Query 033513
Match_columns 117
No_of_seqs 4 out of 6
Neff 1.2
Searched_HMMs 29240
Date Mon Mar 25 04:28:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nmd_A CGMP dependent protein 47.0 48 0.0017 21.7 5.3 9 13-21 21-29 (72)
2 3nmd_A CGMP dependent protein 46.7 59 0.002 21.3 6.4 49 32-84 22-70 (72)
3 4egx_A Kinesin-like protein KI 45.7 61 0.0021 22.9 6.1 27 33-59 9-35 (184)
4 1pd7_B MAD1; PAH2, SIN3, eukar 44.7 13 0.00045 20.9 1.9 12 33-44 10-21 (26)
5 2qag_C Septin-7; cell cycle, c 44.7 4.6 0.00016 31.7 0.0 53 30-82 334-390 (418)
6 3oja_A Leucine-rich immune mol 44.6 97 0.0033 23.2 7.6 23 57-79 441-463 (487)
7 1ypr_A Profilin; actin-binding 43.4 5.7 0.0002 26.5 0.3 13 100-112 60-72 (125)
8 3d9y_A Profilin; yeast, actin- 38.1 7.8 0.00027 25.7 0.3 15 99-113 61-75 (127)
9 3nul_A Profilin I; cytoskeleto 36.9 8.3 0.00028 25.9 0.3 14 100-113 64-77 (130)
10 1acf_A Profilin I; protein bin 36.7 8.4 0.00029 25.5 0.3 13 100-112 60-72 (125)
11 2v8f_A Profilin-2, profilin II 29.8 13 0.00044 25.5 0.3 13 100-112 64-76 (140)
12 3oja_A Leucine-rich immune mol 29.0 1.4E+02 0.0049 22.3 6.0 28 58-85 435-462 (487)
13 2pbd_P Profilin-1, profilin I; 28.3 14 0.00048 25.1 0.3 13 100-112 63-75 (139)
14 3obv_E Protein diaphanous homo 27.4 1.5E+02 0.005 23.6 6.1 17 7-23 367-383 (457)
15 2i46_A Adrenocortical dysplasi 25.9 37 0.0013 25.6 2.3 26 85-110 40-67 (161)
16 2l2l_B Methyl-CPG-binding doma 24.8 61 0.0021 19.1 2.6 21 59-79 8-28 (36)
17 1q6h_A FKBP-type peptidyl-prol 24.3 2E+02 0.007 20.7 6.2 37 10-49 52-88 (224)
18 3nec_A Profilin, inflammatory 24.2 19 0.00063 25.7 0.3 15 100-114 89-103 (166)
19 3cl3_D NF-kappa-B essential mo 24.1 69 0.0024 23.3 3.4 59 26-84 16-85 (130)
20 2z15_A Protein TOB1; human TOB 23.3 11 0.00038 26.4 -1.0 11 103-113 58-68 (130)
21 2jkg_A Profilin; proline-rich 22.6 19 0.00066 26.9 0.1 14 100-113 94-107 (179)
22 2gv1_A Probable acylphosphatas 20.4 35 0.0012 21.5 1.0 28 84-113 32-59 (92)
23 1co4_A AMT1, protein (activato 20.1 31 0.0011 20.9 0.7 13 100-112 2-14 (42)
No 1
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=47.01 E-value=48 Score=21.73 Aligned_cols=9 Identities=33% Similarity=0.597 Sum_probs=5.3
Q ss_pred HHHHHHHhc
Q 033513 13 VQELKEALD 21 (117)
Q Consensus 13 v~~lkeal~ 21 (117)
+++|+.+|.
