Query 033513
Match_columns 117
No_of_seqs 4 out of 6
Neff 1.2
Searched_HMMs 13730
Date Mon Mar 25 04:28:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033513.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033513hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d1ja_ d.110.1.1 (A:) Profili 54.1 1.4 0.00011 28.5 0.3 14 99-112 62-75 (138)
2 d1acfa_ d.110.1.1 (A:) Profili 52.2 1.6 0.00012 27.4 0.3 13 100-112 60-72 (125)
3 d3nula_ d.110.1.1 (A:) Profili 47.3 2.1 0.00016 27.3 0.3 15 100-114 64-78 (130)
4 d1ypra_ d.110.1.1 (A:) Profili 46.8 2.2 0.00016 26.8 0.3 14 100-113 60-73 (125)
5 d2pbdp1 d.110.1.1 (P:1-139) Pr 46.1 2.3 0.00017 27.4 0.3 13 99-111 62-74 (139)
6 d1co4a_ g.47.1.1 (A:) Zinc dom 25.0 9.7 0.00071 21.9 0.6 12 100-111 2-13 (42)
7 d1ed7a_ b.72.2.1 (A:) Chitin-b 24.8 11 0.00077 21.2 0.7 13 99-111 13-25 (45)
8 d1pj5a1 b.44.2.1 (A:743-830) N 21.6 13 0.00096 21.6 0.8 30 81-110 43-72 (88)
9 d2cvda1 a.45.1.1 (A:76-199) Cl 21.4 22 0.0016 19.5 1.7 18 24-41 102-119 (124)
10 d1kkea2 b.21.1.2 (A:313-455) R 19.8 19 0.0014 24.9 1.5 16 93-108 109-124 (143)
No 1
>d1d1ja_ d.110.1.1 (A:) Profilin (actin-binding protein) {Human (Homo sapiens), isoform II [TaxId: 9606]}
Probab=54.05 E-value=1.4 Score=28.55 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=12.4
Q ss_pred EEEEecceehhhhh
Q 033513 99 EITVSGEKYRCLRF 112 (117)
Q Consensus 99 eitvsgekyrclrf 112 (117)
-|++.|+||-|||-
T Consensus 62 Gi~l~G~Ky~~lr~ 75 (138)
T d1d1ja_ 62 GLTLGAKKCSVIRD 75 (138)
T ss_dssp CEEETTEEEEEEEE
T ss_pred CeEECCcEEEEEec
Confidence 48999999999984
No 2
>d1acfa_ d.110.1.1 (A:) Profilin (actin-binding protein) {Acanthamoeba castellanii [TaxId: 5755]}
Probab=52.24 E-value=1.6 Score=27.44 Aligned_cols=13 Identities=31% Similarity=0.537 Sum_probs=11.9
Q ss_pred EEEecceehhhhh
Q 033513 100 ITVSGEKYRCLRF 112 (117)
Q Consensus 100 itvsgekyrclrf 112 (117)
|++.|+||.|+|-
T Consensus 60 i~i~G~KY~~~~~ 72 (125)
T d1acfa_ 60 FDLAGVHYVTLRA 72 (125)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEECCeEEEEEec
Confidence 8999999999984
No 3
>d3nula_ d.110.1.1 (A:) Profilin (actin-binding protein) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=47.35 E-value=2.1 Score=27.34 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=13.3
Q ss_pred EEEecceehhhhhhh
Q 033513 100 ITVSGEKYRCLRFAK 114 (117)
Q Consensus 100 itvsgekyrclrf~k 114 (117)
|++.|+||.|+|..+
T Consensus 64 i~~~G~KY~~lr~d~ 78 (130)
T d3nula_ 64 LFLGGEKYMVIQGEQ 78 (130)
T ss_dssp EEETTEEEEEEEEET
T ss_pred eEECCeEEEEEecCC
Confidence 999999999999653
No 4
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.81 E-value=2.2 Score=26.76 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=12.4
Q ss_pred EEEecceehhhhhh
Q 033513 100 ITVSGEKYRCLRFA 113 (117)
Q Consensus 100 itvsgekyrclrf~ 113 (117)
|++.|+||.|+|-.
