Query 033515
Match_columns 117
No_of_seqs 113 out of 1198
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:30:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 3.7E-26 1.2E-30 137.5 5.5 94 5-104 1-102 (103)
2 1t3k_A Arath CDC25, dual-speci 99.9 2.5E-26 8.7E-31 146.8 5.0 113 2-115 24-152 (152)
3 3gk5_A Uncharacterized rhodane 99.9 2.8E-25 9.7E-30 134.5 6.3 98 5-110 3-107 (108)
4 3eme_A Rhodanese-like domain p 99.9 2.5E-25 8.5E-30 133.5 5.9 94 5-104 1-102 (103)
5 3foj_A Uncharacterized protein 99.9 2.6E-25 8.8E-30 132.9 5.9 92 5-102 1-100 (100)
6 1gmx_A GLPE protein; transfera 99.9 1.1E-24 3.6E-29 131.8 4.9 97 4-106 3-106 (108)
7 3hix_A ALR3790 protein; rhodan 99.9 2.3E-24 7.8E-29 130.0 4.6 95 11-110 1-105 (106)
8 3ilm_A ALR3790 protein; rhodan 99.9 5.6E-24 1.9E-28 134.4 5.6 96 7-107 1-106 (141)
9 2hhg_A Hypothetical protein RP 99.9 1.3E-23 4.4E-28 132.0 6.6 99 4-107 20-136 (139)
10 1qxn_A SUD, sulfide dehydrogen 99.9 1.8E-23 6.1E-28 131.4 6.1 99 4-107 21-132 (137)
11 3flh_A Uncharacterized protein 99.9 1.4E-22 4.9E-27 125.2 5.3 96 6-106 15-121 (124)
12 3nhv_A BH2092 protein; alpha-b 99.9 9E-23 3.1E-27 129.2 4.4 98 6-109 16-125 (144)
13 3d1p_A Putative thiosulfate su 99.9 1.6E-22 5.6E-27 127.0 4.5 96 4-104 21-138 (139)
14 1tq1_A AT5G66040, senescence-a 99.9 4.9E-23 1.7E-27 128.1 1.9 94 4-103 16-128 (129)
15 1wv9_A Rhodanese homolog TT165 99.9 8E-23 2.8E-27 120.7 2.2 88 5-99 1-94 (94)
16 2j6p_A SB(V)-AS(V) reductase; 99.8 5.7E-21 1.9E-25 121.8 8.1 100 4-105 3-123 (152)
17 2k0z_A Uncharacterized protein 99.8 4.2E-22 1.4E-26 120.8 1.4 90 7-106 6-104 (110)
18 3hzu_A Thiosulfate sulfurtrans 99.8 3.9E-20 1.3E-24 130.3 9.9 99 5-107 39-162 (318)
19 1e0c_A Rhodanese, sulfurtransf 99.8 3.5E-20 1.2E-24 127.5 7.4 100 5-108 8-133 (271)
20 3i2v_A Adenylyltransferase and 99.8 6.9E-21 2.3E-25 117.5 3.4 95 6-101 1-122 (127)
21 3g5j_A Putative ATP/GTP bindin 99.8 3.9E-20 1.4E-24 114.9 6.3 86 4-98 3-130 (134)
22 1uar_A Rhodanese; sulfurtransf 99.8 5.7E-20 2E-24 127.3 6.9 101 3-107 5-130 (285)
23 1c25_A CDC25A; hydrolase, cell 99.8 2.6E-20 8.9E-25 119.5 4.3 103 4-107 21-150 (161)
24 2a2k_A M-phase inducer phospha 99.8 7.5E-20 2.6E-24 118.9 6.4 102 4-106 22-151 (175)
25 1urh_A 3-mercaptopyruvate sulf 99.8 1.4E-19 4.8E-24 125.1 8.2 99 6-108 4-138 (280)
26 3aay_A Putative thiosulfate su 99.8 8.5E-20 2.9E-24 125.9 6.9 99 5-107 5-128 (277)
27 1yt8_A Thiosulfate sulfurtrans 99.8 6.8E-20 2.3E-24 136.7 6.7 103 1-108 1-114 (539)
28 3f4a_A Uncharacterized protein 99.8 3E-20 1E-24 120.4 4.0 99 4-104 29-158 (169)
29 1yt8_A Thiosulfate sulfurtrans 99.8 1.5E-19 5.3E-24 134.8 7.5 100 4-108 375-481 (539)
30 1qb0_A Protein (M-phase induce 99.8 1.6E-19 5.4E-24 120.7 6.7 102 4-106 42-171 (211)
31 2fsx_A RV0390, COG0607: rhodan 99.8 6.3E-20 2.2E-24 116.4 4.5 97 5-106 4-141 (148)
32 2vsw_A Dual specificity protei 99.8 4.1E-20 1.4E-24 117.7 3.2 100 6-107 4-136 (153)
33 4f67_A UPF0176 protein LPG2838 99.8 1.8E-19 6.2E-24 123.9 6.5 93 4-101 120-225 (265)
34 3olh_A MST, 3-mercaptopyruvate 99.8 2.2E-19 7.7E-24 125.6 6.9 99 5-107 21-160 (302)
35 1e0c_A Rhodanese, sulfurtransf 99.8 3.1E-19 1E-23 122.8 7.1 94 6-104 147-271 (271)
36 1vee_A Proline-rich protein fa 99.8 4.4E-19 1.5E-23 110.8 7.1 100 5-109 4-129 (134)
37 3op3_A M-phase inducer phospha 99.8 1.5E-19 5.2E-24 121.2 4.6 101 4-105 55-183 (216)
38 2ouc_A Dual specificity protei 99.8 1.1E-19 3.9E-24 113.7 3.8 95 7-106 2-140 (142)
39 3tp9_A Beta-lactamase and rhod 99.8 1.9E-19 6.6E-24 132.3 4.5 95 5-104 373-474 (474)
40 2jtq_A Phage shock protein E; 99.8 2E-19 7E-24 104.1 3.6 70 21-96 1-79 (85)
41 1rhs_A Sulfur-substituted rhod 99.8 6.8E-19 2.3E-23 122.6 6.7 100 5-108 7-146 (296)
42 1urh_A 3-mercaptopyruvate sulf 99.7 1.6E-18 5.4E-23 119.8 5.1 94 6-104 152-278 (280)
43 1rhs_A Sulfur-substituted rhod 99.7 3.5E-18 1.2E-22 119.1 6.6 96 6-106 160-290 (296)
44 1hzm_A Dual specificity protei 99.7 4.5E-19 1.5E-23 112.8 1.9 94 4-99 14-143 (154)
45 2wlr_A Putative thiosulfate su 99.7 5.3E-18 1.8E-22 123.3 7.2 101 6-111 272-413 (423)
46 1uar_A Rhodanese; sulfurtransf 99.7 1.1E-17 3.8E-22 115.7 6.9 95 6-105 146-283 (285)
47 1okg_A Possible 3-mercaptopyru 99.7 8.4E-18 2.9E-22 120.7 6.2 97 5-108 13-147 (373)
48 3olh_A MST, 3-mercaptopyruvate 99.7 1.5E-18 5E-23 121.4 1.6 92 6-102 175-299 (302)
49 3aay_A Putative thiosulfate su 99.7 1.7E-17 5.7E-22 114.4 6.0 92 8-105 146-276 (277)
50 2eg4_A Probable thiosulfate su 99.7 2E-17 7E-22 111.4 6.1 88 6-104 121-230 (230)
51 3hzu_A Thiosulfate sulfurtrans 99.7 1.8E-17 6E-22 116.7 5.3 96 6-107 179-311 (318)
52 2gwf_A Ubiquitin carboxyl-term 99.7 2.9E-17 1E-21 105.1 5.0 99 4-103 18-150 (157)
53 1whb_A KIAA0055; deubiqutinati 99.7 3.1E-17 1.1E-21 104.9 5.0 101 4-105 13-147 (157)
54 3ntd_A FAD-dependent pyridine 99.7 2.4E-17 8.1E-22 122.9 4.6 88 4-99 471-565 (565)
55 2wlr_A Putative thiosulfate su 99.7 1E-16 3.5E-21 116.5 7.1 96 6-106 124-252 (423)
56 3tg1_B Dual specificity protei 99.7 2.7E-17 9.3E-22 105.3 3.6 95 4-103 9-147 (158)
57 3ics_A Coenzyme A-disulfide re 99.7 3.5E-17 1.2E-21 122.7 3.5 89 4-99 487-582 (588)
58 3utn_X Thiosulfate sulfurtrans 99.6 1.1E-15 3.6E-20 108.0 5.7 97 5-106 27-162 (327)
59 3r2u_A Metallo-beta-lactamase 99.6 9.6E-17 3.3E-21 118.0 0.0 80 13-97 379-465 (466)
60 3tp9_A Beta-lactamase and rhod 99.6 1.1E-15 3.7E-20 112.4 3.4 95 4-105 271-373 (474)
61 1okg_A Possible 3-mercaptopyru 99.5 3.6E-15 1.2E-19 107.0 3.2 82 19-105 172-295 (373)
62 2eg4_A Probable thiosulfate su 99.5 1.6E-14 5.5E-19 97.2 4.4 78 19-106 4-105 (230)
63 3utn_X Thiosulfate sulfurtrans 99.3 1.9E-13 6.6E-18 96.5 1.7 89 7-100 185-318 (327)
64 3r2u_A Metallo-beta-lactamase 99.1 5.8E-11 2E-15 87.3 3.0 72 20-96 295-375 (466)
65 2f46_A Hypothetical protein; s 95.9 0.014 4.7E-07 36.4 4.8 42 7-48 29-83 (156)
66 1v8c_A MOAD related protein; r 95.7 0.00088 3E-08 42.9 -1.4 27 22-52 122-148 (168)
67 2xzm_K RPS14E; ribosome, trans 40.2 51 0.0017 20.4 4.2 30 61-90 69-98 (151)
68 3j20_M 30S ribosomal protein S 39.6 38 0.0013 20.6 3.6 29 61-89 55-83 (137)
69 2gjh_A Designed protein; oblig 36.1 43 0.0015 16.6 3.1 22 66-87 16-37 (62)
70 1qys_A TOP7; alpha-beta, novel 35.9 56 0.0019 17.9 3.5 25 65-89 59-83 (106)
71 2hiy_A Hypothetical protein; C 34.6 27 0.00093 22.2 2.4 20 70-89 24-44 (183)
72 1pp7_U 39 kDa initiator bindin 28.3 9.1 0.00031 23.0 -0.5 29 76-104 86-114 (131)
73 2jvf_A De novo protein M7; tet 27.2 79 0.0027 17.0 4.8 26 66-91 62-87 (96)
74 3to5_A CHEY homolog; alpha(5)b 27.2 93 0.0032 18.2 3.9 23 73-95 28-50 (134)
75 3lub_A Putative creatinine ami 26.3 80 0.0027 21.0 3.8 21 36-56 82-102 (254)
76 3rof_A Low molecular weight pr 25.6 47 0.0016 20.5 2.4 36 60-95 13-49 (158)
77 1v7z_A Creatininase, creatinin 25.1 69 0.0024 21.3 3.3 23 36-58 82-104 (260)
78 2vqe_K 30S ribosomal protein S 23.2 1E+02 0.0034 18.5 3.4 43 61-103 56-106 (129)
79 3r8n_K 30S ribosomal protein S 22.5 1.2E+02 0.0042 17.7 3.6 43 61-103 46-96 (117)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.93 E-value=3.7e-26 Score=137.46 Aligned_cols=94 Identities=22% Similarity=0.447 Sum_probs=79.8
Q ss_pred CcccCHHHHHhhhc-CCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh------c-cChhhhHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE------V-RGPTCAKRLANYLDEV 76 (117)
Q Consensus 5 ~~~is~~e~~~~~~-~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~------~-~g~~~a~~~~~~l~~~ 76 (117)
+..|+++|+++.+. .++++|||||++.||..||||||+|||.+.|...+.+++++ | +|.+ |..++..|.+
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~ivv~C~~G~r-S~~aa~~L~~- 78 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFNKNEIYYIVCAGGVR-SAKVVEYLEA- 78 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCCTTSEEEEECSSSSH-HHHHHHHHHT-
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhhhhcCCCeEEEECCCCHH-HHHHHHHHHH-
Confidence 46799999998775 45789999999999999999999999999998877777665 4 5777 6677777766
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCccc
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
.||+++ .|.||+.+|..+|+|+++
T Consensus 79 ---~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 79 ---NGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp ---TTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred ---cCCCEE-EecChHHHHHHCCCccee
Confidence 999655 699999999999999975
No 2
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.92 E-value=2.5e-26 Score=146.78 Aligned_cols=113 Identities=63% Similarity=1.061 Sum_probs=93.0
Q ss_pred CCCCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHh----hh------c--cChhhhHHH
Q 033515 2 ARSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLI----QE------V--RGPTCAKRL 69 (117)
Q Consensus 2 ~~~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~----~~------~--~g~~~a~~~ 69 (117)
++.+..|+++++.++++.++++|||||++.||..||||||+|||...+...+.++. +. | .|.+ +..+
T Consensus 24 ~~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~r-s~~a 102 (152)
T 1t3k_A 24 ARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQVR-GPTC 102 (152)
T ss_dssp CSSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSSS-HHHH
T ss_pred cCCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcc-hHHH
Confidence 34678999999999887678999999999999999999999999998876666552 22 3 5555 5555
Q ss_pred HHHHHH----HHHhCCCceEEEccccHHHHHhCCCCccccCCCCCchhhh
Q 033515 70 ANYLDE----VKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCKEENQ 115 (117)
Q Consensus 70 ~~~l~~----~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~~~~~~~~ 115 (117)
+..|.+ +|+..||++|++|+||+.+|..+|+|+++....+|++.|.
T Consensus 103 a~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~c~~~~~ 152 (152)
T 1t3k_A 103 ARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPCKGDCA 152 (152)
T ss_dssp HHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSCSSCSSCCC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCCCCCCCCCC
Confidence 555532 3456899999999999999999999999999999999884
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.92 E-value=2.8e-25 Score=134.49 Aligned_cols=98 Identities=22% Similarity=0.351 Sum_probs=81.1
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEVK 77 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~l 77 (117)
++.|+++++.+++++ ++|||||++.||..||||||+|||...+......+.++ .+|.+ |..++..|..