T Consensus 21 i~eLq~~L~ 29 (72)
T 3nmd_A 21 LRDLQYALQ 29 (72)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566666653
No 2
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.67 E-value=59 Score=21.31 Aligned_cols=49 Identities=27% Similarity=0.500 Sum_probs=22.5
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 033513 32 REMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVL 84 (117)
Q Consensus 32 remqsy~eererevaereaawkaelsrreaei~~qearl~mer~nlekeksvl 84 (117)
|+.|.-|+++..+...++.- +-..|.++...+..++-=+..|-|=+||+
T Consensus 22 ~eLq~~L~~K~eELr~kd~~----I~eLEk~L~ekd~eI~~LqseLDKfrSVl 70 (72)
T 3nmd_A 22 RDLQYALQEKIEELRQRDAL----IDELELELDQKDELIQMLQNELDKYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 55666666666555554433 22223333333333333333444556665
No 3
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=45.74 E-value=61 Score=22.87 Aligned_cols=27 Identities=30% Similarity=0.540 Sum_probs=22.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhhH
Q 033513 33 EMQSYIEEREREVAEREAAWKAELSRR 59 (117)
Q Consensus 33 emqsy~eererevaereaawkaelsrr 59 (117)
|+..-|++.|+.++|-...|...|.+-
T Consensus 9 e~~e~L~~~e~l~~el~~tWeeKl~~t 35 (184)
T 4egx_A 9 EAIERLKETEKIIAELNETWEEKLRRT 35 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 677778889999999999999998543
No 4
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=44.72 E-value=13 Score=20.94 Aligned_cols=12 Identities=58% Similarity=0.955 Sum_probs=9.4
Q ss_pred HHhHHHHHHHHH
Q 033513 33 EMQSYIEERERE 44 (117)
Q Consensus 33 emqsy~eerere 44 (117)
|--+|||.|||+
T Consensus 10 eAAeyLErrEre 21 (26)
T 1pd7_B 10 EAADYLERRERE 21 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 446899999984
No 5
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=44.67 E-value=4.6 Score=31.68 Aligned_cols=53 Identities=28% Similarity=0.404 Sum_probs=0.0
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHhhhHH----HHHHHHHHHhhhhhhhhhhhhh
Q 033513 30 KEREMQSYIEEREREVAEREAAWKAELSRRE----AEIARQEARLKMEKENLEKEKS 82 (117)
Q Consensus 30 keremqsy~eererevaereaawkaelsrre----aei~~qearl~mer~nlekeks 82 (117)
+|.||....+++=++-.++-..|.++|-++- .++..|...|...+..||+|+.
T Consensus 334 ~e~~~~~~f~~~v~~~~~~~~~~e~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 390 (418)
T 2qag_C 334 MEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKA 390 (418)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666554444445556666664432 2333344444444444444443
No 6
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=44.57 E-value=97 Score=23.19 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=11.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhh
Q 033513 57 SRREAEIARQEARLKMEKENLEK 79 (117)
Q Consensus 57 srreaei~~qearl~mer~nlek 79 (117)
+.++-.+.+..+|++.+-+++.+
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~ 463 (487)
T 3oja_A 441 QHKETQLAEENARLKKLNGEADL 463 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhhhhhhhhhh
Confidence 34444444455555555555544
No 7
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=43.45 E-value=5.7 Score=26.52 Aligned_cols=13 Identities=31% Similarity=0.657 Sum_probs=11.8
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|++.|+||.|+|-
T Consensus 60 l~l~G~KY~~i~~ 72 (125)
T 1ypr_A 60 LHIQGQKFMLLRA 72 (125)
T ss_dssp EEETTEEEEEEEE
T ss_pred eEECCEEEEEEec
Confidence 8999999999984
No 8
>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A
Probab=38.07 E-value=7.8 Score=25.75 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=13.1
Q ss_pred EEEEecceehhhhhh
Q 033513 99 EITVSGEKYRCLRFA 113 (117)
Q Consensus 99 eitvsgekyrclrf~ 113 (117)
-|++.|+||.|+|..
T Consensus 61 Gl~l~G~Ky~vir~d 75 (127)
T 3d9y_A 61 GIILAGQKYITIRAE 75 (127)
T ss_dssp CEEETTEEEEEEEEC
T ss_pred CEEEcCeEEEEEEeC
Confidence 389999999999974
No 9
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=36.90 E-value=8.3 Score=25.87 Aligned_cols=14 Identities=29% Similarity=0.510 Sum_probs=12.6
Q ss_pred EEEecceehhhhhh
Q 033513 100 ITVSGEKYRCLRFA 113 (117)
Q Consensus 100 itvsgekyrclrf~ 113 (117)
|++.|+||.|+|..
T Consensus 64 l~l~G~Ky~~ir~d 77 (130)
T 3nul_A 64 LFLGGEKYMVIQGE 77 (130)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEECCeEEEEEEeC
Confidence 89999999999864
No 10
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=36.68 E-value=8.4 Score=25.51 Aligned_cols=13 Identities=31% Similarity=0.537 Sum_probs=11.7
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|++.|+||.|+|-
T Consensus 60 i~l~G~KY~~i~~ 72 (125)
T 1acf_A 60 FDLAGVHYVTLRA 72 (125)
T ss_dssp EEETTEEEEEEEE
T ss_pred eEECCEEEEEEEe
Confidence 8999999999884
No 11
>2v8f_A Profilin-2, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus} PDB: 2v8c_A 2vk3_A* 1d1j_A*
Probab=29.80 E-value=13 Score=25.54 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=12.2
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|++.|+||.|+|.
