BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033506
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 OS=Danio rerio GN=ccdc75
PE=2 SV=1
Length = 262
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 10 AAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIEAL 69
++I S N GF LL+K G+K G GLG GR+EP+ ++K ++ GIG E+VK+ K E L
Sbjct: 66 SSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIGMEEVKKRKADEEL 125
Query: 70 EAESK--NEKEKPPKKSKASKRMRKMLELERR 99
+ + + K+ KKS R+RK E E R
Sbjct: 126 QNYRRKVHMKQHLEKKSIEDFRVRKRTEREER 157
>sp|Q6C233|SQS1_YARLI Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 812
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 34/56 (60%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
GE + + AI SNIG LL+K GW G GLG +G EPI VK +KRGIGA
Sbjct: 757 GEIVGHEAPAIDDSNIGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGIGA 812
>sp|A2A6A1|GPTC8_MOUSE G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8
PE=2 SV=1
Length = 1505
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIG 56
I S NIG +LL+KHGWK G GLG + QGR +PI VK + G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82
>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8
PE=1 SV=2
Length = 1502
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIG 56
I S NIG +LL+KHGWK G GLG + QGR +PI VK + G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82
>sp|Q09655|GPAN1_CAEEL G patch domain and ankyrin repeat-containing protein 1 homolog
OS=Caenorhabditis elegans GN=ZK1320.7 PE=4 SV=3
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 8 SSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKV 60
S I SNIG++L+ GW E GLG G+ PIRT +K+N+ G+GAEK+
Sbjct: 257 SGIQIGPSNIGYRLMCASGWTEEQGLGRNSDGQRFPIRTILKRNRAGLGAEKL 309
>sp|Q2KI19|CCD75_BOVIN Coiled-coil domain-containing protein 75 OS=Bos taurus GN=CCDC75
PE=2 SV=2
Length = 260
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 7 GSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPI 66
G A+ N GF LL+K G+K G LG + G +EPI +VK K GIG E + + K
Sbjct: 62 GLKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHETLLKRKAE 121
Query: 67 EALEAESKNEKEKPPKKSKASKRMRKMLELERRLQETEFDRAFRR 111
E LE+ + K + +A+++ R + L+ + E + + RR
Sbjct: 122 EKLESYRRKIHMKSQAEERAAEQFR--IRLKNKQDEMKLEGDLRR 164
>sp|Q9V7A7|GPAN1_DROME G patch domain and ankyrin repeat-containing protein 1 homolog
OS=Drosophila melanogaster GN=CG8152 PE=2 SV=1
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEK 59
I++ N G QL+ K GW + GLG ++ GRL P++T ++K + G+G E+
Sbjct: 238 ISAKNRGLQLMVKQGWDQEHGLGPSQSGRLYPVKTVLRKQRTGLGIEQ 285
>sp|Q6DF57|CCD75_XENTR Coiled-coil domain-containing protein 75 OS=Xenopus tropicalis
GN=ccdc75 PE=2 SV=1
Length = 261
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 11 AITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIEALE 70
A+ + N GF LL+K G+K+G LG G +EPI ++K + GIG E++K+ K E LE
Sbjct: 67 ALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGIGHEEMKKRKAEENLE 126
Query: 71 A 71
+
Sbjct: 127 S 127
>sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein
OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1
Length = 443
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 10 AAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRT-HVKKNKRGIGA 57
A I + N+G +LL K GWKEG G+G + +G +PI VK N G+GA
Sbjct: 356 AKIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGVGA 404
>sp|Q8N954|CCD75_HUMAN Coiled-coil domain-containing protein 75 OS=Homo sapiens GN=CCDC75
PE=1 SV=3
Length = 259
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 7 GSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPI 66
G A+ N GF LL+K G+K G LG + G +EPI ++K K GIG E + K
Sbjct: 62 GLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLKRKAE 121
Query: 67 EALEAESKNEKEKPPKKSKASKRMRKMLELERRLQETEFDRAFRR 111
E LE+ K K + KA+++ R + L+ + E + + RR
Sbjct: 122 EKLESYRKKIHMKNQAEEKAAEQFR--MRLKNKQDEMKLEGDLRR 164
>sp|Q8IX01|SUGP2_HUMAN SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2
PE=1 SV=2