T Consensus 3 ~~~is~~el~~~l~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~ivvyC~~G~r-s~~aa~~L~~-- 77 (108)
T 3gk5_A 3 YRSINAADLYENIKA--YTVLDVREPFELIFGSIANSINIPISELREKWKILERDKKYAVICAHGNR-SAAAVEFLSQ-- 77 (108)
T ss_dssp CCEECHHHHHHTTTT--CEEEECSCHHHHTTCBCTTCEECCHHHHHHHGGGSCTTSCEEEECSSSHH-HHHHHHHHHT--
T ss_pred ccEeCHHHHHHHHcC--CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhCCCCCeEEEEcCCCcH-HHHHHHHHHH--
Confidence 578999999999875 89999999999999999999999999888877777554 45666 6667776666
Q ss_pred HhCCCceEEEccccHHHHHhCCCCccccCCCCC
Q 033515 78 EDTGINSIFVLERGFKGWEASGKPVCRCTDVPC 110 (117)
Q Consensus 78 ~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~~~ 110 (117)
+|| +|++|+||+.+|..+|.|+++....|.
T Consensus 78 --~G~-~v~~l~GG~~~W~~~~~~~~~~~~~~~ 107 (108)
T 3gk5_A 78 --LGL-NIVDVEGGIQSWIEEGYPVVLEHHHHH 107 (108)
T ss_dssp --TTC-CEEEETTHHHHHHHTTCCCBCC-----
T ss_pred --cCC-CEEEEcCcHHHHHHcCCCCCCCCCCcC
Confidence 999 999999999999999999998877664
No 4
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.92 E-value=2.5e-25 Score=133.54 Aligned_cols=94 Identities=22% Similarity=0.433 Sum_probs=80.3
Q ss_pred CcccCHHHHHhhh-cCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh------c-cChhhhHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLK-RRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE------V-RGPTCAKRLANYLDEV 76 (117)
Q Consensus 5 ~~~is~~e~~~~~-~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~------~-~g~~~a~~~~~~l~~~ 76 (117)
++.|+++++.+++ ++++++|||||++.||..||||||+|||...+......+++. | +|.+ |..++..|..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~iv~yC~~g~r-s~~a~~~L~~- 78 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFNKNEIYYIVCAGGVR-SAKVVEYLEA- 78 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCCTTSEEEEECSSSSH-HHHHHHHHHT-
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhCCCCCeEEEECCCChH-HHHHHHHHHH-
Confidence 3679999999988 456899999999999999999999999999988777777554 3 5555 6677777766
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCccc
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
.|| +|++|+||+.+|..+|+|+++
T Consensus 79 ---~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 79 ---NGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp ---TTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred ---CCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 999 999999999999999999875
No 5
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.92 E-value=2.6e-25 Score=132.88 Aligned_cols=92 Identities=21% Similarity=0.366 Sum_probs=78.8
Q ss_pred CcccCHHHHHhhhc-CCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEV 76 (117)
Q Consensus 5 ~~~is~~e~~~~~~-~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~ 76 (117)
++.|+++|+.++++ +++++|||||++.||..||||||+|||.+.+......++++ .+|.+ |..++..|..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~ivvyC~~g~r-s~~a~~~L~~- 78 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFNDNETYYIICKAGGR-SAQVVQYLEQ- 78 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGSCTTSEEEEECSSSHH-HHHHHHHHHT-
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhCCCCCcEEEEcCCCch-HHHHHHHHHH-
Confidence 36799999999884 56899999999999999999999999999988777776654 35666 6677777766
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCc
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPV 102 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~ 102 (117)
.|| +|++|+||+.+|..+|+|+
T Consensus 79 ---~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 79 ---NGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp ---TTC-EEEEETTHHHHHCSSSCBC
T ss_pred ---CCC-CEEEecccHHHHHHcCCCC
Confidence 999 9999999999999999885
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.90 E-value=1.1e-24 Score=131.81 Aligned_cols=97 Identities=20% Similarity=0.360 Sum_probs=83.1
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEV 76 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~ 76 (117)
.++.|+++++.+++++++.+|||||++.||..||||||+|||...+...+..+++. .+|.+ +..++..|..
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~ivvyc~~g~r-s~~a~~~L~~- 80 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNS-SKGAAQYLLQ- 80 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHHHHHHHHHHSCTTSCEEEECSSSSH-HHHHHHHHHH-
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHHHhcCCCCCEEEEcCCCch-HHHHHHHHHH-
Confidence 35789999999998866799999999999999999999999999888877776554 35666 6677777777
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
.||++|++|+||+.+|... +|++.+.
T Consensus 81 ---~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 81 ---QGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp ---HTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred ---cCCceEEEecCCHHHHHHh-CCccccc
Confidence 9999999999999999998 9988654
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.90 E-value=2.3e-24 Score=130.04 Aligned_cols=95 Identities=25% Similarity=0.408 Sum_probs=70.8
Q ss_pred HHHHhhhc--CCCeEEEecCCCCcccCCcccccccCCccchhHHH-HHHhhh------c-cChhhhHHHHHHHHHHHHhC
Q 033515 11 SQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKI-FDLIQE------V-RGPTCAKRLANYLDEVKEDT 80 (117)
Q Consensus 11 ~e~~~~~~--~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~-~~~~~~------~-~g~~~a~~~~~~l~~~l~~~ 80 (117)
+||+++++ +++++|||||++.||..||||||+|||...+.... ..+.+. | .|.+ +..++..|.. .
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~l~~~~~ivvyc~~g~r-s~~a~~~L~~----~ 75 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSLEKSRDIYVYGAGDEQ-TSQAVNLLRS----A 75 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHHHHSCTTSCEEEECSSHHH-HHHHHHHHHH----T
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHHhcCCCCCeEEEEECCCCh-HHHHHHHHHH----c
Confidence 36777776 34689999999999999999999999999887755 444443 4 4555 6667777766 9
Q ss_pred CCceEEEccccHHHHHhCCCCccccCCCCC
Q 033515 81 GINSIFVLERGFKGWEASGKPVCRCTDVPC 110 (117)
Q Consensus 81 G~~~v~~l~gG~~~W~~~g~~~~~~~~~~~ 110 (117)
||++|++|+||+.+|..+|+|+++....|.
T Consensus 76 G~~~v~~l~GG~~~W~~~g~~~~~~~~~~~ 105 (106)
T 3hix_A 76 GFEHVSELKGGLAAWKAIGGPTELEHHHHH 105 (106)
T ss_dssp TCSCEEECTTHHHHHHHTTCCEEECCEEEC
T ss_pred CCcCEEEecCCHHHHHHCCCCCCCCCCCCC
Confidence 999999999999999999999998776554
No 8
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.89 E-value=5.6e-24 Score=134.37 Aligned_cols=96 Identities=25% Similarity=0.437 Sum_probs=78.8
Q ss_pred ccCHHHHHhhhc--CCCeEEEecCCCCcccCCcccccccCCccchhHHH-HHHhhh------c-cChhhhHHHHHHHHHH
Q 033515 7 YISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKI-FDLIQE------V-RGPTCAKRLANYLDEV 76 (117)
Q Consensus 7 ~is~~e~~~~~~--~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~-~~~~~~------~-~g~~~a~~~~~~l~~~ 76 (117)
.|+++++.++++ .++++|||||++.||..||||||+|||...+.... ..+.+. | .|.+ |..++..|..
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~l~~~~~ivvyC~~g~r-s~~aa~~L~~- 78 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSLEKSRDIYVYGAGDEQ-TSQAVNLLRS- 78 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHHTTSCTTSEEEEECSSHHH-HHHHHHHHHH-
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHHHhcCCCCCeEEEEECCChH-HHHHHHHHHH-
Confidence 389999999987 34689999999999999999999999999887765 344443 4 4555 6667777766
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
.||++|++|+||+.+|..+|+|+++...
T Consensus 79 ---~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 79 ---AGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp ---TTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred ---cCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 9999999999999999999999998764
No 9
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.3e-23 Score=131.98 Aligned_cols=99 Identities=20% Similarity=0.392 Sum_probs=79.3
Q ss_pred CCcccCHHHHHhhhc--CCCeEEEecCCCCcccC-CcccccccCCccchhHHHH--------HHhhh-------ccChhh
Q 033515 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYD-GHITGSLHYPSDSFTDKIF--------DLIQE-------VRGPTC 65 (117)
Q Consensus 4 ~~~~is~~e~~~~~~--~~~~~iiDvR~~~e~~~-ghIpga~~ip~~~l~~~~~--------~~~~~-------~~g~~~ 65 (117)
.+..|+++++.++++ +++++|||||++.||.. ||||||+|||...+..... .+.+. ..|.+
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~r- 98 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLR- 98 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSHH-
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCChH-
Confidence 467899999999987 56899999999999998 9999999999988765442 22332 45666
Q ss_pred hHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 66 AKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 66 a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
|..++..|.. .||++|++|+||+.+|..+|+|++++..
T Consensus 99 s~~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 99 SALAAKTAQD----MGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp HHHHHHHHHH----HTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred HHHHHHHHHH----cCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 6666777766 9999999999999999999999987643
No 10
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.89 E-value=1.8e-23 Score=131.44 Aligned_cols=99 Identities=23% Similarity=0.354 Sum_probs=83.5
Q ss_pred CCcccCHHHHHhhhc-CCCeEEEecCCCCcccC-Cc--ccccccCCccchhH--HHHHHhhh-------ccChhhhHHHH
Q 033515 4 SISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GH--ITGSLHYPSDSFTD--KIFDLIQE-------VRGPTCAKRLA 70 (117)
Q Consensus 4 ~~~~is~~e~~~~~~-~~~~~iiDvR~~~e~~~-gh--Ipga~~ip~~~l~~--~~~~~~~~-------~~g~~~a~~~~ 70 (117)
.+..|+++++.++++ .++++|||||++.||.. || ||||+|||...+.. .+..+.+. .+|.+ |..++
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~~~~~~l~~~~~ivvyC~~G~r-S~~aa 99 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVVVFCKTAAR-AALAG 99 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHHHHHHCCCTTSCEEEECCSSSC-HHHHH
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhHHhhccCCCCCeEEEEcCCCcH-HHHHH
Confidence 567899999999987 67799999999999999 99 99999999998875 44444443 45666 66777
Q ss_pred HHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 71 NYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 71 ~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
..|.. .||++|++|+||+.+|..+|+|++++..
T Consensus 100 ~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 132 (137)
T 1qxn_A 100 KTLRE----YGFKTIYNSEGGMDKWLEEGLPSLDRSH 132 (137)
T ss_dssp HHHHH----HTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred HHHHH----cCCcceEEEcCcHHHHHHCCCCcccccc
Confidence 77777 9999999999999999999999987643
No 11
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.87 E-value=1.4e-22 Score=125.24 Aligned_cols=96 Identities=22% Similarity=0.366 Sum_probs=78.9
Q ss_pred cccCHHHHHhhhcCC--CeEEEecCCCCcc-cCCcccccccCCccchhHHHHHHhhh------c-cChhh-hHHHHHHHH
Q 033515 6 SYISGSQLLSLKRRP--NIAVIDVRDDERS-YDGHITGSLHYPSDSFTDKIFDLIQE------V-RGPTC-AKRLANYLD 74 (117)
Q Consensus 6 ~~is~~e~~~~~~~~--~~~iiDvR~~~e~-~~ghIpga~~ip~~~l~~~~~~~~~~------~-~g~~~-a~~~~~~l~ 74 (117)
..|+++|+.++++.+ +++|||||++.|| ..||||||+|||...+...+..++++ | .|.+. |..++..|.
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~l~~~~~ivvyC~~g~r~~s~~a~~~L~ 94 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGELDPAKTYVVYDWTGGTTLGKTALLVLL 94 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGGSCTTSEEEEECSSSSCSHHHHHHHHHH
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhcCCCCCeEEEEeCCCCchHHHHHHHHHH
Confidence 469999999988743 4999999999998 99999999999999988877777654 4 45542 566777777
Q ss_pred HHHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 75 EVKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 75 ~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
+ .||+ |++|+||+.+|...|+|+.+..
T Consensus 95 ~----~G~~-v~~l~GG~~~W~~~~~p~~~~~ 121 (124)
T 3flh_A 95 S----AGFE-AYELAGALEGWKGMQLPLEHHH 121 (124)
T ss_dssp H----HTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred H----cCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence 6 9996 9999999999999999987654
No 12
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.87 E-value=9e-23 Score=129.21 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=79.9
Q ss_pred cccCHHHHHhhhcCC--CeEEEecCCCCcccCCcccccccCCccchhH-HHHHHhhh------c-cC--hhhhHHHHHHH
Q 033515 6 SYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLIQE------V-RG--PTCAKRLANYL 73 (117)
Q Consensus 6 ~~is~~e~~~~~~~~--~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~-~~~~~~~~------~-~g--~~~a~~~~~~l 73 (117)
..|+++|+.++++++ +++|||||++.||..||||||+|||...+.. ....+.++ | .| .+ |..++..|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~l~~~~~ivvyC~~g~~~r-s~~aa~~L 94 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNG-ATKAAAKF 94 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTTTTCCTTSEEEEECSCTTCCH-HHHHHHHH
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHHhhCCCCCeEEEEECCCCccH-HHHHHHHH
Confidence 458999999988754 7999999999999999999999999998763 45555444 4 34 35 66777777
Q ss_pred HHHHHhCCCceEEEccccHHHHHhCCCCccccCCCC
Q 033515 74 DEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 109 (117)
Q Consensus 74 ~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~~ 109 (117)
.. +|| +|++|+||+.+|..+|+|+++....+
T Consensus 95 ~~----~G~-~v~~l~GG~~~W~~~g~pv~~~~~~~ 125 (144)
T 3nhv_A 95 AQ----LGF-RVKELIGGIEYWRKENGEVEGTLGAK 125 (144)
T ss_dssp HH----TTC-EEEEEESHHHHHHHTTCCCBSSSGGG
T ss_pred HH----CCC-eEEEeCCcHHHHHHCCCCccCCCCCC
Confidence 77 999 69999999999999999999875433
No 13
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-22 Score=127.05 Aligned_cols=96 Identities=18% Similarity=0.270 Sum_probs=77.2
Q ss_pred CCcccCHHHHHhhhc--CCCeEEEecCCCCcccCCcccccccCCccchhHHHH----HH---------hhh------c-c
Q 033515 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIF----DL---------IQE------V-R 61 (117)
Q Consensus 4 ~~~~is~~e~~~~~~--~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~----~~---------~~~------~-~ 61 (117)
.+..|+++++.++++ .++++|||||++.||..||||||+|||...+..... ++ .+. | +
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~ 100 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCAS 100 (139)
T ss_dssp CCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSS
T ss_pred CcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCC
Confidence 578899999999986 367999999999999999999999999987753221 11 122 3 4
Q ss_pred ChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccc
Q 033515 62 GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 62 g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
|.+ |..++..|.. .||++|++|+||+.+|...|+|+..
