BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033513
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 17 KEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKM-EKE 75
KE D D++++ M+E+E + RE++ ERE K E SRR ++ ++ +M E
Sbjct: 2023 KELRDKDLREKEMREKEQREKELHREKDQREREHREK-EQSRRAMDVEQEGRGGRMRELS 2081
Query: 76 NLEKEKSVLMGTASN------QDNQDGALEITVSG 104
+ +K K + G AS+ Q N++ A++ G
Sbjct: 2082 SYQKSKMDIAGEASSLTAIDCQHNKENAMDTIAQG 2116
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 17 KEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKA--ELSRREAEIARQEARLKMEK 74
KE + +I+++ ++E+E Q + RE+E+ +++ K E +RE E+ R++ + E+
Sbjct: 1998 KEQKEKEIREKDLREKE-QRERDNREKELRDKDLREKEMREKEQREKELHREKD--QRER 2054
Query: 75 ENLEKEKS 82
E+ EKE+S
Sbjct: 2055 EHREKEQS 2062
>sp|Q5D7I1|TRIM5_ATEGE Tripartite motif-containing protein 5 OS=Ateles geoffroyi GN=TRIM5
PE=2 SV=1
Length = 547
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 12 FVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
V+E+ + +Q + R+ Q E+ E +V E +A+WK ++ + I + +L+
Sbjct: 131 LVEEVAQKYQEKLQVALEMMRQKQQDAEKLEADVREEQASWKIQIENDKTNILAEFKQLR 190
Query: 72 --------MEKENLEKEKSVLMGTASNQDN 93
E +NLEKE+ L+ T + +N
Sbjct: 191 DILDCEESNELQNLEKEEENLLKTLAQSEN 220
>sp|Q5D7H7|TRIM5_LAGLA Tripartite motif-containing protein 5 OS=Lagothrix lagotricha
GN=TRIM5 PE=3 SV=1
Length = 547
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 12 FVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
V+E+ + +Q + RE Q E+ E +V E +A+WK ++ + I + +L+
Sbjct: 131 LVEEVAQKYREKLQVALEMMREKQQDAEKLEADVREEQASWKIQIKNDKTNILAEFKQLR 190
Query: 72 --------MEKENLEKEKSVLMGTASNQDN 93
E +NLEKE+ L+ + +N
Sbjct: 191 DILDCEESNELQNLEKEEENLLKILAQSEN 220
>sp|P17953|ASA1_ENTFA Aggregation substance OS=Enterococcus faecalis (strain ATCC 700802
/ V583) GN=asa1 PE=1 SV=1
Length = 1296
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 7 TVVDKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQ 66
TVV+K ++L D+ KE+E+ +E+ +++A++ A KA+ + E A
Sbjct: 181 TVVEKPAEDLGNVSSKDLA---AKEKEVDQLQKEQAKKIAQQAAELKAKNEKIAKENAEI 237
Query: 67 EARLKMEKENLEKE 80
A+ K EKE EKE
Sbjct: 238 AAKNKAEKERYEKE 251
>sp|Q2GZN9|NST1_CHAGB Stress response protein NST1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=NST1 PE=3 SV=1
Length = 1255
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 27 RIMKEREMQSYIEEREREVAEREAA-WKAELSRREAEIARQEARLKMEKENLEKEK 81
R +E E Q ER R++ +RE A KA +R + R+EARL+ ++ +KE+
Sbjct: 638 RKAEEEERQRKEAERLRKIQDREEAERKAREAREREKKTREEARLREKEAREQKER 693
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 ADIQDRIMKEREMQSYIEERER-EVAEREAAWKAELSRREAEIARQEARLKMEKEN 76
A+ ++R KE E I++RE E REA + + +R EA + +EAR + E+++
Sbjct: 640 AEEEERQRKEAERLRKIQDREEAERKAREAREREKKTREEARLREKEAREQKERKD 695
>sp|Q5D7I5|TRIM5_CALPY Tripartite motif-containing protein 5 OS=Callithrix pygmaea
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 12 FVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
V+E+ E +Q + R+ Q E+ E +V E +A+WK ++ + I + +L+
Sbjct: 131 LVEEVAEKYQGKLQVALEMMRQKQQDAEKLEADVREEQASWKIQIQNDKTNIMAEFKQLR 190
