| thioredoxin-related protein [Populus tremula]
gi|190898176|gb|ACE97601.1| thioredoxin-related protein [Populus tremula]
gi|190898178|gb|ACE97602.1| thioredoxin-related protein [Populus tremula]
gi|190898180|gb|ACE97603.1| thioredoxin-related protein [Populus tremula]
gi|190898182|gb|ACE97604.1| thioredoxin-related protein [Populus tremula]
gi|190898184|gb|ACE97605.1| thioredoxin-related protein [Populus tremula]
gi|190898186|gb|ACE97606.1| thioredoxin-related protein [Populus tremula]
gi|190898188|gb|ACE97607.1| thioredoxin-related protein [Populus tremula]
gi|190898194|gb|ACE97610.1| thioredoxin-related protein [Populus tremula]
gi|190898196|gb|ACE97611.1| thioredoxin-related protein [Populus tremula]
gi|190898198|gb|ACE97612.1| thioredoxin-related protein [Populus tremula]
gi|190898202|gb|ACE97614.1| thioredoxin-related protein [Populus tremula]
gi|190898204|gb|ACE97615.1| thioredoxin-related protein [Populus tremula]
gi|190898206|gb|ACE97616.1| thioredoxin-related protein [Populus tremula]
gi|190898210|gb|ACE97618.1| thioredoxin-related protein [Populus tremula]
gi|190898216|gb|ACE97621.1| thioredoxin-related protein [Populus tremula]
gi|190898220|gb|ACE97623.1| thioredoxin-related protein [Populus tremula]
gi|190898228|gb|ACE97627.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|18405411|ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|4204263|gb|AAD10644.1| Unknown protein [Arabidopsis thaliana]
gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|23308203|gb|AAN18071.1| At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|332195138|gb|AEE33259.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 351
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +L TV E +C+VC+++F K +PC H FH+ C+ W+ L +SCPVCR
Sbjct: 209 VEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCR 264
>gi|224050268|ref|XP_002187567.1| PREDICTED: E3 ubiquitin-protein ligase RNF103 [Taeniopygia guttata]
Length = 686
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNS---ELTVSSLPTVAATEGRCTVCMENFLQAFP 84
EA + T++ P + Q +S+ +++ E S+ P+ C VC+ENF +
Sbjct: 575 EACSCATHSCHHEPCERQARSYSLYSSAGDLEPDWSAWPSDMLHCTECVVCLENFAKGCL 634
Query: 85 GKQVPCGHVFHATCISTWISLS-NSCPVCR 113
+PCGHVFH CI W++ + CPVCR
Sbjct: 635 LMGLPCGHVFHQNCIMKWLAGGRHCCPVCR 664
>gi|427797619|gb|JAA64261.1| Putative ring finger protein, partial [Rhipicephalus pulchellus]
Length = 401
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ +PTV + + CTVCME F K++PC H FH CI W+ L +CP+
Sbjct: 228 KIEQIPTVKIVQEQVDKLLQCTVCMEEFKTGEQVKRLPCQHHFHPDCIVPWLELHGTCPI 287
Query: 112 CRS 114
CR
Sbjct: 288 CRK 290
>gi|357493781|ref|XP_003617179.1| Thioredoxin-related protein [Medicago truncatula]
gi|355518514|gb|AET00138.1| Thioredoxin-related protein [Medicago truncatula]
Length = 287
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 142 SIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPV 201
Query: 112 CR 113
CR
Sbjct: 202 CR 203
>gi|226498246|ref|NP_001149943.1| protein binding protein [Zea mays]
gi|195635651|gb|ACG37294.1| protein binding protein [Zea mays]
gi|413955854|gb|AFW88503.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413955855|gb|AFW88504.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 309
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHV 93
N TPP + + V++LPTV E C VC++ +++PC H
Sbjct: 188 NRQGTPPARKE------------AVAALPTVRVREDFTCPVCLDEVAGGGDAREMPCKHR 235
Query: 94 FHATCISTWISLSNSCPVCR 113
FH CI W+ + +SCPVCR
Sbjct: 236 FHDQCILPWLEMHSSCPVCR 255
>gi|226509910|ref|NP_001148003.1| protein binding protein [Zea mays]
gi|195615070|gb|ACG29365.1| protein binding protein [Zea mays]
gi|219884259|gb|ACL52504.1| unknown [Zea mays]
gi|413946887|gb|AFW79536.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 349
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
V ++PTV G C VC+E++ +++PC H FH+ CI W+ + +SC
Sbjct: 200 AVEAMPTVEIAGGNGNDDDTASCPVCLEDYAAGERAREMPCRHRFHSNCIVPWLEMHSSC 259
Query: 110 PVCR 113
PVCR
Sbjct: 260 PVCR 263
>gi|150866076|ref|XP_001385552.2| hypothetical protein PICST_84817 [Scheffersomyces stipitis CBS
6054]
gi|149387332|gb|ABN67523.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 568
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 54 NSELTVSSLPTVAATEGRCTVCME----------NFLQAFPG----KQVPCGHVFHATCI 99
+++L ++ + AT+ C +C E NF ++ P K +PCGH+ H C+
Sbjct: 312 DNQLRTATKEDLEATDNLCIICREDMNSVEDYETNFKKSLPARRRPKALPCGHILHMGCL 371
Query: 100 STWISLSNSCPVCRSGV 116
W+ S+SCP+CR V
Sbjct: 372 KEWLERSDSCPLCRKKV 388
>gi|357493783|ref|XP_003617180.1| Thioredoxin-related protein [Medicago truncatula]
gi|355518515|gb|AET00139.1| Thioredoxin-related protein [Medicago truncatula]
Length = 371
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 226 SIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPV 285
Query: 112 CR 113
CR
Sbjct: 286 CR 287
>gi|115478681|ref|NP_001062934.1| Os09g0344900 [Oryza sativa Japonica Group]
gi|50252865|dbj|BAD29096.1| unknown protein [Oryza sativa Japonica Group]
gi|113631167|dbj|BAF24848.1| Os09g0344900 [Oryza sativa Japonica Group]
gi|215765593|dbj|BAG87290.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201974|gb|EEC84401.1| hypothetical protein OsI_30978 [Oryza sativa Indica Group]
gi|222641387|gb|EEE69519.1| hypothetical protein OsJ_28980 [Oryza sativa Japonica Group]
Length = 227
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 47 KSHDGQTNSELTVSSLPTVAATEGR--CTVCMENFLQAFPGKQV---PCGHVFHATCIST 101
+S+ G N + S P TE CT+C+E FL G+QV PC H+FH CI+
Sbjct: 110 ESNRGGRNHAKSARSKPAPNNTEEEKACTICLETFLA---GEQVVATPCNHIFHQECITP 166
Query: 102 WISLSNSCPVCR 113
W+ +CPVCR
Sbjct: 167 WVKGHGNCPVCR 178
>gi|413946885|gb|AFW79534.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413946886|gb|AFW79535.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
V ++PTV G C VC+E++ +++PC H FH+ CI W+ + +SC
Sbjct: 200 AVEAMPTVEIAGGNGNDDDTASCPVCLEDYAAGERAREMPCRHRFHSNCIVPWLEMHSSC 259
Query: 110 PVCR 113
PVCR
Sbjct: 260 PVCR 263
>gi|356507662|ref|XP_003522583.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 309
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E + ++PTV +C VC E F +++ C H++H+ CI W+ L NSC
Sbjct: 199 ERAIEAIPTVKIESAHLKENSQCPVCQEEFEVGGEARELQCKHIYHSDCIVPWLRLHNSC 258
Query: 110 PVCRSGV 116
PVCR V
Sbjct: 259 PVCRHEV 265
>gi|125552835|gb|EAY98544.1| hypothetical protein OsI_20457 [Oryza sativa Indica Group]
Length = 286
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E RC VC + F +++PC H++HA CI W+ NSCPVCR
Sbjct: 171 AEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCR 216
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 503 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 561
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 562 WLSENSTCPICRRAVLA 578
>gi|297814594|ref|XP_002875180.1| hypothetical protein ARALYDRAFT_904560 [Arabidopsis lyrata subsp.
lyrata]
gi|297321018|gb|EFH51439.1| hypothetical protein ARALYDRAFT_904560 [Arabidopsis lyrata subsp.
lyrata]
Length = 150
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 19 IIDESFNLDE-ALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLP---TVAATEGRCTV 74
+IDE ++E A ++ TN +PP S TV LP V +G C +
Sbjct: 40 VIDEDDFINEVAWSIPTNAWRSPP------------ASRWTVEMLPNITVVMVEKGECVI 87
Query: 75 CMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C+E + + ++PC H +H C+ W+ + ++CP CR
Sbjct: 88 CLEEWSKGDMETELPCKHKYHLKCVKKWLEIHSTCPQCR 126
>gi|190898214|gb|ACE97620.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D+DQP+ G T ++ S+ ++ C+VC+ + + +++PC H +H CI
Sbjct: 519 DEDQPQ---GLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCI 575
Query: 100 STWISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 576 DRWLSENSTCPICRRAVL 593
>gi|356554225|ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max]
gi|356554227|ref|XP_003545450.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Glycine max]
gi|356554229|ref|XP_003545451.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 3
[Glycine max]
gi|356554231|ref|XP_003545452.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 4
[Glycine max]
Length = 336
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 182 SIDAMPTIKITQAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPV 241
Query: 112 CR 113
CR
Sbjct: 242 CR 243
>gi|321468766|gb|EFX79749.1| hypothetical protein DAPPUDRAFT_304341 [Daphnia pulex]
Length = 431
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+S +PTVA + + C+VC E+F A P +++ C H +H CI W+ L +CP+C
Sbjct: 207 ISQIPTVAIDQQQVEQNLQCSVCWEDFKLAEPVRKLVCEHYYHTQCIVPWLQLHGTCPIC 266
Query: 113 RSGV 116
R +
Sbjct: 267 RKAL 270
>gi|255562884|ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
gi|223538332|gb|EEF39939.1| zinc finger protein, putative [Ricinus communis]
Length = 233
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 16 GSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE-----G 70
G +I+ + +LD L + + PP S ++ SLP+V E
Sbjct: 68 GMVVIEGTESLDSLLRELAAKNGHPP------------ASRASIESLPSVDVQEIGDRDS 115
Query: 71 RCTVCMENFLQAFPG--KQVPCGHVFHATCISTWISLSNSCPVCR 113
C +C+E + K++PC H FH CI W+ + SCPVCR
Sbjct: 116 ECAICLEEWEIGAGAVVKEMPCKHRFHGNCIEKWLGIHGSCPVCR 160
>gi|190898190|gb|ACE97608.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|147788827|emb|CAN73309.1| hypothetical protein VITISV_018157 [Vitis vinifera]
Length = 220
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 63 SIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPWLVQHNSCPV 122
Query: 112 CR 113
CR
Sbjct: 123 CR 124
>gi|351715268|gb|EHB18187.1| RING finger protein 115 [Heterocephalus glaber]
Length = 135
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
++SLPTV T+ + C VC +++ +Q+ C H FH++CI W+ L ++CPVC
Sbjct: 40 ITSLPTVTVTQEQVDTGLECLVCKDDYTVEEEVRQLSCNHFFHSSCIVPWLELHDTCPVC 99
Query: 113 RSGV 116
R +
Sbjct: 100 RKSL 103
>gi|222632084|gb|EEE64216.1| hypothetical protein OsJ_19049 [Oryza sativa Japonica Group]
Length = 286
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E RC VC + F +++PC H++HA CI W+ NSCPVCR
Sbjct: 171 AEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCR 216
>gi|426197381|gb|EKV47308.1| hypothetical protein AGABI2DRAFT_69892, partial [Agaricus bisporus
var. bisporus H97]
Length = 409
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 13/66 (19%)
Query: 65 VAATEGR-CTVCMENFLQAFPG------------KQVPCGHVFHATCISTWISLSNSCPV 111
+AAT R C +C E+ + A G K++PCGH+FH C+ +W+ SCP
Sbjct: 314 LAATSDRTCIICREDMVPAVQGQPPVSDGPNVTPKKLPCGHIFHFYCLRSWLERQQSCPT 373
Query: 112 CRSGVI 117
CR V+
Sbjct: 374 CRQTVL 379
>gi|225435913|ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 336
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 179 SIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPWLVQHNSCPV 238
Query: 112 CR 113
CR
Sbjct: 239 CR 240
>gi|297826153|ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326798|gb|EFH57218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 234
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 45 QPKSHDGQTNSELTVSSLPT---VAATEGR---CTVCMENFLQAFPGKQVP-CGHVFHAT 97
+P S+ +S+ TV SLP AT+ R C +C+ F + K +P CGHVFH
Sbjct: 105 RPYSYRRGLDSQ-TVRSLPVYHYTKATKQRNEDCVICLSEFEEGETVKVIPHCGHVFHVD 163
Query: 98 CISTWISLSNSCPVCRS 114
C+ TW+S +CP+CRS
Sbjct: 164 CVDTWLSSYVTCPLCRS 180
>gi|255560227|ref|XP_002521131.1| zinc finger protein, putative [Ricinus communis]
gi|223539700|gb|EEF41282.1| zinc finger protein, putative [Ricinus communis]
Length = 223
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E C++C+E F K++PC H+FH +CI W++ S+ CP+CR
Sbjct: 167 ERSCSICLEEFQAVSEVKRMPCLHIFHGSCIDQWLNKSHHCPLCR 211
>gi|225450287|ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 312
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + F+ K++PC H++H+ CI W+S NSCP+CR
Sbjct: 149 CAVCKDQFVVDVEAKRLPCNHIYHSDCILPWLSQQNSCPLCR 190
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D+DQP+ G T ++ S+ ++ C+VC+ + + +++PC H +H CI
Sbjct: 592 DEDQPQ---GLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCI 648
Query: 100 STWISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 649 DRWLSENSTCPICRRAVL 666
>gi|410217810|gb|JAA06124.1| ring finger protein 103 [Pan troglodytes]
gi|410248724|gb|JAA12329.1| ring finger protein 103 [Pan troglodytes]
gi|410339457|gb|JAA38675.1| ring finger protein 103 [Pan troglodytes]
Length = 685
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCT---VCMENFLQAFP 84
EA + S T P + + +S+ +E T A RCT VC+ENF
Sbjct: 574 EACSCANKYSQTSPYERKGRSYGSYNTNEDMEPDWLTWPADMLRCTECVVCLENFENGCL 633
Query: 85 GKQVPCGHVFHATCISTWISLS-NSCPVCR 113
+PCGHVFH CI W++ + CPVCR
Sbjct: 634 LMGLPCGHVFHQNCIVMWLTGGRHCCPVCR 663
>gi|388506224|gb|AFK41178.1| unknown [Medicago truncatula]
Length = 313
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ VS LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 207 SKEVVSKLPVITLTEEILSKMGKDAECAICRENLVLNDQMQELPCKHTFHPPCLKPWLDE 266
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 267 HNSCPICR 274
>gi|357493779|ref|XP_003617178.1| Thioredoxin-related protein [Medicago truncatula]
gi|355518513|gb|AET00137.1| Thioredoxin-related protein [Medicago truncatula]
Length = 325
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 180 SIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPV 239
Query: 112 CR 113
CR
Sbjct: 240 CR 241
>gi|320162896|gb|EFW39795.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 404
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S +SSLPTV A+ G C VC ++F Q+PC H+FH CI W+ + +
Sbjct: 266 SSAALSSLPTVLMTAELLASSGDCAVCKDSFSLDEGVLQLPCHHLFHNNCILPWLKQNGT 325
Query: 109 CPVCRSGV 116
CPVCR V
Sbjct: 326 CPVCRKAV 333
>gi|388517007|gb|AFK46565.1| unknown [Medicago truncatula]
Length = 325
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 180 SIDAMPTIRITQAHLRSDSPCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPV 239
Query: 112 CR 113
CR
Sbjct: 240 CR 241
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D DQP+ G T ++ S+ ++ C+VC+ + + +++PC H +H CI
Sbjct: 549 DDDQPR---GLTKEQIDNLSMRNFGESDAFKTCSVCITEYAEGNKLRKLPCSHEYHVHCI 605
Query: 100 STWISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 606 DRWLSENSTCPICRRAVL 623
>gi|126323696|ref|XP_001365668.1| PREDICTED: RING finger protein 126-like [Monodelphis domestica]
Length = 313
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPT+ TE C VC +
Sbjct: 188 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTIQVTEEHVGSGLECPVCKD 236
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 237 DYTLGENVRQLPCNHLFHDGCIVPWLEQHDTCPVCRKSL 275
>gi|190898230|gb|ACE97628.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLHTDSHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|325186102|emb|CCA20603.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 315
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ LP ++ T+ C VC ++F A +++PC H FH CI W+ NSCPVC
Sbjct: 230 IEKLPVLSITQEDINTNSECAVCKDDFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPVC 289
Query: 113 R 113
R
Sbjct: 290 R 290
>gi|242067263|ref|XP_002448908.1| hypothetical protein SORBIDRAFT_05g001320 [Sorghum bicolor]
gi|241934751|gb|EES07896.1| hypothetical protein SORBIDRAFT_05g001320 [Sorghum bicolor]
Length = 1013
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC ++ KQ+PC H++HA+CI W+S N+CPVCR
Sbjct: 346 CPVCKDDMPITTVAKQLPCMHLYHASCILPWLSCRNTCPVCR 387
>gi|226704599|sp|A8Y4B2.2|HRD1_CAEBR RecName: Full=E3 ubiquitin-protein ligase hrd-1; AltName:
Full=Suppressor/enhancer of lin-12; Flags: Precursor
Length = 622
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S ++A + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 274 NSQFPVVSNDELSAMDATCIICREEMTVESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
Query: 114 SGV 116
+ +
Sbjct: 334 TDI 336
>gi|395513397|ref|XP_003760912.1| PREDICTED: RING finger protein 126-like [Sarcophilus harrisii]
Length = 362
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPT+ TE C VC +
Sbjct: 236 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTIQVTEEHVGSGLECPVCKD 284
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 285 DYTLGENVRQLPCNHLFHDGCIVPWLEQHDTCPVCRKSL 323
>gi|356501372|ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING1-like [Glycine max]
Length = 335
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC E F +++PC H++H+ CI W+ NSCPV
Sbjct: 181 SIDAMPTIKITQAHLRLDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPV 240
Query: 112 CR 113
CR
Sbjct: 241 CR 242
>gi|218196634|gb|EEC79061.1| hypothetical protein OsI_19629 [Oryza sativa Indica Group]
Length = 137
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C+ F G+ +P CGH FHA C+ W L ++CP+CR+GV+
Sbjct: 50 CAICIAEFADGEEGRLLPRCGHRFHARCVDMWFQLHSTCPLCRAGVL 96
>gi|115469064|ref|NP_001058131.1| Os06g0633500 [Oryza sativa Japonica Group]
gi|113596171|dbj|BAF20045.1| Os06g0633500, partial [Oryza sativa Japonica Group]
Length = 124
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + Q Q+PC H++H CI W+++ NSCPVCR
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCR 91
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 512 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 570
Query: 102 WISLSNSCPVCRSGVIA 118
W+S +++CP+CR V+A
Sbjct: 571 WLSENSTCPICRRAVLA 587
>gi|223974505|gb|ACN31440.1| unknown [Zea mays]
gi|414880882|tpg|DAA58013.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 191
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ SSL E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 130 SFSSLRFATEMERKCSICQEEFETNEEMGRLDCGHSYHVYCIKQWLSQKNICPVCKTAV 188
>gi|116785539|gb|ABK23765.1| unknown [Picea sitchensis]
Length = 325
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V ++PT+ C VC + F +++PC H++H+ CI W++ NSCPV
Sbjct: 160 AVDAMPTIKINSRHLVNNSHCPVCKDRFEVGGEAREMPCKHIYHSDCILPWLAQHNSCPV 219
Query: 112 CRSGV 116
CR G+
Sbjct: 220 CRHGL 224
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CTVC+ NF +++PC H+FH CI W+ ++ CP+CR +
Sbjct: 437 CTVCLNNFEAGESIRKLPCNHLFHPECIYKWLDINKKCPMCREEI 481
>gi|378755319|gb|EHY65346.1| hypothetical protein NERG_01792 [Nematocida sp. 1 ERTm2]
Length = 275
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 44 DQPKSHDGQTNSELTVSSLPTVAA--TEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
+ P SH E +P V+A +EG C +C+ + + +++ C H FH+ C+S
Sbjct: 190 EDPVSHRKTIGKEDLDEKIPEVSADGSEGECPICLVDIEKEEIIRKLHCMHTFHSECVSE 249
Query: 102 WIS-LSNSCPVCRSGVIA 118
W++ SN CP+CR +A
Sbjct: 250 WLTNYSNECPMCRKEAVA 267
>gi|270000781|gb|EEZ97228.1| hypothetical protein TcasGA2_TC011026 [Tribolium castaneum]
Length = 306
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+C+VC E+F +Q+PC H++H CI W+ L +CP+CR ++
Sbjct: 206 QCSVCWEDFQLGENVRQLPCTHIYHEPCIRPWLELHGTCPICRQNLV 252
>gi|190898164|gb|ACE97595.1| thioredoxin-related protein [Populus tremula]
Length = 260
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 150 SIDAMPTVKITQRHLRTDSHCPVCKDKFELRSEARQMPCNHLYHSDCIVPWLVQHNSCPV 209
Query: 112 CR 113
CR
Sbjct: 210 CR 211
>gi|449447197|ref|XP_004141355.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Cucumis