T Consensus 64 l~l~G~Ky~~ir~ 76 (140)
T 2v8f_A 64 LTLGAKKCSVIRD 76 (140)
T ss_dssp EEETTEEEEEEEE
T ss_pred eEECCEEEEEEec
Confidence 8999999999986
No 12
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=29.00 E-value=1.4e+02 Score=22.25 Aligned_cols=28 Identities=21% Similarity=0.142 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 033513 58 RREAEIARQEARLKMEKENLEKEKSVLM 85 (117)
Q Consensus 58 rreaei~~qearl~mer~nlekeksvlm 85 (117)
+....+..++..++.|.++++|+-.-+.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 435 RDWDMYQHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 3455666677777778888887765543
No 13
>2pbd_P Profilin-1, profilin I; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens} SCOP: d.110.1.1 PDB: 1fik_A 1cjf_A 1pfl_A 1fil_A* 2pav_P* 3chw_P* 1awi_A 1cf0_A* 1pne_A 1hlu_P 2btf_P* 3u4l_P* 3ub5_P*
Probab=28.29 E-value=14 Score=25.14 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=12.3
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|++.|+||.|+|.
T Consensus 63 l~lgG~Ky~~ir~ 75 (139)
T 2pbd_P 63 LTLGGQKCSVIRD 75 (139)
T ss_dssp EEETTEEEEEEEE
T ss_pred eEECCEEEEEEec
Confidence 8999999999997
No 14
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=27.44 E-value=1.5e+02 Score=23.58 Aligned_cols=17 Identities=12% Similarity=0.231 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHhchH
Q 033513 7 TVVDKFVQELKEALDAD 23 (117)
Q Consensus 7 avv~~fv~~lkeal~ad 23 (117)
.++.+|+..++.|..-.
T Consensus 367 ~~~~~F~~~fkkA~~eN 383 (457)
T 3obv_E 367 MDLHNFRNMFLQAVKEN 383 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666777777665543
No 15
>2i46_A Adrenocortical dysplasia protein homolog; TPP1, OB fold, POT1 binding, protein binding; 2.70A {Homo sapiens}
Probab=25.90 E-value=37 Score=25.59 Aligned_cols=26 Identities=31% Similarity=0.474 Sum_probs=21.8
Q ss_pred hccccCCCCCCCceEEEEeccee--hhh
Q 033513 85 MGTASNQDNQDGALEITVSGEKY--RCL 110 (117)
Q Consensus 85 mgtas~~dnqdgaleitvsgeky--rcl 110 (117)
-|..|+.|+||-+--+-||.-+| |||
T Consensus 40 ~gps~apdt~~v~A~llvSDgthsvrcl 67 (161)
T 2i46_A 40 AGPSHAPDTSDVGATLLVSDGTHSVRCL 67 (161)
T ss_dssp CSCCSSCCCTTSCEEEEEECSSCEEEEE
T ss_pred CCCCCCCCCCCceeEEEEcCCceEEEEE
Confidence 47778999999999999998877 676
No 16
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=24.77 E-value=61 Score=19.13 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhh
Q 033513 59 REAEIARQEARLKMEKENLEK 79 (117)
Q Consensus 59 reaei~~qearl~mer~nlek 79 (117)
-+..|.+||.|.+.-|..|+.
T Consensus 8 te~DIr~QE~rV~~aR~rL~e 28 (36)
T 2l2l_B 8 TDEDIRKQEERVQQVRKKLEE 28 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 367789999999988888875
No 17
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=24.31 E-value=2e+02 Score=20.73 Aligned_cols=37 Identities=14% Similarity=0.383 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhchHHHHHHHhHHHHhHHHHHHHHHHHHHH
Q 033513 10 DKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAERE 49 (117)
Q Consensus 10 ~~fv~~lkeal~adiqdrimkeremqsy~eererevaere 49 (117)
+.|+.-|+.++.-.- . |.+-+|+.++++.+..+.++.
T Consensus 52 ~~~~~G~~d~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~ 88 (224)
T 1q6h_A 52 DQLIAGVQDAFADKS--K-LSDQEIEQTLQAFEARVKSSA 88 (224)
T ss_dssp HHHHHHHHHHHTTCC--S-SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC--C-CCHHHHHHHHHHHHHHHHHHH
Confidence 456666777776543 2 788899999998777665543
No 18
>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}
Probab=24.15 E-value=19 Score=25.73 Aligned_cols=15 Identities=33% Similarity=0.689 Sum_probs=13.2
Q ss_pred EEEecceehhhhhhh
Q 033513 100 ITVSGEKYRCLRFAK 114 (117)
Q Consensus 100 itvsgekyrclrf~k 114 (117)
|++.|+||.|+|...