Query: 72 --------MEKENLEKEKSVLM 85
E +NLEKE+ ++
Sbjct: 191 DILDCEESKELQNLEKEEKNIL 212
>sp|Q1ACD5|TRIM5_SAGOE Tripartite motif-containing protein 5 OS=Saguinus oedipus GN=TRIM5
PE=3 SV=1
Length = 494
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 12 FVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
V+E+ E +Q + R+ Q E+ E +V E +A+WK ++ + I + +L+
Sbjct: 131 LVEEVAEKYQEKLQVALEMMRQKQQDAEKLEADVREEQASWKIQIRNDKTNIMAEFKQLR 190
Query: 72 --------MEKENLEKEKSVLM 85
E +NLEKE+ ++
Sbjct: 191 DILDCEESKELQNLEKEEKNIL 212
>sp|Q5C8U1|TRIM5_SAGLB Tripartite motif-containing protein 5 OS=Saguinus labiatus GN=TRIM5
PE=2 SV=1
Length = 494
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 12 FVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
V+E+ E +Q + R+ Q E+ E +V E +A+WK ++ + I + +L+
Sbjct: 131 LVEEVAEKYQEKLQVALEMMRQKQQDAEKLEADVREEQASWKIQIRNDKTNIMAEFKQLR 190
Query: 72 --------MEKENLEKEKSVLM 85
E +NLEKE+ ++
Sbjct: 191 DILDCEESKELQNLEKEEKNIL 212
>sp|A8PKH2|EIF3A_BRUMA Eukaryotic translation initiation factor 3 subunit A OS=Brugia
malayi GN=Bm1_29045 PE=3 SV=1
Length = 1096
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 21 DADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKE 80
DAD + +++ ++++SY E ER+ E+ +AE +R+E + +E R ++E+EN+EKE
Sbjct: 571 DADYERILLRRKKIESYKETSERQKLEKCQQAQAEANRKEEQRRAEEMR-RLEQENIEKE 629
Query: 81 K 81
K
Sbjct: 630 K 630
>sp|A4R2R1|NST1_MAGO7 Stress response protein NST1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=NST1 PE=3 SV=2
Length = 1311
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 27 RIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLK 71
R +KERE + E+ ++E E+EA KAE REA+ + A K
Sbjct: 744 RELKEREARERKEKADKERLEKEAKIKAEKEAREAQRKAERASQK 788
>sp|O43068|MDE4_SCHPO Monopolin complex subunit mde4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mde4 PE=1 SV=1
Length = 421
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 18/85 (21%)
Query: 12 FVQELKEAL---DADIQDRIMKEREMQSYIEEREREVA-------EREAAWKAELSRREA 61
+ LK+AL DA++ + +QS++ +E E+ E+ WK L E+
Sbjct: 166 IIANLKKALKEKDAEVLN-------LQSHVSSKESELDRFKIKLETEESNWKVRLQVLES 218
Query: 62 EIARQEARLKMEKENLEKEKSVLMG 86
++A Q+ +L+M+K++ E+ KS+L+
Sbjct: 219 KLATQDRKLRMQKKSTER-KSLLVS 242
>sp|Q0UJJ7|NST1_PHANO Stress response protein NST1 OS=Phaeosphaeria nodorum (strain SN15
/ ATCC MYA-4574 / FGSC 10173) GN=NST1 PE=3 SV=3
Length = 1202
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 KFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIA 64
K +E K+ +A+ Q R+ +ER+ Q +E + RE E K + R+E + A
Sbjct: 657 KAQEEEKQRKEAERQKRLQEERDRQQELERKAREQKALEKKVKDDAKRKERDRA 710
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.320
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,890,548
Number of Sequences: 539616
Number of extensions: 1256754
Number of successful extensions: 18142
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 1141
Number of HSP's that attempted gapping in prelim test: 12775
Number of HSP's gapped (non-prelim): 5134
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)