BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033520
(117 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224103703|ref|XP_002313162.1| predicted protein [Populus trichocarpa]
gi|222849570|gb|EEE87117.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 11/107 (10%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPS-SSGKPGQF---SPVHLRTVRT--VTLATASPKPV 54
MA+SSG+F+T FLS ET PS +S P +F P + R VR+ VT ATAS
Sbjct: 1 MAISSGIFST-FLSTETVPLLKFPSPTSTLPLRFLAAPPANPRMVRSTVVTCATAS---- 55
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TG R PRGIMKPRRVSPEM F+GAPE+ RTQALKLIWAHIK+HNLQ
Sbjct: 56 TGNRAPRGIMKPRRVSPEMADFIGAPEVSRTQALKLIWAHIKEHNLQ 102
>gi|297802548|ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
gi|297314994|gb|EFH45417.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 1 MAVSSGVFTTTFLSPETA--SSFLKPSSSGKPGQFSPVHLRTVRTVTLATAS---PKPVT 55
MA+SSG+F+TTFL +TA S L SS + P +LR VR VT ATA+ P T
Sbjct: 1 MALSSGIFSTTFLCVDTAPFRSSLLSPSSLRLSPHRPANLRMVRAVTSATAASSDPTTTT 60
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
REPRGIMKPR VSPEM+ VG PEIPRTQALK IWA+IK+H+LQ
Sbjct: 61 KTREPRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
>gi|15235320|ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis thaliana]
gi|7270379|emb|CAB80146.1| putative protein [Arabidopsis thaliana]
gi|24899741|gb|AAN65085.1| putative protein [Arabidopsis thaliana]
gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 144
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 1 MAVSSGVFTTTFLSPETA---SSFLKPSSSGKPGQFSPVH---LRTVRTVTLATA---SP 51
MA+SSG+F+TTFL +TA SS L PSS + SP H LR VR VT A A P
Sbjct: 1 MALSSGIFSTTFLCVDTAPLRSSMLSPSSL----RLSPNHPTNLRMVRAVTSAAAASSDP 56
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T REPRGIMKPR VS M+ VG PEIPRTQALK IWA+IK+H+LQ
Sbjct: 57 TTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
>gi|255555227|ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
gi|223542031|gb|EEF43575.1| brg-1 associated factor, putative [Ricinus communis]
Length = 141
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPSSSGKPGQFSP---VHLRTVRTVTLATASPKPVTGK 57
MA++SG+ ++ LSP+T S FLKP S +P +LR VRTVT +
Sbjct: 1 MAITSGILSSV-LSPQTVS-FLKPYPSSSMLLVAPPSSANLRMVRTVTCCATVSSQQQEQ 58
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R PRGIMKPRRVSPEM VGA EIPRTQALK IWAHIK++NLQ
Sbjct: 59 RRPRGIMKPRRVSPEMAELVGASEIPRTQALKRIWAHIKENNLQ 102
>gi|14423526|gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
Length = 144
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 1 MAVSSGVFTTTFLSPETA---SSFLKPSSSGKPGQFSPVH---LRTVRTVTLATA---SP 51
MA+SSG+F+TTFL +TA SS L PSS + SP H LR VR VT A A P
Sbjct: 1 MALSSGIFSTTFLCVDTAPLRSSMLTPSSL----RLSPNHPTNLRMVRAVTSAAAASSDP 56
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T REPRGIMKPR VS M+ VG PEIPRTQALK IWA+IK+H+LQ
Sbjct: 57 TTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
>gi|225429337|ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
Length = 145
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPSSSGKPGQFSP-----VHLRTVRTVTLATASPKPV- 54
MA+S GV +T F S ETAS F K + S + P +LR VRTVT A AS P
Sbjct: 1 MAMSLGVIST-FFSGETAS-FSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAA 58
Query: 55 -TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TGKREPRGIMKPRR+SPEM+ F+G PEIPRTQALK IWA+IKQHNLQ
Sbjct: 59 ATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQ 106
>gi|147843362|emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
Length = 145
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPSSSGKPGQFSP-----VHLRTVRTVTLATASPKPV- 54
MA+S GV +TF S ETAS F K + S + P +LR VRTVT A AS P
Sbjct: 1 MAMSLGV-XSTFFSGETAS-FSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAA 58
Query: 55 -TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TGKREPRGIMKPRR+SPEM+ F+G PEIPRTQALK IWA+IKQHNLQ
Sbjct: 59 ATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQ 106
>gi|21553903|gb|AAM62986.1| unknown [Arabidopsis thaliana]
Length = 144
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 71/110 (64%), Gaps = 13/110 (11%)
Query: 1 MAVSSGVFTTTFLSPETAS---SFLKPSSSGKPGQFSPVH---LRTVRTVTLATA---SP 51
MA+SSG+F+ TFL +TA S L PSS + SP H LR VR VT A A P