T Consensus 101 G~r-s~~aa~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 101 GKR-GGEAQKVASS----HGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SHH-HHHHHHHHHT----TTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred Cch-HHHHHHHHHH----cCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 666 6666776666 9999999999999999999998754
No 14
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.86 E-value=4.9e-23 Score=128.13 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=75.2
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCcc-----------ch-hHHHHHHhhh-------ccChh
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSD-----------SF-TDKIFDLIQE-------VRGPT 64 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~-----------~l-~~~~~~~~~~-------~~g~~ 64 (117)
....|+++++.++++ ++++|||||++.||..||||||+|||.. .+ ......+.+. .+|.+
T Consensus 16 ~~~~is~~e~~~~l~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~r 94 (129)
T 1tq1_A 16 VPSSVSVTVAHDLLL-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGR 94 (129)
T ss_dssp CCEEEEHHHHHHHHH-HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSH
T ss_pred CCcccCHHHHHHHhc-CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCcH
Confidence 568899999999887 5789999999999999999999999983 22 1212223332 35666
Q ss_pred hhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCcc
Q 033515 65 CAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVC 103 (117)
Q Consensus 65 ~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~ 103 (117)
|..++..|.. .||++|++|+||+.+|..+|+|++
T Consensus 95 -s~~aa~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 95 -SIKATTDLLH----AGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp -HHHHHHHHHH----HHCCSEEEEECCHHHHHHHTCCCC
T ss_pred -HHHHHHHHHH----cCCCCeEEeCCcHHHHHhCCCCCC
Confidence 6677777777 999999999999999999999875
No 15
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.86 E-value=8e-23 Score=120.71 Aligned_cols=88 Identities=19% Similarity=0.270 Sum_probs=66.5
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHh-hh-----ccChhhhHHHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLI-QE-----VRGPTCAKRLANYLDEVKE 78 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~-~~-----~~g~~~a~~~~~~l~~~l~ 78 (117)
++.|+++++.+++++ +++|||||++.||..||||||+|||...+...+..++ +. .+|.+ |..++..|..
T Consensus 1 ~~~is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~l~~~~ivvyC~~g~r-s~~a~~~L~~--- 75 (94)
T 1wv9_A 1 MRKVRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHGLPRRPLLLVCEKGLL-SQVAALYLEA--- 75 (94)
T ss_dssp -CEECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCCCCSSCEEEECSSSHH-HHHHHHHHHH---
T ss_pred CCcCCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHhCCCCCEEEEcCCCCh-HHHHHHHHHH---
Confidence 357899999998875 7899999999999999999999999988765443332 22 45666 6677777777
Q ss_pred hCCCceEEEccccHHHHHhCC
Q 033515 79 DTGINSIFVLERGFKGWEASG 99 (117)
Q Consensus 79 ~~G~~~v~~l~gG~~~W~~~g 99 (117)
.||+ |++|+||+.+|..+|
T Consensus 76 -~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 76 -EGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp -HTCC-EEEETTGGGCC----
T ss_pred -cCCc-EEEEcccHHHHHhCc
Confidence 9998 999999999998764
No 16
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.84 E-value=5.7e-21 Score=121.84 Aligned_cols=100 Identities=26% Similarity=0.330 Sum_probs=75.3
Q ss_pred CCcccCHHHHHhhhcCC----CeEEEecCCCCcccCCcccccccCCccchhH-HHHHHh-----hh-------c--cChh
Q 033515 4 SISYISGSQLLSLKRRP----NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLI-----QE-------V--RGPT 64 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~----~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~-~~~~~~-----~~-------~--~g~~ 64 (117)
.+..|+++++.++++.+ +++|||||++ ||..||||||+|||...+.. .++++. .. | +|.+
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~r 81 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLVR 81 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCCc
Confidence 45789999999998753 7999999999 99999999999999987653 333332 11 5 3556
Q ss_pred hhHHHHHHHHHHHHhCCC--ceEEEccccHHHHHhCCCCcccc
Q 033515 65 CAKRLANYLDEVKEDTGI--NSIFVLERGFKGWEASGKPVCRC 105 (117)
Q Consensus 65 ~a~~~~~~l~~~l~~~G~--~~v~~l~gG~~~W~~~g~~~~~~ 105 (117)
+..++..+.+.|+..|| .+|++|+||+.+|..++.++...
T Consensus 82 -s~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~~ 123 (152)
T 2j6p_A 82 -APKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRPD 123 (152)
T ss_dssp -HHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCGG
T ss_pred -cHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCCC
Confidence 54555333334556997 58999999999999998877643
No 17
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.83 E-value=4.2e-22 Score=120.82 Aligned_cols=90 Identities=18% Similarity=0.150 Sum_probs=72.7
Q ss_pred ccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHH--Hhhh-------ccChhhhHHHHHHHHHHH
Q 033515 7 YISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFD--LIQE-------VRGPTCAKRLANYLDEVK 77 (117)
Q Consensus 7 ~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~--~~~~-------~~g~~~a~~~~~~l~~~l 77 (117)
.|+++++ ..++++|||||++.||..||||||+|||...+...... +.+. ..|.+ |..++..|..
T Consensus 6 ~is~~el----~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~ivvyC~~G~r-s~~aa~~L~~-- 78 (110)
T 2k0z_A 6 AISLEEV----NFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFLSQHKDKKVLLHCRAGRR-ALDAAKSMHE-- 78 (110)
T ss_dssp EEETTTC----CGGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHHHSCSSSCEEEECSSSHH-HHHHHHHHHH--
T ss_pred eeCHHHh----ccCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhcccCCCCEEEEEeCCCch-HHHHHHHHHH--
Confidence 5666665 23578999999999999999999999999998876654 3333 45666 6677777777
Q ss_pred HhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 78 EDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 78 ~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
.||++ ++|+||+.+|..+|+|++++.
T Consensus 79 --~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 79 --LGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp --TTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred --CCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 99999 999999999999999998754
No 18
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.82 E-value=3.9e-20 Score=130.27 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=77.5
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCCCCc-ccCCcccccccCCcc---------------chhHHHHHH--hhh------c
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRDDER-SYDGHITGSLHYPSD---------------SFTDKIFDL--IQE------V 60 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~~~e-~~~ghIpga~~ip~~---------------~l~~~~~~~--~~~------~ 60 (117)
...|+++++.+++++++++|||||++.| |..||||||+|||.. .|...+..+ .++ |
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 4579999999999877899999999976 999999999999974 344444443 222 3
Q ss_pred -cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 61 -RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 61 -~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
.|...+..+++.|+. +||++|++|+||+.+|..+|+|+++...
T Consensus 119 ~~g~~~a~~a~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTL----FGHADVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp SGGGHHHHHHHHHHHH----TTCSCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred CCCCccHHHHHHHHHH----cCCCceEEccCCHHHHhhcCCCcccCCC
Confidence 344225566666666 9999999999999999999999988643
No 19
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.81 E-value=3.5e-20 Score=127.50 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=79.6
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhH-----------------HHHHH--hhh------
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----------------KIFDL--IQE------ 59 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~-----------------~~~~~--~~~------ 59 (117)
.+.|+++++.+++++++++|||||++.||..||||||+|||...+.. ++..+ .+.
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 45899999999997678999999999999999999999999876532 23332 222
Q ss_pred c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 60 V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 60 ~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
| .|...+..++..|.. +||++|++|+||+.+|..+|+|+++....
T Consensus 88 c~~g~~~s~~a~~~L~~----~G~~~v~~L~GG~~~w~~~g~p~~~~~~~ 133 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDV----IGQQRYHYLNGGLTAWLAEDRPLSRELPA 133 (271)
T ss_dssp CSSSSHHHHHHHHHHHH----TTCCCEEEETTHHHHHHHTTCCCBCCCCC
T ss_pred cCCCCccHHHHHHHHHH----cCCCCeEEecCCHHHHHHcCCCccCCCCC
Confidence 3 354226666776766 99999999999999999999999876554
No 20
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.81 E-value=6.9e-21 Score=117.54 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=70.8
Q ss_pred cccCHHHHHhhhcCC-CeEEEecCCCCcccCCcccccccCCccchhHHHHH--------H----hh-------h----c-
Q 033515 6 SYISGSQLLSLKRRP-NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFD--------L----IQ-------E----V- 60 (117)
Q Consensus 6 ~~is~~e~~~~~~~~-~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~--------~----~~-------~----~- 60 (117)
..|+++|+.++++.+ +++|||||++.||..||||||+|||...+...... + .+ . |
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~ 80 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK 80 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEECS
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEEcC
Confidence 368999999998744 58999999999999999999999999876542211 1 11 2 3
Q ss_pred cChhhhHHHHHHHHHH--HHhCCCceEEEccccHHHHHhCCCC
Q 033515 61 RGPTCAKRLANYLDEV--KEDTGINSIFVLERGFKGWEASGKP 101 (117)
Q Consensus 61 ~g~~~a~~~~~~l~~~--l~~~G~~~v~~l~gG~~~W~~~g~~ 101 (117)
.|.+ +..++..|... +...||.+|++|+||+.+|..+..|
T Consensus 81 ~G~r-s~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 81 LGND-SQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp SSSH-HHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCCc-HHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 5666 66667777660 0112788999999999999987654
No 21
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.81 E-value=3.9e-20 Score=114.90 Aligned_cols=86 Identities=21% Similarity=0.362 Sum_probs=66.0
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchh---------------------------------
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFT--------------------------------- 50 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~--------------------------------- 50 (117)
.+..|+++++.+ .++++|||||++.||..||||||+|||...+.
T Consensus 3 ~~~~i~~~el~~---~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (134)
T 3g5j_A 3 AMSVIKIEKALK---LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIY 79 (134)
T ss_dssp --CEECHHHHTT---CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHH
T ss_pred CccccCHHHHHh---cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHH
Confidence 567899999887 46899999999999999999999999996432
Q ss_pred HHHHHHhh--h-----c--cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhC
Q 033515 51 DKIFDLIQ--E-----V--RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 98 (117)
Q Consensus 51 ~~~~~~~~--~-----~--~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~ 98 (117)
..+..+.+ . | .|.+ |..++..|.. +|| +|++|+||+.+|.+.
T Consensus 80 ~~~~~~~~~~~~ivvyC~~~G~r-s~~a~~~L~~----~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 80 LQAAELALNYDNIVIYCARGGMR-SGSIVNLLSS----LGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHHHTTCSEEEEECSSSSHH-HHHHHHHHHH----TTC-CCEEETTHHHHHHHH
T ss_pred HHHHHhccCCCeEEEEECCCChH-HHHHHHHHHH----cCC-ceEEEeCcHHHHHHH
Confidence 12223322 1 5 3556 6667777776 999 999999999999764
No 22
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=5.7e-20 Score=127.26 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=77.8
Q ss_pred CCCcccCHHHHHhhhcCCCeEEEecC-CCCcccCCcccccccCCccc---------------hhHHHHHH--hhh-----
Q 033515 3 RSISYISGSQLLSLKRRPNIAVIDVR-DDERSYDGHITGSLHYPSDS---------------FTDKIFDL--IQE----- 59 (117)
Q Consensus 3 ~~~~~is~~e~~~~~~~~~~~iiDvR-~~~e~~~ghIpga~~ip~~~---------------l~~~~~~~--~~~----- 59 (117)
.....|+++++.+++++++++||||| ++.||..||||||+|||... |...+..+ .++
T Consensus 5 ~~~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv 84 (285)
T 1uar_A 5 HPEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL 84 (285)
T ss_dssp CGGGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 34468999999999987789999999 68999999999999999873 33344443 222
Q ss_pred -c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 60 -V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 60 -~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
| .|.+.+..++..|.. +||++|++|+||+.+|..+|+|+++...
T Consensus 85 yc~~g~~~s~~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 130 (285)
T 1uar_A 85 YGDKNNWWAAYAFWFFKY----NGHKDVRLMNGGRQKWVEEGRPLTTEVP 130 (285)
T ss_dssp ECHHHHHHHHHHHHHHHH----TTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred ECCCCCccHHHHHHHHHH----cCCCCeEEecCCHHHHHHCCCcccCCCC
Confidence 3 333225555665655 9999999999999999999999987544
No 23
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.80 E-value=2.6e-20 Score=119.52 Aligned_cols=103 Identities=18% Similarity=0.330 Sum_probs=79.7
Q ss_pred CCcccCHHHHHhhhcC------CCeEEEecCCCCcccCCcccccccCCccchhHHH-H---HH-hhh--------c--cC
Q 033515 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKI-F---DL-IQE--------V--RG 62 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~------~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~-~---~~-~~~--------~--~g 62 (117)
.++.|+++++.++++. ++++|||||++.||..||||||+|||...+.... . .+ .+. | +|
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~ivvv~yC~~sg 100 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSS 100 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTSCCCCCTTSEEEEEEECSSSS
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhhhhccCCCCCeEEEEEcCCCC
Confidence 5788999999999875 3789999999999999999999999998765432 2 12 112 3 46
Q ss_pred hhhhHHHHHHHHHH------HHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 63 PTCAKRLANYLDEV------KEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 63 ~~~a~~~~~~l~~~------l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
.+ +..++..|... |..+||++|++|+||+.+|..++.|+..+..