sativus]
gi|449524426|ref|XP_004169224.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Cucumis
sativus]
Length = 313
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C +C ENF +++PC H FH C+ W+ +NSCP+CR
Sbjct: 232 QCAICKENFAVDDKKQELPCKHAFHQDCLKPWLDSNNSCPICR 274
>gi|389603286|ref|XP_001568934.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505794|emb|CAM44067.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 LPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
P+VAA + C +C+++F+ K +PCGH FH C+ +W+ + CP CR V
Sbjct: 293 FPSVAADPTKACGICLDDFVGGESVKSLPCGHTFHGACVRSWLIRAAVCPTCRQPV 348
>gi|91091942|ref|XP_975905.1| PREDICTED: similar to CG11982 CG11982-PA isoform 2 [Tribolium
castaneum]
Length = 295
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+C+VC E+F +Q+PC H++H CI W+ L +CP+CR ++
Sbjct: 195 QCSVCWEDFQLGENVRQLPCTHIYHEPCIRPWLELHGTCPICRQNLV 241
>gi|432852662|ref|XP_004067322.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Oryzias latipes]
Length = 617
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ V++ +AA + C +C + L A +++PCGH+FH +C+ +W+ SCP CR+
Sbjct: 324 ARFAVATAEELAANDDDCAICWDAMLTA---RKLPCGHLFHNSCLRSWLEQDTSCPTCRT 380
Query: 115 GV 116
+
Sbjct: 381 SL 382
>gi|156550430|ref|XP_001600973.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Nasonia
vitripennis]
Length = 148
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 55 SELTVSSLPTVAATEG-----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
S+ V +LP + + +C VC+ +F K +PC H FH CI W+ +NSC
Sbjct: 49 SKDVVKNLPEIEYKDKLDKREQCPVCIRDFETGNTAKALPCEHNFHKECIEPWLEKTNSC 108
Query: 110 PVCRSGVI 117
P+CR ++
Sbjct: 109 PLCRYELL 116
>gi|414591182|tpg|DAA41753.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 170
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 29 ALTMITNTSSTPPDQDQPKSHDGQTNSELTV--SSLPTVAATE-GRCTVCMENFLQAFPG 85
A T + +S PP +D P T V + P + E C VC+ F + G
Sbjct: 73 ASTSLLPAASPPPRRDVPLPSSLSTIPVFFVLHVAAPGLGGGEKAECAVCLAEFGEWEAG 132
Query: 86 KQVP-CGHVFHATCISTWISLSNSCPVCRS 114
+ +P CGH FH CI+TW+ +S +CP+CR+
Sbjct: 133 RLLPRCGHAFHEECIATWLRVSTTCPLCRA 162
>gi|356552445|ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
max]
Length = 313
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 207 SKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDE 266
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 267 HNSCPICR 274
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L + + A + C+VC+ + + +++PC H +H CI
Sbjct: 266 DDDQPRGLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 324
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 325 WLSENSTCPICRRAVL 340
>gi|332017271|gb|EGI58040.1| E3 ubiquitin-protein ligase rnf181 [Acromyrmex echinatior]
Length = 146
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 55 SELTVSSLPTV---AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
S+ V++LP + + +C VC++ F K +PC HVFH CI W+ +NSCP+
Sbjct: 49 SKNAVANLPEIKIESNENKQCPVCLKEFEIGNKAKSMPCQHVFHQECIIPWLEKTNSCPL 108
Query: 112 CR 113
CR
Sbjct: 109 CR 110
>gi|125550960|gb|EAY96669.1| hypothetical protein OsI_18584 [Oryza sativa Indica Group]
Length = 177
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 60 SSLPTVAATEG-RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
SS P AA +C VC+ G+ +P C HVFHA CI TW+++S++CPVCR+ V
Sbjct: 99 SSSPATAADAAVQCAVCLGEMEDGELGRLLPACRHVFHAECIDTWLAVSSTCPVCRAAV 157
>gi|125543691|gb|EAY89830.1| hypothetical protein OsI_11376 [Oryza sativa Indica Group]
Length = 392
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA---ATEGRCTVCMENFLQAFPGKQVPCG 91
N TPP + + V++LPTV A C VC++ F +++PC
Sbjct: 256 NRQGTPPARKE------------AVAALPTVRVHDAAGATCPVCLDEFEAGGEAREMPCK 303
Query: 92 HVFHATCISTWISLSNSCPVCR 113
H FH CI W+ +SCPVCR
Sbjct: 304 HRFHDGCILPWLEAHSSCPVCR 325
>gi|115452763|ref|NP_001049982.1| Os03g0324900 [Oryza sativa Japonica Group]
gi|108707910|gb|ABF95705.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113548453|dbj|BAF11896.1| Os03g0324900 [Oryza sativa Japonica Group]
gi|215686908|dbj|BAG90778.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA---ATEGRCTVCMENFLQAFPGKQVPCG 91
N TPP + + V++LPTV A C VC++ F +++PC
Sbjct: 184 NRQGTPPARKE------------AVAALPTVRVHDAAGATCPVCLDEFEAGGEAREMPCK 231
Query: 92 HVFHATCISTWISLSNSCPVCR 113
H FH CI W+ +SCPVCR
Sbjct: 232 HRFHDGCILPWLEAHSSCPVCR 253
>gi|348501356|ref|XP_003438236.1| PREDICTED: RING finger protein 126-like [Oreochromis niloticus]
Length = 311
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D+++ + +LPT++ TE C VC E++
Sbjct: 191 QLLNQFENTGPPPADRER-------------IKNLPTISITEEHVSAGLECPVCKEDYSV 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 238 DESVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL 272
>gi|320168178|gb|EFW45077.1| synovial apoptosis inhibitor 1 [Capsaspora owczarzaki ATCC 30864]
Length = 802
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E A K++PCGHVFH C+ +W+ +CP CR+ V+
Sbjct: 286 LAAVDNVCIICREEMTAA---KRLPCGHVFHLHCLRSWLERQQTCPTCRAPVL 335
>gi|357143602|ref|XP_003572979.1| PREDICTED: RING-H2 finger protein ATL3-like [Brachypodium
distachyon]
Length = 148
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 33 ITNTSSTPPDQDQPKSHDGQTNSELTVSSLP-------TVAATEG---RCTVCMENFLQA 82
++ QD ++ G T E V LP +AA EG C VC+E
Sbjct: 39 LSRVRVGEGGQDAEEAGAGLTEEE--VGELPCHDFKPDQLAAGEGGAGECAVCLEALRDG 96
Query: 83 FPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVIA 118
+P CGH FHA C+ +W+ S CPVCR+ V+A
Sbjct: 97 ERCAVLPRCGHGFHAECVGSWLRKSRLCPVCRAEVVA 133
>gi|388511895|gb|AFK44009.1| unknown [Lotus japonicus]
Length = 293
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ +LPT+ ++ C +C E F +Q+PC H++H CI W+ NS
Sbjct: 163 SRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNS 222
Query: 109 CPVCR 113
CPVCR
Sbjct: 223 CPVCR 227
>gi|356552447|ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
max]
Length = 313
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 207 SKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDE 266
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 267 HNSCPICR 274
>gi|452820981|gb|EME28017.1| zinc finger (C3HC4-type RING finger) family protein isoform 1
[Galdieria sulphuraria]
Length = 160
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ + L T+ TE C VC ++F KQ+PC H++H+ CI +W NS
Sbjct: 68 SKKAIEELRTLQLTEDIPSDNSVCVVCADSFQPGDEAKQLPCQHLYHSACILSWFRQHNS 127
Query: 109 CPVCR 113
CP+CR
Sbjct: 128 CPLCR 132
>gi|356563972|ref|XP_003550231.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
max]
Length = 308
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 202 SKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDE 261
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 262 HNSCPICR 269
>gi|268557176|ref|XP_002636577.1| C. briggsae CBR-HRD-1 protein [Caenorhabditis briggsae]
Length = 595
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
NS+ V S ++A + C +C E K++PC HVFHA C+ +W +CP CR
Sbjct: 274 NSQFPVVSNDELSAMDATCIICREEMTVESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
Query: 114 SGV 116
+ +
Sbjct: 334 TDI 336
>gi|413944251|gb|AFW76900.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 172
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 34 TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTV-------AATEGR---CTVCMENFLQAF 83
+ SS + + DG+ L+ L T+ AA +G C VC+E F
Sbjct: 40 SRGSSQHAANQEERVEDGRGRRGLSSGELATLPCHEYFKAAADGETGDCAVCLEAFEAGD 99
Query: 84 PGKQVP-CGHVFHATCISTWISLSNSCPVCR 113
+Q+P C H FHA C+ +W+ S++CPVCR
Sbjct: 100 RCRQLPRCEHSFHAECVDSWLRKSSACPVCR 130
>gi|403363936|gb|EJY81717.1| zinc finger protein [Oxytricha trifallax]
Length = 345
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 26 LDEALTMITN---TSSTPPDQDQ--PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFL 80
L++ L M S TPP + H+ Q + +L + + + RCT+C E+ +
Sbjct: 208 LEQILRMSMQDRGRSGTPPASEHAIKNLHEVQISEKLCKKNEKDGSLEQPRCTICCEDLV 267
Query: 81 QAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+PCGH+F+ CIS W+ N CPVCR
Sbjct: 268 DK--ATMLPCGHMFNKECISEWLHQHNQCPVCR 298
>gi|356575409|ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
Length = 337
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVA-ATEGR---CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S+ + +LPTV A+E C +C + K++PCGH +H CI W+S NSCP
Sbjct: 238 SKAALEALPTVKIASESEAVACAICKDLLGVGDAAKRLPCGHRYHGDCIVPWLSSRNSCP 297
Query: 111 VCR 113
VCR
Sbjct: 298 VCR 300
>gi|356563970|ref|XP_003550230.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
max]
Length = 313
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 207 SKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDE 266
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 267 HNSCPICR 274
>gi|255637845|gb|ACU19242.1| unknown [Glycine max]
Length = 313
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V++LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 207 SKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDE 266
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 267 HNSCPICR 274
>gi|258565557|ref|XP_002583523.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907224|gb|EEP81625.1| predicted protein [Uncinocarpus reesii 1704]
Length = 298
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 55 SELTVSSLP------TVAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
+E + +LP T+ +G+ C++CM+N A ++PC H FH TCIS W+
Sbjct: 147 TEAAIRALPKKPVDKTMLGHDGKAECSICMDNVEIAEKVTELPCKHWFHGTCISAWLIEH 206
Query: 107 NSCPVCRSGVI 117
++CP CR G++
Sbjct: 207 DTCPHCRRGIM 217
>gi|168041749|ref|XP_001773353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675395|gb|EDQ61891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 74
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 55 SELTVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSN 107
S+ V ++PT+ ++ +C VC + F +Q+PC H++HA CI W++ N
Sbjct: 6 SKSAVEAMPTIQISQEHLGTDAAQCAVCKDEFELGASVRQMPCRHMYHADCILPWLAQHN 65
Query: 108 SCPVCR 113
SCPVCR
Sbjct: 66 SCPVCR 71
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCI 99
D DQP+ G T ++ ++ ++ C+VC+ + + +++PC H +H CI
Sbjct: 535 DDDQPR---GLTKEQIDNLAMRNFGESDAFKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 591
Query: 100 STWISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 592 DRWLSENSTCPICRRAVL 609
>gi|294462410|gb|ADE76753.1| unknown [Picea sitchensis]
Length = 354
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VC E F +++PC H++H+ CI W++ N+CP+CR G+
Sbjct: 172 CPVCKERFEVGGEAREMPCKHIYHSDCILPWLAQHNTCPICRQGL 216
>gi|340376446|ref|XP_003386743.1| PREDICTED: e3 ubiquitin-protein ligase RNF115-like [Amphimedon
queenslandica]
Length = 250
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 56 ELTVSSLPTVAAT------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
E + LPT T E C++C E F+ K++PC H+FH+ CI W+ L +C
Sbjct: 177 ETKIMQLPTSNITQEQVNGESECSICKETFVLNDEYKELPCTHIFHSHCIVAWLKLRGTC 236
Query: 110 PVCRSGV 116
P CR +
Sbjct: 237 PTCRYNL 243
>gi|449447199|ref|XP_004141356.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Cucumis
sativus]
gi|449524428|ref|XP_004169225.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Cucumis
sativus]
Length = 307
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+C +C ENF +++PC H FH C+ W+ +NSCP+CR
Sbjct: 226 QCAICKENFAVDDKKQELPCKHAFHQDCLKPWLDSNNSCPICR 268
>gi|389748069|gb|EIM89247.1| hypothetical protein STEHIDRAFT_119941 [Stereum hirsutum FP-91666
SS1]
Length = 1519
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 50 DGQTNSELTVSSLPTVAATEGRCTVCMENFLQA-FPGKQVPCGHVFHATCISTWISLSNS 108
DG+ +L + +P RCT+CM F + G C H FH TC+S W++ + +
Sbjct: 1456 DGRVKLKLELLGVPV-----DRCTICMTQFRDGEYAGLGTGCKHAFHETCLSRWLARNRT 1510
Query: 109 CPVCR 113
CPVCR
Sbjct: 1511 CPVCR 1515
>gi|356536435|ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
max]
gi|356536437|ref|XP_003536744.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 2 [Glycine
max]
Length = 333
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVA-ATEGR---CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S+ V +LPTV A+E C +C + K++PCGH +H CI W+S NSCP
Sbjct: 241 SKAAVEALPTVKIASESEAVACAICKDLLGVGDLAKRLPCGHGYHGDCIVPWLSSRNSCP 300
Query: 111 VCR 113
VCR
Sbjct: 301 VCR 303
>gi|313233477|emb|CBY09649.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 59 VSSLPTV----AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ LPT A TE C VCM++ Q +++PC H+ H+ CI W+ +N CP C+
Sbjct: 152 IEQLPTQKLREAFTEYNCPVCMDDLAQEDQVRRLPCLHILHSDCIDPWLKDNNECPTCKF 211
Query: 115 GV 116
+
Sbjct: 212 DI 213
>gi|149032467|gb|EDL87358.1| rCG39047 [Rattus norvegicus]
Length = 548
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATAEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|449680832|ref|XP_002156770.2| PREDICTED: RING finger protein 150-like [Hydra magnipapillata]
Length = 362
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 59 VSSLPTVAAT---EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSG 115
+ +LP AAT + C VC+E++ +++PC H+FH +CI W+ +CP+C+S
Sbjct: 226 LKTLPFSAATHEEDDTCAVCLESYKDGETLRELPCIHLFHKSCIDPWLLYHRTCPMCKSN 285
Query: 116 VIA 118
++
Sbjct: 286 ILK 288
>gi|351715177|gb|EHB18096.1| E3 ubiquitin-protein ligase RLIM [Heterocephalus glaber]
Length = 466
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D +QP+ + LT+ S A + C++C+ ++ + +++PC H +H CI
Sbjct: 384 DDEQPRGFTKEQIDNLTMRSFGENDALKT-CSICIRDYTEDNKLRKLPCSHEYHPHCIDR 442
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 443 WLSENSTCPICRRTVL 458
>gi|237830951|ref|XP_002364773.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|211962437|gb|EEA97632.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|221507652|gb|EEE33256.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 1542
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
RC++C E++ A +++PC HVFH CI W+ S CP+C+
Sbjct: 1492 RCSICFEDYEHADELRRLPCTHVFHKNCIDVWLRRSFVCPICK 1534
>gi|17509463|ref|NP_493231.1| Protein TOE-4 [Caenorhabditis elegans]
gi|3880441|emb|CAB04890.1| Protein TOE-4 [Caenorhabditis elegans]
Length = 489
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 51 GQTNSELTVSSLPTVAAT-------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI 103
G + E+ ++PTV A E CTVC+ +F +++ C HVFH CI W+
Sbjct: 405 GASKVEIDTFTIPTVYAKKTDGEEDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWL 464
Query: 104 SLSNSCPVCRSGV 116
++ CP+CR +
Sbjct: 465 DINKRCPMCREEI 477
>gi|308487104|ref|XP_003105748.1| hypothetical protein CRE_17899 [Caenorhabditis remanei]
gi|308255204|gb|EFO99156.1| hypothetical protein CRE_17899 [Caenorhabditis remanei]
Length = 478
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
P + DG T+ + P A+ +G C++C E+ Q+ + CGH++H CIS WI+
Sbjct: 2 PSASDG------TLDAPP--ASLQGSCSICFEDLRQSDKISAIVCGHIYHHGCISQWIAA 53
Query: 106 SNSCPVCRSGV 116
CP CR V
Sbjct: 54 KRQCPSCRRTV 64
>gi|255582119|ref|XP_002531854.1| zinc finger protein, putative [Ricinus communis]
gi|223528504|gb|EEF30532.1| zinc finger protein, putative [Ricinus communis]
Length = 161
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATE----GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S+ +V ++P + TE C +C+++ +++PC H FH+ CI W+++ SCP
Sbjct: 71 SKESVDAMPRIIVTEDCRVKECAICLDDVGIGSEVREMPCNHRFHSACIENWLAVHGSCP 130
Query: 111 VCR 113
VCR
Sbjct: 131 VCR 133
>gi|55742350|ref|NP_001006735.1| RING finger protein 126 [Xenopus (Silurana) tropicalis]
gi|76363368|sp|Q6DIP3.1|RN126_XENTR RecName: Full=RING finger protein 126
gi|49522450|gb|AAH75492.1| ring finger protein 126 [Xenopus (Silurana) tropicalis]
Length = 311
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D K + +LPT+ TE C VC E
Sbjct: 184 LDTIITQLLNQFENTGPPPADTEK-----------IQALPTIQITEEHVGSGLECPVCKE 232
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 233 DYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 30/61 (49%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSG 115
EL L V G C +C+E F + +PC H FH CI W+ L+ CP CRS
Sbjct: 219 ELPKFRLKAVPDDCGECLICLEEFQIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRSS 278
Query: 116 V 116
V
Sbjct: 279 V 279
>gi|300708127|ref|XP_002996250.1| hypothetical protein NCER_100687 [Nosema ceranae BRL01]
gi|239605534|gb|EEQ82579.1| hypothetical protein NCER_100687 [Nosema ceranae BRL01]
Length = 208
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWI-SLSNSCPVCRSGVI 117
CT+CM F + +PC H FH+ C+ W+ S SN+CPVCR ++
Sbjct: 162 CTICMNKFKNRELARILPCEHTFHSKCVDKWLTSHSNTCPVCRKELV 208
>gi|432915988|ref|XP_004079240.1| PREDICTED: RING finger protein 126-like [Oryzias latipes]
Length = 311
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCMENFLQ 81
+ L NT P D+++ + SLPT++ T+ C VC E++
Sbjct: 191 QLLNQFENTGPPPADRER-------------IKSLPTISITQEHISAGLECPVCKEDYSI 237
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 238 DERVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL 272
>gi|312372026|gb|EFR20078.1| hypothetical protein AND_20693 [Anopheles darlingi]
Length = 1264
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
++ +PTVA +E + C+VC E+F +++PC HV+H CI W+ L +CP C
Sbjct: 1059 IAEIPTVAISEKQVEMKLQCSVCFEDFQVGESVRKLPCLHVYHEPCIIPWLELHGTCPSC 1118
Query: 113 RSGV 116
R +
Sbjct: 1119 RKSL 1122
>gi|307175837|gb|EFN65652.1| RING finger protein 181 [Camponotus floridanus]
Length = 146
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 59 VSSLPTVA---ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +LP + + +C VC++ F K +PC HVFH CI W+ +NSCP+CR
Sbjct: 53 VETLPEIKIEPSETKQCPVCLKEFEVNDKAKSMPCHHVFHQECILPWLEKTNSCPLCR 110
>gi|224139648|ref|XP_002323210.1| predicted protein [Populus trichocarpa]
gi|222867840|gb|EEF04971.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 166 SIDAMPTIKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPV 225
Query: 112 CR 113
CR
Sbjct: 226 CR 227
>gi|169806174|ref|XP_001827832.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
gi|161779280|gb|EDQ31303.1| zinc finger, C3HC4 type [Enterocytozoon bieneusi H348]
Length = 247
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
LT S+ + RCT+C +++ K +PC H FH+ CI W ++ +SCP+C+ +
Sbjct: 174 LTYKSIAELPDENDRCTICYDDYKVGTGIKILPCNHHFHSECIDEWFNVKDSCPLCKKSI 233
>gi|449016625|dbj|BAM80027.1| similar to ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 285
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 33/46 (71%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C++C++ F++ +++ CGH+FH+ CIS W+ +N CP+C+ ++
Sbjct: 157 CSICLDPFMKGDMSRKLSCGHLFHSHCISKWVQRANRCPLCQHEIV 202
>gi|440493524|gb|ELQ75983.1| putative E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 252
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 19 IIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMEN 78
IIDE F M T S++P K+ L VS A +G+C +C+
Sbjct: 172 IIDEIF-------MSTKVSTSPVSNKYIKA--------LQVSH----ARQKGKCMICLST 212
Query: 79 FLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ + G ++ C H FH +C W+ + N+CP+CR +
Sbjct: 213 YRKGECGIELSCAHFFHKSCGVKWMKMQNTCPICRHEI 250
>gi|297832534|ref|XP_002884149.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp.