T Consensus 89 l~lgG~KY~~ir~d~ 103 (166)
T 3nec_A 89 VWIGGQKYKVVRPEK 103 (166)
T ss_dssp EEETTEEEEEEEEEE
T ss_pred eEEeCeEEEEEEecC
Confidence 899999999999753
No 19
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=24.13 E-value=69 Score=23.26 Aligned_cols=59 Identities=24% Similarity=0.292 Sum_probs=20.6
Q ss_pred HHHHhHHHHhHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 033513 26 DRIMKEREMQSYIEEREREVAEREAAWKAELS-----------RREAEIARQEARLKMEKENLEKEKSVL 84 (117)
Q Consensus 26 drimkeremqsy~eererevaereaawkaels-----------rreaei~~qearl~mer~nlekeksvl 84 (117)
.++-.---|..-+++|=+.+.+.-.+|..++. ..+-..---|+-|+|||..-..||+-|
T Consensus 16 skL~~Ae~~k~~Leek~~~~e~~~~~~~~Elee~kqq~~~~~d~L~lQ~esmeaalkmEr~~~~eEKrkL 85 (130)
T 3cl3_D 16 SRLEAATKECQALEGRARAASEQARQLESEREALQQQHSVQVDQLRMQGQSVEAALRMERQAASEEKRKL 85 (130)
T ss_dssp -----------------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433344555677888888888888877663 345566677899999999988888754
No 20
>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B
Probab=23.35 E-value=11 Score=26.44 Aligned_cols=11 Identities=27% Similarity=0.969 Sum_probs=9.0
Q ss_pred ecceehhhhhh
Q 033513 103 SGEKYRCLRFA 113 (117)
Q Consensus 103 sgekyrclrf~ 113 (117)
.|..|||+|+.
T Consensus 58 kGs~yRcI~i~ 68 (130)
T 2z15_A 58 KGSGFRCIHIG 68 (130)
T ss_dssp TTHHHHCEEES
T ss_pred cccceeEEEEC
Confidence 57889999984
No 21
>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, cytoskeleton; 1.89A {Plasmodium falciparum} PDB: 2jkf_A
Probab=22.60 E-value=19 Score=26.86 Aligned_cols=14 Identities=21% Similarity=0.574 Sum_probs=12.6
Q ss_pred EEEecceehhhhhh
Q 033513 100 ITVSGEKYRCLRFA 113 (117)
Q Consensus 100 itvsgekyrclrf~ 113 (117)
|.+.|.||.|+|..
T Consensus 94 v~lgG~KY~~i~~d 107 (179)
T 2jkg_A 94 VWLGGTKYQFINIE 107 (179)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEECCEEEEEEEec
Confidence 78999999999875
No 22
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=20.40 E-value=35 Score=21.48 Aligned_cols=28 Identities=36% Similarity=0.580 Sum_probs=20.7
Q ss_pred hhccccCCCCCCCceEEEEecceehhhhhh
Q 033513 84 LMGTASNQDNQDGALEITVSGEKYRCLRFA 113 (117)
Q Consensus 84 lmgtas~~dnqdgaleitvsgekyrclrf~ 113 (117)
|-|...|.+ ||.++|.+.|+.-..-.|-
T Consensus 32 L~G~V~N~~--dG~Vei~~eG~~~~i~~f~ 59 (92)
T 2gv1_A 32 LTGYAKNLD--DGSVEVVACGEEGQVEKLM 59 (92)
T ss_dssp CCCEEEECS--SSCEEEEECSCHHHHHHHH
T ss_pred CeEEEEECC--CCcEEEEEEeCHHHHHHHH
Confidence 568877765 7899999999875544443
No 23
>1co4_A AMT1, protein (activator of metallothionein 1); metal regulation, translation/regulation protein complex; NMR {Synthetic} SCOP: g.47.1.1
Probab=20.12 E-value=31 Score=20.86 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=10.3
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|-+.|+||-|.+-
T Consensus 2 ~li~g~K~AC~~C 14 (42)
T 1co4_A 2 VVINGVKYACDSC 14 (42)
T ss_dssp EEETTEEEEETTT
T ss_pred EEEcCcEeehhhh
Confidence 5689999998754
Done!