T Consensus 101 ~r-s~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~~ 150 (161)
T 1c25_A 101 ER-GPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPPS 150 (161)
T ss_dssp SH-HHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESSC
T ss_pred cc-hHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCCC
Confidence 66 55666666541 3346999999999999999999998887643
No 24
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.80 E-value=7.5e-20 Score=118.86 Aligned_cols=102 Identities=16% Similarity=0.327 Sum_probs=78.5
Q ss_pred CCcccCHHHHHhhhcC------CCeEEEecCCCCcccCCcccccccCCccchhHH-HHH---Hh--hh--------c--c
Q 033515 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IFD---LI--QE--------V--R 61 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~------~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~-~~~---~~--~~--------~--~ 61 (117)
.++.|+++++.++++. ++++|||||++.||..||||||+|||...+... ... ++ +. | +
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~ivvv~yC~~~ 101 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHSEFS 101 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSSCCCC----CEEEEEEECSSS
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhhhhccccCCCCeEEEEECCCC
Confidence 5788999999999875 368999999999999999999999999876543 221 22 22 2 4
Q ss_pred ChhhhHHHHHHHHH------HHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 62 GPTCAKRLANYLDE------VKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 62 g~~~a~~~~~~l~~------~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
|.+ +..++..|.+ .|..+||++|++|+||+.+|..++.++..+.
T Consensus 102 g~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~ 151 (175)
T 2a2k_A 102 SER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 151 (175)
T ss_dssp SSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred CCc-cHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence 666 5566666654 2345799999999999999999998886653
No 25
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=1.4e-19 Score=125.06 Aligned_cols=99 Identities=20% Similarity=0.333 Sum_probs=78.1
Q ss_pred cccCHHHHHhhhcCCCeEEEecC----------CCCcccCCcccccccCCccchh-----------------HHHHHH--
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVR----------DDERSYDGHITGSLHYPSDSFT-----------------DKIFDL-- 56 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR----------~~~e~~~ghIpga~~ip~~~l~-----------------~~~~~~-- 56 (117)
..|+++++.+++++++++||||| ++.||..||||||+|||...+. ..+..+
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 57999999999987789999999 6678999999999999987542 223332
Q ss_pred hhh------c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 57 IQE------V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 57 ~~~------~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
.+. | .|.+.+..++..|.. +||++|++|+||+.+|..+|+|++++...
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 138 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAWWMLRT----FGVEKVSILGGGLAGWQRDDLLLEEGAVE 138 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHHHHHHH----TTCSCEEEETTHHHHHHHTTCCCBBSCCC
T ss_pred CCCCeEEEECCCCCccHHHHHHHHHH----cCCCCEEEecCCHHHHHHCCCcccCCCCC
Confidence 122 3 455535666777766 99999999999999999999999987553
No 26
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.80 E-value=8.5e-20 Score=125.95 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=77.3
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCC-CCcccCCcccccccCCccc---------------hhHHHHHH--hhh------c
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRD-DERSYDGHITGSLHYPSDS---------------FTDKIFDL--IQE------V 60 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~-~~e~~~ghIpga~~ip~~~---------------l~~~~~~~--~~~------~ 60 (117)
...|+++++.+++++++++|||||+ +.||..||||||+|||... |...+..+ .+. |
T Consensus 5 ~~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc 84 (277)
T 3aay_A 5 DVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYG 84 (277)
T ss_dssp HHEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEEC
T ss_pred CceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 3579999999998877899999998 8999999999999999864 33334442 222 3
Q ss_pred c-ChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 61 R-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 61 ~-g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
. |...+..++..|.. +||++|++|+||+.+|..+|+|+++...
T Consensus 85 ~~g~~~s~~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 85 GNNNWFAAYAYWYFKL----YGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp SGGGHHHHHHHHHHHH----TTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred CCCCchHHHHHHHHHH----cCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 3 33335566666666 9999999999999999999999987654
No 27
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.80 E-value=6.8e-20 Score=136.72 Aligned_cols=103 Identities=19% Similarity=0.297 Sum_probs=83.9
Q ss_pred CCC-CCcccCHHHHHhhhcC-CCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhh--h------c-cChhhhHHH
Q 033515 1 MAR-SISYISGSQLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQ--E------V-RGPTCAKRL 69 (117)
Q Consensus 1 ~~~-~~~~is~~e~~~~~~~-~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~--~------~-~g~~~a~~~ 69 (117)
|.. .++.|+++++.+++++ ++++|||||++.||..||||||+|||.+.+..++..+.. + | .|.+ +..+
T Consensus 1 m~~~~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~~~~~~~iVvyc~~g~~-s~~a 79 (539)
T 1yt8_A 1 MSLSQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRDTPITVYDDGEGL-APVA 79 (539)
T ss_dssp -----CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHSCCTTSCEEEECSSSSH-HHHH
T ss_pred CCCCcCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhCCCCCCeEEEEECCCCh-HHHH
Confidence 444 6789999999998873 479999999999999999999999999998887776632 2 4 4455 6677
Q ss_pred HHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 70 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 70 ~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
++.|.. +||++|++|+||+.+|..+|+|++++...
T Consensus 80 ~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~ 114 (539)
T 1yt8_A 80 AQRLHD----LGYSDVALLDGGLSGWRNAGGELFRDVNV 114 (539)
T ss_dssp HHHHHH----TTCSSEEEETTHHHHHHHTTCCCBCSSSH
T ss_pred HHHHHH----cCCCceEEeCCCHHHHHhcCCCcccCCcC
Confidence 777777 99999999999999999999999876543
No 28
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.79 E-value=3e-20 Score=120.42 Aligned_cols=99 Identities=19% Similarity=0.321 Sum_probs=73.8
Q ss_pred CCcccCHHHHHhhhcCC-------CeEEEecCCCCcccCCcccccccCCccchhHH---HHHHhh-------------h-
Q 033515 4 SISYISGSQLLSLKRRP-------NIAVIDVRDDERSYDGHITGSLHYPSDSFTDK---IFDLIQ-------------E- 59 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~-------~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~---~~~~~~-------------~- 59 (117)
.++.|+++++.++++.. +++|||||+ .||..||||||+|||...+... +.++.+ .
T Consensus 29 ~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~I 107 (169)
T 3f4a_A 29 NVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNV 107 (169)
T ss_dssp SEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCeE
Confidence 46789999999998742 489999999 8999999999999999877543 333321 2
Q ss_pred ---c-cC-hhhhHHHHHHHHHHHHhCC--CceEEEccccHHHHHhCCCCccc
Q 033515 60 ---V-RG-PTCAKRLANYLDEVKEDTG--INSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 60 ---~-~g-~~~a~~~~~~l~~~l~~~G--~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
| .| .+ +..++..|.+.|...| +.+|++|+||+.+|..++.+.+.
T Consensus 108 VvyC~sG~~R-s~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 108 IFHCMLSQQR-GPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp EEECSSSSSH-HHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred EEEeCCCCCc-HHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 4 34 45 5555555554344456 57999999999999998876554
No 29
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.79 E-value=1.5e-19 Score=134.81 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=86.3
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEV 76 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~ 76 (117)
.+..++++++.++++.++.+|||||++.||..||||||+|+|...|...+..+.+. .+|.+ |..++..|..
T Consensus 375 ~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l~~l~~~~~ivv~C~sG~r-s~~aa~~L~~- 452 (539)
T 1yt8_A 375 RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERLGTAERYVLTCGSSLL-ARFAVAEVQA- 452 (539)
T ss_dssp CCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGGGHHHHHHHHCCCSEEEEECSSSHH-HHHHHHHHHH-
T ss_pred cCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHHHhCCCCCeEEEEeCCChH-HHHHHHHHHH-
Confidence 45789999999999877899999999999999999999999999998877776554 45666 6667777777
Q ss_pred HHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 77 KEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
+||++|++|+||+.+|..+|+|++++...
T Consensus 453 ---~G~~~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 453 ---LSGKPVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp ---HHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred ---cCCCCEEEeCCcHHHHHhCCCCcccCCCC
Confidence 99999999999999999999999987543
No 30
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.79 E-value=1.6e-19 Score=120.69 Aligned_cols=102 Identities=16% Similarity=0.316 Sum_probs=78.9
Q ss_pred CCcccCHHHHHhhhcC------CCeEEEecCCCCcccCCcccccccCCccchhHH-HH---HHh--hh--------c--c
Q 033515 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IF---DLI--QE--------V--R 61 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~------~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~-~~---~~~--~~--------~--~ 61 (117)
.++.|+++++.++++. ++++|||||++.||..||||||+|||...+... .. .++ +. | +
T Consensus 42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~~~~l~~~~d~~ivvVvyC~~s 121 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHCEFS 121 (211)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTTTCCCSSTTSEEEEEEECSSS
T ss_pred CCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhhhhhccccCCCCeEEEEECCCC
Confidence 6788999999999875 378999999999999999999999999876542 32 222 12 3 4
Q ss_pred ChhhhHHHHHHHHH------HHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 62 GPTCAKRLANYLDE------VKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 62 g~~~a~~~~~~l~~------~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
|.+ +..++..|.. .|..+||++|++|+||+.+|..++.++..+.
T Consensus 122 G~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~~ 171 (211)
T 1qb0_A 122 SER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 171 (211)
T ss_dssp SSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred Ccc-HHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCCC
Confidence 666 5556666653 1334799999999999999999999887653
No 31
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.79 E-value=6.3e-20 Score=116.40 Aligned_cols=97 Identities=23% Similarity=0.306 Sum_probs=74.5
Q ss_pred CcccCHHHHHhhhc-CCCeEEEecCCCCcccC-Ccc------cccccCCccc--------hhHHHHH-H-----hhh---
Q 033515 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GHI------TGSLHYPSDS--------FTDKIFD-L-----IQE--- 59 (117)
Q Consensus 5 ~~~is~~e~~~~~~-~~~~~iiDvR~~~e~~~-ghI------pga~~ip~~~--------l~~~~~~-~-----~~~--- 59 (117)
+..|+++++.++++ +++++|||||++.||.. ||| |||+|||... +...+.. + .++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i 83 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERPV 83 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CCE
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCCEE
Confidence 45799999999887 36899999999999996 999 9999999876 1112211 1 222
Q ss_pred ----ccChhhhHHHHHHHHHHHHhCCCceEEEccccH------------HHHHhCCCCccccC
Q 033515 60 ----VRGPTCAKRLANYLDEVKEDTGINSIFVLERGF------------KGWEASGKPVCRCT 106 (117)
Q Consensus 60 ----~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~------------~~W~~~g~~~~~~~ 106 (117)
.+|.+ |..++..|.. +||++|++|+||+ .+|..+|+|++...
T Consensus 84 vvyC~~G~r-S~~aa~~L~~----~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 84 IFLCRSGNR-SIGAAEVATE----AGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp EEECSSSST-HHHHHHHHHH----TTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred EEEcCCChh-HHHHHHHHHH----cCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 45666 6677777777 9999999999999 68888899887654
No 32
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.79 E-value=4.1e-20 Score=117.68 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=71.6
Q ss_pred cccCHHHHHhhhc--CCCeEEEecCCCCcccCCcccccccCCccchh-HHHH-------HH-----------hhh-----
Q 033515 6 SYISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFT-DKIF-------DL-----------IQE----- 59 (117)
Q Consensus 6 ~~is~~e~~~~~~--~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~-~~~~-------~~-----------~~~----- 59 (117)
+.|+++++.++++ .++++|||||++.||..||||||+|||...+. .... .+ .+.
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 6799999999987 35789999999999999999999999998763 2221 22 122
Q ss_pred -c-cChhhhHH-----HHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 60 -V-RGPTCAKR-----LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 60 -~-~g~~~a~~-----~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
| .|.+++.. ++..|.. |+ .||++|++|+||+.+|...+.+++....
T Consensus 84 yc~~g~~s~~a~~~~~~~~~L~~-l~-~G~~~v~~L~GG~~~W~~~~~~~~~~~~ 136 (153)
T 2vsw_A 84 YDQSSQDVASLSSDCFLTVLLGK-LE-KSFNSVHLLAGGFAEFSRCFPGLCEGKS 136 (153)
T ss_dssp ECSSCCCGGGSCTTSHHHHHHHH-HH-HHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred EeCCCCcccccccchHHHHHHHH-HH-hCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence 3 45552222 1344443 11 3999999999999999988777766543
No 33
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.78 E-value=1.8e-19 Score=123.95 Aligned_cols=93 Identities=17% Similarity=0.315 Sum_probs=75.8
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHh------hh------c-cChhhhHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLI------QE------V-RGPTCAKRLA 70 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~------~~------~-~g~~~a~~~~ 70 (117)
..+.|+++++.+++++++++|||||++.||..||||||+|+|...+......+. +. | .|.+ +..++
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~R-S~~Aa 198 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIR-CEKTT 198 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSHH-HHHHH
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCChH-HHHHH
Confidence 467899999999998788999999999999999999999999998765332221 12 4 5666 66677
Q ss_pred HHHHHHHHhCCCceEEEccccHHHHHhCCCC
Q 033515 71 NYLDEVKEDTGINSIFVLERGFKGWEASGKP 101 (117)
Q Consensus 71 ~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~ 101 (117)
..|.. .||++|++|+||+.+|.++..+
T Consensus 199 ~~L~~----~Gf~nV~~L~GGi~aW~~~~~~ 225 (265)
T 4f67_A 199 AYMKE----LGFEHVYQLHDGILNYLESIPE 225 (265)
T ss_dssp HHHHH----HTCSSEEEETTHHHHHHHHSCT
T ss_pred HHHHH----cCCCCEEEecCHHHHHHHhcCc
Confidence 77777 9999999999999999876443
No 34
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.78 E-value=2.2e-19 Score=125.59 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=75.9
Q ss_pred CcccCHHHHHhhhcCC----CeEEEecC---------CCCcccCCcccccccCCccc-----------------hhHHHH
Q 033515 5 ISYISGSQLLSLKRRP----NIAVIDVR---------DDERSYDGHITGSLHYPSDS-----------------FTDKIF 54 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~----~~~iiDvR---------~~~e~~~ghIpga~~ip~~~-----------------l~~~~~ 54 (117)
.+.|+++++.++++++ +++||||| ++.||..||||||+|||.+. |...+.