Length = 1082
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 4 ELSGSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAE 58
+L + +T N+GFQ+L+K GWKEG GLG +G EP+ G+GA+
Sbjct: 1001 DLDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGAD 1055
>sp|Q8CH09|SUGP2_MOUSE SURP and G-patch domain-containing protein 2 OS=Mus musculus GN=Sugp2
PE=2 SV=2
Length = 1067
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAE 58
+T N+GFQ+L+K GWKEG GLG +G EP+ G+GA+
Sbjct: 994 LTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGAD 1040
>sp|Q3UFS4|CCD75_MOUSE Coiled-coil domain-containing protein 75 OS=Mus musculus GN=Ccdc75
PE=2 SV=2
Length = 262
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 7 GSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPI 66
G A+ N GF LL+K G+K G LG + G +EPI +VK K GIG E + K
Sbjct: 62 GLKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHESSLKRKAE 121
Query: 67 EALEAESKNEKEKPPKKSKASKRMRKML 94
E LE + K ++KA++ R L
Sbjct: 122 ERLENYRRKIHMKNQNEAKAAEEFRMRL 149
>sp|O95872|GPAN1_HUMAN G patch domain and ankyrin repeat-containing protein 1 OS=Homo
sapiens GN=GPANK1 PE=1 SV=1
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIE--AL 69
+ S+ GF+LL + GW+ G GLG +GR PI T +K+++ G+G +P+ A
Sbjct: 253 VPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRSAPQPRVTHFPAW 312
Query: 70 EAESKNEKEKPPKKSKAS 87
+ + +E+PP+ + S
Sbjct: 313 DTRAVAGRERPPRVATLS 330
>sp|Q61858|GPAN1_MOUSE G patch domain and ankyrin repeat-containing protein 1 OS=Mus
musculus GN=Gpank1 PE=2 SV=2
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKP--IEAL 69
+ +S+ GF+LL + GW+ G GLG +GR PI T +K+++ G+G +P+ A
Sbjct: 269 VPTSSPGFRLLLRGGWEPGMGLGPRGEGRANPIPTILKRDQEGLGYRSPPQPRVTHFAAR 328
Query: 70 EAESKNEKEKPPKKSKASKRMRKMLELERRLQETEFDRAFRREF 113
+ + + +E+ P+ + S+R E R QE E RA+ R+
Sbjct: 329 DTRAVSGRERVPRVATLSQR-------ENRRQE-EKGRAWERDL 364
>sp|A7TQN2|SQS1_VANPO Protein SQS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=SQS1 PE=3 SV=1
Length = 767
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGIGAEKV 60
GE + + I +NIG LL++ GW EG GLGI +G EP+ VKK+K G+ E+
Sbjct: 704 GEVVGQDAPVIDRNNIGRILLERLGWSEGEGLGIQGNKGISEPVFAVVKKSKTGLRHERK 763
Query: 61 KR 62
KR
Sbjct: 764 KR 765
>sp|O94585|YQ7D_SCHPO Meiotically up-regulated protein C1442.13c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1442.13c PE=1
SV=3
Length = 187
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 1 MGEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGI 55
M + GSSA ++ G QLL+ GW G GLG QG ++P+ VK NK+G+
Sbjct: 132 MDGHVVGSSAPAINNGKGKQLLEMMGWSRGKGLGSENQGMVDPVVAVVKNNKQGL 186
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 11 AITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAE 58
I +SNIG ++L+ GWKEG+GLG QG PI+ V+ G+GA+
Sbjct: 674 GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK 721
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
+ S NIG ++L+ GWKEG+GLG +QG + PI + G+GA
Sbjct: 856 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 901
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
+ S NIG ++L+ GWKEG+GLG +QG + PI + G+GA
Sbjct: 856 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 901
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
I SNIG ++L+ GW+EG+GLG QG PI V+ G+GA
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
+ S NIG ++L+ GWKEG+GLG +QG + PI + G+GA
Sbjct: 778 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 823
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
I SNIG ++L+ GW+EG+GLG QG PI V+ G+GA
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
I SNIG ++L+ GW+EG+GLG QG PI V+ G+GA
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
I SNIG ++L+ GW+EG+GLG QG PI V+ G+GA
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
>sp|Q9CZX5|PINX1_MOUSE PIN2/TERF1-interacting telomerase inhibitor 1 OS=Mus musculus
GN=Pinx1 PE=2 SV=2
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 15 SNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
S G ++L+K GW +G GLG EQG E I+ VK N G+GA