lyrata]
gi|297329989|gb|EFH60408.1| hypothetical protein ARALYDRAFT_900256 [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
+ S T E C VC + F Q + +P CGHVFH C+ TW+ S++CP+CR+
Sbjct: 94 QFKFSEPTTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKSSTCPICRA 153
Query: 115 GV 116
V
Sbjct: 154 RV 155
>gi|51371918|dbj|BAD29097.2| unknown protein [Oryza sativa Japonica Group]
Length = 136
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 47 KSHDGQTNSELTVSSLPTVAATEGR--CTVCMENFLQAFPGKQV---PCGHVFHATCIST 101
+S+ G N + S P TE CT+C+E FL G+QV PC H+FH CI+
Sbjct: 19 ESNRGGRNHAKSARSKPAPNNTEEEKACTICLETFL---AGEQVVATPCNHIFHQECITP 75
Query: 102 WISLSNSCPVCR 113
W+ +CPVCR
Sbjct: 76 WVKGHGNCPVCR 87
>gi|222624843|gb|EEE58975.1| hypothetical protein OsJ_10676 [Oryza sativa Japonica Group]
Length = 364
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 59 VSSLPTVA---ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V++LPTV A C VC++ F +++PC H FH CI W+ +SCPVCR
Sbjct: 240 VAALPTVRVHDAAGATCPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAHSSCPVCR 297
>gi|156407061|ref|XP_001641363.1| predicted protein [Nematostella vectensis]
gi|156228501|gb|EDO49300.1| predicted protein [Nematostella vectensis]
Length = 149
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
CT+C+E+F+ CGH +H CI W+ + NSCP+C+ G+
Sbjct: 84 CTICLEDFINKEEVNMCKCGHAYHNKCIMKWLEVRNSCPICQRGL 128
>gi|66806747|ref|XP_637096.1| hypothetical protein DDB_G0287847 [Dictyostelium discoideum AX4]
gi|60465485|gb|EAL63570.1| hypothetical protein DDB_G0287847 [Dictyostelium discoideum AX4]
Length = 688
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C VC E+ GK++PCGH+ H C+ +W+ +CP+CR+ VI
Sbjct: 266 CIVCREDMTS---GKKLPCGHILHLHCLRSWLERQQTCPICRALVI 308
>gi|326487223|dbj|BAJ89596.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TE RC++C E+F + ++ CGH +H CI W+S N+CP+C+
Sbjct: 289 TERRCSICQEDFEASEEVGRLSCGHGYHVHCIKQWLSRKNACPLCK 334
>gi|291243917|ref|XP_002741845.1| PREDICTED: ring finger protein 181-like [Saccoglossus kowalevskii]
Length = 160
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 58 TVSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V +LP++ + +C VC+ F KQ+PC H FH+ CI W+ +NSCPV
Sbjct: 63 VVQALPSIEISAKQVQMGKKCPVCLLEFDIHEKAKQLPCQHQFHSGCILPWLKKTNSCPV 122
Query: 112 CRSGVI 117
CR ++
Sbjct: 123 CRHELL 128
>gi|224089895|ref|XP_002308856.1| predicted protein [Populus trichocarpa]
gi|222854832|gb|EEE92379.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PT+ T+ C VC + F +Q+PC H++H+ CI W+ NSCPV
Sbjct: 169 SIDAMPTIKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPV 228
Query: 112 CR 113
CR
Sbjct: 229 CR 230
>gi|326502788|dbj|BAJ99022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TE RC++C E+F + ++ CGH +H CI W+S N+CP+C+
Sbjct: 289 TERRCSICQEDFEASEEVGRLSCGHGYHVHCIKQWLSRKNACPLCK 334
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 61 SLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
S T T +C VCM ++ +++PC H FH+ CI W+ + +CPVCR V
Sbjct: 297 STGTAKETNSKCVVCMSEYVNREKLRRLPCTHDFHSKCIDKWLRSNRTCPVCRDDV 352
>gi|358337342|dbj|GAA55711.1| E3 ubiquitin-protein ligase RNF12-B [Clonorchis sinensis]
Length = 483
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +C+ + + +PCGH FH CI W + S++CP CR+GV
Sbjct: 254 CEICLTEYRNKDQLRHLPCGHAFHKKCIDAWFNESSTCPKCRAGV 298
>gi|229564318|sp|Q7ZW78.2|RN181_DANRE RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
Length = 156
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTV-----AATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V SLP V A +G +C VC+ F + +++PC H+FH CI W++ +NSCP+
Sbjct: 59 VVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPL 118
Query: 112 CR 113
CR
Sbjct: 119 CR 120
>gi|89272868|emb|CAJ81894.1| ring finger protein 126 [Xenopus (Silurana) tropicalis]
Length = 350
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D K + +LPT+ TE C VC E
Sbjct: 223 LDTIITQLLNQFENTGPPPADTEK-----------IQALPTIQITEEHVGSGLECPVCKE 271
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 272 DYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 310
>gi|159486497|ref|XP_001701276.1| hypothetical protein CHLREDRAFT_122373 [Chlamydomonas reinhardtii]
gi|158271858|gb|EDO97669.1| predicted protein [Chlamydomonas reinhardtii]
Length = 336
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 30 LTMITNTSSTPPDQDQPKSHDGQTNSELT--VSSLPTVAATE-----GRCTVCMENFLQA 82
L ++ + ST + + + HD ++T + P A + G C +C E +A
Sbjct: 244 LHLVRDLYSTFRNF-RSRMHDFLRFRQVTARLDRFPDAGADDLRRCDGVCIICREEMAEA 302
Query: 83 FPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
K++ CGHVFH C+ +W+ +CP CR+ V
Sbjct: 303 GSNKRLFCGHVFHLHCLRSWLERQQNCPTCRASV 336
>gi|410924407|ref|XP_003975673.1| PREDICTED: RING finger protein 126-like [Takifugu rubripes]
Length = 311
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCME 77
LD +T + N ++ PP D+ + + SLP ++ TE C VC E
Sbjct: 185 LDAIITQLLNQFENTGPPPADKER-----------IKSLPIISITEEHVGAGLECPVCKE 233
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 234 DYSVEESVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL 272
>gi|242046404|ref|XP_002461073.1| hypothetical protein SORBIDRAFT_02g040220 [Sorghum bicolor]
gi|241924450|gb|EER97594.1| hypothetical protein SORBIDRAFT_02g040220 [Sorghum bicolor]
Length = 201
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
C +C++ A GK++PCGH FH C+ W+ + +CPVCR
Sbjct: 94 CAICLDGVEDA--GKEMPCGHRFHGGCLERWLGVHGNCPVCRR 134
>gi|296084225|emb|CBI24613.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 69 EGRCTVCMENFL-QAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
E CT+C+E + + G+ CGH +H CI W+S+ NSCP+C++ +A
Sbjct: 65 EAMCTICLEEYKSKEEVGRMKNCGHEYHVGCIRKWLSMKNSCPICKAPALA 115
>gi|294931463|ref|XP_002779887.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239889605|gb|EER11682.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 247
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWIS 104
P S D + +EL + +L + C +C E Q K++P CGHVFH CI W+
Sbjct: 153 PASRDAR--NELRMVTLEE----DELCVMCQEEMKQGSKAKKMPECGHVFHDHCIMEWLE 206
Query: 105 LSNSCPVCRS 114
N+CP+CR+
Sbjct: 207 RHNTCPLCRN 216
>gi|84994748|ref|XP_952096.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302257|emb|CAI74364.1| hypothetical protein, conserved [Theileria annulata]
Length = 296
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+E + Q +++PC H FH CI TW+ S CP+C+ I
Sbjct: 246 CSVCLEEYQQGDEIRRLPCTHSFHKRCIDTWLKKSTICPICKFNYI 291
>gi|41053491|ref|NP_956600.1| E3 ubiquitin-protein ligase RNF181 [Danio rerio]
gi|29477113|gb|AAH50161.1| Ring finger protein 181 [Danio rerio]
Length = 156
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTV-----AATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V SLP V A +G +C VC+ F + +++PC H+FH CI W++ +NSCP+
Sbjct: 59 VVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPL 118
Query: 112 CR 113
CR
Sbjct: 119 CR 120
>gi|384250868|gb|EIE24347.1| hypothetical protein COCSUDRAFT_23409 [Coccomyxa subellipsoidea
C-169]
Length = 136
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 55 SELTVSSLPTV-------AATE-----GRCTVCMENFLQAFPGKQVP-CGHVFHATCIST 101
SE + SLPT AAT G C +C+E F + +++P C HVFH C+
Sbjct: 53 SEEVMESLPTAKVAWQDGAATVTGRQVGECAICLEGFARGEKVRELPQCCHVFHQACVDR 112
Query: 102 WISLSNSCPVCRSGV 116
W+ + N+CP+CR+ +
Sbjct: 113 WLRMHNACPLCRTAL 127
>gi|348516176|ref|XP_003445615.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Oreochromis
niloticus]
Length = 172
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 57 LTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
LTV + A G +C VC+ F + +++PC H+FH+ CI W+ +NSCP+CR
Sbjct: 79 LTVIVITAEQAGRGLKCPVCLLEFEEQQTAREMPCKHLFHSGCILPWLDKTNSCPLCR 136
>gi|401418343|ref|XP_003873663.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489894|emb|CBZ25155.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 478
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A + RCT+C E+ + K++PCGH +H C+ W+ ++CP CR+ ++
Sbjct: 284 ARDVRCTICYEDMVPGGGTKRLPCGHCYHIDCLERWLEGHSTCPYCRANIM 334
>gi|224286175|gb|ACN40798.1| unknown [Picea sitchensis]
Length = 282
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAAT----EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S +V +L V + +C VC + F K++PC H++HA CI W++ NSCP
Sbjct: 127 SRASVDALENVKVSGKDAAAQCAVCKDEFEPGKYAKRMPCNHMYHADCILPWLAQHNSCP 186
Query: 111 VCR 113
VCR
Sbjct: 187 VCR 189
>gi|115453039|ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group]
gi|108708145|gb|ABF95940.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113548591|dbj|BAF12034.1| Os03g0351800 [Oryza sativa Japonica Group]
gi|125586254|gb|EAZ26918.1| hypothetical protein OsJ_10846 [Oryza sativa Japonica Group]
gi|215697791|dbj|BAG91984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
++ ++PTV T+ C VC + F +++PC H++H+ CI W+ NSCPV
Sbjct: 167 SIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPV 226
Query: 112 CR 113
CR
Sbjct: 227 CR 228
>gi|403309088|ref|XP_003944962.1| PREDICTED: uncharacterized protein LOC101050334 [Saimiri boliviensis
boliviensis]
Length = 1463
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D+ K + +LPTV TE C VC +
Sbjct: 1338 LDAIITQLLNQFENTGPPPADKEK-----------IQALPTVPVTEEHVGSGLECPVCKD 1386
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ +SCPVCR +
Sbjct: 1387 DYSLGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 1425
>gi|294868132|ref|XP_002765397.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239865416|gb|EEQ98114.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 251
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWIS 104
P S D + +EL + +L + C +C E Q K++P CGHVFH CI W+
Sbjct: 157 PASRDAR--NELRMVTLKE----DELCVMCQEEMKQGSKAKKMPECGHVFHDHCIMEWLE 210
Query: 105 LSNSCPVCRS 114
N+CP+CR+
Sbjct: 211 RHNTCPLCRN 220
>gi|321464459|gb|EFX75467.1| hypothetical protein DAPPUDRAFT_306803 [Daphnia pulex]
Length = 568
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+A T+ C +C E + K++PC H+FHATC+ +W +CP CR V+
Sbjct: 283 LANTDTVCIICREEMVTG--AKKLPCNHIFHATCLRSWFQRQQTCPTCRLEVL 333
>gi|328772613|gb|EGF82651.1| hypothetical protein BATDEDRAFT_86130 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
E C VC E + ++PC HVFH CI++W+ L+ +CPVCR ++
Sbjct: 317 EDECCVCQEGYKHDEITIELPCKHVFHPLCITSWLKLNGTCPVCRYSLV 365
>gi|294868130|ref|XP_002765396.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239865415|gb|EEQ98113.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 247
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWIS 104
P S D + +EL + +L + C +C E Q K++P CGHVFH CI W+
Sbjct: 153 PASRDAR--NELRMVTLKE----DELCVMCQEEMKQGSKAKKMPECGHVFHDHCIMEWLE 206
Query: 105 LSNSCPVCRS 114
N+CP+CR+
Sbjct: 207 RHNTCPLCRN 216
>gi|30697639|ref|NP_176985.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|38454118|gb|AAR20753.1| At1g68180 [Arabidopsis thaliana]
gi|60543341|gb|AAX22268.1| At1g68180 [Arabidopsis thaliana]
gi|70905059|gb|AAZ14055.1| At1g68180 [Arabidopsis thaliana]
gi|332196639|gb|AEE34760.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 248
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
E C +C E F GK++ C H++H++CI +W+++ N+CP+CR V
Sbjct: 133 VKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>gi|294931465|ref|XP_002779888.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239889606|gb|EER11683.1| RING finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 251
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWIS 104
P S D + +EL + +L + C +C E Q K++P CGHVFH CI W+
Sbjct: 157 PASRDAR--NELRMVTLEE----DELCVMCQEEMKQGSKAKKMPECGHVFHDHCIMEWLE 210
Query: 105 LSNSCPVCRS 114
N+CP+CR+
Sbjct: 211 RHNTCPLCRN 220
>gi|359481452|ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 269
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PT+ T+ C VC + F +++PC H++H+ CI W+ NS
Sbjct: 117 SRSSIDAMPTIKITQKHLRSDSHCPVCKDRFELGSEARKMPCNHIYHSDCIVPWLVQHNS 176
Query: 109 CPVCR 113
CPVCR
Sbjct: 177 CPVCR 181
>gi|431914382|gb|ELK15639.1| E3 ubiquitin-protein ligase Praja1 [Pteropus alecto]
Length = 577
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++S+LP + TE C +C +++ ++PC H FH C+S W+ S
Sbjct: 504 SKESISTLPEILVTEDHSAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 563
Query: 107 NSCPVCR 113
+CPVCR
Sbjct: 564 GTCPVCR 570
>gi|15228830|ref|NP_191828.1| RING-H2 finger protein ATL5 [Arabidopsis thaliana]
gi|68565315|sp|Q9LZJ6.1|ATL5_ARATH RecName: Full=RING-H2 finger protein ATL5
gi|7362749|emb|CAB83119.1| RING-H2 zinc finger protein ATL5 [Arabidopsis thaliana]
gi|32189289|gb|AAP75799.1| At3g62690 [Arabidopsis thaliana]
gi|110736661|dbj|BAF00294.1| RING-H2 zinc finger protein ATL5 [Arabidopsis thaliana]
gi|332646859|gb|AEE80380.1| RING-H2 finger protein ATL5 [Arabidopsis thaliana]
Length = 257
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSG 115
+ V S+ T + C+VC+ F + G+ +P CGHVFH CI TW +SCP+CR+
Sbjct: 98 IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157
Query: 116 V 116
V
Sbjct: 158 V 158
>gi|356577672|ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max]
gi|356577674|ref|XP_003556949.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Glycine max]
Length = 309
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PT+ ++ C VC + F +Q+PC H++H+ CI W+ NS
Sbjct: 163 SRSSIDAMPTIKIVQRHLRSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNS 222
Query: 109 CPVCR 113
CPVCR
Sbjct: 223 CPVCR 227
>gi|339244417|ref|XP_003378134.1| zinc finger protein 364 [Trichinella spiralis]
gi|316972979|gb|EFV56621.1| zinc finger protein 364 [Trichinella spiralis]
Length = 281
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E F + + +PC H FH CI W+ L N+CPVCR +
Sbjct: 205 QCSVCFEEFEEGDVCRLLPCSHRFHGDCIVPWLQLHNTCPVCRKRI 250
>gi|301117968|ref|XP_002906712.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108061|gb|EEY66113.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 266
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHA 96
Q+ P H ++ V LP V T+G C VC + F ++PC H FH
Sbjct: 170 QNDPNRHGAPPAAKEVVDKLPKVKITQGEVDGSAECPVCKDFFAVDDEVHRLPCEHSFHP 229
Query: 97 TCISTWISLSNSCPVCR 113
CI W+ NSCP+CR
Sbjct: 230 DCILPWLKQHNSCPLCR 246
>gi|189234248|ref|XP_973806.2| PREDICTED: similar to RING finger protein 181 [Tribolium castaneum]
gi|270002614|gb|EEZ99061.1| hypothetical protein TcasGA2_TC004936 [Tribolium castaneum]
Length = 144
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLP--TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ V +LP T+ +C VC++ + K++PC H FHA CI W++ +NSCP+C
Sbjct: 48 SKSVVENLPSITINGQGVKCPVCLKEHSEGETVKKMPCNHTFHAECILPWLAKTNSCPLC 107
Query: 113 R 113
R
Sbjct: 108 R 108
>gi|215686744|dbj|BAG89594.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 153
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
SS E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 94 SSFRYSTEMEKKCSICQEEFEANEEMGRLDCGHSYHVYCIKQWLSQKNVCPVCKTAV 150
>gi|145500640|ref|XP_001436303.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403442|emb|CAK68906.1| unnamed protein product [Paramecium tetraurelia]
Length = 364
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCG--HVFHATCISTWISLSNSCPVCRSG 115
++ SL A E C +CM + + +PC H FH+TC+ +W+ +++ CP+CRS
Sbjct: 296 SMYSLQETAEGENECAICMNQYEEKDKIAILPCSNKHRFHSTCVRSWLEINSKCPLCRSD 355
Query: 116 V 116
V
Sbjct: 356 V 356
>gi|348665894|gb|EGZ05722.1| hypothetical protein PHYSODRAFT_356170 [Phytophthora sojae]
Length = 191
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 47 KSHDGQTNSELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATC 98
+ H+G T + + LP VA TEG CTVC+ F + +PC H FH C
Sbjct: 114 RRHEGATPQQ--IQQLPVVAVTEGMLQASENASCTVCLSTFELGGCVRMMPCFHRFHPEC 171
Query: 99 ISTWISLSNSCPVCRSGVIA 118
I W+ CP+C+ IA
Sbjct: 172 IDPWLQEKALCPICKFPAIA 191
>gi|307136477|gb|ADN34278.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 409
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + F +++PCGH +H CI W+++ N+CPVCR
Sbjct: 332 CAVCKDKFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCR 373
>gi|403340358|gb|EJY69462.1| RING-finger-containing ubiquitin ligase [Oxytricha trifallax]
Length = 489
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 23 SFNLDEALTMITNTSSTPPDQD-QPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQ 81
+FN D+ T +N ++ +D + KS D +S T + + CT+C+E+F
Sbjct: 386 TFNEDDEETYGSNIDNSKVKKDIESKSADKACSSFET--------SHKDTCTICIESFAD 437
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
K +PC H FH+TCI W+ +CPVC+
Sbjct: 438 EETIKILPCFHQFHSTCIDDWLLRKTNCPVCK 469
>gi|387019649|gb|AFJ51942.1| E3 ubiquitin-protein ligase AMFR-like [Crotalus adamanteus]
Length = 651
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A+ C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 331 GNMEARFAVATPEELASNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 387
Query: 111 VCR 113
CR
Sbjct: 388 TCR 390
>gi|312085499|ref|XP_003144703.1| hypothetical protein LOAG_09127 [Loa loa]
gi|307760134|gb|EFO19368.1| hypothetical protein LOAG_09127 [Loa loa]
Length = 620
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C E K++PC H+FHA C+ +W SCP CR+ ++A
Sbjct: 293 CIICREEMTPVSGAKKLPCNHIFHANCLRSWFQRQQSCPTCRTDILA 339
>gi|195995807|ref|XP_002107772.1| hypothetical protein TRIADDRAFT_18741 [Trichoplax adhaerens]
gi|190588548|gb|EDV28570.1| hypothetical protein TRIADDRAFT_18741, partial [Trichoplax
adhaerens]
Length = 49
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +CM+++ + +++PC H FHA C+ W+ NSCP+CR +
Sbjct: 1 CAICMDDYKKREKIRELPCSHGFHARCVDKWLRQHNSCPICRENI 45
>gi|213404144|ref|XP_002172844.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
gi|212000891|gb|EEB06551.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
Length = 492
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 56 ELTVSSLP-TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+L V +P + E CTVC+ENF ++PC H FH CI W+ ++ +C VCR+
Sbjct: 348 QLPVEKVPQNLVDEEYECTVCLENFKTGDDVVRLPCKHYFHEQCIKPWLRVNGTCAVCRA 407
Query: 115 GV 116
V
Sbjct: 408 PV 409
>gi|194700452|gb|ACF84310.1| unknown [Zea mays]
gi|413954730|gb|AFW87379.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 298
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 51 GQTNSELTVSSLPTVAATEGR-----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
G + L V V A G C VC E Q +PCGH +H CI W+++
Sbjct: 198 GAPPAALAVVERLQVVAVRGEEVVQECAVCKEGMEQGELTTGLPCGHFYHGACIGPWLAI 257
Query: 106 SNSCPVCR 113
N+CPVCR
Sbjct: 258 RNTCPVCR 265
>gi|195060960|ref|XP_001995896.1| GH14198 [Drosophila grimshawi]
gi|193891688|gb|EDV90554.1| GH14198 [Drosophila grimshawi]
Length = 663
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|356575424|ref|XP_003555841.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 298
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 58 TVSSLPTVAATE-------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
V +LPT+ + +C VC + F + Q+PC H +H C+ W+ L NSCP
Sbjct: 158 AVENLPTITVDDELLNSELNQCAVCQDEFEKGSLVTQMPCKHAYHGDCLIPWLRLHNSCP 217
Query: 111 VCR 113
VCR
Sbjct: 218 VCR 220
>gi|395506013|ref|XP_003757330.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Sarcophilus harrisii]
Length = 728
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 406 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 462
Query: 111 VCR 113
CR
Sbjct: 463 TCR 465
>gi|298204570|emb|CBI23845.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+V PT + C VC E + +++PC H++H+ CI W+ + NSCPVCR
Sbjct: 189 SVRLTPTHLRNDPCCPVCKEEYRAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCR 244
>gi|170584566|ref|XP_001897069.1| hypothetical protein [Brugia malayi]
gi|158595540|gb|EDP34085.1| conserved hypothetical protein [Brugia malayi]
Length = 616
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C E K++PC H+FHA C+ +W SCP CR+ ++A
Sbjct: 293 CIICREEMTPVSGAKKLPCNHIFHANCLRSWFQRQQSCPTCRTDILA 339
>gi|115444755|ref|NP_001046157.1| Os02g0191500 [Oryza sativa Japonica Group]
gi|50726403|dbj|BAD34014.1| unknown protein [Oryza sativa Japonica Group]
gi|113535688|dbj|BAF08071.1| Os02g0191500 [Oryza sativa Japonica Group]
gi|125581119|gb|EAZ22050.1| hypothetical protein OsJ_05708 [Oryza sativa Japonica Group]
gi|215693930|dbj|BAG89129.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 375
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 55 SELTVSSLPTVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S+L V SLP +E C VC ++F +PC H FH CI W+++ +CP
Sbjct: 254 SQLVVESLPEATLSEEEASRGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTCP 313
Query: 111 VCRSGV 116
VCR V
Sbjct: 314 VCRHQV 319
>gi|148237398|ref|NP_001079878.1| RING finger protein 126-A [Xenopus laevis]
gi|76363307|sp|Q7T0Q3.1|R126A_XENLA RecName: Full=RING finger protein 126-A
gi|33417148|gb|AAH56088.1| MGC69096 protein [Xenopus laevis]
Length = 312
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 26 LDEALTMITNT--SSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG------RCTVCME 77
LD +T + N ++ PP D K + +LPT+ TE C VC E
Sbjct: 185 LDTIITQLLNQFENTGPPPADNEK-----------IQALPTIQITEEHVGSGLECPVCKE 233
Query: 78 NFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++ +Q+PC H+FH CI W+ ++CPVCR +
Sbjct: 234 DYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>gi|348530058|ref|XP_003452528.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Oreochromis
niloticus]
Length = 297
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+SSLPTV ++ + C VC E + +++PC H FH+ CI W+ L ++CPVC
Sbjct: 205 ISSLPTVCISQEQTDCRLECPVCREEYSLGETVRKLPCLHYFHSECIVPWLELHDTCPVC 264
Query: 113 RSGV 116
R +
Sbjct: 265 RKSL 268
>gi|449481410|ref|XP_004156174.1| PREDICTED: uncharacterized protein LOC101225971 [Cucumis sativus]
Length = 417
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + F +++PCGH +H CI W+++ N+CPVCR
Sbjct: 340 CAVCKDKFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCR 381
>gi|357623756|gb|EHJ74781.1| putative RING finger protein 181 [Danaus plexippus]
Length = 147
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 55 SELTVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+ +V +L V + C +C++ F K++PC H+FH CI TW++ +NSCP C
Sbjct: 51 SKESVKNLKEVKIEDENQNCPICLKKFNINDTAKEMPCHHLFHEKCILTWLNQTNSCPFC 110
Query: 113 RSGV 116
R +
Sbjct: 111 RHEL 114
>gi|356548935|ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
S+ SL + RC +C + + ++PC HV+H CI+ W+S++ CPVC +
Sbjct: 179 SKYKFGSLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNT 238
Query: 115 GVIA 118
V
Sbjct: 239 EVFG 242
>gi|255647446|gb|ACU24187.1| unknown [Glycine max]
Length = 309
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PT+ ++ C VC + F +Q+PC H++H+ CI W+ NS
Sbjct: 163 SRSSIDAMPTIKIVQRHLRSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNS 222
Query: 109 CPVCR 113
CPVCR
Sbjct: 223 CPVCR 227
>gi|147821210|emb|CAN66450.1| hypothetical protein VITISV_043084 [Vitis vinifera]
Length = 366
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENF 79
L+EA+ +T+ T + Q + + +LP+V T C VC E +
Sbjct: 152 LNEAMEELTHNEVTG-ETTQNDRPGPPPAAPSAIEALPSVRLTPTHLRNDPCCPVCKEEY 210
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++H+ CI W+ + NSCPVCR
Sbjct: 211 QAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCR 244
>gi|147788330|emb|CAN63309.1| hypothetical protein VITISV_017174 [Vitis vinifera]
Length = 310
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 59 VSSLPTVAATEGR-------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V +LP V T+ C VC + L K++PC H +H CI W+S+ N+CPV
Sbjct: 227 VQNLPVVELTQQYLEKNNVVCAVCKDEILLEEKVKRLPCSHHYHGDCIVPWLSIRNTCPV 286
Query: 112 CR 113
CR
Sbjct: 287 CR 288
>gi|328707681|ref|XP_003243468.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin-like
[Acyrthosiphon pisum]
Length = 646
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
++L + A E C +C E+ + A K++PC H+FH +C+ +W +CP CR ++
Sbjct: 289 ATLQDLQAIENVCIICRED-MTAAAAKKLPCNHIFHTSCLRSWFQRHQTCPTCRLDIL 345
>gi|297824197|ref|XP_002879981.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325820|gb|EFH56240.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 57 LTVSSLPT--------VAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN 107
L ++SLPT VA TE C VC+ + + +P C HVFH TC+ TW++ +
Sbjct: 80 LVIASLPTFVVGVKNEVAGTE--CAVCLSLLEEKDNARMLPNCKHVFHVTCVDTWLTTQS 137
Query: 108 SCPVCRS 114
+CPVCR+
Sbjct: 138 TCPVCRT 144
>gi|449447448|ref|XP_004141480.1| PREDICTED: uncharacterized protein LOC101208708 [Cucumis sativus]
Length = 415
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + F +++PCGH +H CI W+++ N+CPVCR
Sbjct: 338 CAVCKDKFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCR 379
>gi|383138286|gb|AFG50296.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
Length = 140
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
CTVC E+F +Q+PC H++H CI W+ + +SCPVCR
Sbjct: 15 CTVCKEDFEVGEETRQLPCKHLYHHGCIMPWLKMHSSCPVCR 56