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~ 100 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAG 100 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHH
Confidence 4679999999998754 89999999 67899999999999998764 333444
Q ss_pred HHh--hh------cc---ChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCC
Q 033515 55 DLI--QE------VR---GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 107 (117)
Q Consensus 55 ~~~--~~------~~---g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~ 107 (117)
.+. ++ |. |...|..+++.|+. +||++|++|+||+.+|..+|+|+++...
T Consensus 101 ~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 160 (302)
T 3olh_A 101 RLGVGAATHVVIYDASDQGLYSAPRVWWMFRA----FGHHAVSLLDGGLRHWLRQNLPLSSGKS 160 (302)
T ss_dssp HTTCCSSCEEEEECCCTTSCSSHHHHHHHHHH----TTCCCEEEETTHHHHHHHSCCC-CCSCC
T ss_pred HcCCCCCCEEEEEeCCCCCcchHHHHHHHHHH----cCCCcEEECCCCHHHHHHcCCCcccCCC
Confidence 431 22 42 33335566666666 9999999999999999999999988643
No 35
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.78 E-value=3.1e-19 Score=122.81 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=75.6
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCccc--------CCcccccccCCccchhHH-------------HH--HHhhh---
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERSY--------DGHITGSLHYPSDSFTDK-------------IF--DLIQE--- 59 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~~--------~ghIpga~~ip~~~l~~~-------------~~--~~~~~--- 59 (117)
..|+++++.+++++++++|||||++.||. .||||||+|||...+... +. .+.++
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 226 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEI 226 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEE
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence 46799999999887789999999999999 899999999999876432 22 12222
Q ss_pred ----ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhC-CCCccc
Q 033515 60 ----VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS-GKPVCR 104 (117)
Q Consensus 60 ----~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~-g~~~~~ 104 (117)
.+|.+ |..++..|.. +||++|++|+||+.+|... ++|+++
T Consensus 227 vvyC~~G~r-s~~a~~~L~~----~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 227 VTHCQTHHR-SGLTYLIAKA----LGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp EEECSSSSH-HHHHHHHHHH----TTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred EEECCchHH-HHHHHHHHHH----cCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 45666 6666777766 9999999999999999988 888763
No 36
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=4.4e-19 Score=110.83 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=77.9
Q ss_pred CcccCHHHHHhhhc-CCCeEEEecCCCCcccC-Ccc------cccccCCccchhH--HHHHH------hhh-------cc
Q 033515 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GHI------TGSLHYPSDSFTD--KIFDL------IQE-------VR 61 (117)
Q Consensus 5 ~~~is~~e~~~~~~-~~~~~iiDvR~~~e~~~-ghI------pga~~ip~~~l~~--~~~~~------~~~-------~~ 61 (117)
...|+++++.++++ +++++|||||++.||.. +|+ |||+|||+..+.. ....+ .++ .+
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~C~s 83 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKF 83 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEECSS
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEEeCC
Confidence 46799999999886 56899999999999975 444 7999999876531 22333 233 46
Q ss_pred ChhhhHHHHHHHHHHHHhCCCceEEEccccH---HHHHhCCCCccccCCCC
Q 033515 62 GPTCAKRLANYLDEVKEDTGINSIFVLERGF---KGWEASGKPVCRCTDVP 109 (117)
Q Consensus 62 g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~---~~W~~~g~~~~~~~~~~ 109 (117)
|.+ |..++..|.. +||++|+.|.||+ .+|..+|+|++.....+
T Consensus 84 G~R-S~~aa~~L~~----~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~~~ 129 (134)
T 1vee_A 84 DGN-SELVAELVAL----NGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTS 129 (134)
T ss_dssp STT-HHHHHHHHHH----HTCSEEEECTTTTTSTTSSGGGTCCEECCCCCC
T ss_pred CCc-HHHHHHHHHH----cCCcceEEecCCccCCcchhhcCCCCCCCCCCC
Confidence 777 6677777777 9999999999999 78999999998765543
No 37
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.77 E-value=1.5e-19 Score=121.20 Aligned_cols=101 Identities=18% Similarity=0.302 Sum_probs=74.7
Q ss_pred CCcccCHHHHHhhhcCC------CeEEEecCCCCcccCCcccccccCCccc-hhHHHH---HHh--hh---------c-c
Q 033515 4 SISYISGSQLLSLKRRP------NIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIF---DLI--QE---------V-R 61 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~------~~~iiDvR~~~e~~~ghIpga~~ip~~~-l~~~~~---~~~--~~---------~-~ 61 (117)
.++.|+++++.++++.+ +++|||||.+.||..||||||+|||... +...+. .++ .. . +
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~~~~~~~k~~~VVvyC~~S 134 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPIVPLDTQKRIIIVFHCEFS 134 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCCCCSSTTSEEEEEEECCC-
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccccccccCCCCEEEEEeCCC
Confidence 57889999999999854 6899999999999999999999999975 433331 111 11 3 5
Q ss_pred ChhhhHHHHHHHHHHH------HhCCCceEEEccccHHHHHhCCCCcccc
Q 033515 62 GPTCAKRLANYLDEVK------EDTGINSIFVLERGFKGWEASGKPVCRC 105 (117)
Q Consensus 62 g~~~a~~~~~~l~~~l------~~~G~~~v~~l~gG~~~W~~~g~~~~~~ 105 (117)
|.+ +..++..|.... ..+||++|++|+||+.+|..+...+..+
T Consensus 135 G~R-s~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lcep 183 (216)
T 3op3_A 135 SER-GPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCEP 183 (216)
T ss_dssp -CC-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ChH-HHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcccccC
Confidence 677 666677776511 1139999999999999999887666554
No 38
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.1e-19 Score=113.73 Aligned_cols=95 Identities=16% Similarity=0.237 Sum_probs=65.8
Q ss_pred ccCHHHHHh--------hhcCCCeEEEecCCCCcccCCcccccccCCccchhH--HH--HHH--h---------------
Q 033515 7 YISGSQLLS--------LKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD--KI--FDL--I--------------- 57 (117)
Q Consensus 7 ~is~~e~~~--------~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~--~~--~~~--~--------------- 57 (117)
.|+++|+.+ .+++++++|||||++.||..||||||+|||...+.. .. ..+ +
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 689999998 665567899999999999999999999999987532 11 111 0
Q ss_pred -hh------ccChhhh--------HHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 58 -QE------VRGPTCA--------KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 58 -~~------~~g~~~a--------~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
.. ..|.+++ ..++..|. ..|| +|++|+||+.+|..+|.+++.+.
T Consensus 82 ~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~----~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 82 FSKEIIVYDENTNEPSRVMPSQPLHIVLESLK----REGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHH----HTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred CCCcEEEEECCCCchhhcCcccHHHHHHHHHH----HcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 11 2344422 23344444 4999 99999999999999999887653
No 39
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.77 E-value=1.9e-19 Score=132.29 Aligned_cols=95 Identities=20% Similarity=0.388 Sum_probs=81.2
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHHH
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEVK 77 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~l 77 (117)
.+.++++++.+++++++.+|||||++.||..||||||+|+|...+......+++. .+|.+ |..++..|..
T Consensus 373 ~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~vvv~C~~G~r-a~~a~~~L~~-- 449 (474)
T 3tp9_A 373 YANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDVPRDGSVCVYCRTGGR-SAIAASLLRA-- 449 (474)
T ss_dssp CEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTGGGSCSSSCEEEECSSSHH-HHHHHHHHHH--
T ss_pred ccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHhcCCCCCEEEEECCCCHH-HHHHHHHHHH--
Confidence 4678999999998877899999999999999999999999999888766666544 35666 6666777766
Q ss_pred HhCCCceEEEccccHHHHHhCCCCccc
Q 033515 78 EDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 78 ~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
+||++|++|+||+.+|..+|+|+++
T Consensus 450 --~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 450 --HGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp --HTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred --cCCCCEEEecChHHHHHhCCCCCCC
Confidence 9999999999999999999999864
No 40
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.77 E-value=2e-19 Score=104.11 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=58.9
Q ss_pred CeEEEecCCCCcccCCcccccccCCccchhHHHHHH--hhh-------ccChhhhHHHHHHHHHHHHhCCCceEEEcccc
Q 033515 21 NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDL--IQE-------VRGPTCAKRLANYLDEVKEDTGINSIFVLERG 91 (117)
Q Consensus 21 ~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~--~~~-------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG 91 (117)
+++|||||++.||..||||||+|||...+...+.++ .+. ..|.+ |..++..|.+ .||++|+++ ||
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~~~ivv~C~~g~r-s~~aa~~L~~----~G~~~v~~l-GG 74 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAGRQ-SGQAKEILSE----MGYTHVENA-GG 74 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHHCCCTTSEEEEEESSSHH-HHHHHHHHHH----TTCSSEEEE-EE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHhCCCCCCcEEEEcCCCch-HHHHHHHHHH----cCCCCEEec-cC
Confidence 468999999999999999999999999988877777 333 35666 6677777777 999999999 99
Q ss_pred HHHHH
Q 033515 92 FKGWE 96 (117)
Q Consensus 92 ~~~W~ 96 (117)
+.+|.
T Consensus 75 ~~~w~ 79 (85)
T 2jtq_A 75 LKDIA 79 (85)
T ss_dssp TTTCC
T ss_pred HHHHh
Confidence 99994
No 41
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.76 E-value=6.8e-19 Score=122.64 Aligned_cols=100 Identities=23% Similarity=0.371 Sum_probs=77.2
Q ss_pred CcccCHHHHHhhhcC----CCeEEEecC--------CCCcccCCcccccccCCccchhHH-----------------HHH
Q 033515 5 ISYISGSQLLSLKRR----PNIAVIDVR--------DDERSYDGHITGSLHYPSDSFTDK-----------------IFD 55 (117)
Q Consensus 5 ~~~is~~e~~~~~~~----~~~~iiDvR--------~~~e~~~ghIpga~~ip~~~l~~~-----------------~~~ 55 (117)
-+.|+++++.++++. ++++||||| ++.||..||||||+|||...+... +..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 358999999999875 589999999 578999999999999998865421 111
Q ss_pred H--hhh------c-c--ChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 56 L--IQE------V-R--GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 56 ~--~~~------~-~--g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
+ .++ | . |.+.+..+++.|.. +||++|++|+||+.+|..+|+|+++....
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~ 146 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRV----FGHRTVSVLNGGFRNWLKEGHPVTSEPSR 146 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHH----TTCCCEEEETTHHHHHHHTTCCCBCSCCC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHH----cCCCcEEEcCCCHHHHHHcCCccccCCCC
Confidence 1 122 3 3 45445566776666 99999999999999999999999876543
No 42
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=1.6e-18 Score=119.78 Aligned_cols=94 Identities=20% Similarity=0.326 Sum_probs=67.3
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcc-----------cCCcccccccCCccchhH--------HHHH------Hhhh-
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTD--------KIFD------LIQE- 59 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpga~~ip~~~l~~--------~~~~------~~~~- 59 (117)
..|+++++.++++.++++|||||++.|| ..||||||+|||...+.. .+.. +.++
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDK 231 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSS
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCC
Confidence 4589999999887667899999999999 689999999999987654 2321 1122
Q ss_pred -----c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCccc
Q 033515 60 -----V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCR 104 (117)
Q Consensus 60 -----~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~ 104 (117)
| +|.+ |..++..|.. +||++|++|+||+.+|.. .++|+++
T Consensus 232 ~ivv~C~~G~r-s~~a~~~L~~----~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 232 PIIVSCGSGVT-AAVVLLALAT----LDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp CEEEECCSSST-HHHHHHHHHH----TTCSSCEEECCSCCC-----------
T ss_pred CEEEECChHHH-HHHHHHHHHH----cCCCCceeeCChHHHHhcCCCCCcee
Confidence 4 5777 6667777776 999999999999999987 4888875
No 43
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.73 E-value=3.5e-18 Score=119.07 Aligned_cols=96 Identities=19% Similarity=0.208 Sum_probs=76.6
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcc------------cCCcccccccCCccchhH---------HH----HH--Hhh
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERS------------YDGHITGSLHYPSDSFTD---------KI----FD--LIQ 58 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~------------~~ghIpga~~ip~~~l~~---------~~----~~--~~~ 58 (117)
..|+++++.++++.++++|||||++.|| ..||||||+|||...+.. .+ .. +.+
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 239 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDL 239 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCT
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCC
Confidence 5789999999887667899999999999 889999999999987642 11 11 122
Q ss_pred h-------ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCccccC
Q 033515 59 E-------VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCT 106 (117)
Q Consensus 59 ~-------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~~~ 106 (117)
+ .+|.+ |..++..|.. +||++|++|+||+.+|.. .++|++++.
T Consensus 240 ~~~ivv~C~sG~r-s~~a~~~L~~----~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 240 TKPLIATCRKGVT-ACHIALAAYL----CGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp TSCEEEECSSSST-HHHHHHHHHH----TTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred CCCEEEECCcHHH-HHHHHHHHHH----cCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 2 45777 6666776766 999999999999999988 799998765
No 44
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.73 E-value=4.5e-19 Score=112.82 Aligned_cols=94 Identities=18% Similarity=0.179 Sum_probs=66.6
Q ss_pred CCcccCHHHHHhhhcCC--CeEEEecCCCCcccCCcccccccCCccchh---------------------HHHHHHhhh-
Q 033515 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFT---------------------DKIFDLIQE- 59 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~--~~~iiDvR~~~e~~~ghIpga~~ip~~~l~---------------------~~~~~~~~~- 59 (117)
.+..|+++++.++++.+ +++|||||++.||..||||||+|||...+. ..+..+.+.
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTD 93 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSS
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCC
Confidence 56789999999988754 789999999999999999999999987542 111111222
Q ss_pred ------ccChhh------hHHHHHHHHHHHHhCCCceEEEccccHHHHHhCC
Q 033515 60 ------VRGPTC------AKRLANYLDEVKEDTGINSIFVLERGFKGWEASG 99 (117)
Q Consensus 60 ------~~g~~~------a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g 99 (117)
..|.+. +..++..|.. |...||+ |++|+||+.+|....