Sbjct: 27 SKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLGA 69
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 11 AITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAE 58
I +SNIG ++L+ GWKEG+GLG QG PI+ V+ G+GA+
Sbjct: 758 GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK 805
>sp|A4L691|PINX1_RAT PIN2/TERF1-interacting telomerase inhibitor 1 OS=Rattus
norvegicus GN=Pinx1 PE=2 SV=1
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 15 SNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
S G ++L+K GW +G GLG EQG E I+ VK N G+GA
Sbjct: 27 SKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLGA 69
>sp|Q75E62|SQS1_ASHGO Protein SQS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SQS1 PE=3 SV=1
Length = 679
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
G + G + I N+G +LL+K GW G GLG+ +G EP+ VKKN+ G+
Sbjct: 621 GAIVGGDAPTIGQDNVGRRLLEKLGWTHGEGLGVHGNKGISEPLMARVKKNRSGL 675
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 11 AITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAE 58
I +SNIG ++L+ GWKEG+GLG QG PI+ V+ G+GA+
Sbjct: 763 GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK 810
>sp|A5DSB5|SQS1_LODEL Protein SQS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=SQS1 PE=3
SV=1
Length = 792
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGI 55
G+ + + I +N+G Q+L++ GW +G GLG++ +G EPI VK +K GI
Sbjct: 738 GDIVGAEAPEIDQNNLGRQMLERLGWSKGMGLGLSGRGINEPIVAKVKMSKTGI 791
>sp|Q9URX9|PXR1_SCHPO Protein pxr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pxr1 PE=1 SV=1
Length = 284
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 11 AITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
A ++ +GF+LL +GW G GLG + GR+ I+ +K + GIGA
Sbjct: 22 AKDTNRLGFKLLSSYGWVNGNGLGEKQHGRIHNIKVSLKDDTLGIGA 68
>sp|P53866|SQS1_YEAST Protein SQS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SQS1 PE=1 SV=1
Length = 767
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
GE + ++ I + NIG ++L+K GWK G GLGI +G EPI +KKN+ G+
Sbjct: 708 GEIVGQNAPEIGNENIGRRMLEKLGWKSGEGLGIQGNKGISEPIFAKIKKNRSGL 762
>sp|A6ZRL6|SQS1_YEAS7 Protein SQS1 OS=Saccharomyces cerevisiae (strain YJM789) GN=SQS1
PE=3 SV=1
Length = 767
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
GE + ++ I + NIG ++L+K GWK G GLGI +G EPI +KKN+ G+
Sbjct: 708 GEIVGQNAPEIGNENIGRRMLEKLGWKSGEGLGIQGNKGISEPIFAKIKKNRSGL 762
>sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens
GN=PINX1 PE=1 SV=2
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 15 SNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGA 57
S G ++L+K GW +G GLG EQG + I+ VK N G+GA
Sbjct: 27 SKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGA 69
>sp|Q59UG4|SQS1_CANAL Protein SQS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SQS1 PE=3 SV=1
Length = 705
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
G+ + + I SSN+G Q+L+K GW +G GLG+ +G EPI VK +K GI
Sbjct: 650 GDIVGAEAPEIGSSNLGRQMLEKLGWIQGQGLGVDGNKGINEPILAKVKTSKTGI 704
>sp|A5DEF8|SQS1_PICGU Protein SQS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=SQS1 PE=3 SV=3
Length = 749
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGIG 56
G + G + I +N+G QLL+K GW +G GLG +G EP+ VKK+K G+G
Sbjct: 690 GHIVGGMAPEIDHTNVGRQLLEKLGWVKGEGLGAHGNKGISEPLVATVKKSKTGLG 745
>sp|Q8CH02|SUGP1_MOUSE SURP and G-patch domain-containing protein 1 OS=Mus musculus
GN=Sugp1 PE=1 SV=1
Length = 643
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPI 44
+T NIG+Q+L K GWKEG GLG QG P+
Sbjct: 558 LTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPV 590
>sp|Q68FU8|SUGP1_RAT SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus
GN=Sugp1 PE=2 SV=1
Length = 644
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPI 44
+T NIG+Q+L K GWKEG GLG QG P+
Sbjct: 559 LTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPV 591
>sp|Q8IWZ8|SUGP1_HUMAN SURP and G-patch domain-containing protein 1 OS=Homo sapiens
GN=SUGP1 PE=1 SV=2
Length = 645
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPI 44