>gi|361067937|gb|AEW08280.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138262|gb|AFG50284.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138264|gb|AFG50285.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138266|gb|AFG50286.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138268|gb|AFG50287.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138270|gb|AFG50288.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138272|gb|AFG50289.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138274|gb|AFG50290.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138276|gb|AFG50291.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138278|gb|AFG50292.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138280|gb|AFG50293.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138282|gb|AFG50294.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138284|gb|AFG50295.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138288|gb|AFG50297.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138290|gb|AFG50298.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138292|gb|AFG50299.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138294|gb|AFG50300.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
gi|383138296|gb|AFG50301.1| Pinus taeda anonymous locus 2_5309_02 genomic sequence
Length = 140
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
CTVC E+F +Q+PC H++H CI W+ + +SCPVCR
Sbjct: 15 CTVCKEDFEVGEETRQLPCKHLYHHGCIMPWLKMHSSCPVCR 56
>gi|157867008|ref|XP_001682059.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125510|emb|CAJ03371.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 478
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A + RCT+C E+ + K++PCGH +H C+ W+ ++CP CR+ ++
Sbjct: 284 ARDVRCTICYEDMVPGGGTKRLPCGHCYHIDCLERWLEGHSTCPYCRANIM 334
>gi|12325314|gb|AAG52595.1|AC016447_4 unknown protein; 88740-88303 [Arabidopsis thaliana]
Length = 145
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
E C +C E F GK++ C H++H++CI +W+++ N+CP+CR V
Sbjct: 30 VKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 79
>gi|226490942|ref|NP_001150472.1| LOC100284102 [Zea mays]
gi|195639490|gb|ACG39213.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 298
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC E Q +PCGH +H CI W+++ N+CPVCR
Sbjct: 223 ECAVCKEGMEQGELTTGLPCGHFYHGACIGPWLAIRNTCPVCR 265
>gi|62858705|ref|NP_001017083.1| autocrine motility factor receptor, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|89266846|emb|CAJ83385.1| autocrine motility factor receptor [Xenopus (Silurana) tropicalis]
gi|112419321|gb|AAI21832.1| autocrine motility factor receptor [Xenopus (Silurana) tropicalis]
Length = 635
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ + A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 312 GNMEAHFAVATPEELEANSDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 368
Query: 111 VCR 113
CR
Sbjct: 369 TCR 371
>gi|133968854|ref|NP_740965.2| Protein B0432.13 [Caenorhabditis elegans]
gi|351018035|emb|CCD61945.1| Protein B0432.13 [Caenorhabditis elegans]
Length = 451
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 59 VSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
++S PT ++ +G C++C E+ Q + CGH++H CIS WI+ CP CR V
Sbjct: 1 MTSQPT-SSLQGSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSCRRTV 57
>gi|399529262|gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEG----RCTVCMENFLQAFPGKQVP-CGHVFHAT 97
Q+QP S G E + +PT G C VC+ F +Q+P C H FH
Sbjct: 64 QEQPASRRGL--EEAAIRRIPTFRYQSGSNKQECAVCLAEFRDGERLRQLPPCLHAFHID 121
Query: 98 CISTWISLSNSCPVCRSGVIA 118
CI W+ + +CP+CR+ V A
Sbjct: 122 CIDAWLQSTANCPLCRAAVSA 142
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+AA + C +C+ + + +++PCGH FH TCI W+ ++ +CP+C+ +
Sbjct: 319 LAAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPLCKYNI 370
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+AA + C +C+ + + +++PCGH FH TCI W+ ++ +CP+C+ +
Sbjct: 319 LAAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPLCKYNI 370
>gi|118380272|ref|XP_001023300.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305067|gb|EAS03055.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 358
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C++C+E+ + +Q+ CGH+FH CI+ W+SL+ CP CR
Sbjct: 310 CSICLEDIQKNKRVRQLNCGHIFHIKCIAQWLSLNCKCPYCR 351
>gi|226492385|ref|NP_001148380.1| LOC100281993 [Zea mays]
gi|195618780|gb|ACG31220.1| protein binding protein [Zea mays]
Length = 339
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 58 TVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ SSL E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 278 SFSSLRFATEMERKCSICQEEFETNEEMGRLDCGHSYHVYCIKQWLSQKNICPVCKTAV 336
>gi|145513885|ref|XP_001442853.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410214|emb|CAK75456.1| unnamed protein product [Paramecium tetraurelia]
Length = 179
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 55 SELTVSSLPTVAA----TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
SE +S+L A + C +C E+F + ++ C H FH C++ W+ ++NSCP
Sbjct: 113 SETQISTLREHVADINDQQSTCYICQEDFKEEEVELEMSCSHNFHKDCLTQWLKINNSCP 172
Query: 111 VCRSGV 116
VCR+ +
Sbjct: 173 VCRAKI 178
>gi|56758082|gb|AAW27181.1| SJCHGC07006 protein [Schistosoma japonicum]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 41 PDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIS 100
PD Q S D E ++ + RC +C+++++++ +Q+ C H FHA+C+
Sbjct: 171 PDDKQKSSFD-----ETQTTNAQNYLSECDRCMICLDDYVESQQIRQMRCLHEFHASCVD 225
Query: 101 TWISLSNSCPVCRSGVI 117
W+ +CP+CR+
Sbjct: 226 KWLKTKRTCPLCRADAF 242
>gi|115487272|ref|NP_001066123.1| Os12g0140600 [Oryza sativa Japonica Group]
gi|77553626|gb|ABA96422.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|108862175|gb|ABG21879.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|108862176|gb|ABG21880.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113648630|dbj|BAF29142.1| Os12g0140600 [Oryza sativa Japonica Group]
gi|125578460|gb|EAZ19606.1| hypothetical protein OsJ_35182 [Oryza sativa Japonica Group]
gi|215715290|dbj|BAG95041.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766935|dbj|BAG99163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 171
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 43 QDQPKSHDGQ-------TNSELTVSSLPTVAAT-EGRCTVCMENFLQAFPGKQVPCGHVF 94
+D+ SHDG + + P + T E C VC+E F + + +PC H F
Sbjct: 65 EDRENSHDGAFGCGDRASAKAMVTLHQPNLGETREQDCAVCLEPFEEGNTLRMMPCFHSF 124
Query: 95 HATCISTWISLSNSCPVCR 113
H CI +W+ +S CPVCR
Sbjct: 125 HQRCIFSWLRISRICPVCR 143
>gi|242088723|ref|XP_002440194.1| hypothetical protein SORBIDRAFT_09g027550 [Sorghum bicolor]
gi|241945479|gb|EES18624.1| hypothetical protein SORBIDRAFT_09g027550 [Sorghum bicolor]
Length = 376
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
RC++C E F ++ CGH +H CI W+S N+CPVC++ V
Sbjct: 328 RCSICQEEFEANEETGKLSCGHTYHVHCIKQWLSRKNACPVCKTTV 373
>gi|302773077|ref|XP_002969956.1| hypothetical protein SELMODRAFT_8109 [Selaginella moellendorffii]
gi|302799334|ref|XP_002981426.1| hypothetical protein SELMODRAFT_8111 [Selaginella moellendorffii]
gi|300150966|gb|EFJ17614.1| hypothetical protein SELMODRAFT_8111 [Selaginella moellendorffii]
gi|300162467|gb|EFJ29080.1| hypothetical protein SELMODRAFT_8109 [Selaginella moellendorffii]
Length = 73
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S + S+PT+ ++ C VC +++ +Q+PC HV+H CI W++L
Sbjct: 4 SRQQIDSMPTITISKDHLRNDEFSSCAVCKDDYAVGNKVRQMPCKHVYHQDCILPWLALH 63
Query: 107 NSCPVCRSGV 116
+CPVCR V
Sbjct: 64 GTCPVCRYDV 73
>gi|224064214|ref|XP_002188534.1| PREDICTED: E3 ubiquitin-protein ligase AMFR, partial [Taeniopygia
guttata]
Length = 617
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 295 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 351
Query: 111 VCR 113
CR
Sbjct: 352 TCR 354
>gi|224170860|ref|XP_002339432.1| predicted protein [Populus trichocarpa]
gi|222875105|gb|EEF12236.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
CTVCME ++PC HV+H+ CI W+ S SCP+CR
Sbjct: 122 CTVCMEGIEAGSEATRMPCSHVYHSDCIVQWLRTSYSCPLCR 163
>gi|224133144|ref|XP_002321493.1| predicted protein [Populus trichocarpa]
gi|222868489|gb|EEF05620.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
E +C++C + F +A ++ CGH FH CI W++ N+CPVC++ +A
Sbjct: 75 EKKCSICQDEFEEADELGKLDCGHGFHIQCIKKWLAQKNTCPVCKTEPVA 124
>gi|341038429|gb|EGS23421.1| hypothetical protein CTHT_0001100 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 419
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VC+E +PC HVFH CI W++L N+CPVCR V
Sbjct: 366 CVVCVEEMRLGEEVAVLPCRHVFHGQCIGQWLALHNTCPVCRRSV 410
>gi|326517088|dbj|BAJ99910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ S+P V T C VC E F +++PC H++HA CI W+ NSCPV
Sbjct: 207 AIDSMPVVRITRRHLSDDPVCPVCTERFEVGSEAREMPCKHLYHANCIIPWLVQHNSCPV 266
Query: 112 CR 113
CR
Sbjct: 267 CR 268
>gi|300176155|emb|CBK23466.2| unnamed protein product [Blastocystis hominis]
Length = 422
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
C++C + ++PCGH FH CISTW NSCP+CRS
Sbjct: 147 CSICETEYAPNDDIVKLPCGHAFHLACISTWGEKHNSCPLCRS 189
>gi|410922309|ref|XP_003974625.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Takifugu
rubripes]
Length = 157
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 55 SELTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+LTV + A +G +C VC+ F + +++PC H+FH+ CI W+ +NSCP+CR
Sbjct: 62 QKLTVVIISPEQADKGLKCPVCLLEFEEQETVREMPCKHLFHSGCILPWLGKTNSCPLCR 121
>gi|387597389|gb|EIJ95009.1| hypothetical protein NEPG_00534 [Nematocida parisii ERTm1]
Length = 278
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 60 SSLPTVAAT--EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI-SLSNSCPVCRSGV 116
+ +P V A EG C +C++N + +++ C H FH+ C+S W+ S SN CP+CR
Sbjct: 209 AEIPEVKAEGGEGECPICLQNIEKEETIRKLICHHTFHSECVSEWLTSYSNECPMCRKEA 268
Query: 117 I 117
+
Sbjct: 269 V 269
>gi|363738017|ref|XP_414064.3| PREDICTED: E3 ubiquitin-protein ligase AMFR [Gallus gallus]
Length = 622
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 299 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 355
Query: 111 VCR 113
CR
Sbjct: 356 TCR 358
>gi|19115091|ref|NP_594179.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638425|sp|Q9C1X4.1|YKW3_SCHPO RecName: Full=Uncharacterized RING finger protein P32A8.03c
gi|13093904|emb|CAC29482.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 513
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
EG CT+CME F Q+PC H FH CI W+ ++ +C +CR+ V
Sbjct: 393 EGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPV 440
>gi|444725613|gb|ELW66174.1| E3 ubiquitin-protein ligase AMFR [Tupaia chinensis]
Length = 861
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 501 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 557
Query: 111 VCR 113
CR
Sbjct: 558 TCR 560
>gi|432874971|ref|XP_004072610.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like isoform 1
[Oryzias latipes]
gi|432874973|ref|XP_004072611.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like isoform 2
[Oryzias latipes]
Length = 157
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 57 LTVSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
LTV + A +G +C VC+ F + +++PC H+FH+ CI W+ +NSCP+CR
Sbjct: 64 LTVVIISAEQADKGVKCPVCLLEFEEQETVREMPCKHLFHSGCILPWLGKTNSCPLCR 121
>gi|308051819|gb|ADO00337.1| RING protein [Elaeis guineensis]
Length = 281
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 15 SGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTV 74
SG P D + + ++ ++ PP S + + +L V T C++
Sbjct: 184 SGVPYRDLTHDAEDVYSLQNVCKKKPPGL----SWEAICSLQLEVFKYAEKGGTLPECSI 239
Query: 75 CMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C+E FL+ Q+ CGH FH TC+ W+ CP CR+ +
Sbjct: 240 CLEKFLEGDELIQLCCGHRFHFTCLEPWVWACGDCPYCRASI 281
>gi|346464887|gb|AEO32288.1| hypothetical protein [Amblyomma maculatum]
Length = 341
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ +PTV + + CTVC+E F K++PC H FH CI W+ L +CP+
Sbjct: 199 KIEQIPTVKIAQEQVDKLLQCTVCVEEFKTGEQVKRLPCQHHFHPDCIVPWLELHGTCPI 258
Query: 112 CRS 114
CR
Sbjct: 259 CRK 261
>gi|432101735|gb|ELK29739.1| E3 ubiquitin-protein ligase AMFR [Myotis davidii]
Length = 548
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|403343906|gb|EJY71287.1| RING finger protein [Oxytricha trifallax]
Length = 662
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
CTVC +N + G +PCGH++H C++ W+ N+CPVCR
Sbjct: 613 CTVCCDNIALSQKGMFMPCGHIYHPDCLNPWLEQHNTCPVCR 654
>gi|15232672|ref|NP_188195.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|11994346|dbj|BAB02305.1| unnamed protein product [Arabidopsis thaliana]
gi|332642200|gb|AEE75721.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 224
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 54 NSELTVSSLPT-VAATEGRCTVCMENFLQA--FPGKQVPCGHVFHATCISTWISLSNSCP 110
N E L T V EG C +CM+N ++PC HVFH TC W+ S CP
Sbjct: 157 NDEAVEMHLETLVVENEGYCVICMDNIRVGSDVEAGRMPCSHVFHRTCGEEWLRNSGICP 216
Query: 111 VCRS 114
VCR+
Sbjct: 217 VCRA 220
>gi|147899866|ref|NP_001085387.1| MGC78940 protein [Xenopus laevis]
gi|48734802|gb|AAH72063.1| MGC78940 protein [Xenopus laevis]
Length = 635
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ + A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 312 GNMEAHFAVATPEELEANSDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 368
Query: 111 VCR 113
CR
Sbjct: 369 TCR 371
>gi|2979531|gb|AAC06149.1| R33683_3 [Homo sapiens]
Length = 103
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +LPTV TE C VC +++ +Q+PC H+FH CI W+ +SCPVC
Sbjct: 2 IQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVC 61
Query: 113 RSGVIA 118
R +
Sbjct: 62 RKSLTG 67
>gi|198452390|ref|XP_001358751.2| GA15139 [Drosophila pseudoobscura pseudoobscura]
gi|198131912|gb|EAL27894.2| GA15139 [Drosophila pseudoobscura pseudoobscura]
Length = 662
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|326490868|dbj|BAJ90101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
A E +CTVC+E + + +P CGH FHA CI TW+ +CP+CRS
Sbjct: 99 AQEESQCTVCLEEYEAKDVVRVLPYCGHAFHAACIDTWLRHHPTCPICRS 148
>gi|15233714|ref|NP_192649.1| RING-H2 finger protein ATL39 [Arabidopsis thaliana]
gi|68565320|sp|Q9M0R7.1|ATL39_ARATH RecName: Full=RING-H2 finger protein ATL39
gi|7267553|emb|CAB78034.1| putative protein [Arabidopsis thaliana]
gi|66865938|gb|AAY57603.1| RING finger family protein [Arabidopsis thaliana]
gi|89111852|gb|ABD60698.1| At4g09100 [Arabidopsis thaliana]
gi|332657322|gb|AEE82722.1| RING-H2 finger protein ATL39 [Arabidopsis thaliana]
Length = 132
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 46 PKSHDGQTNSELTVSSLPTVAATEGR----------CTVCMENFLQAFPGKQVP-CGHVF 94
P+ D + + S P+ TE R C VC+ F + VP C HVF
Sbjct: 54 PRGLDAEA-----IKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVF 108
Query: 95 HATCISTWISLSNSCPVCRSGVI 117
HA C+ W+S S++CP+CR+ V+
Sbjct: 109 HADCVDIWLSHSSTCPICRAKVV 131
>gi|387593728|gb|EIJ88752.1| hypothetical protein NEQG_01442 [Nematocida parisii ERTm3]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 60 SSLPTVAAT--EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWI-SLSNSCPVCRSGV 116
+ +P V A EG C +C++N + +++ C H FH+ C+S W+ S SN CP+CR
Sbjct: 136 AEIPEVKAEGGEGECPICLQNIEKEETIRKLICHHTFHSECVSEWLTSYSNECPMCRKEA 195
Query: 117 I 117
+
Sbjct: 196 V 196
>gi|326504222|dbj|BAJ90943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 59 VSSLPTVAATEG-------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
V LPTV E +C VC + +++PC H++H CI W+++ N+CP+
Sbjct: 215 VEGLPTVVVAEADAVRGGAQCAVCKDGIEAGEGARRLPCAHLYHDACILPWLAIRNTCPL 274
Query: 112 CR 113
CR
Sbjct: 275 CR 276
>gi|326489897|dbj|BAJ94022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505686|dbj|BAJ95514.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C E++ +V CGH FH CI W+ + N+CP+C+ +A
Sbjct: 659 CCICQEDYTDGEDMGRVECGHYFHTECIKQWLVIKNTCPICKKAALA 705
>gi|95007167|emb|CAJ20388.1| Zinc finger, putative [Toxoplasma gondii RH]
Length = 768
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
C +C+E+F+ + +PCGHVFH TCI +W + S CP+C
Sbjct: 582 CAICIEDFVPTALVRLLPCGHVFHRTCIDSWFTRSTLCPLC 622
>gi|226510020|ref|NP_001151934.1| RING-H2 finger protein ATL3F [Zea mays]
gi|195651209|gb|ACG45072.1| RING-H2 finger protein ATL3F [Zea mays]
Length = 182
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCR 113
A G+C VC+ G+ +P C HVFH CI TW+ +S++CPVCR
Sbjct: 108 AELHGQCVVCLGEMEDGELGRLLPGCRHVFHVECIDTWLGVSSTCPVCR 156
>gi|146082191|ref|XP_001464470.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398012952|ref|XP_003859669.1| hypothetical protein, conserved [Leishmania donovani]
gi|134068562|emb|CAM66858.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322497885|emb|CBZ32961.1| hypothetical protein, conserved [Leishmania donovani]
Length = 478
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A + RCT+C E+ + K++PCGH +H C+ W+ ++CP CR+ ++
Sbjct: 284 ARDVRCTICYEDMVPGGGTKRLPCGHCYHIDCLERWLEGHSTCPYCRANIM 334
>gi|147901912|ref|NP_001083159.1| autocrine motility factor receptor, E3 ubiquitin protein ligase
[Xenopus laevis]
gi|37805183|gb|AAH60333.1| MGC68459 protein [Xenopus laevis]
Length = 636
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ + A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 312 GNMEAHFAVATPEELEANSDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 368
Query: 111 VCR 113
CR
Sbjct: 369 TCR 371
>gi|357129365|ref|XP_003566333.1| PREDICTED: RING-H2 finger protein ATL2-like [Brachypodium
distachyon]
Length = 210
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 56 ELTVSSLPT--------VAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLS 106
E SSLP A +G C VC+ F + +P CGH FHA C+ W+ L
Sbjct: 114 EDIASSLPVSVFDSSRDAADRDGDCAVCIVEFRDGELARLLPRCGHRFHAACVDAWLRLH 173
Query: 107 NSCPVCRSGVI 117
+CP+CR+ V+
Sbjct: 174 ATCPLCRASVV 184
>gi|289742067|gb|ADD19781.1| zinc finger protein 364 [Glossina morsitans morsitans]
Length = 352
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +P V T+ +C+VC E+F +++PC H+FH CI W+ L +CP+C
Sbjct: 197 IDEIPKVEVTKDVVDSKLQCSVCWEDFKLKEIVRKLPCSHLFHEDCIVPWLDLHGTCPIC 256
Query: 113 RSGV 116
R +
Sbjct: 257 RKSL 260
>gi|449282554|gb|EMC89387.1| Autocrine motility factor receptor, partial [Columba livia]
Length = 559
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 235 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 291
Query: 111 VCR 113
CR
Sbjct: 292 TCR 294
>gi|357143619|ref|XP_003572985.1| PREDICTED: uncharacterized protein LOC100832254 [Brachypodium
distachyon]
Length = 312
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 38 STPPDQDQPKSHDGQTNSELTVSSLPTV---AATEG--RCTVCMENFLQAFPGKQVPCGH 92
+T + ++P + G+ ++ V LPTV AA G +C VC + +++PC H
Sbjct: 185 ATEAEHEEPPAKGGRAAAKAAVEGLPTVVVDAAEAGGAQCAVCKDGIEAGDGARRLPCAH 244
Query: 93 VFHATCISTWISLSNSCPVCR 113
++H CI W+++ N+CP+CR
Sbjct: 245 LYHGGCILPWLAIRNTCPLCR 265
>gi|356557503|ref|XP_003547055.1| PREDICTED: uncharacterized protein LOC100803179 [Glycine max]
Length = 315
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+++LP V A++ C +C + F +++PC H +H+ CI W+ + N+CPVC
Sbjct: 180 IAALPMVKLTQTHLASDPNCPICKDEFELDMEARELPCKHFYHSDCIIPWLRMHNTCPVC 239
Query: 113 R 113
R
Sbjct: 240 R 240
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 51 GQTNSE------LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWIS 104
GQ NSE + ++ + C +C+ +L+ +++PC H FHA C+ W+
Sbjct: 346 GQRNSEEGGIVAIGTEKERVISGEDAVCCICLARYLEDDEMRELPCAHFFHAVCVDRWLK 405
Query: 105 LSNSCPVCRSGVI 117
++ +CP+C+ ++
Sbjct: 406 INATCPLCKFEIL 418
>gi|297723739|ref|NP_001174233.1| Os05g0164200 [Oryza sativa Japonica Group]
gi|255676054|dbj|BAH92961.1| Os05g0164200 [Oryza sativa Japonica Group]
Length = 178
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 71 RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
+C VC+ G+ +P C HVFHA CI TW+++S++CPVCR+ V
Sbjct: 112 QCAVCLGEMEDGELGRLLPACRHVFHAECIDTWLAVSSTCPVCRAAV 158
>gi|224143833|ref|XP_002325090.1| predicted protein [Populus trichocarpa]
gi|222866524|gb|EEF03655.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 29 ALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQA-FPGKQ 87
AL + SS PP K + + P AA + C VC+E+ Q +
Sbjct: 53 ALHRHSTPSSNPPKGLPLKDLKKLPRFRFSTKTTPETAADQSSCVVCLEDIKQGQWCRNL 112
Query: 88 VPCGHVFHATCISTWISLSNSCPVCRSGV 116
V CGHV H C+ +W+ ++CP+CR+ V
Sbjct: 113 VGCGHVLHMKCVDSWLVKVSACPICRTRV 141
>gi|145518814|ref|XP_001445279.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412723|emb|CAK77882.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 43 QDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTW 102
++QPK + + + +P TE C VC+ FL+ ++ PC H FH C+ W
Sbjct: 311 EEQPKISLDVLDKYMPIKPVPKHQLTET-CCVCLVQFLKRDQTRETPCKHYFHTNCLRDW 369
Query: 103 ISLSNSCPVCRSGV 116
+ +CPVCR +
Sbjct: 370 TKKNTTCPVCRQEL 383
>gi|15224210|ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana]
gi|75339071|sp|Q9ZV51.1|ATL56_ARATH RecName: Full=RING-H2 finger protein ATL56
gi|4185133|gb|AAD08936.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|15450663|gb|AAK96603.1| At2g18670/MSF3.5 [Arabidopsis thaliana]
gi|20466087|gb|AAM19965.1| At2g18670/MSF3.5 [Arabidopsis thaliana]
gi|66865918|gb|AAY57593.1| RING finger family protein [Arabidopsis thaliana]
gi|330251697|gb|AEC06791.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana]
Length = 181
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
+ S T E C VC + F Q + +P CGHVFH C+ TW+ +++CP+CR+
Sbjct: 94 QFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 153
Query: 115 GV 116
V
Sbjct: 154 RV 155
>gi|452824708|gb|EME31709.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 412
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 22 ESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTV--SSLPTVAATEGRCTVCMENF 79
++ NL++ ++ + + + P + N L + S + +G C +C+E+
Sbjct: 293 QTRNLNKRISAVQSLPQYVYHEAGPVYANSHMNRRLCIHMSHENILEGNQGICAICLESL 352
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ ++ CGH+FH CI W+ SN CP C+ V+
Sbjct: 353 IEDEVVRKFQCGHIFHKDCIDPWLLQSNLCPTCKRNVLG 391
>gi|222619089|gb|EEE55221.1| hypothetical protein OsJ_03093 [Oryza sativa Japonica Group]
Length = 167
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
SS E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 108 SSFRYSTEMEKKCSICQEEFEANEEMGRLDCGHSYHVYCIKQWLSQKNVCPVCKTAV 164
>gi|410050348|ref|XP_001135064.2| PREDICTED: E3 ubiquitin-protein ligase AMFR [Pan troglodytes]
gi|119603263|gb|EAW82857.1| hCG1811773, isoform CRA_c [Homo sapiens]
gi|119603264|gb|EAW82858.1| hCG1811773, isoform CRA_c [Homo sapiens]
gi|343958560|dbj|BAK63135.1| autocrine motility factor receptor, isoform 2 [Pan troglodytes]
Length = 548
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|242051280|ref|XP_002463384.1| hypothetical protein SORBIDRAFT_02g042800 [Sorghum bicolor]
gi|241926761|gb|EER99905.1| hypothetical protein SORBIDRAFT_02g042800 [Sorghum bicolor]
Length = 151
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 31 TMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA---ATEGRCTVCMENFLQAFPGKQ 87
T + +S PP + P S V ++ A A C VC+ F + G+
Sbjct: 59 TSLPAAASPPPRRAMPLSSSSSLLPVFFVLNVGVPAGPGAETAECAVCLTEFGEREAGRL 118
Query: 88 VP-CGHVFHATCISTWISLSNSCPVCRSGV 116
+P CGH FH CI+TW+ +S +CP+CR+ V
Sbjct: 119 LPGCGHAFHEQCIATWLRVSTTCPLCRAPV 148
>gi|346703276|emb|CBX25374.1| hypothetical_protein [Oryza brachyantha]
Length = 143
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 64 TVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
TV T+ + +E+F + K+ PC H FHA+CIS W+ LS CP CR
Sbjct: 77 TVGETKEKACAVLEDFEEGERLKRTPCSHGFHASCISEWLRLSRLCPHCR 126
>gi|154422013|ref|XP_001584019.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918264|gb|EAY23033.1| hypothetical protein TVAG_182690 [Trichomonas vaginalis G3]
Length = 278
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 59 VSSLPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ SLP++ E C +C + + K++PCGH FHA C+ W+ N CP+C +
Sbjct: 108 LDSLPSIKPEEDDVCIICRLGY-EGEEAKRLPCGHTFHANCLERWVKSHNRCPICEQEI 165
>gi|21617980|gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 181
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
+ S T E C VC + F Q + +P CGHVFH C+ TW+ +++CP+CR+
Sbjct: 94 QFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 153
Query: 115 GV 116
V
Sbjct: 154 RV 155
>gi|355668159|gb|AER94100.1| autocrine motility factor receptor isoform a [Mustela putorius
furo]
Length = 545
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 222 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 278
Query: 111 VCR 113
CR
Sbjct: 279 TCR 281
>gi|354482980|ref|XP_003503673.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Cricetulus griseus]
Length = 572
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 249 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 305
Query: 111 VCR 113
CR
Sbjct: 306 TCR 308
>gi|345313400|ref|XP_003429383.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Ornithorhynchus
anatinus]
Length = 547
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 250 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 306
Query: 111 VCR 113
CR
Sbjct: 307 TCR 309
>gi|297821176|ref|XP_002878471.1| hypothetical protein ARALYDRAFT_907844 [Arabidopsis lyrata subsp.