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~-l~~~G~~-v~~L~GG~~~W~~~~ 143 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKK-LKDEGCR-AFYLEGGFSKFQAEF 143 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHH-HHHTTCC-CEECCCCHHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHH-HHHCCCc-eEEEcChHHHHHHHC
Confidence 334442 2333444443 3335998 999999999998763
No 45
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.73 E-value=5.3e-18 Score=123.28 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=77.3
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcc-----------cCCcccccccCCcc--------------------chhHHHH
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSD--------------------SFTDKIF 54 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpga~~ip~~--------------------~l~~~~~ 54 (117)
..|+++++.++++.++.+|||||++.|| ..||||||+|||.. .|...+.
T Consensus 272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 351 (423)
T 2wlr_A 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWK 351 (423)
T ss_dssp GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHH
T ss_pred heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHH
Confidence 3589999999887778999999999999 89999999999975 2222221
Q ss_pred --HHhhh-------ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCccccCCCCCc
Q 033515 55 --DLIQE-------VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCTDVPCK 111 (117)
Q Consensus 55 --~~~~~-------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~~~~~~~~ 111 (117)
.+.+. .+|.+ |..++..|.. +||++|++|+||+.+|.. .++|++++...+++
T Consensus 352 ~~~~~~~~~ivvyC~sG~r-s~~aa~~L~~----~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~~~~ 413 (423)
T 2wlr_A 352 AWNIKPEQQVSFYCGTGWR-ASETFMYARA----MGWKNVSVYDGGWYEWSSDPKNPVATGERGPDS 413 (423)
T ss_dssp TTTCCTTSEEEEECSSSHH-HHHHHHHHHH----TTCSSEEEESSHHHHHTTSTTSCEECSSCCC--
T ss_pred HcCCCCCCcEEEECCcHHH-HHHHHHHHHH----cCCCCcceeCccHHHHhcCCCCCcccCCCCCCh
Confidence 12222 45777 5566666666 999999999999999998 89999987665543
No 46
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=1.1e-17 Score=115.73 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=72.2
Q ss_pred cccCHHHHHhhhc---CCCeEEEecCCCCccc----------------CCcccccccCCccchh-------------HHH
Q 033515 6 SYISGSQLLSLKR---RPNIAVIDVRDDERSY----------------DGHITGSLHYPSDSFT-------------DKI 53 (117)
Q Consensus 6 ~~is~~e~~~~~~---~~~~~iiDvR~~~e~~----------------~ghIpga~~ip~~~l~-------------~~~ 53 (117)
..|+++++.++++ ..+..|||||++.||. .||||||+|||...+. ..+
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~ 225 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALY 225 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHH
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHH
Confidence 3589999999883 1345799999999996 7999999999987764 222
Q ss_pred HH--Hhhh------c-cChhhhHHHHHHHH-HHHHhCCCceEEEccccHHHHH-hCCCCcccc
Q 033515 54 FD--LIQE------V-RGPTCAKRLANYLD-EVKEDTGINSIFVLERGFKGWE-ASGKPVCRC 105 (117)
Q Consensus 54 ~~--~~~~------~-~g~~~a~~~~~~l~-~~l~~~G~~~v~~l~gG~~~W~-~~g~~~~~~ 105 (117)
.. +.+. | +|.+ |..++..|. . +||++|++|+||+.+|. ..|+|++++
T Consensus 226 ~~~g~~~~~~ivvyC~~G~r-s~~a~~~L~~~----~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 226 EPLGITKDKDIVVYCRIAER-SSHSWFVLKYL----LGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp GGGTCCTTSEEEEECSSHHH-HHHHHHHHHTT----SCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHcCCCCCCCEEEECCchHH-HHHHHHHHHHH----cCCCCcceeCchHHHHhcCCCCCcccC
Confidence 22 2222 4 4555 555666665 5 99999999999999998 789999875
No 47
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.71 E-value=8.4e-18 Score=120.68 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=74.9
Q ss_pred CcccCHHHHHhhhcCCCeEEEecCC--------CCcccCCcccccccCCccc-hhHH-------------------HHHH
Q 033515 5 ISYISGSQLLSLKRRPNIAVIDVRD--------DERSYDGHITGSLHYPSDS-FTDK-------------------IFDL 56 (117)
Q Consensus 5 ~~~is~~e~~~~~~~~~~~iiDvR~--------~~e~~~ghIpga~~ip~~~-l~~~-------------------~~~~ 56 (117)
...|+++++.+++++ ++|||||+ +.||..||||||+|||... +... +..+
T Consensus 13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~ 90 (373)
T 1okg_A 13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMAN 90 (373)
T ss_dssp CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHT
T ss_pred CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHc
Confidence 468999999998874 89999998 6899999999999999875 5321 1111
Q ss_pred --hhh------c--cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccCCC
Q 033515 57 --IQE------V--RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 108 (117)
Q Consensus 57 --~~~------~--~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~~~ 108 (117)
.++ | .|.+++..+++.|+. +|| +|++|+||+.+|..+|+|+++....
T Consensus 91 gi~~d~~VVvYc~~~G~rsa~ra~~~L~~----~G~-~V~~L~GG~~aW~~~g~pv~~~~~~ 147 (373)
T 1okg_A 91 GMAGELPVLCYDDECGAMGGCRLWWMLNS----LGA-DAYVINGGFQACKAAGLEMESGEPS 147 (373)
T ss_dssp TCSSSSCEEEECSSTTTTTHHHHHHHHHH----HTC-CEEEETTTTHHHHTTTCCEECSCCC
T ss_pred CCCCCCeEEEEeCCCCchHHHHHHHHHHH----cCC-eEEEeCCCHHHHHhhcCCcccCCCC
Confidence 111 4 355644466776666 999 9999999999999999999876443
No 48
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.71 E-value=1.5e-18 Score=121.44 Aligned_cols=92 Identities=20% Similarity=0.229 Sum_probs=71.4
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcc-----------cCCcccccccCCccchhHH---------HH------HHhhh
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTDK---------IF------DLIQE 59 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpga~~ip~~~l~~~---------~~------~~~~~ 59 (117)
..++.+++.++++.++++|||||++.|| ..||||||+|||...+... +. .+.+.
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS 254 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTT
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCC
Confidence 4688999999887678899999999999 8899999999999876421 11 11112
Q ss_pred -------ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCc
Q 033515 60 -------VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPV 102 (117)
Q Consensus 60 -------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~ 102 (117)
.+|.+ |..++..|.. +||++|++|+|||.+|..++.|.
T Consensus 255 ~~iv~yC~sG~r-s~~a~~~L~~----~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 255 KPLVATCGSGVT-ACHVALGAYL----CGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp SCEEEECSSSST-THHHHHHHHT----TTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCEEEECCChHH-HHHHHHHHHH----cCCCCeeEeCCcHHHHhhccCCC
Confidence 45777 5555665655 99999999999999999988764
No 49
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.70 E-value=1.7e-17 Score=114.42 Aligned_cols=92 Identities=20% Similarity=0.240 Sum_probs=67.6
Q ss_pred cCHHHHHhhhcCCCeEEEecCCCCcccC----------------CcccccccCCccch-------------hHHHHHH--
Q 033515 8 ISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSF-------------TDKIFDL-- 56 (117)
Q Consensus 8 is~~e~~~~~~~~~~~iiDvR~~~e~~~----------------ghIpga~~ip~~~l-------------~~~~~~~-- 56 (117)
++++++.+++..++ |||||++.||.. ||||||+|||...+ ...+...
T Consensus 146 ~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~ 223 (277)
T 3aay_A 146 AFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGL 223 (277)
T ss_dssp ECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTC
T ss_pred cCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 77999999887544 999999999975 99999999998743 2222221
Q ss_pred hhh------c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCcccc
Q 033515 57 IQE------V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 105 (117)
Q Consensus 57 ~~~------~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~~ 105 (117)
.++ | +|.+ |..++..|.. .+||++|++|+||+.+|.. .|+|++++
T Consensus 224 ~~~~~iv~yC~~G~r-s~~a~~~L~~---~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 224 DNSKETIAYCRIGER-SSHTWFVLRE---LLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp CTTSCEEEECSSHHH-HHHHHHHHHT---TSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCEEEEcCcHHH-HHHHHHHHHH---HcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 222 4 4555 4444444431 2899999999999999998 89998764
No 50
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.70 E-value=2e-17 Score=111.43 Aligned_cols=88 Identities=19% Similarity=0.221 Sum_probs=69.1
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcccC----------CcccccccCCccchhHH---HH--HHhhh-------ccCh
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERSYD----------GHITGSLHYPSDSFTDK---IF--DLIQE-------VRGP 63 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~~~----------ghIpga~~ip~~~l~~~---~~--~~~~~-------~~g~ 63 (117)
..++++++.+ +.+|||||++.||.. ||||||+|||...+... .. .+.+. .+|.
T Consensus 121 ~~i~~~e~~~-----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~e~~~~~~~~~~~~iv~~C~~G~ 195 (230)
T 2eg4_A 121 WLLTADEAAR-----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLERLGLQPGQEVGVYCHSGA 195 (230)
T ss_dssp GBCCHHHHHT-----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCTTHHHHHTCCTTCEEEEECSSSH
T ss_pred ceeCHHHHhh-----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChHHHHHhcCCCCCCCEEEEcCChH
Confidence 3577777766 578999999999998 99999999999887543 22 22222 3566
Q ss_pred hhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccc
Q 033515 64 TCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 64 ~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
+ |..++..|.. +| .+|++|+||+.+|...|+|+++
T Consensus 196 r-s~~a~~~L~~----~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 196 R-SAVAFFVLRS----LG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp H-HHHHHHHHHH----TT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred H-HHHHHHHHHH----cC-CCcEEecCcHHHHhhcCCCCCC
Confidence 6 6666777766 99 8999999999999999999863
No 51
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.69 E-value=1.8e-17 Score=116.74 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=71.5
Q ss_pred cccCHHHHHhhhcCCCeEEEecCCCCcccC----------------CcccccccCCccchh-------------HHHHHH
Q 033515 6 SYISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSFT-------------DKIFDL 56 (117)
Q Consensus 6 ~~is~~e~~~~~~~~~~~iiDvR~~~e~~~----------------ghIpga~~ip~~~l~-------------~~~~~~ 56 (117)
..++++|+.+++++. +|||||++.||.. ||||||+|||...+. ..+..+
T Consensus 179 ~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l 256 (318)
T 3hzu_A 179 IRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFI 256 (318)
T ss_dssp TBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTC
T ss_pred ccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCC
Confidence 357899999988753 8999999999987 999999999997542 112122
Q ss_pred hhh------c-cChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCccccCC
Q 033515 57 IQE------V-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCTD 107 (117)
Q Consensus 57 ~~~------~-~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~~~~ 107 (117)
.++ | +|.+ |..++..|.+ .+||++|++|+|||.+|.. .++|++++..
T Consensus 257 ~~~~~ivvyC~sG~r-s~~a~~~L~~---~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~ 311 (318)
T 3hzu_A 257 NPDDQTVVYCRIGER-SSHTWFVLTH---LLGKADVRNYDGSWTEWGNAVRVPIVAGEE 311 (318)
T ss_dssp CTTCCCEEECSSSHH-HHHHHHHHHH---TSCCSSCEECTTHHHHHTTSTTCCCBCSSS
T ss_pred CCCCcEEEEcCChHH-HHHHHHHHHH---HcCCCCeeEeCCcHHHHhcCCCCCcccCCC
Confidence 222 4 5666 5445554432 2899999999999999995 6999998753
No 52
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.68 E-value=2.9e-17 Score=105.13 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=66.8
Q ss_pred CCcccCHHHHHhhhcCC--CeEEEecCCCCcccCCcccccccCCccchhH-----HHH-HHh-----------h-h----
Q 033515 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIF-DLI-----------Q-E---- 59 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~--~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~-----~~~-~~~-----------~-~---- 59 (117)
....|+++++.++++.+ +++|||||++.||..||||||+|||...+.. .+. .++ . .
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEEE
Confidence 56789999999998755 8999999999999999999999999875531 111 111 1 1
Q ss_pred -cc-Chh---hhHHHHHHHHHHHHhC----CCc-eEEEccccHHHHHhCCCCcc
Q 033515 60 -VR-GPT---CAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVC 103 (117)
Q Consensus 60 -~~-g~~---~a~~~~~~l~~~l~~~----G~~-~v~~l~gG~~~W~~~g~~~~ 103 (117)
+. +.. .+..++..|.+.|... ||. +|++|+||+.+|... +|..
T Consensus 98 y~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~ 150 (157)
T 2gwf_A 98 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQY 150 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGG
T ss_pred EcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhh
Confidence 22 211 1223345555444443 454 399999999999885 5544
No 53
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.68 E-value=3.1e-17 Score=104.91 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=68.1
Q ss_pred CCcccCHHHHHhhhcCC--CeEEEecCCCCcccCCcccccccCCccchhH-----HHHH-Hh-----------h-h----
Q 033515 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIFD-LI-----------Q-E---- 59 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~--~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~-----~~~~-~~-----------~-~---- 59 (117)
....|+++++.++++.. +++|||||++.||..||||||+|||...+.. .+.. ++ . .
T Consensus 13 ~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VVv 92 (157)
T 1whb_A 13 EKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 92 (157)
T ss_dssp CCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEEE
T ss_pred cCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEEE
Confidence 46789999999999865 7999999999999999999999999865531 1110 11 1 1
Q ss_pred -cc-Chh---hhHHHHHHHHHHHHhC----CCc-eEEEccccHHHHHhCCCCcccc
Q 033515 60 -VR-GPT---CAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVCRC 105 (117)
Q Consensus 60 -~~-g~~---~a~~~~~~l~~~l~~~----G~~-~v~~l~gG~~~W~~~g~~~~~~ 105 (117)
+. +.. .+..++..|.+.|... ||. +|++|+||+.+|... +|....