T Consensus 60 i~i~G~KY~~~~~d 73 (125)
T d1ypra_ 60 LHIQGQKFMLLRAD 73 (125)
T ss_dssp EEETTEEEEEEEEC
T ss_pred EEEcCeEEEEEecC
Confidence 89999999999853
No 5
>d2pbdp1 d.110.1.1 (P:1-139) Profilin (actin-binding protein) {Human (Homo sapiens), isoform I [TaxId: 9606]}
Probab=46.06 E-value=2.3 Score=27.38 Aligned_cols=13 Identities=31% Similarity=0.641 Sum_probs=12.1
Q ss_pred EEEEecceehhhh
Q 033513 99 EITVSGEKYRCLR 111 (117)
Q Consensus 99 eitvsgekyrclr 111 (117)
=|++.|+||.|||
T Consensus 62 Gi~l~G~Ky~~lr 74 (139)
T d2pbdp1 62 GLTLGGQKCSVIR 74 (139)
T ss_dssp CEEETTEEEEEEE
T ss_pred CeEECCEEEEEEe
Confidence 4999999999998
No 6
>d1co4a_ g.47.1.1 (A:) Zinc domain conserved in yeast copper-regulated transcription factors {Synthetic}
Probab=24.96 E-value=9.7 Score=21.87 Aligned_cols=12 Identities=33% Similarity=0.819 Sum_probs=9.6
Q ss_pred EEEecceehhhh
Q 033513 100 ITVSGEKYRCLR 111 (117)
Q Consensus 100 itvsgekyrclr 111 (117)
|-++|+||-|..
T Consensus 2 vli~g~KyAC~~ 13 (42)
T d1co4a_ 2 VVINGVKYACDS 13 (42)
T ss_dssp EEETTEEEEETT
T ss_pred eEECCeeEeHhh
Confidence 568999998864
No 7
>d1ed7a_ b.72.2.1 (A:) Chitin-binding domain of chitinase A1 {Bacillus circulans [TaxId: 1397]}
Probab=24.76 E-value=11 Score=21.23 Aligned_cols=13 Identities=38% Similarity=0.973 Sum_probs=11.0
Q ss_pred EEEEecceehhhh
Q 033513 99 EITVSGEKYRCLR 111 (117)
Q Consensus 99 eitvsgekyrclr 111 (117)
.+|-.|..|+|+-
T Consensus 13 ~Vty~G~~Y~ciq 25 (45)
T d1ed7a_ 13 LVTYNGKTYKCLQ 25 (45)
T ss_dssp CEEETTEEECBCS
T ss_pred EEEECCeEEEEEe
Confidence 3788999999985
No 8
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase, C-terminal domain {Arthrobacter globiformis [TaxId: 1665]}
Probab=21.64 E-value=13 Score=21.60 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=20.7
Q ss_pred hhhhhccccCCCCCCCceEEEEecceehhh
Q 033513 81 KSVLMGTASNQDNQDGALEITVSGEKYRCL 110 (117)
Q Consensus 81 ksvlmgtas~~dnqdgaleitvsgekyrcl 110 (117)
|+|-||--.+.-..+..|+|-+.|+.|.|-
T Consensus 43 k~Iala~v~~~~~~g~~~~V~~~g~~~~a~ 72 (88)
T d1pj5a1 43 KPIAYSYLPGTVSVGDSVDIEYFGRRITAT 72 (88)
T ss_dssp EEEEEEEEETTCCTTCEEEEEETTEEEEEE
T ss_pred cceEEEEEecCcCCCCEEEEEECCEEEEEE
Confidence 556666554444445678999999999873
No 9
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.42 E-value=22 Score=19.48 Aligned_cols=18 Identities=11% Similarity=0.414 Sum_probs=14.5
Q ss_pred HHHHHHhHHHHhHHHHHH
Q 033513 24 IQDRIMKEREMQSYIEER 41 (117)
Q Consensus 24 iqdrimkeremqsy~eer 41 (117)
..+||+..-.++.||++|
T Consensus 102 ~~~rv~~~P~vk~yl~~r 119 (124)
T d2cvda1 102 LRKKVQAIPAVANWIKRR 119 (124)
T ss_dssp HHHHHHTSHHHHHHHHHS
T ss_pred HHHHHHhCHHHHHHHHHC
Confidence 457888888899999876
No 10
>d1kkea2 b.21.1.2 (A:313-455) Reovirus attachment protein sigma 1 head domain {Reovirus [TaxId: 10891]}
Probab=19.84 E-value=19 Score=24.94 Aligned_cols=16 Identities=38% Similarity=0.449 Sum_probs=13.7
Q ss_pred CCCCceEEEEecceeh
Q 033513 93 NQDGALEITVSGEKYR 108 (117)
Q Consensus 93 nqdgaleitvsgekyr 108 (117)
=|||.|||++-|--|-
T Consensus 109 W~dGeLei~n~GGt~~ 124 (143)
T d1kkea2 109 WQDGVLRLRVEGGGSI 124 (143)
T ss_dssp EETTEEEEEEECSCCC
T ss_pred hhCcEEEEEEcCCcee
Confidence 4799999999998774
Done!