lyrata]
gi|297324309|gb|EFH54730.1| hypothetical protein ARALYDRAFT_907844 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
C+VC+ F + G+ +P CGHVFH CI TW +SCP+CR+ V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158
>gi|15227513|ref|NP_178400.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|3461824|gb|AAC32918.1| hypothetical protein [Arabidopsis thaliana]
gi|330250559|gb|AEC05653.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 535
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V+ LP VA E G C +C E + ++ ++PC H +H C+ W+ + SCP CR
Sbjct: 467 VAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCR 522
>gi|281204112|gb|EFA78308.1| hypothetical protein PPL_08959 [Polysphondylium pallidum PN500]
Length = 154
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 12 NIVSGSPII--DESFNLD-EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAAT 68
NIV+G I D+ LD E + I + TPP + ELT + T
Sbjct: 8 NIVNGIRFIGEDDHEELDIERIKFIMKHTPTPPISEY-------QFQELTEEVIITKRNK 60
Query: 69 E--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
E G CT+C+ F ++PC H +H CI+ W+ + ++CP CR+ +
Sbjct: 61 ERIGDCTICVNEFPLDTEAIKLPCKHYYHFDCITQWLKMHSNCPNCRTQL 110
>gi|194696146|gb|ACF82157.1| unknown [Zea mays]
gi|413944538|gb|AFW77187.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 182
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCR 113
A G+C VC+ G+ +P C HVFH CI TW+ +S++CPVCR
Sbjct: 108 AELHGQCVVCLGEMEDGELGRLLPGCRHVFHVECIDTWLGVSSTCPVCR 156
>gi|145477207|ref|XP_001424626.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391691|emb|CAK57228.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 41 PDQDQPKSHDGQTNSELTVSSLPTVAAT---EGRCTVCMENFLQAFPGKQVPCGHVFHAT 97
P +D Q SE + LP E C++C N L+ ++ C H+FH+
Sbjct: 295 PPRDPYIRQSAQVISEEQIEMLPVQKFKMEFEFVCSICDMNLLKNEMVMKLNCSHIFHSE 354
Query: 98 CISTWISLSNSCPVCRSGVIA 118
C+ WI + NSCP CR +++
Sbjct: 355 CLKPWIRIKNSCPNCRQQILS 375
>gi|422294236|gb|EKU21536.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
gi|422294277|gb|EKU21577.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
Length = 502
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C +C+ +F + +++PCGHV+H+ C+ W S+++ CP+C+S V
Sbjct: 262 CCICLTDFERTDLVRKLPCGHVYHSECVDCWFSVNSVCPLCKSDV 306
>gi|326927041|ref|XP_003209703.1| PREDICTED: e3 ubiquitin-protein ligase AMFR-like [Meleagris
gallopavo]
Length = 596
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 274 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 330
Query: 111 VCR 113
CR
Sbjct: 331 TCR 333
>gi|298204569|emb|CBI23844.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENF 79
L+EA+ +T+ T + Q + + +LP+V T C VC E +
Sbjct: 152 LNEAMEELTHNEVTG-ENTQNDRPGPPPAAPSAIEALPSVRLTPTHLRNDPCCPVCKEEY 210
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++PC H++H+ CI W+ + NSCPVCR + A
Sbjct: 211 QAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELEA 249
>gi|168052424|ref|XP_001778650.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669968|gb|EDQ56545.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ C +C E A K++PCGH FH C+ +W+ +CP CR+ V A
Sbjct: 288 SDATCIICREEMSAA---KKLPCGHFFHVHCLRSWLERQQTCPTCRAPVFA 335
>gi|297284027|ref|XP_001091030.2| PREDICTED: autocrine motility factor receptor, isoform 2 [Macaca
mulatta]
Length = 552
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 229 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 285
Query: 111 VCR 113
CR
Sbjct: 286 TCR 288
>gi|195145094|ref|XP_002013531.1| GL23355 [Drosophila persimilis]
gi|194102474|gb|EDW24517.1| GL23355 [Drosophila persimilis]
Length = 662
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|426243532|ref|XP_004015608.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Ovis aries]
Length = 585
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 262 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 318
Query: 111 VCR 113
CR
Sbjct: 319 TCR 321
>gi|357616388|gb|EHJ70168.1| zinc finger protein 364 [Danaus plexippus]
Length = 443
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
A E C+VC ENF ++ C HVFH +CI+ W+ L +CP+CR +I
Sbjct: 250 ARAEVACSVCWENFQIGEMVSRLECEHVFHQSCITPWLQLHATCPICRRSLI 301
>gi|224121188|ref|XP_002330765.1| predicted protein [Populus trichocarpa]
gi|222872567|gb|EEF09698.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
RC++C E + ++PC H +H CI W+SL N CP+C++
Sbjct: 447 RCSICQEEYADGDEVGRLPCEHRYHVACIHQWLSLKNWCPICKT 490
>gi|294911925|ref|XP_002778099.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239886220|gb|EER09894.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 313
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
LT+ S T G C VCM++ + + +PC H +HA CI W+ S +CPVC++ +
Sbjct: 226 LTIQS--TCKEARGNCAVCMDSLKKGEMLRTLPCMHRYHAACIDEWLKSSPTCPVCKTSI 283
Query: 117 I 117
+
Sbjct: 284 L 284
>gi|148679162|gb|EDL11109.1| autocrine motility factor receptor [Mus musculus]
Length = 558
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 235 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 291
Query: 111 VCR 113
CR
Sbjct: 292 TCR 294
>gi|344289346|ref|XP_003416405.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Loxodonta
africana]
Length = 565
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 242 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 298
Query: 111 VCR 113
CR
Sbjct: 299 TCR 301
>gi|170060082|ref|XP_001865645.1| HSPC238 [Culex quinquefasciatus]
gi|167878652|gb|EDS42035.1| HSPC238 [Culex quinquefasciatus]
Length = 149
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 17/70 (24%)
Query: 55 SELTVSSLPT--VAATEGRCTVCM---------ENFLQAFPGKQVPCGHVFHATCISTWI 103
S+ V++LP VAA + RC +C+ E FL +PCGH FH +CI W+
Sbjct: 50 SKALVAALPERQVAADDERCAICIKPNDPDGDNEAFLV------LPCGHDFHKSCIVPWL 103
Query: 104 SLSNSCPVCR 113
+NSCP+CR
Sbjct: 104 EKTNSCPLCR 113
>gi|109508431|ref|XP_001062954.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Rattus norvegicus]
Length = 647
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 324 GNMEARFAVATAEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 380
Query: 111 VCR 113
CR
Sbjct: 381 TCR 383
>gi|449437755|ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++P V T+ C VC + F +Q+PC H++H+ CI W+ NS
Sbjct: 159 SRSSIDAMPVVKITQRHIRSNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNS 218
Query: 109 CPVCRSGVIA 118
CPVCR + A
Sbjct: 219 CPVCRQELPA 228
>gi|440902615|gb|ELR53385.1| E3 ubiquitin-protein ligase AMFR, partial [Bos grunniens mutus]
Length = 560
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 237 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 293
Query: 111 VCR 113
CR
Sbjct: 294 TCR 296
>gi|452825762|gb|EME32757.1| E3 ubiquitin-protein ligase RNF128 [Galdieria sulphuraria]
Length = 282
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C++C+E+ +++PCGH+FHATC+ W+ ++ CP+C +I+
Sbjct: 169 CSICLESIRVGDYMRKLPCGHIFHATCVERWLLHAHRCPLCNKDLIS 215
>gi|268534064|ref|XP_002632162.1| Hypothetical protein CBG07021 [Caenorhabditis briggsae]
Length = 247
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+G C++C E+ Q + CGH++H CIS W++ CP CR V
Sbjct: 11 QGSCSICFEDLRQTDKISAIVCGHIYHHGCISQWMAAKKQCPSCRRSV 58
>gi|67969859|dbj|BAE01277.1| unnamed protein product [Macaca fascicularis]
Length = 552
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 229 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 285
Query: 111 VCR 113
CR
Sbjct: 286 TCR 288
>gi|449513932|ref|XP_002188556.2| PREDICTED: E3 ubiquitin-protein ligase Praja-2-like [Taeniopygia
guttata]
Length = 317
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 58 TVSSLPTVAAT--EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
T+ SLP + T E CT+C +++ ++PC H+FH CI+ W+ S +CPVCR
Sbjct: 243 TIVSLPQIFVTGQEQCCTICCSEYVEGEIITELPCHHLFHRPCITLWLQRSGTCPVCR 300
>gi|85000179|ref|XP_954808.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302954|emb|CAI75332.1| hypothetical protein, conserved [Theileria annulata]
Length = 791
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 10 NTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSEL--------TVSS 61
N NI GS S N++ ++T+ T ST P + D + S + V
Sbjct: 523 NVNIDGGSV----SSNINTSVTVSGTTESTTDSTVLPGTKDTKGTSSIGTVGKGADAVGP 578
Query: 62 LPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
TE + C+VC E L+ + CGH+FH C++ W+ NSCP CR+ +I
Sbjct: 579 STVTDVTEDKLCSVCYEIMLKNENIISLRCGHIFHEECVNRWLIDKNSCPYCRTLII 635
>gi|395510609|ref|XP_003759566.1| PREDICTED: RING finger protein 165 [Sarcophilus harrisii]
Length = 347
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFP 84
N E T P + + K DG+ + T+ +CT+C+
Sbjct: 260 NTIERFTFPHKYKKRRPQEGKGKKEDGEESD------------TDEKCTICLSMLEDGED 307
Query: 85 GKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+++PC H+FH C+ W+++S CP+CR +
Sbjct: 308 VRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>gi|334325346|ref|XP_001371377.2| PREDICTED: RING finger protein 165-like [Monodelphis domestica]
Length = 492
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFP 84
N E T P + + K DG+ + T+ +CT+C+
Sbjct: 405 NTIERFTFPHKYKKRRPQEGKGKKEDGEESD------------TDEKCTICLSMLEDGED 452
Query: 85 GKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H+FH C+ W+++S CP+CR
Sbjct: 453 VRRLPCMHLFHQLCVDQWLAMSKKCPICR 481
>gi|224121078|ref|XP_002330898.1| predicted protein [Populus trichocarpa]
gi|222872720|gb|EEF09851.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC + FL KQ+PC H++H CI W+S NSCP+CR
Sbjct: 109 CAVCKDQFLIDVEAKQLPCSHLYHPGCILPWLSNHNSCPLCR 150
>gi|224143836|ref|XP_002325091.1| predicted protein [Populus trichocarpa]
gi|222866525|gb|EEF03656.1| predicted protein [Populus trichocarpa]
Length = 170
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 29 ALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQA-FPGKQ 87
AL + TSS P K + + P A + C VC+E Q +
Sbjct: 59 ALHRHSTTSSNSPKALPLKELKKLPRFRFSTKTRPETGADQSSCVVCLEEIKQGQWCRNL 118
Query: 88 VPCGHVFHATCISTWISLSNSCPVCRSGV 116
V CGHVFH C+ W+ ++CP+CR+ V
Sbjct: 119 VGCGHVFHRKCVDAWLVKVSACPICRTRV 147
>gi|351707658|gb|EHB10577.1| Autocrine motility factor receptor, partial [Heterocephalus glaber]
Length = 591
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 268 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 324
Query: 111 VCR 113
CR
Sbjct: 325 TCR 327
>gi|344243948|gb|EGW00052.1| Autocrine motility factor receptor [Cricetulus griseus]
Length = 464
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 141 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 197
Query: 111 VCR 113
CR
Sbjct: 198 TCR 200
>gi|326435896|gb|EGD81466.1| hypothetical protein PTSG_02184 [Salpingoeca sp. ATCC 50818]
Length = 539
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
C +C+E+ GK++PCGHVFH C+ W+ + +CP CR+
Sbjct: 124 CNICLEDMDS---GKKLPCGHVFHLNCLRRWLQENQTCPACRA 163
>gi|449453133|ref|XP_004144313.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449453135|ref|XP_004144314.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
gi|449488265|ref|XP_004157985.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449488269|ref|XP_004157986.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
Length = 299
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PTV T+ C VC E F +Q+ C H++H+ CI W+ NS
Sbjct: 154 SRSSIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNS 213
Query: 109 CPVCR 113
CPVCR
Sbjct: 214 CPVCR 218
>gi|15221305|ref|NP_177600.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324797|gb|AAG52359.1|AC011765_11 putative RING zinc finger protein; 84572-85321 [Arabidopsis
thaliana]
gi|332197494|gb|AEE35615.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 249
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 LPTVAATEGRCTVCMENFLQAFP-GKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
L E C +CME++++ ++PC H FH CI+ W+ L++ CP+CRS +
Sbjct: 173 LNVATTEENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>gi|227202782|dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]
Length = 173
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 ELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
+ S T E C VC + F Q + +P CGHVFH C+ TW+ +++CP+CR+
Sbjct: 86 QFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 145
Query: 115 GV 116
V
Sbjct: 146 RV 147
>gi|224063076|ref|XP_002300984.1| predicted protein [Populus trichocarpa]
gi|222842710|gb|EEE80257.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC+E FL +PCGH+FH CI W+ S+ CP+CR
Sbjct: 92 ECMVCLEEFLMGSEVVCLPCGHIFHGDCIVRWLETSHLCPLCR 134
>gi|212530208|ref|XP_002145261.1| short chain oxidoreductase/dehydrogenase, putative [Talaromyces
marneffei ATCC 18224]
gi|210074659|gb|EEA28746.1| short chain oxidoreductase/dehydrogenase, putative [Talaromyces
marneffei ATCC 18224]
Length = 777
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 1 MASPYYLAINTNIVSGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVS 60
M + L++ I+ G I D ++ +E +I+ +Q P + +E +
Sbjct: 244 MGPMHPLSLLATILGGGRIGDAVYSQEELDRVISQLVDQNMNQGAPPA------AETAIQ 297
Query: 61 SLPT------VAATEGR--CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
SLP + EGR C++CM+ ++PC H FH CI W+ N+CP C
Sbjct: 298 SLPKKVVDQEMLGVEGRAECSICMDPVELGSEVTELPCKHWFHGDCIEMWLKQHNTCPHC 357
Query: 113 R 113
R
Sbjct: 358 R 358
>gi|449269694|gb|EMC80445.1| RING finger protein 6 [Columba livia]
Length = 677
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C+VC+ ++ +Q+PC H FH CI W+S +++CP+CR V+
Sbjct: 624 CSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLG 670
>gi|449019978|dbj|BAM83380.1| RING zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 395
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 59 VSSLPTVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
V LP ATE C +C+ N+ + +++PC H+FH TCI W S NSCPV +
Sbjct: 273 VELLPLQTATEREESDACPICLSNYERGERLRRLPCLHLFHRTCIDRWFSKQNSCPVDKM 332
Query: 115 GV 116
V
Sbjct: 333 SV 334
>gi|297720305|ref|NP_001172514.1| Os01g0692700 [Oryza sativa Japonica Group]
gi|218188889|gb|EEC71316.1| hypothetical protein OsI_03353 [Oryza sativa Indica Group]
gi|255673579|dbj|BAH91244.1| Os01g0692700 [Oryza sativa Japonica Group]
Length = 201
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
SS E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 142 SSFRYSTEMEKKCSICQEEFEANEEMGRLDCGHSYHVYCIKQWLSQKNVCPVCKTAV 198
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+AA + C +C+ + +++PCGH FH TCI W+ ++ +CP+C+ +
Sbjct: 317 LAAEDAECCICLSAYDDGAELRELPCGHHFHCTCIDKWLHINATCPLCKYNI 368
>gi|118386535|ref|XP_001026386.1| zinc finger protein [Tetrahymena thermophila]
gi|89308153|gb|EAS06141.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 1236
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 63 PTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
PT+ CTVC+E F Q + PC H+FH+ C+ W ++CP CR+
Sbjct: 553 PTLKQEGEECTVCLEGFEQTSECRITPCYHLFHSECLEGWFQKHSTCPYCRN 604
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L+ + A + C+VC+ + + +++PC H +H CI
Sbjct: 556 DDDQPRGLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 614
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 615 WLSENSTCPICRRAVL 630
>gi|302509094|ref|XP_003016507.1| RING finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|302653431|ref|XP_003018542.1| RING finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291180077|gb|EFE35862.1| RING finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291182194|gb|EFE37897.1| RING finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 437
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 59 VSSLPTV--------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+ SLP V + + C++CM+N +PC H FH +CI+ W++ ++CP
Sbjct: 267 IRSLPKVKVDKSMLGSENKAECSICMDNVELDTEVSMLPCKHWFHESCITAWLNEHDTCP 326
Query: 111 VCRSGVIA 118
CR G++A
Sbjct: 327 HCRQGIMA 334
>gi|242018674|ref|XP_002429799.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514811|gb|EEB17061.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 125
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+CT+C+ F + +++PC H+FH C+ W+S + CP+CR +
Sbjct: 69 KCTICLSEFEELEDVRRLPCMHLFHIECVDQWLSTNKRCPICRVDI 114
>gi|355756785|gb|EHH60393.1| E3 ubiquitin-protein ligase AMFR, partial [Macaca fascicularis]
Length = 558
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 235 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 291
Query: 111 VCR 113
CR
Sbjct: 292 TCR 294
>gi|328708855|ref|XP_003243816.1| PREDICTED: hypothetical protein LOC100573509 isoform 1
[Acyrthosiphon pisum]
gi|328708857|ref|XP_003243817.1| PREDICTED: hypothetical protein LOC100573509 isoform 2
[Acyrthosiphon pisum]
Length = 760
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+CT+C+ +F +++PC H+FH CI W+S + CP+CR
Sbjct: 691 KCTICLSDFEDTEDVRRLPCMHLFHVDCIDQWLSSNKRCPICR 733
>gi|157877080|ref|XP_001686872.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129947|emb|CAJ09255.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 550