T Consensus 93 y~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 147 (157)
T 1whb_A 93 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 147 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBS
T ss_pred ECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhC
Confidence 22 211 1223344444333333 454 499999999999885 666544
No 54
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.67 E-value=2.4e-17 Score=122.91 Aligned_cols=88 Identities=19% Similarity=0.319 Sum_probs=74.2
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh------c-cChhhhHHHHHHHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE------V-RGPTCAKRLANYLDEV 76 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~------~-~g~~~a~~~~~~l~~~ 76 (117)
.++.|+++++.++ .++.+|||||++.||..+|||||+|||.+.+...+..++++ | +|.+ |..++..|.+
T Consensus 471 ~~~~i~~~~~~~~--~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~~~~~~~iv~~c~~g~r-s~~a~~~l~~- 546 (565)
T 3ntd_A 471 DATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELPKDKEIIIFSQVGLR-GNVAYRQLVN- 546 (565)
T ss_dssp SCCEECTTTTTSC--CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGGSCTTSEEEEECSSSHH-HHHHHHHHHH-
T ss_pred ccceeeHHHHHhC--CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhhcCCcCeEEEEeCCchH-HHHHHHHHHH-
Confidence 3567888888877 46899999999999999999999999999988777777655 4 5666 7777887777
Q ss_pred HHhCCCceEEEccccHHHHHhCC
Q 033515 77 KEDTGINSIFVLERGFKGWEASG 99 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g 99 (117)
.|| +|++|+||+.+|..+|
T Consensus 547 ---~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 547 ---NGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp ---TTC-CEEEETTHHHHHHHTC
T ss_pred ---cCC-CEEEEcChHHHHHhCc
Confidence 999 9999999999998765
No 55
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.67 E-value=1e-16 Score=116.53 Aligned_cols=96 Identities=21% Similarity=0.300 Sum_probs=74.7
Q ss_pred cccCHHHHHhhhc--------CCCeEEEecC--CCCcccCCcccccccCCccchhH--------------HHHHH--hhh
Q 033515 6 SYISGSQLLSLKR--------RPNIAVIDVR--DDERSYDGHITGSLHYPSDSFTD--------------KIFDL--IQE 59 (117)
Q Consensus 6 ~~is~~e~~~~~~--------~~~~~iiDvR--~~~e~~~ghIpga~~ip~~~l~~--------------~~~~~--~~~ 59 (117)
..++++++.++++ .++++||||| ++.||..||||||+|||...+.. .+... .+.
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 5688999998876 2478999999 99999999999999999987643 22211 122
Q ss_pred ------cc-ChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 60 ------VR-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 60 ------~~-g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
|. |.+ |..++..|.. +||++|++|+||+.+|...++|++++.
T Consensus 204 ~~ivvyC~~G~~-a~~~~~~L~~----~G~~~v~~l~Gg~~~W~~~g~pv~~g~ 252 (423)
T 2wlr_A 204 TTVILYGRDVYA-AARVAQIMLY----AGVKDVRLLDGGWQTWSDAGLPVERGT 252 (423)
T ss_dssp SEEEEECSSHHH-HHHHHHHHHH----HTCSCEEEETTTHHHHHHTTCCCBCSS
T ss_pred CeEEEECCCchH-HHHHHHHHHH----cCCCCeEEECCCHHHHhhCCCCcccCC
Confidence 43 444 5566666666 999999999999999999999998753
No 56
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.67 E-value=2.7e-17 Score=105.27 Aligned_cols=95 Identities=18% Similarity=0.241 Sum_probs=66.0
Q ss_pred CCcccCHHHHHhhhc--------CCCeEEEecCCCCcccCCcccccccCCccchh--HHHH--HHh--------------
Q 033515 4 SISYISGSQLLSLKR--------RPNIAVIDVRDDERSYDGHITGSLHYPSDSFT--DKIF--DLI-------------- 57 (117)
Q Consensus 4 ~~~~is~~e~~~~~~--------~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~--~~~~--~~~-------------- 57 (117)
.+..|+++++.++++ +++++|||||++.||..||||||+|||...+. ..+. .+.
T Consensus 9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 88 (158)
T ss_dssp --CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSS
T ss_pred CCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHH
Confidence 578899999999997 34689999999999999999999999998863 1111 110
Q ss_pred ---hh-------ccChh--------hhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCcc
Q 033515 58 ---QE-------VRGPT--------CAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVC 103 (117)
Q Consensus 58 ---~~-------~~g~~--------~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~ 103 (117)
.. ..|.+ .+..++..|.. .|| +|++|.||+.+|........
T Consensus 89 ~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~----~G~-~v~~L~GG~~~W~~~~p~~~ 147 (158)
T 3tg1_B 89 KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKR----EGK-EPLVLKGGLSSFKQNHENLC 147 (158)
T ss_dssp TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHT----TTC-CEEEETTHHHHHTSSCGGGB
T ss_pred hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHh----CCC-cEEEeCCcHHHHHHHhhhhc
Confidence 01 22311 14445555554 999 69999999999987755443
No 57
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.65 E-value=3.5e-17 Score=122.75 Aligned_cols=89 Identities=21% Similarity=0.291 Sum_probs=75.1
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh------c-cChhhhHHHHHHHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE------V-RGPTCAKRLANYLDEV 76 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~------~-~g~~~a~~~~~~l~~~ 76 (117)
.++.|+++|+.++++ ++.+|||||++.||..||||||+|||.+.+...+..++++ | +|.+ |..++..|.+
T Consensus 487 ~~~~i~~~~~~~~~~-~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~~~l~~~~~iv~~C~~g~r-s~~a~~~l~~- 563 (588)
T 3ics_A 487 FVDTVQWHEIDRIVE-NGGYLIDVREPNELKQGMIKGSINIPLDELRDRLEEVPVDKDIYITCQLGMR-GYVAARMLME- 563 (588)
T ss_dssp SCCEECTTTHHHHHH-TTCEEEECSCGGGGGGCBCTTEEECCHHHHTTCGGGSCSSSCEEEECSSSHH-HHHHHHHHHH-
T ss_pred ccceecHHHHHHHhc-CCCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHHhhCCCCCeEEEECCCCcH-HHHHHHHHHH-
Confidence 467899999999886 5689999999999999999999999998887766666554 4 5666 6677777777
Q ss_pred HHhCCCceEEEccccHHHHHhCC
Q 033515 77 KEDTGINSIFVLERGFKGWEASG 99 (117)
Q Consensus 77 l~~~G~~~v~~l~gG~~~W~~~g 99 (117)
.||+ |++|+||+.+|....
T Consensus 564 ---~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 564 ---KGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp ---TTCC-EEEETTHHHHHHHHC
T ss_pred ---cCCc-EEEEcchHHHHHhhh
Confidence 9998 999999999998753
No 58
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.1e-15 Score=108.04 Aligned_cols=97 Identities=18% Similarity=0.172 Sum_probs=69.0
Q ss_pred CcccCHHHHHhhhcC---CCeEEEecCC--------C-Ccc-cCCcccccccCCccchhHHHH----------HHhhh--
Q 033515 5 ISYISGSQLLSLKRR---PNIAVIDVRD--------D-ERS-YDGHITGSLHYPSDSFTDKIF----------DLIQE-- 59 (117)
Q Consensus 5 ~~~is~~e~~~~~~~---~~~~iiDvR~--------~-~e~-~~ghIpga~~ip~~~l~~~~~----------~~~~~-- 59 (117)
.+.|||++|.+++.. ..+++||++- . .|| .++|||||++++.+.+..... .|...
T Consensus 27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~ 106 (327)
T 3utn_X 27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS 106 (327)
T ss_dssp CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 357999999999862 3589999963 2 356 789999999998876532111 11111
Q ss_pred --------------ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 60 --------------VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 60 --------------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
..+...|..+++.|+. +|+++|++|+|| .+|.++|+|++++.
T Consensus 107 ~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~----~Gh~~V~vLdGg-~aW~~~g~p~~~~~ 162 (327)
T 3utn_X 107 NLGVQKDDILVVYDRVGNFSSPRCAWTLGV----MGHPKVYLLNNF-NQYREFKYPLDSSK 162 (327)
T ss_dssp HTTCCTTCEEEEECSSSSSSHHHHHHHHHH----TTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred HcCCCCCCEEEEEeCCCCcHHHHHHHHHHH----cCCCceeecccH-HHHHHhCCCcccCC
Confidence 3333335566666665 999999999976 89999999998764
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.59 E-value=9.6e-17 Score=117.97 Aligned_cols=80 Identities=18% Similarity=0.326 Sum_probs=0.0
Q ss_pred HHhhhcCCCeEEEecCCCCcccCCcccccccCCccchhHHHHHHhhh-------ccChhhhHHHHHHHHHHHHhCCCceE
Q 033515 13 LLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE-------VRGPTCAKRLANYLDEVKEDTGINSI 85 (117)
Q Consensus 13 ~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~l~~~G~~~v 85 (117)
+.+++++++++|||||++.||..||||||+|||...+...+..++++ .+|.+ |..++..|.. +||++|
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~~~~iv~~C~~G~r-s~~a~~~L~~----~G~~~v 453 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNKNDVIYVHCQSGIR-SSIAIGILEH----KGYHNI 453 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHHhhCCCCCeEEEECCCChH-HHHHHHHHHH----cCCCCE
Confidence 44555556789999999999999999999999999988777766654 35666 5566776666 999999
Q ss_pred EEccccHHHHHh
Q 033515 86 FVLERGFKGWEA 97 (117)
Q Consensus 86 ~~l~gG~~~W~~ 97 (117)
++|+||+.+|.+
T Consensus 454 ~~l~GG~~~W~~ 465 (466)
T 3r2u_A 454 INVNEGYKDIQL 465 (466)
T ss_dssp ------------
T ss_pred EEecChHHHHhh
Confidence 999999999964
No 60
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=1.1e-15 Score=112.40 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=75.2
Q ss_pred CCcccCHHHHHhhhcCCCeEEEecCCCCcccCCcccccccCCccc-hhHHHHHHhhh-------ccChhhhHHHHHHHHH
Q 033515 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQE-------VRGPTCAKRLANYLDE 75 (117)
Q Consensus 4 ~~~~is~~e~~~~~~~~~~~iiDvR~~~e~~~ghIpga~~ip~~~-l~~~~~~~~~~-------~~g~~~a~~~~~~l~~ 75 (117)
.++.|++++|++++++ + +|||||++.+|..||||||+|+|.+. +..+...+... +.+.. +..+++.|+.
T Consensus 271 ~~~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l~~~~~~vvvy~~~~~-~~~~~~~L~~ 347 (474)
T 3tp9_A 271 ERVDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIHLLAADAI-APDVIRALRS 347 (474)
T ss_dssp EECCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHHCCSSSCEEEECCTTT-HHHHHHHHHH
T ss_pred CCceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhcCCCCCeEEEEECCCc-HHHHHHHHHH
Confidence 5678999999999875 5 99999999999999999999999974 66666665422 33333 3446666666
Q ss_pred HHHhCCCceEEEccccHHHHHhCCCCcccc
Q 033515 76 VKEDTGINSIFVLERGFKGWEASGKPVCRC 105 (117)
Q Consensus 76 ~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~ 105 (117)
+||++|+++.+|+.+|..++.++...
T Consensus 348 ----~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 348 ----IGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp ----TTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred ----cCCcceEEecCcHHHHHhcccccccc
Confidence 99999998666999999988877654
No 61
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.52 E-value=3.6e-15 Score=107.04 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=62.2
Q ss_pred CCCeEEEecCCCCccc-----------CCcccccccCCccchh----------------HHHHHH----hh---h-----
Q 033515 19 RPNIAVIDVRDDERSY-----------DGHITGSLHYPSDSFT----------------DKIFDL----IQ---E----- 59 (117)
Q Consensus 19 ~~~~~iiDvR~~~e~~-----------~ghIpga~~ip~~~l~----------------~~~~~~----~~---~----- 59 (117)
.++.+|||||++.||. .||||||+|||+..+. ..+..+ .+ +
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 3567899999999999 9999999999997753 112222 33 3
Q ss_pred --ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHh-CCCCcccc
Q 033515 60 --VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 105 (117)
Q Consensus 60 --~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~-~g~~~~~~ 105 (117)
.+|.+ |..++..|.. +||++|++|+|||.+|.. .++|++++
T Consensus 252 yC~sG~r-s~~a~~~L~~----~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 252 SCGSGVT-ACINIALVHH----LGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp ECSSSST-HHHHHHHHHH----TTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred ECCchHH-HHHHHHHHHH----cCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 45777 6566666666 999999999999999987 67776543
No 62
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.49 E-value=1.6e-14 Score=97.22 Aligned_cols=78 Identities=18% Similarity=0.171 Sum_probs=54.6
Q ss_pred CCCeEEEecCCCCcccCCcccccccCCcc--ch---------------hHHHHHHhhh------c-cChhhhHHHHHHHH
Q 033515 19 RPNIAVIDVRDDERSYDGHITGSLHYPSD--SF---------------TDKIFDLIQE------V-RGPTCAKRLANYLD 74 (117)
Q Consensus 19 ~~~~~iiDvR~~~e~~~ghIpga~~ip~~--~l---------------~~~~~~~~~~------~-~g~~~a~~~~~~l~ 74 (117)
.++++|||||++.||..||||||+|||.. .+ ...+..+... | .|...+..++
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~---- 79 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTA---- 79 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHH----
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHH----
Confidence 35789999999999999999999999988 43 2222333212 3 3441233333
Q ss_pred HHHHhCCCceEEEccccHHHHHhCCCCccccC
Q 033515 75 EVKEDTGINSIFVLERGFKGWEASGKPVCRCT 106 (117)
Q Consensus 75 ~~l~~~G~~~v~~l~gG~~~W~~~g~~~~~~~ 106 (117)
..|+ +||++|++|+|| |.. +|+++..
T Consensus 80 ~~L~-~G~~~v~~l~GG---W~~--~p~~~~~ 105 (230)
T 2eg4_A 80 FFLG-LGGLEVQLWTEG---WEP--YATEKEE 105 (230)
T ss_dssp HHHH-HTTCCEEEECSS---CGG--GCCBCSC
T ss_pred HHHH-cCCceEEEeCCC---Ccc--CcccCCC
Confidence 3567 999999999999 877 7776543
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.9e-13 Score=96.50 Aligned_cols=89 Identities=17% Similarity=0.303 Sum_probs=60.7
Q ss_pred ccCHHHHHhhhcC----CCeEEEecCCCCccc-----------CCcccccccCCccchhH---------------HHHHH
Q 033515 7 YISGSQLLSLKRR----PNIAVIDVRDDERSY-----------DGHITGSLHYPSDSFTD---------------KIFDL 56 (117)
Q Consensus 7 ~is~~e~~~~~~~----~~~~iiDvR~~~e~~-----------~ghIpga~~ip~~~l~~---------------~~~~~ 56 (117)
.++.+++.+.++. ++++|||+|++.+|. .||||||+|+|...+.. .+...