+T NIG+Q+L K GWKEG GLG QG P+
Sbjct: 560 LTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPV 592
>sp|Q6BYP9|SQS1_DEBHA Protein SQS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SQS1 PE=3 SV=2
Length = 808
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
G+ + S+ I ++NIG +LL+K GW +G GLG +G EP+ +KK+K G+
Sbjct: 753 GDIVGASAPEIGTNNIGRKLLEKLGWSKGEGLGAHGNKGISEPVVAKIKKSKTGL 807
>sp|Q875B6|SQS1_PODAS Protein SQS1 OS=Podospora anserina GN=SQS1 PE=3 SV=1
Length = 718
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 GEELSGSSAAITSSNIGFQLLKKHGWKEGTGLGIAE-QGRLEPIRTHVKKNKRGIG 56
GE + S+ + N G +L+K GW +G LG E +G LEP+ VKK+K G+G
Sbjct: 661 GEVVGASAPELGQENKGRAMLEKMGWSKGMALGALENKGILEPVAQVVKKSKAGLG 716
>sp|Q4V842|GPTC4_XENLA G patch domain-containing protein 4 OS=Xenopus laevis GN=gpatch4
PE=2 SV=1
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 22 LKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIG 56
+ KHGWKEG GLG E G E I+ VK + G+G
Sbjct: 19 MHKHGWKEGKGLGRRENGICEAIKVKVKCDHAGVG 53
>sp|Q6BUE3|PXR1_DEBHA Protein PXR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS
767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PXR1 PE=3
SV=1
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 14 SSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIE 67
+S G Q L++ GWK G GLG+ E ++ +K + G+G++ K+ K E
Sbjct: 25 TSRFGHQYLERMGWKPGKGLGLVEHATTSHVKVSIKDDNLGLGSKLAKKQKTDE 78
>sp|P11365|GAG_IPMA Retrovirus-related Gag polyprotein OS=Mouse intracisternal
a-particle MIA14 GN=gag PE=4 SV=2
Length = 827
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 21 LLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIG 56
++ K G+KEG GLG EQGR+EPI + ++++G+G
Sbjct: 790 IMAKMGYKEGKGLGHQEQGRIEPISPNGNQDRQGLG 825
>sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4
Length = 2426
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 10 AAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIEAL 69
AA + +G L++K GW+EG GLG ++G EPI K +++G+ A + K
Sbjct: 2301 AAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERAQKRSGNF 2360
Query: 70 EAESKNEKEKPPKKSKASKRMRKMLEL--ERRLQETEF 105
A K+ K P + ++E+ +RR Q EF
Sbjct: 2361 SAAMKDLSGKHP--------VSALMEICNKRRWQPPEF 2390
>sp|Q9QX47|SON_MOUSE Protein SON OS=Mus musculus GN=Son PE=1 SV=2
Length = 2444
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 10 AAITSSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKPIEAL 69
AA + +G L++K GW+EG GLG ++G EPI K +++G+ A + K
Sbjct: 2319 AAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERAQKRSGNF 2378
Query: 70 EAESKNEKEKPPKKSKASKRMRKMLEL--ERRLQETEF 105
A K+ K P + ++E+ +RR Q EF
Sbjct: 2379 SAAMKDLSGKHP--------VSALMEICNKRRWQPPEF 2408
>sp|Q5A660|PXR1_CANAL Protein PXR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=PXR1 PE=3 SV=1
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 14 SSNIGFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKR 62
+S G Q L K GW++G+GLG+ ++ +K + G+GA+ KR
Sbjct: 25 TSRFGHQYLAKMGWQQGSGLGLVSHALTTHVKVSIKDDNLGLGAKLHKR 73
>sp|Q06152|YL271_YEAST Uncharacterized protein YLR271W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR271W PE=1 SV=1
Length = 274
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 18 GFQLLKKHGWKEGTGLGIAEQGRLEPIRTHVKKNKRGIGAEKVKRPKP 65
G+++++ G+KEG LG E EPI+ + +RGI AEK P P
Sbjct: 45 GYKMMENMGYKEGETLGSNESALKEPIKVEINTKRRGIRAEK---PDP 89
>sp|Q6CQ59|SQS1_KLULA Protein SQS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SQS1 PE=3
SV=1
Length = 740
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 12 ITSSNIGFQLLKKHGWKEGTGLGI-AEQGRLEPIRTHVKKNKRGI 55
I NIG ++L+K GW G GLG QG EPI VKKNK G+
Sbjct: 688 IGIDNIGRRMLEKLGWNIGQGLGAHGNQGINEPILAKVKKNKSGL 732
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,645,990
Number of Sequences: 539616
Number of extensions: 1746239
Number of successful extensions: 9395
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 8709
Number of HSP's gapped (non-prelim): 838
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)