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 62 LPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
P+VAA + C +C+++F+ K +PCGH FH C+ +W+ + CP CR
Sbjct: 293 FPSVAADPTKTCGICLDDFVHGESVKCLPCGHTFHGACVRSWLIRAAVCPTCR 345
>gi|51536154|dbj|BAD38328.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 192
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
C VC ++ A ++PCGH++HA C W+S NSCPVCR V
Sbjct: 67 CAVCTDDLPPAATACRLPCGHLYHADCFVQWLSRRNSCPVCRRRV 111
>gi|355710207|gb|EHH31671.1| E3 ubiquitin-protein ligase AMFR, partial [Macaca mulatta]
Length = 558
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 235 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 291
Query: 111 VCR 113
CR
Sbjct: 292 TCR 294
>gi|255581205|ref|XP_002531415.1| zinc finger protein, putative [Ricinus communis]
gi|223528965|gb|EEF30957.1| zinc finger protein, putative [Ricinus communis]
Length = 333
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V +LP V T+ C VC + F +++PC H++H+ CI W++L N+CPVC
Sbjct: 173 VEALPVVKITQEHLMKDTHCPVCKDEFEIDGEVRELPCKHLYHSDCIVPWLNLHNTCPVC 232
Query: 113 R 113
R
Sbjct: 233 R 233
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L+ + A + C+VC+ + + +++PC H +H CI
Sbjct: 556 DDDQPRGLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHVHCIDR 614
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 615 WLSENSTCPICRRAVL 630
>gi|392512739|emb|CAD25565.2| putative protein with zinc finger domain [Encephalitozoon cuniculi
GB-M1]
Length = 305
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 53 TNSELTVSSL-PTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTW-ISLSNSC 109
T L SS+ V A +G C +CM NF++ + +PC H FH C+ W + SN C
Sbjct: 239 TKESLKKSSIVRAVEADKGCECAICMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKC 298
Query: 110 PVCRSGV 116
PVCR+ +
Sbjct: 299 PVCRTAI 305
>gi|281346627|gb|EFB22211.1| hypothetical protein PANDA_000015 [Ailuropoda melanoleuca]
Length = 549
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 237 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 293
Query: 111 VCR 113
CR
Sbjct: 294 TCR 296
>gi|119603261|gb|EAW82855.1| hCG1811773, isoform CRA_a [Homo sapiens]
Length = 580
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|56752935|gb|AAW24679.1| SJCHGC00695 protein [Schistosoma japonicum]
Length = 264
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A G C++C ++F ++ ++PC H++H C++TW+ +CPVCR +
Sbjct: 187 ALKLGICSICFDDFKESESVIKLPCAHIYHQNCVTTWLKQHGTCPVCRKDL 237
>gi|113205073|ref|NP_035917.2| E3 ubiquitin-protein ligase AMFR [Mus musculus]
gi|21961199|gb|AAH34538.1| Autocrine motility factor receptor [Mus musculus]
gi|25955672|gb|AAH40338.1| Autocrine motility factor receptor [Mus musculus]
gi|74217972|dbj|BAE41974.1| unnamed protein product [Mus musculus]
Length = 639
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 316 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 372
Query: 111 VCR 113
CR
Sbjct: 373 TCR 375
>gi|307183134|gb|EFN70051.1| E3 ubiquitin-protein ligase synoviolin [Camponotus floridanus]
Length = 539
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
E CT+CM + +++PC H FH+ C+ W+ + SCPVCR V
Sbjct: 382 GNENSCTICMVEYKTGNKLRRMPCAHEFHSKCVDRWLKQNGSCPVCRQQV 431
>gi|226499734|ref|NP_001148308.1| RING-H2 finger protein ATL2K [Zea mays]
gi|195617376|gb|ACG30518.1| RING-H2 finger protein ATL2K [Zea mays]
Length = 238
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 58 TVSSLPTV------AATEG-RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSC 109
V++LPTV A +G CT+C+ + + +P CGHVFH C+ TW + S+SC
Sbjct: 92 AVAALPTVLYRDAGGADDGAECTICLGAVQEGELVRALPACGHVFHVPCVDTWFASSSSC 151
Query: 110 PVCRSGV 116
PVCR+ V
Sbjct: 152 PVCRAEV 158
>gi|194764893|ref|XP_001964562.1| GF22986 [Drosophila ananassae]
gi|190614834|gb|EDV30358.1| GF22986 [Drosophila ananassae]
Length = 633
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMINH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L+ + A + C+VC+ + + +++PC H +H CI
Sbjct: 533 DDDQPRGLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHIHCIDR 591
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 592 WLSENSTCPICRRAVL 607
>gi|357608292|gb|EHJ65915.1| synoviolin [Danaus plexippus]
Length = 535
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E K++PC H+FHA C+ W +CP CR V+
Sbjct: 283 LAAADNECIICREEMHSG--AKKLPCNHIFHAACLRLWFQRQQTCPTCRLNVL 333
>gi|328788399|ref|XP_003251123.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin A-like isoform 1
[Apis mellifera]
Length = 600
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMIAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|326509781|dbj|BAJ87106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 137
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAAT------EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ ++ ++P V T + C VC + F +++PC H++H+ CI W+ NS
Sbjct: 13 SQSSIDAMPRVRITARHLTGDSHCPVCKDKFELGSEAREMPCNHLYHSDCILPWLEQHNS 72
Query: 109 CPVCR 113
CPVCR
Sbjct: 73 CPVCR 77
>gi|126296150|ref|XP_001364690.1| PREDICTED: e3 ubiquitin-protein ligase AMFR [Monodelphis domestica]
Length = 651
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 328 GNMEARFAVATPEELAVNNDDCAICWDSMQSA---RKLPCGHLFHNSCLRSWLEQDTSCP 384
Query: 111 VCR 113
CR
Sbjct: 385 TCR 387
>gi|145512565|ref|XP_001442199.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409471|emb|CAK74802.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 59 VSSLPTVAATEGR-----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ +P A E CT+C + L +Q+PC H++H+ CI W+ CPVC
Sbjct: 224 IKQIPKRAKEENDNVDEICTICYDQILTGNVYRQLPCNHIYHSKCIKAWLLNHKKCPVCN 283
Query: 114 SGVI 117
VI
Sbjct: 284 IEVI 287
>gi|19074455|ref|NP_585961.1| putative protein with zinc finger domain [Encephalitozoon cuniculi
GB-M1]
gi|74664238|sp|Q8SV35.1|Y733_ENCCU RecName: Full=Uncharacterized RING finger protein ECU07_0330
gi|449330103|gb|AGE96367.1| zinc finger domain containing protein [Encephalitozoon cuniculi]
Length = 314
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 53 TNSELTVSSL-PTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTW-ISLSNSC 109
T L SS+ V A +G C +CM NF++ + +PC H FH C+ W + SN C
Sbjct: 248 TKESLKKSSIVRAVEADKGCECAICMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKC 307
Query: 110 PVCRSGV 116
PVCR+ +
Sbjct: 308 PVCRTAI 314
>gi|170590153|ref|XP_001899837.1| rnf126-prov protein [Brugia malayi]
gi|158592756|gb|EDP31353.1| rnf126-prov protein, putative [Brugia malayi]
Length = 257
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 12 NIVSGSPIIDESFN---LDEALTMITNT---SSTPPDQDQPKSHDGQTNSELTVSSLPTV 65
N++ G PI D ++ LD+ +T + N STP D PK N +TV P
Sbjct: 140 NVLHG-PIADYAWGEGGLDQIVTQLLNQFEGGSTPVD---PKL---LANLPMTVVE-PKH 191
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +CT CME F + + C H+FH CI W+ N+CP+CR V A
Sbjct: 192 IDSGAQCTTCMETFKKDELVAILECQHIFHRECILPWLRRHNTCPICRQTVDA 244
>gi|147810089|emb|CAN64712.1| hypothetical protein VITISV_043727 [Vitis vinifera]
Length = 131
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 34 TNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE----GRCTVCMENFLQAFPGKQVP 89
++T+ +PP+ G E +SS+P V T G C +C+ F++ +P
Sbjct: 46 SSTAQSPPN--------GGPXEERILSSVPRVRYTGDGKLGECAICLTEFMKGDEMSVMP 97
Query: 90 -CGHVFHATCISTWISLSNSCPVCR 113
CGH FH CI W+ S+SCP CR
Sbjct: 98 QCGHGFHVKCIERWMRRSSSCPXCR 122
>gi|15242098|ref|NP_197591.1| E3 ubiquitin-protein ligase AIP2 [Arabidopsis thaliana]
gi|75330749|sp|Q8RXD3.1|AIP2_ARATH RecName: Full=E3 ubiquitin-protein ligase AIP2; AltName:
Full=ABI3-interacting protein 2
gi|19698965|gb|AAL91218.1| ABI3-interacting protein 2 [Arabidopsis thaliana]
gi|23198060|gb|AAN15557.1| ABI3-interacting protein 2 [Arabidopsis thaliana]
gi|66865964|gb|AAY57616.1| RING finger family protein [Arabidopsis thaliana]
gi|332005520|gb|AED92903.1| E3 ubiquitin-protein ligase AIP2 [Arabidopsis thaliana]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 204 SKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDE 263
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 264 HNSCPICR 271
>gi|159463100|ref|XP_001689780.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283768|gb|EDP09518.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1408
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C VCME+ + K++PC H FH CI W+ +CP+C+ V+
Sbjct: 597 CAVCMEDLVAGETVKRIPCAHEFHENCIDQWLRTKANCPICQPQVV 642
>gi|449452702|ref|XP_004144098.1| PREDICTED: RING finger protein 126-B-like [Cucumis sativus]
gi|449520974|ref|XP_004167507.1| PREDICTED: RING finger protein 126-B-like [Cucumis sativus]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVA------ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ ++PT+ T+ C VC E F K +PC H++H CI W+ N+CPVC
Sbjct: 175 IEAMPTIKINQMHLGTDSHCPVCKEKFELESEAKALPCNHIYHNDCILPWLVQHNTCPVC 234
Query: 113 R 113
R
Sbjct: 235 R 235
>gi|34922200|sp|Q9R049.2|AMFR_MOUSE RecName: Full=E3 ubiquitin-protein ligase AMFR; AltName:
Full=Autocrine motility factor receptor; Short=AMF
receptor
gi|74178823|dbj|BAE34049.1| unnamed protein product [Mus musculus]
Length = 643
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|346703757|emb|CBX24425.1| hypothetical_protein [Oryza glaberrima]
Length = 153
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 67 ATEGRCTVCMENFLQA--FPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
A E C+VC+E F + P +++PC H FH +CI W+ +S CP+CRS +
Sbjct: 78 AKEKDCSVCLEAFEEESDKPMRKMPCCHAFHESCIFGWLQVSRLCPLCRSAL 129
>gi|332227873|ref|XP_003263117.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Nomascus leucogenys]
Length = 580
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|257206372|emb|CAX82837.1| Heavy metal transport/detoxification protein,domain-containing
protein [Schistosoma japonicum]
Length = 276
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
G C++C ++F ++ ++PC H++H C++TW+ +CPVCR +
Sbjct: 203 GICSICFDDFKESESVIKLPCAHIYHQNCVTTWLKQHGTCPVCRKDL 249
>gi|356507586|ref|XP_003522545.1| PREDICTED: LOW QUALITY PROTEIN: putative RING-H2 finger protein
ATL21A-like [Glycine max]
Length = 291
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 21 DESFNLD------EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCT- 73
+++F LD +AL ++ +P D P++HD + E PT R T
Sbjct: 153 NDTFELDCSRVPSKALRVLV----SPRPHDGPRAHDTVPDFEAPAGXRPTTVTGLDRPTI 208
Query: 74 ------VCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRS 114
V E ++ K +P CGH FHA CI W+ L+ SCP+CR+
Sbjct: 209 ESYPKIVIGEKYMPKETVKTIPECGHCFHAQCIDEWLPLNASCPICRT 256
>gi|242087619|ref|XP_002439642.1| hypothetical protein SORBIDRAFT_09g017860 [Sorghum bicolor]
gi|241944927|gb|EES18072.1| hypothetical protein SORBIDRAFT_09g017860 [Sorghum bicolor]
Length = 205
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C+ F G+ +P CGH FHA C+ TW +CP+CR+ V+A
Sbjct: 118 CAICIAEFADGDEGRLLPRCGHPFHARCVDTWFRFHTTCPLCRATVLA 165
>gi|213514946|ref|NP_001134680.1| RING finger protein 181 [Salmo salar]
gi|209735202|gb|ACI68470.1| RING finger protein 181 [Salmo salar]
gi|209736808|gb|ACI69273.1| RING finger protein 181 [Salmo salar]
Length = 156
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVA-----ATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V +LP V A +G +C VC+ F + +++PC H+FH+ CI W+ +NSCP+C
Sbjct: 60 VQTLPVVVISPEQADKGLKCPVCLLEFEELETVREMPCKHLFHSGCILPWLGKTNSCPLC 119
Query: 113 R 113
R
Sbjct: 120 R 120
>gi|170590155|ref|XP_001899838.1| rnf126-prov protein [Brugia malayi]
gi|158592757|gb|EDP31354.1| rnf126-prov protein, putative [Brugia malayi]
Length = 250
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 12 NIVSGSPIIDESFN---LDEALTMITNT---SSTPPDQDQPKSHDGQTNSELTVSSLPTV 65
N++ G PI D ++ LD+ +T + N STP D PK N +TV P
Sbjct: 133 NVLHG-PIADYAWGEGGLDQIVTQLLNQFEGGSTPVD---PKL---LANLPMTVVE-PKH 184
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +CT CME F + + C H+FH CI W+ N+CP+CR V A
Sbjct: 185 IDSGAQCTTCMETFKKDELVAILECQHIFHRECILPWLRRHNTCPICRQTVDA 237
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 42 DQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIST 101
D DQP+ + L+ + A + C+VC+ + + +++PC H +H CI
Sbjct: 539 DDDQPRGLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLPCSHEYHIHCIDR 597
Query: 102 WISLSNSCPVCRSGVI 117
W+S +++CP+CR V+
Sbjct: 598 WLSENSTCPICRRAVL 613
>gi|359486069|ref|XP_002272258.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 282
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR------CTVCMENF 79
L+EA+ +T+ T + Q + + +LP+V T C VC E +
Sbjct: 152 LNEAMEELTHNEVTG-ENTQNDRPGPPPAAPSAIEALPSVRLTPTHLRNDPCCPVCKEEY 210
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+++PC H++H+ CI W+ + NSCPVCR + A
Sbjct: 211 QAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELEA 249
>gi|224028865|gb|ACN33508.1| unknown [Zea mays]
gi|413952408|gb|AFW85057.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 59 VSSLPTV------AATEG-RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCP 110
V++LPTV A +G CT+C+ + + +P CGHVFH C+ TW + S+SCP
Sbjct: 93 VAALPTVLYRDAGGADDGAECTICLGAVQEGELVRALPACGHVFHVPCVDTWFASSSSCP 152
Query: 111 VCRSGV 116
VCR+ V
Sbjct: 153 VCRAEV 158
>gi|22831072|dbj|BAC15934.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50509614|dbj|BAD31444.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 56 ELTVSSLPTVAATEGR-----CTVCMENF-----LQAFPGKQVPCGHVFHATCISTWISL 105
E T+ +LP V E R C VC+E++ L+A P CGH+FH CI TW+
Sbjct: 111 EATLQALPLVLYGEARTAQTSCAVCLESYGGGDVLRALP----ECGHLFHRDCIFTWLRR 166
Query: 106 SNSCPVCR 113
+CPVCR
Sbjct: 167 RPTCPVCR 174
>gi|336267774|ref|XP_003348652.1| hypothetical protein SMAC_01676 [Sordaria macrospora k-hell]
gi|380093910|emb|CCC08126.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 588
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 28 EALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPT------VAATEGR--CTVCMENF 79
EAL I T +D P S+ S+ + LP + EG+ CT+C+++
Sbjct: 266 EALDRIVTTLM----EDNPLSNAAPPASQAAIEKLPKKMLDEQMVGPEGKAECTICIDDM 321
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+ +PC H FH C++ W+ N+CP+CR
Sbjct: 322 YKGDEATVLPCKHWFHGECVALWLKEHNTCPICR 355
>gi|254573534|ref|XP_002493876.1| Ubiquitin-protein ligase [Komagataella pastoris GS115]
gi|238033675|emb|CAY71697.1| Ubiquitin-protein ligase [Komagataella pastoris GS115]
gi|328354303|emb|CCA40700.1| E3 ubiquitin-protein ligase synoviolin [Komagataella pastoris CBS
7435]
Length = 364
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQA-FPGKQVPCGHVFHATCISTWISLSNSCPVC 112
N+EL + L + + +C +C++ K++ C H FH+ CI +W+ +S +CPVC
Sbjct: 295 NNELEDTDLSLMTKVDNKCVICLDRLDSPNRTAKKLRCDHTFHSICIQSWMLVSRNCPVC 354
Query: 113 R 113
R
Sbjct: 355 R 355
>gi|303282389|ref|XP_003060486.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457957|gb|EEH55255.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 316
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 69 EGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ +C VC+ + K++PCGH FH CI TW++ SCPVCR+
Sbjct: 243 DAKCPVCLVDIEIGTTCKRLPCGHRFHDRCIRTWLASKRSCPVCRA 288
>gi|255557042|ref|XP_002519554.1| protein binding protein, putative [Ricinus communis]
gi|223541417|gb|EEF42968.1| protein binding protein, putative [Ricinus communis]
Length = 547
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 65 VAATEGRCTVCMENFLQAFP-GKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
++ EG C +C+E + G CGH +H +CI W+S+ N CP+C++ +A
Sbjct: 488 LSQDEGNCVICLEEYKDMDDVGSLKACGHDYHVSCIKKWLSMKNLCPICKASAMA 542
>gi|74228963|dbj|BAE21950.1| unnamed protein product [Mus musculus]
Length = 154
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 98 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 146
>gi|126305140|ref|XP_001363677.1| PREDICTED: e3 ubiquitin-protein ligase RNF103 [Monodelphis
domestica]
Length = 676
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
C VC+ENF A +PCGHVFH CI W++ + CPVCR
Sbjct: 612 CVVCLENFEHACVLTGLPCGHVFHQNCIIMWLAGGRHCCPVCR 654
>gi|405955299|gb|EKC22466.1| hypothetical protein CGI_10002232 [Crassostrea gigas]
Length = 555
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
T+ SLP+ T+ + C++C+ +F+ +PC H+FH CI W++ S +CPV
Sbjct: 485 TIESLPSNQVTDQQIDDLAPCSICLSSFVVMDTSSHLPCNHLFHLHCIQAWLAKSATCPV 544
Query: 112 CR 113
CR
Sbjct: 545 CR 546
>gi|391340391|ref|XP_003744525.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Metaseiulus
occidentalis]
Length = 392
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 55 SELTVSSLPTVAATE--GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S+L V P+ A + C +C EN A + +PC H+FH TC+ +W+ SCP C
Sbjct: 269 SQLLVGRYPSATADQLDDPCAICWENMHSA---RVLPCRHLFHETCLRSWLEQDISCPTC 325
Query: 113 R 113
R
Sbjct: 326 R 326
>gi|302843575|ref|XP_002953329.1| hypothetical protein VOLCADRAFT_94007 [Volvox carteri f.
nagariensis]
gi|300261426|gb|EFJ45639.1| hypothetical protein VOLCADRAFT_94007 [Volvox carteri f.