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 3567777777764 246899999988873 59999999999876431 01111
Q ss_pred -h-------hh-------ccChhhhHHHHHHHHHHHHhCCCceEEEccccHHHHHhCCC
Q 033515 57 -I-------QE-------VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGK 100 (117)
Q Consensus 57 -~-------~~-------~~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W~~~g~ 100 (117)
. .. .+|.+ |...+-.|.. +||++|++|+|+|..|.....
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvt-A~~~~laL~~----lG~~~v~lYdGSWsEW~~r~~ 318 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVS-GVIIKTALEL----AGVPNVRLYDGSWTEWVLKSG 318 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHH-HHHHHHHHHH----TTCCSEEEESSHHHHHHHHHC
T ss_pred HHHhhcCCCCCCCEEEECChHHH-HHHHHHHHHH----cCCCCceeCCCcHHHhccccC
Confidence 0 01 35666 4333334444 999999999999999986543
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.06 E-value=5.8e-11 Score=87.27 Aligned_cols=72 Identities=22% Similarity=0.201 Sum_probs=50.4
Q ss_pred CCeEEEecCCCCcccCCcccccccCCcc-chhHHHHHHhhh-------ccChhhhHHHHHHHHHHHHhCCCceEEE-ccc
Q 033515 20 PNIAVIDVRDDERSYDGHITGSLHYPSD-SFTDKIFDLIQE-------VRGPTCAKRLANYLDEVKEDTGINSIFV-LER 90 (117)
Q Consensus 20 ~~~~iiDvR~~~e~~~ghIpga~~ip~~-~l~~~~~~~~~~-------~~g~~~a~~~~~~l~~~l~~~G~~~v~~-l~g 90 (117)
++++|||+|++.+|..||||||+|||.. .+..+...+... +.+.+ +..+++.|++ +||++|+. ++|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~~~~~~~vvly~~~~~-a~~a~~~L~~----~G~~~v~~~l~g 369 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYLNYDQEINLIGDYHL-VSKATHTLQL----IGYDDIAGYQLP 369 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTTCCTTSCEEEESCHHH-HHHHHHHHHT----TTCCCEEEEECC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhccCCCCeEEEEECCch-HHHHHHHhhh----hhcccccccccC
Confidence 5789999999999999999999999987 466666654322 33333 4555665555 99999986 677
Q ss_pred cHHHHH
Q 033515 91 GFKGWE 96 (117)
Q Consensus 91 G~~~W~ 96 (117)
+...|.
T Consensus 370 ~~~~~~ 375 (466)
T 3r2u_A 370 QSKIQT 375 (466)
T ss_dssp C-----
T ss_pred cccccH
Confidence 655443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=95.92 E-value=0.014 Score=36.44 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=29.3
Q ss_pred ccCHHHHHhhhcCCCeEEEecCCCCcc------------cCC-cccccccCCccc
Q 033515 7 YISGSQLLSLKRRPNIAVIDVRDDERS------------YDG-HITGSLHYPSDS 48 (117)
Q Consensus 7 ~is~~e~~~~~~~~~~~iiDvR~~~e~------------~~g-hIpga~~ip~~~ 48 (117)
.++++++..+.+.+-..|||+|++.|. ... +|+|.+|+|...
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~ 83 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTA 83 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCT
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCC
Confidence 456777777665444579999987662 233 488899999763
No 66
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=95.70 E-value=0.00088 Score=42.92 Aligned_cols=27 Identities=30% Similarity=0.261 Sum_probs=23.7
Q ss_pred eEEEecCCCCcccCCcccccccCCccchhHH
Q 033515 22 IAVIDVRDDERSYDGHITGSLHYPSDSFTDK 52 (117)
Q Consensus 22 ~~iiDvR~~~e~~~ghIpga~~ip~~~l~~~ 52 (117)
.++||||.+.||. |||+|||...|+.+
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~~ 148 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEVE 148 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHHh
Confidence 3899999999998 99999999877643
No 67
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=40.24 E-value=51 Score=20.43 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=19.9
Q ss_pred cChhhhHHHHHHHHHHHHhCCCceEEEccc
Q 033515 61 RGPTCAKRLANYLDEVKEDTGINSIFVLER 90 (117)
Q Consensus 61 ~g~~~a~~~~~~l~~~l~~~G~~~v~~l~g 90 (117)
.-.++++.++..+.+.++++|++.|.+.--
T Consensus 69 sTpyAAq~aa~~~a~~a~e~Gi~~v~V~vk 98 (151)
T 2xzm_K 69 SSPYAAMQAAIDVVNRCKELKINALHIKLR 98 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 345566666666666667799998875553
No 68
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.58 E-value=38 Score=20.60 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=18.9
Q ss_pred cChhhhHHHHHHHHHHHHhCCCceEEEcc
Q 033515 61 RGPTCAKRLANYLDEVKEDTGINSIFVLE 89 (117)
Q Consensus 61 ~g~~~a~~~~~~l~~~l~~~G~~~v~~l~ 89 (117)
.-.++++.++..+.+.+++.|++.|.+.-
T Consensus 55 sTp~AA~~aa~~~~~~a~e~Gi~~v~V~v 83 (137)
T 3j20_M 55 PSPYAAMLAARRAAEEALEKGIVGVHIRV 83 (137)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 34555666666665566778998877444
No 69
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=36.10 E-value=43 Score=16.63 Aligned_cols=22 Identities=36% Similarity=0.412 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHhCCCceEEE
Q 033515 66 AKRLANYLDEVKEDTGINSIFV 87 (117)
Q Consensus 66 a~~~~~~l~~~l~~~G~~~v~~ 87 (117)
+..++..|-+.+.++||.+|-+
T Consensus 16 aekfaailikvfaelgyndinv 37 (62)
T 2gjh_A 16 AEKFAAILIKVFAELGYNDINV 37 (62)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHHHHHhCccccee
Confidence 5566666767788899986553
No 70
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=35.91 E-value=56 Score=17.92 Aligned_cols=25 Identities=32% Similarity=0.254 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHhCCCceEEEcc
Q 033515 65 CAKRLANYLDEVKEDTGINSIFVLE 89 (117)
Q Consensus 65 ~a~~~~~~l~~~l~~~G~~~v~~l~ 89 (117)
.+..++..|-+.+.++||.++-+..
T Consensus 59 eaekfaailikvfaelgyndinvtf 83 (106)
T 1qys_A 59 EAEKFAAILIKVFAELGYNDINVTF 83 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCcceeEEE
Confidence 3667777777788889998776443
No 71
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=34.56 E-value=27 Score=22.18 Aligned_cols=20 Identities=10% Similarity=0.180 Sum_probs=13.4
Q ss_pred HHHHHHHHHhCCCceEE-Ecc
Q 033515 70 ANYLDEVKEDTGINSIF-VLE 89 (117)
Q Consensus 70 ~~~l~~~l~~~G~~~v~-~l~ 89 (117)
...|+++|..+||++|. ++.
T Consensus 24 MadLr~~l~~lGf~~V~TyI~ 44 (183)
T 2hiy_A 24 MAELRQELTNLGLEKVESYIN 44 (183)
T ss_dssp HHHHHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHHHHcCCccceEEEe
Confidence 34455566679999888 444
No 72
>1pp7_U 39 kDa initiator binding protein; core promoter, transcription initation, IBP39, T. vaginalis, transcription/DNA complex; 2.45A {Trichomonas vaginalis} SCOP: a.4.5.44 PDB: 1pp8_U
Probab=28.33 E-value=9.1 Score=22.96 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=22.7
Q ss_pred HHHhCCCceEEEccccHHHHHhCCCCccc
Q 033515 76 VKEDTGINSIFVLERGFKGWEASGKPVCR 104 (117)
Q Consensus 76 ~l~~~G~~~v~~l~gG~~~W~~~g~~~~~ 104 (117)
-|+.+||++..-=.+|+..|..+|+...+
T Consensus 86 NLRdL~F~Q~q~dk~g~T~W~~~gFtk~S 114 (131)
T 1pp7_U 86 NLRDLAFEQLQHDKGGWTQWKRSGFTRNS 114 (131)
T ss_dssp HHHHTTCEEEEEEETTEEEEECTTEETTE
T ss_pred cchhccceeeccccCceeEEecCCccccc
Confidence 36679998877766999999998875544
No 73
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=27.20 E-value=79 Score=16.99 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHhCCCceEEEcccc
Q 033515 66 AKRLANYLDEVKEDTGINSIFVLERG 91 (117)
Q Consensus 66 a~~~~~~l~~~l~~~G~~~v~~l~gG 91 (117)
+......+++.|.++||+++-+-..|
T Consensus 62 akelleliarllqklgykdinvrvng 87 (96)
T 2jvf_A 62 AKELLELIARLLQKLGYKDINVRVNG 87 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEET
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEcC
Confidence 45555566667777999977654433
No 74
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=27.17 E-value=93 Score=18.25 Aligned_cols=23 Identities=17% Similarity=0.344 Sum_probs=12.0
Q ss_pred HHHHHHhCCCceEEEccccHHHH
Q 033515 73 LDEVKEDTGINSIFVLERGFKGW 95 (117)
Q Consensus 73 l~~~l~~~G~~~v~~l~gG~~~W 95 (117)
+...|+..||..|..-..|..++
T Consensus 28 l~~~L~~~G~~~v~~a~~g~~al 50 (134)
T 3to5_A 28 VKNLLRDLGFNNTQEADDGLTAL 50 (134)
T ss_dssp HHHHHHHTTCCCEEEESSHHHHH
T ss_pred HHHHHHHcCCcEEEEECCHHHHH
Confidence 33344446765555455555554
No 75
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=26.26 E-value=80 Score=21.02 Aligned_cols=21 Identities=10% Similarity=0.064 Sum_probs=15.4
Q ss_pred CcccccccCCccchhHHHHHH
Q 033515 36 GHITGSLHYPSDSFTDKIFDL 56 (117)
Q Consensus 36 ghIpga~~ip~~~l~~~~~~~ 56 (117)
.+.||+++++.+.+...+.++
T Consensus 82 ~~fPGTisl~~~tl~~~l~di 102 (254)
T 3lub_A 82 RELPFCIHTRYATQQAILEDI 102 (254)
T ss_dssp TTSTTCCBCCHHHHHHHHHHH
T ss_pred cCcCCeEEeCHHHHHHHHHHH
Confidence 457999999998877655443
No 76
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=25.58 E-value=47 Score=20.45 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=23.6
Q ss_pred ccChhh-hHHHHHHHHHHHHhCCCceEEEccccHHHH
Q 033515 60 VRGPTC-AKRLANYLDEVKEDTGINSIFVLERGFKGW 95 (117)
Q Consensus 60 ~~g~~~-a~~~~~~l~~~l~~~G~~~v~~l~gG~~~W 95 (117)
|.|+.| |..+...++..+++.|..++.+...|...|
T Consensus 13 C~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 13 CLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp ESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred eCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 667655 444444455556667876677878888877
No 77
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=25.15 E-value=69 Score=21.33 Aligned_cols=23 Identities=22% Similarity=0.482 Sum_probs=16.1
Q ss_pred CcccccccCCccchhHHHHHHhh
Q 033515 36 GHITGSLHYPSDSFTDKIFDLIQ 58 (117)
Q Consensus 36 ghIpga~~ip~~~l~~~~~~~~~ 58 (117)
.+.||++++..+.+...+.++..
T Consensus 82 ~~fPGTisl~~~tl~~~l~di~~ 104 (260)
T 1v7z_A 82 NHFPGTTSLDGATLTGTVQDIIR 104 (260)
T ss_dssp TTSSSCBCBCHHHHHHHHHHHHH
T ss_pred cCCCceEEeCHHHHHHHHHHHHH
Confidence 45799999999887765544433
No 78
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=23.21 E-value=1e+02 Score=18.47 Aligned_cols=43 Identities=28% Similarity=0.252 Sum_probs=26.2
Q ss_pred cChhhhHHHHHHHHHHHHhCCCceEEEccccH--------HHHHhCCCCcc
Q 033515 61 RGPTCAKRLANYLDEVKEDTGINSIFVLERGF--------KGWEASGKPVC 103 (117)
Q Consensus 61 ~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~--------~~W~~~g~~~~ 103 (117)
.-.++++.++..+.+..++.|++.|.+.--|+ .++...|..+.
T Consensus 56 ~tp~AA~~aa~~~~~~~~~~Gi~~v~V~vkG~G~Gre~airaL~~~Gl~I~ 106 (129)
T 2vqe_K 56 GTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVK 106 (129)
T ss_dssp GSHHHHHHHHHHHHHHHHTTTCCEEEEEEESCCTTHHHHHHHHHTSSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCeEEEEEEECCCCCHHHHHHHHHHCCCEEE
Confidence 34455666666666666779999887555332 24555565544
No 79
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=22.48 E-value=1.2e+02 Score=17.73 Aligned_cols=43 Identities=21% Similarity=0.319 Sum_probs=26.0
Q ss_pred cChhhhHHHHHHHHHHHHhCCCceEEEccccH--------HHHHhCCCCcc
Q 033515 61 RGPTCAKRLANYLDEVKEDTGINSIFVLERGF--------KGWEASGKPVC 103 (117)
Q Consensus 61 ~g~~~a~~~~~~l~~~l~~~G~~~v~~l~gG~--------~~W~~~g~~~~ 103 (117)
...++++.++..+.+..++.|++.|.+.--|+ .+...+|..+.
T Consensus 46 ~tp~AA~~aa~~~~~~~~~~Gi~~v~v~vkG~G~Gr~~airaL~~~Gl~I~ 96 (117)
T 3r8n_K 46 STPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRIT 96 (117)
T ss_dssp SSHHHHHHHHHHHHHHHTTSCCCEEEEEEECSSSSTTHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEEEEeCCCccHHHHHHHHHhCCCEEE
Confidence 34555666666665566779998877555333 23455666554
Done!