nagariensis]
Length = 922
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS----CPVCRSGVI 117
CT+CM+ + KQ+PCGHVFH +C+ W+ S S CP CR ++
Sbjct: 360 CTICMDEIVHV--AKQLPCGHVFHLSCLRAWLQQSGSESFTCPNCRKPIL 407
>gi|242052773|ref|XP_002455532.1| hypothetical protein SORBIDRAFT_03g012760 [Sorghum bicolor]
gi|241927507|gb|EES00652.1| hypothetical protein SORBIDRAFT_03g012760 [Sorghum bicolor]
Length = 195
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 59 VSSLPTVAATEG-----RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN-SCPV 111
V+SLPT A G C VC+ G+ +P CGH FHA C+ W+ + +CP+
Sbjct: 101 VASLPTFVARSGSGAGAECAVCIAELRDGDEGRALPRCGHRFHAACVDAWLRRRHTTCPL 160
Query: 112 CRSGVI 117
CR+ V+
Sbjct: 161 CRASVV 166
>gi|397506628|ref|XP_003823827.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Pan paniscus]
Length = 580
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 225 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 281
Query: 111 VCR 113
CR
Sbjct: 282 TCR 284
>gi|6996315|emb|CAB75509.1| ABI3-interacting protein 2, AIP2 [Arabidopsis thaliana]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V LP + TE C +C EN + +++PC H FH C+ W+
Sbjct: 204 SKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDE 263
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 264 HNSCPICR 271
>gi|5931953|gb|AAD56721.1|AF124144_1 autocrine motility factor receptor [Mus musculus]
Length = 643
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|387018136|gb|AFJ51186.1| RING finger protein 103-like [Crotalus adamanteus]
Length = 672
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTW-ISLSNSCPVCR 113
C VC+ENF+ +PCGHVFH CI W + + CPVCR
Sbjct: 608 CVVCLENFINECLLMGLPCGHVFHQNCIVMWLVGGRHCCPVCR 650
>gi|356528603|ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
Length = 207
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
RC VC + KQ+PC H++H+ CI+ W+ L SCP+CR
Sbjct: 94 RCAVCKDQITPHAEAKQLPCKHLYHSDCITPWLELHASCPLCR 136
>gi|432098704|gb|ELK28283.1| E3 ubiquitin-protein ligase Praja-1 [Myotis davidii]
Length = 581
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++ SLP + TE C +C +++ ++PC H FH C+S W+ S
Sbjct: 508 SKESIDSLPEILVTEDHSAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 567
Query: 107 NSCPVCR 113
+CPVCR
Sbjct: 568 GTCPVCR 574
>gi|402223546|gb|EJU03610.1| zf-UBP-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 667
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 15 SGSPIIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTV 74
+G P D S + + LT+ + + P P++H LT LPT C V
Sbjct: 211 NGRPFQDASPEICKILTIDSVLVTPTPSSQPPEAHPPAPRQVLTGLELPT-------CPV 263
Query: 75 CMENFLQAFPGK-QVPCGHVFHATCISTWISLSNSCPVCRS 114
C++ A G VPC H FH +C+S W + CPVCR+
Sbjct: 264 CLDRMDSALTGLITVPCTHTFHCSCLSRWP--DSRCPVCRA 302
>gi|261332821|emb|CBH15816.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 437
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 59 VSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
V S P V T C +C + + G+Q+ CGH+FH+ C+ W+ + CP CR V
Sbjct: 272 VDSFPEVG-TAADCVICFDPVTDSARGRQLRCGHIFHSRCLRRWLMRAARCPTCRQYV 328
>gi|226528098|ref|NP_001149926.1| ubiquitin-protein ligase CIP8 [Zea mays]
gi|195635521|gb|ACG37229.1| ubiquitin-protein ligase CIP8 [Zea mays]
Length = 161
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
G C +C++ GK++PCGH FH C+ W+ + +CPVCR
Sbjct: 94 GECAICLDAV--EGTGKEMPCGHRFHGRCLERWLGVHGNCPVCRR 136
>gi|195452546|ref|XP_002073401.1| GK13173 [Drosophila willistoni]
gi|194169486|gb|EDW84387.1| GK13173 [Drosophila willistoni]
Length = 619
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|71031078|ref|XP_765181.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352137|gb|EAN32898.1| hypothetical protein TP02_0615 [Theileria parva]
Length = 1138
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C+VC+E + Q +++PC H FH CI TW+ S CP+C+
Sbjct: 172 CSVCLEEYQQGTEIRRLPCTHSFHKNCIDTWLRKSTICPICK 213
>gi|297741510|emb|CBI32642.3| unnamed protein product [Vitis vinifera]
Length = 515
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 55 SELTVSSLPTVAATEG--RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
S +V +LP+V ++G C +C E Q ++PC H+FH CI W+ N+CP C
Sbjct: 171 STASVVALPSVEVSDGGVECVICKEEMRQGRDVCELPCEHLFHWMCILPWLVKRNTCPCC 230
Query: 113 R 113
R
Sbjct: 231 R 231
>gi|226478718|emb|CAX72854.1| Heavy metal transport/detoxification protein,domain-containing
protein [Schistosoma japonicum]
Length = 276
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
G C++C ++F ++ ++PC H++H C++TW+ +CPVCR +
Sbjct: 203 GICSICFDDFKESESVIKLPCAHIYHQNCVTTWLKQHGTCPVCRKDL 249
>gi|226478522|emb|CAX72756.1| Heavy metal transport/detoxification protein,domain-containing
protein [Schistosoma japonicum]
gi|226478680|emb|CAX72835.1| Heavy metal transport/detoxification protein,domain-containing
protein [Schistosoma japonicum]
Length = 276
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
G C++C ++F ++ ++PC H++H C++TW+ +CPVCR +
Sbjct: 203 GICSICFDDFKESESVIKLPCAHIYHQNCVTTWLKQHGTCPVCRKDL 249
>gi|223995979|ref|XP_002287663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976779|gb|EED95106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
A E RC+VC+E + + +PC H FHA+CI W+ CPVC+ I
Sbjct: 267 ANDEHRCSVCLEQYQVGDVVRTIPCFHSFHASCIDPWMREKAECPVCKHSAIG 319
>gi|116780067|gb|ABK21541.1| unknown [Picea sitchensis]
Length = 334
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 19 IIDESFNLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEG-------- 70
II+ +LD A+ + P P S + V+ LP + T+
Sbjct: 199 IINLENDLDSAIEAALQEVGSGPRVPPPASKE-------VVAKLPIIDVTDQVLAGMGKD 251
Query: 71 -RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
C VC E+ + +++PC H+FH C+ W+ NSCP+CR
Sbjct: 252 TECAVCREHLVVGDKMQELPCKHLFHPNCLKPWLDEHNSCPICR 295
>gi|345492634|ref|XP_001600783.2| PREDICTED: E3 ubiquitin-protein ligase HRD1-like [Nasonia
vitripennis]
Length = 584
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMFSA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|326914309|ref|XP_003203468.1| PREDICTED: e3 ubiquitin-protein ligase RNF6-like [Meleagris
gallopavo]
Length = 744
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 68 TEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
TEG C+VC+ ++ +Q+PC H FH CI W+S +++CP+CR V+
Sbjct: 683 TEGEISKTCSVCINEYVAGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLG 737
>gi|307200590|gb|EFN80731.1| E3 ubiquitin-protein ligase HRD1 [Harpegnathos saltator]
Length = 618
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|146103989|ref|XP_001469700.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398024524|ref|XP_003865423.1| hypothetical protein, conserved [Leishmania donovani]
gi|134074070|emb|CAM72812.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503660|emb|CBZ38746.1| hypothetical protein, conserved [Leishmania donovani]
Length = 548
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 62 LPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
P+VAA + C +C+++F+ K +PCGH FH C+ +W+ + CP CR
Sbjct: 293 FPSVAADPTKTCGICLDDFVDGESVKCLPCGHTFHGACVRSWLIRAAVCPTCR 345
>gi|66815575|ref|XP_641804.1| hypothetical protein DDB_G0279345 [Dictyostelium discoideum AX4]
gi|60469834|gb|EAL67821.1| hypothetical protein DDB_G0279345 [Dictyostelium discoideum AX4]
Length = 679
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 25 NLDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFP 84
NL+ +T N D D + G+ + E C +C + + A
Sbjct: 275 NLNRKITAYRNYCKLTSDMDNCYPNVGEKDLE----------NYNDDCAICRDRMVTA-- 322
Query: 85 GKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
K++PCGH+FH +C+ W+ +SCP CR +I
Sbjct: 323 -KKLPCGHIFHHSCLRAWLEQHHSCPTCRRSLI 354
>gi|15227929|ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
gi|68565335|sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName:
Full=RING-H2 finger protein ATL41
gi|4567308|gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|18491287|gb|AAL69468.1| At2g42360/MHK10.8 [Arabidopsis thaliana]
gi|70905063|gb|AAZ14057.1| At2g42360 [Arabidopsis thaliana]
gi|110736438|dbj|BAF00187.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330255017|gb|AEC10111.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
Length = 236
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 57 LTVSSLPTVAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSG 115
TV + VAA+ C VC+ + +++P C H+FH C+ TW++ ++CPVCR+
Sbjct: 93 FTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTE 152
Query: 116 V 116
V
Sbjct: 153 V 153
>gi|380799985|gb|AFE71868.1| RING finger protein 165, partial [Macaca mulatta]
Length = 193
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 137 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 185
>gi|377520133|ref|NP_001243687.1| RING finger protein 165 isoform 2 [Homo sapiens]
gi|410052644|ref|XP_003953329.1| PREDICTED: RING finger protein 165 isoform 1 [Pan troglodytes]
gi|426385861|ref|XP_004059416.1| PREDICTED: RING finger protein 165 [Gorilla gorilla gorilla]
gi|441602936|ref|XP_004087767.1| PREDICTED: RING finger protein 165 [Nomascus leucogenys]
gi|193783761|dbj|BAG53743.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 98 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 146
>gi|392354883|ref|XP_341645.5| PREDICTED: E3 ubiquitin-protein ligase AMFR [Rattus norvegicus]
Length = 758
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+S V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP CR
Sbjct: 438 SSRFAVATAEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCPTCR 494
>gi|332028075|gb|EGI68126.1| E3 ubiquitin-protein ligase HRD1 [Acromyrmex echinatior]
Length = 601
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVTA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|297728851|ref|NP_001176789.1| Os12g0143750 [Oryza sativa Japonica Group]
gi|255670046|dbj|BAH95517.1| Os12g0143750, partial [Oryza sativa Japonica Group]
Length = 131
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 59 VSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+ + A E C VC+++F+ + +PC H FH CI W+ LS CP+CR +
Sbjct: 57 LREVTAAGAREEECAVCLQDFVAEEKLRMMPCSHTFHQRCIFDWLRLSCICPLCRRAL 114
>gi|71653452|ref|XP_815363.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880413|gb|EAN93512.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 619
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V+ +G C++C E+F ++PCGH+F C++ W+ L+ +CP CR
Sbjct: 134 VSEEQGVCSICQESFSTGCEVYRLPCGHMFDVRCLNQWLELTRTCPNCR 182
>gi|330793521|ref|XP_003284832.1| hypothetical protein DICPUDRAFT_53219 [Dictyostelium purpureum]
gi|325085228|gb|EGC38639.1| hypothetical protein DICPUDRAFT_53219 [Dictyostelium purpureum]
Length = 682
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C + + A K++PCGH+FH +C+ W+ +SCP CR +I
Sbjct: 313 CAICRDKMVTA---KKLPCGHIFHHSCLRAWLEQHHSCPTCRRSLI 355
>gi|255645317|gb|ACU23155.1| unknown [Glycine max]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
S+ SL RC +C + + ++PC HV+H CI+ W+S++ CPVC +
Sbjct: 179 SKYKFGSLFKRKNFGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNT 238
Query: 115 GVIA 118
V
Sbjct: 239 EVFG 242
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C+VC+ + +Q+PC H FH CI W+S +++CP+CR V+
Sbjct: 611 CSVCINEYATGNKLRQLPCAHEFHIHCIDRWLSENSTCPICRQPVLG 657
>gi|15221860|ref|NP_173311.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|6730708|gb|AAF27103.1|AC011809_12 Hypothetical protein [Arabidopsis thaliana]
gi|70905057|gb|AAZ14054.1| At1g18760 [Arabidopsis thaliana]
gi|332191639|gb|AEE29760.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 224
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 55 SELTVSSL------PTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
++L V+SL T ++TE RCT+C+E F +PCGH F C+ TW ++
Sbjct: 153 NKLVVNSLARKIYKKTTSSTE-RCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHD 211
Query: 109 CPVCR 113
CP+CR
Sbjct: 212 CPLCR 216
>gi|380025916|ref|XP_003696709.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin A-like isoform 1
[Apis florea]
Length = 601
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|357130924|ref|XP_003567094.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 126
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 55 SELTVSSLPTVAATEGR---CTVCMENFLQAFPGK--QVPCGHVFHATCISTWISLSNSC 109
SE + L A E R C+VCME++ +A + +PCGH FH CI W+ LS C
Sbjct: 50 SERAIEELRKTTAGEAREQGCSVCMEDYFEAEEERIMAMPCGHSFHQRCIFEWLELSCVC 109
Query: 110 PVCR 113
P+ R
Sbjct: 110 PLSR 113
>gi|349604804|gb|AEQ00252.1| E3 ubiquitin-protein ligase Praja1-like protein, partial [Equus
caballus]
Length = 315
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++ SLP + TE C +C +++ ++PC H FH C+S W+ S
Sbjct: 242 SKESIDSLPEILVTEDHSAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 301
Query: 107 NSCPVCR 113
+CPVCR
Sbjct: 302 GTCPVCR 308
>gi|114051776|ref|NP_001039439.1| autocrine motility factor receptor [Bos taurus]
gi|86437966|gb|AAI12458.1| Autocrine motility factor receptor [Bos taurus]
Length = 645
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 322 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 378
Query: 111 VCR 113
CR
Sbjct: 379 TCR 381
>gi|417515398|gb|JAA53530.1| aE3 ubiquitin-protein ligase AMFR [Sus scrofa]
Length = 647
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 324 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 380
Query: 111 VCR 113
CR
Sbjct: 381 TCR 383
>gi|413946374|gb|AFW79023.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 374
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
RC++C E F ++ CGH +H CI W+S N+CPVC++ V
Sbjct: 326 RCSICQEEFEVHEETGKLSCGHSYHVHCIKQWLSRKNACPVCKTTV 371
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Query: 27 DEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGK 86
DE L + PD + + HD Q C +C+ + + +
Sbjct: 249 DEQLAALPRWRFKEPDVPRDREHDDQE------------------CCICLAQYREKEEMR 290
Query: 87 QVPCGHVFHATCISTWISLSNSCPVCR 113
Q+PC H+FH C+ W+ + +SCP+C+
Sbjct: 291 QLPCTHMFHLKCVDRWLRIISSCPLCK 317
>gi|345793914|ref|XP_544395.3| PREDICTED: E3 ubiquitin-protein ligase AMFR [Canis lupus
familiaris]
Length = 576
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 251 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 307
Query: 111 VCR 113
CR
Sbjct: 308 TCR 310
>gi|449016284|dbj|BAM79686.1| unknown zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 564
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+AA + C +C E K++ CGH+FH C+ +W+ S SCP CR +
Sbjct: 290 LAAGDRTCIICREEMFGGAGAKKLVCGHIFHLRCLRSWMERSMSCPTCRRDI 341
>gi|340714598|ref|XP_003395813.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin B-like isoform 2
[Bombus terrestris]
Length = 530
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVSA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|123392850|ref|XP_001300307.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881324|gb|EAX87377.1| hypothetical protein TVAG_024430 [Trichomonas vaginalis G3]
Length = 458
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 41 PDQDQPKSHDGQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCIS 100
P +PKS D S+P +E C +CM N P PCGH FH+ C+
Sbjct: 389 PKSLRPKSFD--------YRSIPIPPNSE--CAICMCNIEDGEPTMMTPCGHPFHSQCLE 438
Query: 101 TWISLSNSCPVCRSGVI 117
W+ CP+CR+ ++
Sbjct: 439 RWMQEQLVCPICRAPLL 455
>gi|5931955|gb|AAD56722.1|AF124145_1 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|417411906|gb|JAA52372.1| Putative e3 ubiquitin-protein ligase, partial [Desmodus rotundus]
Length = 605
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ +QA +++PCGH+FH +C+ +W+ SCP
Sbjct: 279 GNMEARFAVATPEELAVNNDDCAICWDS-MQA--ARKLPCGHLFHNSCLRSWLEQDTSCP 335
Query: 111 VCR 113
CR
Sbjct: 336 TCR 338
>gi|414867620|tpg|DAA46177.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 244
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 72 CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
C +C++ F + + VP CGH++HA CI W+ + NSCPVCR V
Sbjct: 138 CPICLDAFGEDDGVRVVPACGHLYHAPCIDRWLDVRNSCPVCRCAV 183
>gi|149029497|gb|EDL84711.1| similar to ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 281
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 225 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 273
>gi|30686604|ref|NP_850254.1| RING-H2 finger protein ATL70 [Arabidopsis thaliana]
gi|68565230|sp|Q8RX29.1|ATL70_ARATH RecName: Full=RING-H2 finger protein ATL70
gi|20258808|gb|AAM13985.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|21689891|gb|AAM67506.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330254082|gb|AEC09176.1| RING-H2 finger protein ATL70 [Arabidopsis thaliana]
Length = 217
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 56 ELTVSSLPTVAATEGR-------CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN 107
E T+ S P + +E + C +C+ ++ +Q+P C H+FH CI TW+ L+
Sbjct: 124 EDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNP 183
Query: 108 SCPVCRS 114
+CPVCR+
Sbjct: 184 TCPVCRT 190
>gi|348572718|ref|XP_003472139.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Cavia porcellus]
Length = 643
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|296477922|tpg|DAA20037.1| TPA: autocrine motility factor receptor [Bos taurus]
Length = 590
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 322 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 378
Query: 111 VCR 113
CR
Sbjct: 379 TCR 381
>gi|328788401|ref|XP_003251124.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin A-like isoform 2
[Apis mellifera]
Length = 531
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMIAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|322784349|gb|EFZ11323.1| hypothetical protein SINV_06714 [Solenopsis invicta]
Length = 605
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVTA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|413937106|gb|AFW71657.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 226
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 71 RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVIA 118
RCTVC+E + + +P CGH FHATCI W+ +CPVCR+ + A
Sbjct: 101 RCTVCLEEYEAKDVVRVLPACGHAFHATCIDAWLRQHPTCPVCRASLRA 149
>gi|356544176|ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
S+ +L + RC +C + + ++PC HV+H CI+ W+S++ CPVC +
Sbjct: 179 SKYKFGNLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNT 238
Query: 115 GVIA 118
V
Sbjct: 239 EVFG 242
>gi|406602398|emb|CCH46014.1| Tripartite motif-containing protein 5 [Wickerhamomyces ciferrii]
Length = 444
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 72 CTVCMENFLQ----AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSG 115
CT+C++ Q F + PCGH +H CI W SNSCP CR
Sbjct: 8 CTICLDQLFQIDKSEFITRLQPCGHYYHTECIKLWTDKSNSCPTCRRD 55
>gi|242060816|ref|XP_002451697.1| hypothetical protein SORBIDRAFT_04g006170 [Sorghum bicolor]
gi|241931528|gb|EES04673.1| hypothetical protein SORBIDRAFT_04g006170 [Sorghum bicolor]
Length = 387
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S V LP VA ++ C VC + ++PC H FH CI W+++ N+CP
Sbjct: 263 SRAVVDGLPEVALSDEEASHGCAVCKDGIAAGQSVLRLPCRHYFHGECIRPWLAIRNTCP 322
Query: 111 VCR 113
VCR
Sbjct: 323 VCR 325
>gi|357445561|ref|XP_003593058.1| Thioredoxin-related protein [Medicago truncatula]
gi|355482106|gb|AES63309.1| Thioredoxin-related protein [Medicago truncatula]
Length = 315
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
+ +LP V TE C +C + F +++PC H +H+ CI W+ + N+CPVC
Sbjct: 182 IEALPMVKVTETHLASDPNCPICKDEFEVDVQVRELPCKHFYHSDCILPWLQMHNTCPVC 241
Query: 113 RSGV 116
R +
Sbjct: 242 RHEL 245
>gi|4521317|dbj|BAA34912.2| KF-1 [Mus musculus]
Length = 683
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 28 EALTMITNTSSTPPDQDQPK--SHDGQTNSELTVSSLP--TVAATEGRCTVCMENFLQAF 83
EA + S+P ++ + SH+ + E + P T+ TE C VC+ENF
Sbjct: 573 EACSCANKCESSPCERKRRSYGSHNTDEDMEPDWLTWPAGTLHCTE--CVVCLENFENGC 630
Query: 84 PGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
+PCGHVFH CI W++ + CPVCR
Sbjct: 631 LLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 661
>gi|383863977|ref|XP_003707456.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin A-like [Megachile
rotundata]
Length = 586
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|332375312|gb|AEE62797.1| unknown [Dendroctonus ponderosae]
Length = 296
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 71 RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+C+VC E+F +Q+PC H++H CI W+ L +CP+CR +
Sbjct: 186 QCSVCWEHFTVKEQVRQLPCLHIYHEGCIRPWLELHGTCPICRQNL 231
>gi|242019942|ref|XP_002430417.1| Autocrine motility factor receptor, putative [Pediculus humanus
corporis]
gi|212515547|gb|EEB17679.1| Autocrine motility factor receptor, putative [Pediculus humanus
corporis]
Length = 549
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 59 VSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
++S + A + C +C E A +++PCGH+FH +C+ +W+ SCP CR+
Sbjct: 328 MASEEELMAHKDNCAICWEEMDSA---RKLPCGHLFHNSCLQSWLEQDTSCPTCRT 380
>gi|187960114|ref|NP_033569.2| E3 ubiquitin-protein ligase RNF103 [Mus musculus]
gi|341941984|sp|Q9R1W3.2|RN103_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF103; AltName:
Full=KF-1; Short=mKF-1; AltName: Full=RING finger
protein 103; AltName: Full=Zinc finger protein 103;
Short=Zfp-103
gi|223460613|gb|AAI37625.1| Rnf103 protein [Mus musculus]
Length = 683
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 28 EALTMITNTSSTPPDQDQPK--SHDGQTNSELTVSSLP--TVAATEGRCTVCMENFLQAF 83
EA + S+P ++ + SH+ + E + P T+ TE C VC+ENF
Sbjct: 573 EACSCANKCESSPCERKRRSYGSHNTDEDMEPDWLTWPAGTLHCTE--CVVCLENFENGC 630
Query: 84 PGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
+PCGHVFH CI W++ + CPVCR
Sbjct: 631 LLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 661
>gi|2058263|dbj|BAA19795.1| mkf-1 [Mus musculus]
Length = 683
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 28 EALTMITNTSSTPPDQDQPK--SHDGQTNSELTVSSLP--TVAATEGRCTVCMENFLQAF 83
EA + S+P ++ + SH+ + E + P T+ TE C VC+ENF
Sbjct: 573 EACSCANKCESSPCERKRRSYGSHNTDEDMEPDWLTWPAGTLHCTE--CVVCLENFENGC 630
Query: 84 PGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
+PCGHVFH CI W++ + CPVCR
Sbjct: 631 LLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 661
>gi|195113273|ref|XP_002001192.1| GI22108 [Drosophila mojavensis]
gi|193917786|gb|EDW16653.1| GI22108 [Drosophila mojavensis]
Length = 635
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|431914137|gb|ELK15396.1| Autocrine motility factor receptor [Pteropus alecto]
Length = 563
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 240 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 296
Query: 111 VCR 113
CR
Sbjct: 297 TCR 299
>gi|21071001|ref|NP_001135.3| E3 ubiquitin-protein ligase AMFR [Homo sapiens]
gi|34922250|sp|Q9UKV5.2|AMFR_HUMAN RecName: Full=E3 ubiquitin-protein ligase AMFR; AltName:
Full=Autocrine motility factor receptor; Short=AMF
receptor; AltName: Full=RING finger protein 45; AltName:
Full=gp78
gi|46623045|gb|AAH69197.1| Autocrine motility factor receptor [Homo sapiens]
gi|410214176|gb|JAA04307.1| autocrine motility factor receptor [Pan troglodytes]
gi|410267058|gb|JAA21495.1| autocrine motility factor receptor [Pan troglodytes]
gi|410302714|gb|JAA29957.1| autocrine motility factor receptor [Pan troglodytes]
gi|410334683|gb|JAA36288.1| autocrine motility factor receptor [Pan troglodytes]
gi|410334685|gb|JAA36289.1| autocrine motility factor receptor [Pan troglodytes]
Length = 643
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|402908437|ref|XP_003916947.1| PREDICTED: E3 ubiquitin-protein ligase AMFR-like [Papio anubis]
Length = 468
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|395839566|ref|XP_003792659.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Otolemur garnettii]
Length = 677
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 354 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 410
Query: 111 VCR 113
CR
Sbjct: 411 TCR 413
>gi|380811708|gb|AFE77729.1| autocrine motility factor receptor [Macaca mulatta]
gi|383417493|gb|AFH31960.1| autocrine motility factor receptor [Macaca mulatta]
gi|384940016|gb|AFI33613.1| autocrine motility factor receptor [Macaca mulatta]
Length = 643
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|297812277|ref|XP_002874022.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319859|gb|EFH50281.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 310
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 67 ATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
E C +C EN + +++PC H FH C+ W+ NSCP+CR
Sbjct: 225 GAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICR 271
>gi|296231111|ref|XP_002761010.1| PREDICTED: E3 ubiquitin-protein ligase AMFR [Callithrix jacchus]
Length = 643
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|380025918|ref|XP_003696710.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin A-like isoform 2
[Apis florea]
Length = 531
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVAA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|350411181|ref|XP_003489265.1| PREDICTED: E3 ubiquitin-protein ligase HRD1-like [Bombus impatiens]
Length = 601
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVSA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|145533104|ref|XP_001452302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419990|emb|CAK84905.1| unnamed protein product [Paramecium tetraurelia]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 55 SELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
S+ + SL + CTVC E + Q+ Q+PC H FH C+ W+ NSCPVCR
Sbjct: 129 SQSAIDSLQKINLQSECCTVCQEEY-QSQQALQMPCQHHFHPDCLIPWLKQHNSCPVCRF 187
Query: 115 GVI 117
++
Sbjct: 188 ELV 190
>gi|388491378|gb|AFK33755.1| unknown [Medicago truncatula]
Length = 280
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S ++ ++PT+ T+ C +C+E F +++ C H++H+ CI W+ NS
Sbjct: 167 SRSSIEAMPTIKITQAHLHSDSHCPICIERFELGSKAREMACKHIYHSDCIVPWLIQHNS 226
Query: 109 CPVCR 113
CPVCR
Sbjct: 227 CPVCR 231
>gi|340714596|ref|XP_003395812.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin B-like isoform 1
[Bombus terrestris]
Length = 601
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 65 VAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+AA + C +C E + A K++PC H+FH C+ +W +CP CR ++
Sbjct: 283 LAAADNVCIICREEMVSA--SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNIL 333
>gi|224053875|ref|XP_002298023.1| predicted protein [Populus trichocarpa]
gi|222845281|gb|EEE82828.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 56 ELTVSSLPTVAATEGR-CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
EL+ S P V+ATE C +C+E + P C H FH +CI W+ S SCPVC
Sbjct: 144 ELSKSVEPLVSATEEEDCPICLEEYDLENPKLITKCEHHFHLSCILEWMERSESCPVCDK 203
Query: 115 GVI 117
VI
Sbjct: 204 EVI 206
>gi|356522954|ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
Length = 359
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 66 AATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPVCRSGVIA 118
AA G C VC+ F + +P C H FHA CI TW+ + SCP+CRS ++A
Sbjct: 133 AAVSGDCAVCLSKFHHHDLLRLLPLCCHAFHAECIDTWLQSNLSCPLCRSTIVA 186
>gi|148677515|gb|EDL09462.1| mCG18269 [Mus musculus]
Length = 280
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 224 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 27 DEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATEGR-----CTVCMENFLQ 81
D+ + I + PDQ+ K ++ Q N+ SS+P+ A E C++C+E ++
Sbjct: 194 DDLIERIPSYIFVQPDQNLAK-NELQENTR--QSSVPSFAPKENEDTAMSCSICLEAYVD 250
Query: 82 AFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
+ +PC H FH+ C+ W+ CP+C+ ++
Sbjct: 251 GEQLRVLPCMHQFHSLCVDKWLRRYARCPICKFAIL 286
>gi|195505542|ref|XP_002099550.1| GE10965 [Drosophila yakuba]
gi|194185651|gb|EDW99262.1| GE10965 [Drosophila yakuba]
Length = 623
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|149755667|ref|XP_001504922.1| PREDICTED: e3 ubiquitin-protein ligase Praja-1 [Equus caballus]
Length = 446
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++ SLP + TE C +C +++ ++PC H FH C+S W+ S
Sbjct: 373 SKESIDSLPEILVTEDHSAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 432
Query: 107 NSCPVCR 113
+CPVCR
Sbjct: 433 GTCPVCR 439
>gi|157107063|ref|XP_001649607.1| synoviolin [Aedes aegypti]
gi|108879670|gb|EAT43895.1| AAEL004697-PA [Aedes aegypti]
Length = 606
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 290 CIICREDMVSN--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 333
>gi|351698642|gb|EHB01561.1| E3 ubiquitin-protein ligase Praja1 [Heterocephalus glaber]
Length = 647
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 58 TVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSC 109
++ SLP + TE C +C +++ ++PC H FH C+S W+ S +C
Sbjct: 577 SIDSLPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 636
Query: 110 PVCR 113
PVCR
Sbjct: 637 PVCR 640
>gi|327303672|ref|XP_003236528.1| hypothetical protein TERG_03569 [Trichophyton rubrum CBS 118892]
gi|326461870|gb|EGD87323.1| hypothetical protein TERG_03569 [Trichophyton rubrum CBS 118892]
Length = 453
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 59 VSSLPTV--------AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
+ SLP V + + C++CM+N +PC H FH +CI+ W++ ++CP
Sbjct: 289 IRSLPKVKVDKSMLGSENKAECSICMDNVELDTEVTMLPCKHWFHESCITAWLNEHDTCP 348
Query: 111 VCRSGVIA 118
CR G++A
Sbjct: 349 HCRQGIMA 356
>gi|313241203|emb|CBY33486.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 59 VSSLPTVAATEG----RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
+ LPT E C VCM++ Q +++PC H+ H+ CI W+ +N CP C+
Sbjct: 152 IEQLPTQKLREAFKKYNCPVCMDDLAQEDQVRRLPCLHILHSDCIDPWLKDNNECPTCKF 211
Query: 115 GV 116
+
Sbjct: 212 DI 213
>gi|431899748|gb|ELK07699.1| RING finger protein 103 [Pteropus alecto]
Length = 695
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
C VC+ENF +PCGHVFH CI+ W++ + CPVCR
Sbjct: 631 CVVCLENFENGCLLMGLPCGHVFHQNCIAMWLAGGRHCCPVCR 673
>gi|28571958|ref|NP_651894.3| septin interacting protein 3, isoform A [Drosophila melanogaster]
gi|442622099|ref|NP_001263152.1| septin interacting protein 3, isoform B [Drosophila melanogaster]
gi|75019758|sp|Q95SP2.1|HRD1_DROME RecName: Full=E3 ubiquitin-protein ligase HRD1; AltName:
Full=Septin-interacting protein 3; AltName:
Full=Synoviolin; Flags: Precursor
gi|16768012|gb|AAL28225.1| GH11117p [Drosophila melanogaster]
gi|28381523|gb|AAF57196.2| septin interacting protein 3, isoform A [Drosophila melanogaster]
gi|220952580|gb|ACL88833.1| sip3-PA [synthetic construct]
gi|440218119|gb|AGB96530.1| septin interacting protein 3, isoform B [Drosophila melanogaster]
Length = 626
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|255550245|ref|XP_002516173.1| zinc finger protein, putative [Ricinus communis]
gi|223544659|gb|EEF46175.1| zinc finger protein, putative [Ricinus communis]
Length = 303
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 55 SELTVSSLPTVAATE---------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISL 105
S+ V+ LP + T+ C +C EN + +++PC H FH C+ W+
Sbjct: 197 SKEVVAKLPVITLTQEILAKLGQDAECAICKENLVVDDKMQELPCKHTFHPPCLKPWLDE 256
Query: 106 SNSCPVCR 113
NSCP+CR
Sbjct: 257 HNSCPICR 264
>gi|297597794|ref|NP_001044543.2| Os01g0802000 [Oryza sativa Japonica Group]
gi|55296323|dbj|BAD68141.1| putative ring finger protein 126 isoform 1 [Oryza sativa Japonica
Group]
gi|215737081|dbj|BAG96010.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673784|dbj|BAF06457.2| Os01g0802000 [Oryza sativa Japonica Group]
Length = 329
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA------ATEGRCTVCMENF 79
L E L + N PP P+S + S+P V + C VC + F
Sbjct: 152 LFEQLLLHNNRQGPPP---APQS---------AIDSMPVVKINLRHLRDDPHCPVCTDKF 199
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++HA CI W+ NSCPVCR
Sbjct: 200 EVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCR 233
>gi|324506713|gb|ADY42859.1| E3 ubiquitin-protein ligase hrd-1 [Ascaris suum]
Length = 628
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C +C E K++PC H+FH+ C+ +W SCP CR+ ++A
Sbjct: 293 CIICREEMTPTSGAKKLPCNHIFHSNCLRSWFQRQQSCPTCRTDILA 339
>gi|297853254|ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297340350|gb|EFH70767.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 59 VSSLPTVAATEG-RCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
V +L TV + +C+VC+++F K +PC H FH C+ W+ + +SCPVCR
Sbjct: 209 VEALGTVKIEDTLQCSVCLDDFEIGTEAKLMPCEHKFHGDCLLPWLEIHSSCPVCR 264
>gi|224136726|ref|XP_002322400.1| predicted protein [Populus trichocarpa]
gi|222869396|gb|EEF06527.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 58 TVSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPV 111
+ +LP V TE C VC E F ++PC H++H+ CI W++L N+CPV
Sbjct: 11 AIEALPVVKITEQHLMNDMHCPVCKEIFEVGGDVMELPCKHLYHSDCIVRWLNLHNTCPV 70
Query: 112 CR 113
CR
Sbjct: 71 CR 72
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+ + + +++PC H +H CI W+S +++CP+CR V+
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>gi|432102457|gb|ELK30034.1| E3 ubiquitin-protein ligase RNF103 [Myotis davidii]
Length = 686
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
C VC+ENF +PCGHVFH CI+ W++ + CPVCR
Sbjct: 622 CVVCLENFENGCLLMGLPCGHVFHQNCIAMWLAGGRHCCPVCR 664
>gi|387592181|gb|EIJ87205.1| hypothetical protein NEQG_02540 [Nematocida parisii ERTm3]
gi|387597476|gb|EIJ95096.1| hypothetical protein NEPG_00621 [Nematocida parisii ERTm1]
Length = 356
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWIS-LSNSCPVCRSGV 116
C +C E FL A + +PC H++H CI TW+ SN CP C+S V
Sbjct: 298 CVICFEQFLPASNCRLLPCNHIYHVECIDTWLKQYSNRCPYCQSLV 343
>gi|195390795|ref|XP_002054053.1| GJ24224 [Drosophila virilis]
gi|194152139|gb|EDW67573.1| GJ24224 [Drosophila virilis]
Length = 632
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|226509565|ref|NP_001141684.1| uncharacterized protein LOC100273811 [Zea mays]
gi|194705540|gb|ACF86854.1| unknown [Zea mays]
gi|195645758|gb|ACG42347.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 386
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 55 SELTVSSLPTVAATEGR----CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
S V LP VA ++ C VC + + ++PC H FH CI W+++ N+CP
Sbjct: 257 SRAVVDGLPEVALSDQEASHGCAVCKDAVVAGQSVLRLPCNHYFHGECIRPWLAIRNTCP 316
Query: 111 VCR 113
VCR
Sbjct: 317 VCR 319
>gi|50284539|ref|NP_032879.2| E3 ubiquitin-protein ligase Praja-1 isoform 2 [Mus musculus]
gi|50234114|gb|AAC00205.2| PRAJA1 [Mus musculus]
Length = 395
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 55 SELTVSSLPTVAATEGR--------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS 106
S+ ++ +LP + TE C +C +++ ++PC H FH C+S W+ S
Sbjct: 322 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 381
Query: 107 NSCPVCR 113
+CPVCR
Sbjct: 382 GTCPVCR 388
>gi|297849826|ref|XP_002892794.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338636|gb|EFH69053.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 SELTVSSLPTVAATE------GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNS 108
S+ V ++P V E G C +C+E + + ++PC H FH+ C+ W+ + +
Sbjct: 80 SKSAVENMPRVVIGEDKEKDGGSCAICLEEWSKGDVATEMPCKHKFHSKCVEEWLGMHAT 139
Query: 109 CPVCR 113
CP+CR
Sbjct: 140 CPMCR 144
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+ + + +++PC H +H CI W+S +++CP+CR V+
Sbjct: 697 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 742
>gi|195575380|ref|XP_002105657.1| GD21603 [Drosophila simulans]
gi|194201584|gb|EDX15160.1| GD21603 [Drosophila simulans]
Length = 626
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|195354518|ref|XP_002043744.1| GM16451 [Drosophila sechellia]
gi|194128944|gb|EDW50987.1| GM16451 [Drosophila sechellia]
Length = 626
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C +C E+ + K++PCGH+FH TC+ +W +CP CR ++
Sbjct: 289 CIICREDMVNH--SKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
>gi|56784967|dbj|BAD82497.1| RING-H2 finger protein RHG1a-like [Oryza sativa Japonica Group]
Length = 351
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
SS E +C++C E F ++ CGH +H CI W+S N CPVC++ V
Sbjct: 292 SSFRYSTEMEKKCSICQEEFEANEEMGRLDCGHSYHVYCIKQWLSQKNVCPVCKTAV 348
>gi|291230244|ref|XP_002735082.1| PREDICTED: autocrine motility factor receptor-like [Saccoglossus
kowalevskii]
Length = 863
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 60 SSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
+S +AA + C +C + A +++PCGH+FH +C+ +W+ SCP CR+ +
Sbjct: 441 ASAEELAANDDDCAICWDRMASA---RKLPCGHLFHNSCLRSWLEHDTSCPTCRTSL 494
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVI 117
C+VC+ + + +++PC H +H CI W+S +++CP+CR V+
Sbjct: 771 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 816
>gi|407920977|gb|EKG14150.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 585
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 70 GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
G C++CM+ ++PCGH FH CI W+ ++CP CR G+
Sbjct: 328 GECSICMDEVPIGEEVTELPCGHWFHGQCIEAWLREHDTCPHCRKGI 374
>gi|397520252|ref|XP_003830238.1| PREDICTED: RING finger protein 165 [Pan paniscus]
Length = 279
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 223 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 271
>gi|242089661|ref|XP_002440663.1| hypothetical protein SORBIDRAFT_09g004760 [Sorghum bicolor]
gi|241945948|gb|EES19093.1| hypothetical protein SORBIDRAFT_09g004760 [Sorghum bicolor]
Length = 538
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 60 SSLPTVAATE-GRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRS 114
SS T TE RC +C+E++ ++ CGH +HA CI W+ + N+CPVC++
Sbjct: 473 SSARTHGDTESARCVICLEDYKFKDSIGKLKCGHDYHADCIKKWLQVKNACPVCKA 528
>gi|125557300|gb|EAZ02836.1| hypothetical protein OsI_24966 [Oryza sativa Indica Group]
Length = 122
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 56 ELTVSSLPTVAATEGR-----CTVCMENF-----LQAFPGKQVPCGHVFHATCISTWISL 105
E T+ +LP V E R C VC+E++ L+A P CGH+FH CI TW+
Sbjct: 41 EATLQALPLVLYGEARTAQTCCAVCLESYGGGDVLRALP----ECGHLFHRDCIFTWLRR 96
Query: 106 SNSCPVCR 113
+CPVCR
Sbjct: 97 RPTCPVCR 104
>gi|119621879|gb|EAX01474.1| ring finger protein 165, isoform CRA_a [Homo sapiens]
Length = 262
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 206 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 254
>gi|356497359|ref|XP_003517528.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Glycine
max]
Length = 554
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 54 NSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
N ++L + A++ C +C E A K++ CGH+FH C+ +W+ ++CP CR
Sbjct: 273 NDRFPDATLEELNASDATCIICREEMTTA---KKLVCGHLFHVHCLRSWLERQHTCPTCR 329
Query: 114 SGVI 117
+ V+
Sbjct: 330 ALVV 333
>gi|348583071|ref|XP_003477298.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RNF6-like [Cavia porcellus]
Length = 641
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
C+VC+ +++ +Q+PC H FH CI W+S + +CP+CR V A
Sbjct: 587 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVYA 633
>gi|344248155|gb|EGW04259.1| RING finger protein 165 [Cricetulus griseus]
Length = 280
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 224 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|226505306|ref|NP_001149786.1| LOC100283413 [Zea mays]
gi|195634655|gb|ACG36796.1| RHC1A [Zea mays]
gi|224031911|gb|ACN35031.1| unknown [Zea mays]
gi|238007022|gb|ACR34546.1| unknown [Zea mays]
gi|413955730|gb|AFW88379.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413955731|gb|AFW88380.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 292
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 25 NLDEALTMIT-NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE------GRCTVCME 77
LD+ + +T N PP ++ ++ ++PTV T+ C +C E
Sbjct: 149 GLDDLIEQLTQNDRRGPP-----------PAAQSSIDAMPTVKITQRHLSGDSHCPICKE 197
Query: 78 NF-LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
F + + +++PC H++H+ CI W+ NSCPVCR
Sbjct: 198 KFEMGSEEAREMPCKHLYHSDCIVPWLEQHNSCPVCR 234
>gi|15226289|ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName: Full=RING-H2 finger protein ATL57
gi|4510422|gb|AAD21508.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|26452105|dbj|BAC43142.1| putative RING finger protein [Arabidopsis thaliana]
gi|28950793|gb|AAO63320.1| At2g27940 [Arabidopsis thaliana]
gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
Length = 237
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 59 VSSLPTVAATEG------RCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSNSCPV 111
V SLP T+ C +C+ +F + K +P CGHVFH C+ TW+S +CP+
Sbjct: 121 VRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPL 180
Query: 112 CRS 114
CRS
Sbjct: 181 CRS 183
>gi|312077126|ref|XP_003141166.1| rnf126-prov protein [Loa loa]
gi|307763668|gb|EFO22902.1| hypothetical protein LOAG_05581 [Loa loa]
Length = 255
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 12 NIVSGSPIIDESFN---LDEALTMITNT---SSTPPDQDQPKSHDGQTNSELTVSSLPTV 65
N++ G P+ D ++ LD+ +T + N STP D PK N +TV P
Sbjct: 138 NVLHG-PVADYAWGEGGLDQIVTQLLNQFEGGSTPVD---PKL---LANLPMTVVE-PKH 189
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +CT CME F + + C H+FH CI W+ N+CP+CR V A
Sbjct: 190 IDSGAQCTTCMETFKKDELVAILECQHIFHRECILPWLRRHNTCPICRQTVDA 242
>gi|222618465|gb|EEE54597.1| hypothetical protein OsJ_01814 [Oryza sativa Japonica Group]
Length = 338
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 26 LDEALTMITNTSSTPPDQDQPKSHDGQTNSELTVSSLPTVA------ATEGRCTVCMENF 79
L E L + N PP P+S + S+P V + C VC + F
Sbjct: 161 LFEQLLLHNNRQGPPP---APQS---------AIDSMPVVKINLRHLRDDPHCPVCTDKF 208
Query: 80 LQAFPGKQVPCGHVFHATCISTWISLSNSCPVCR 113
+++PC H++HA CI W+ NSCPVCR
Sbjct: 209 EVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCR 242
>gi|393911472|gb|EJD76322.1| hypothetical protein, variant [Loa loa]
Length = 248
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 12 NIVSGSPIIDESFN---LDEALTMITNT---SSTPPDQDQPKSHDGQTNSELTVSSLPTV 65
N++ G P+ D ++ LD+ +T + N STP D PK N +TV P
Sbjct: 131 NVLHG-PVADYAWGEGGLDQIVTQLLNQFEGGSTPVD---PKL---LANLPMTVVE-PKH 182
Query: 66 AATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGVIA 118
+ +CT CME F + + C H+FH CI W+ N+CP+CR V A
Sbjct: 183 IDSGAQCTTCMETFKKDELVAILECQHIFHRECILPWLRRHNTCPICRQTVDA 235
>gi|356516041|ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 385
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 58 TVSSLPTVAATEGR---------CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN 107
T+ S P + E R C++C+ ++ K +P CGH FHA CI W+ L+
Sbjct: 304 TIESYPKIVLGENRGLPKKGDKTCSICLSEYIPKETVKTIPECGHCFHAQCIDEWLPLNA 363
Query: 108 SCPVCRS 114
SCP+CR+
Sbjct: 364 SCPICRT 370
>gi|119621880|gb|EAX01475.1| ring finger protein 165, isoform CRA_b [Homo sapiens]
Length = 260
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 68 TEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVCRSGV 116
T+ +CT+C+ +++PC H+FH C+ W+++S CP+CR +
Sbjct: 204 TDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 252
>gi|395747851|ref|XP_003778672.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase AMFR
[Pongo abelii]
Length = 699
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 344 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 400
Query: 111 VCR 113
CR
Sbjct: 401 TCR 403
>gi|297810199|ref|XP_002872983.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318820|gb|EFH49242.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 494
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 59 VSSLPTVAATEGR------CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCPVC 112
V +LP V E C +C E F + Q+PC H++HA CI W+S NSCP+C
Sbjct: 332 VRTLPRVIIGEEHVMKGLVCAICKELFTLSNETTQLPCLHLYHAHCIVPWLSARNSCPLC 391
Query: 113 R 113
R
Sbjct: 392 R 392
>gi|291390148|ref|XP_002711572.1| PREDICTED: autocrine motility factor receptor [Oryctolagus
cuniculus]
Length = 643
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 51 GQTNSELTVSSLPTVAATEGRCTVCMENFLQAFPGKQVPCGHVFHATCISTWISLSNSCP 110
G + V++ +A C +C ++ A +++PCGH+FH +C+ +W+ SCP
Sbjct: 320 GNMEARFAVATPEELAVNNDDCAICWDSMQAA---RKLPCGHLFHNSCLRSWLEQDTSCP 376
Query: 111 VCR 113
CR
Sbjct: 377 TCR 379
>gi|441642974|ref|XP_003268829.2| PREDICTED: E3 ubiquitin-protein ligase RNF103 isoform 1 [Nomascus
leucogenys]
Length = 685
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 72 CTVCMENFLQAFPGKQVPCGHVFHATCISTWISLS-NSCPVCR 113
C VC+ENF +PCGHVFH CI+ W++ + CPVCR
Sbjct: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIAMWLAGGRHCCPVCR 663
>gi|255647206|gb|ACU24071.1| unknown [Glycine max]
Length = 385
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 58 TVSSLPTVAATEGR---------CTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN 107
T+ S P + E R C++C+ ++ K +P CGH FHA CI W+ L+
Sbjct: 304 TIESYPKIVLGENRGLPKKGDKTCSICLSEYIPKETVKTIPECGHCFHAQCIDEWLPLNA 363
Query: 108 SCPVCRS 114
SCP+CR+
Sbjct: 364 SCPICRT 370
>gi|15227928|ref|NP_181764.1| RING-H2 finger protein ATL40 [Arabidopsis thaliana]
gi|68565336|sp|Q9SLC4.1|ATL40_ARATH RecName: Full=RING-H2 finger protein ATL40
gi|4567307|gb|AAD23718.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|38566660|gb|AAR24220.1| At2g42350 [Arabidopsis thaliana]
gi|40824201|gb|AAR92359.1| At2g42350 [Arabidopsis thaliana]
gi|330255016|gb|AEC10110.1| RING-H2 finger protein ATL40 [Arabidopsis thaliana]
Length = 217
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 57 LTVSSLPT--------VAATEGRCTVCMENFLQAFPGKQVP-CGHVFHATCISTWISLSN 107
L ++SLPT VA TE C VC+ + + +P C HVFH +C+ TW++ +
Sbjct: 79 LVIASLPTFVVGIKNDVAGTE--CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQS 136
Query: 108 SCPVCRS 114
+CPVCR+
Sbjct: 137 TCPVCRT 143
>gi|413922462|gb|AFW62394.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 235
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 35 NTSSTPPDQDQPKSHDGQTNSELTVSSLPTVAATE-------GR---CTVCMENFLQAFP 84
+ + T D + + D + V++LP +A TE G C+VC+++F
Sbjct: 143 DMAPTLADMFETGAADAKGMPAAAVAALPIMAFTEHTVADASGEPIGCSVCLQDFEAGET 202
Query: 85 GKQVP-CGHVFHATCISTWISLSNSCPVCRSGV 116
+ +P CGH FH CI W+ SCP+CR V
Sbjct: 203 ARSLPECGHTFHLPCIDVWLLRHASCPLCRRAV 235
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.128 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,916,371,081
Number of Sequences: 23463169
Number of extensions: 68580564
Number of successful extensions: 209182
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10246
Number of HSP's successfully gapped in prelim test: 5429
Number of HSP's that attempted gapping in prelim test: 197238
Number of HSP's gapped (non-prelim): 16265
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)