Sbjct: 1 MALSSGIFSITFLCVDTAPLRISMLSPSSL----RLSPNHPTNLRMVRAVTSAAAASSDP 56
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T REPRGIMKPR VS M+ VG PEIPRTQALK IWA+IK+H+LQ
Sbjct: 57 TTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
>gi|297836126|ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331785|gb|EFH62204.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 141
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 1 MAVSSGVFTTTFLSPETASSFLK--PSSSGKPGQFSPVHLRTVRTVTLATASPKP-VTGK 57
MAVSSG F+T FL +T S + P SS + LR VR VT ATAS +P T K
Sbjct: 1 MAVSSGTFST-FLCVKTTSFHNQSTPPSSLRLASHPAAKLRLVRAVTSATASSEPTATNK 59
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R PRGIMKPR VSPEM+ V PEI RTQALK IWA+IK+H+LQ
Sbjct: 60 RVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQ 103
>gi|18397658|ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein [Arabidopsis thaliana]
gi|3650030|gb|AAC61285.1| expressed protein [Arabidopsis thaliana]
gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPS---SSGKPGQFSPVHLRTVRTVTLATASPKP-VTG 56
MAVSSG F+T FL +T +SF PS SS + LR VR VT AT S +P T
Sbjct: 1 MAVSSGTFST-FLCIKT-TSFRNPSTPLSSLRFASHPAAKLRLVRAVTSATESSEPTATN 58
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR PRGIMKPR VSPEM+ V PEI RTQALK IWA+IK+H+LQ
Sbjct: 59 KRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQ 103
>gi|19698859|gb|AAL91165.1| unknown protein [Arabidopsis thaliana]
gi|24899679|gb|AAN65054.1| unknown protein [Arabidopsis thaliana]
Length = 141
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPS---SSGKPGQFSPVHLRTVRTVTLATASPKP-VTG 56
MAVSSG F+T FL +T + F PS SS + LR VR VT AT S +P T
Sbjct: 1 MAVSSGTFST-FLCIKT-TFFRNPSTPLSSLRFASHPAAKLRLVRAVTSATESSEPTATN 58
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR PRGIMKPR VSPEM+ V PEI RTQALK IWA+IK+H+LQ
Sbjct: 59 KRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQ 103
>gi|224056218|ref|XP_002298761.1| predicted protein [Populus trichocarpa]
gi|118485810|gb|ABK94753.1| unknown [Populus trichocarpa]
gi|222846019|gb|EEE83566.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 12 FLSPETASSFLKPSSSGKPG----QFSPVHLRTVRTV-TLATASPKPVTGKREPRGIMKP 66
FLS ET P + P PV+LR RTV T ATAS TG R P GIMKP
Sbjct: 11 FLSTETVPLLKPPFHTSSPSLRILAARPVNLRMGRTVVTCATAS----TGNRAPSGIMKP 66
Query: 67 RRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+RVSPEM FVGAPE+ RTQ LKLIWAHIK+ NLQ
Sbjct: 67 KRVSPEMADFVGAPEVSRTQVLKLIWAHIKERNLQ 101
>gi|449438339|ref|XP_004136946.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 140
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 14 SPETASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEM 73
SP T+SS LK Q LR RTVT A AS + REPRGI KPR++SPE+
Sbjct: 20 SPTTSSSNLK-----HLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPEL 74
Query: 74 EAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+A VGAPEI RTQALK+IWA+IK++NLQ
Sbjct: 75 QALVGAPEISRTQALKVIWAYIKENNLQ 102
>gi|449533010|ref|XP_004173470.1| PREDICTED: uncharacterized protein LOC101229053, partial [Cucumis
sativus]
Length = 102
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 14 SPETASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEM 73
SP T+SS LK Q LR RTVT A AS + REPRGI KPR++SPE+
Sbjct: 20 SPTTSSSNLK-----HLNQLPLPDLRFPRTVTFALASKQATAPSREPRGITKPRKISPEL 74
Query: 74 EAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+A VGAPEI RTQALK+IWA+IK++NLQ
Sbjct: 75 QALVGAPEISRTQALKVIWAYIKENNLQ 102
>gi|21593713|gb|AAM65680.1| unknown [Arabidopsis thaliana]
Length = 141
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MAVSSGVFTTTFLSPETASSFLKPS---SSGKPGQFSPVHLRTVRTVTLATASPKP-VTG 56
MAVSS F+T FL +T +SF PS SS + VR VT AT S +P T
Sbjct: 1 MAVSSRTFST-FLCIKT-TSFRNPSTPLSSLRFASHPAAKHCLVRAVTSATESSEPTATN 58
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR PRGIMKPR VSPEM+ V PEI RTQALK IWA+IK+H+LQ
Sbjct: 59 KRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQ 103
>gi|351725697|ref|NP_001235054.1| uncharacterized protein LOC100499975 [Glycine max]
gi|255628211|gb|ACU14450.1| unknown [Glycine max]
Length = 139
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 18/110 (16%)
Query: 1 MAVSSGVF---TTTFLSPETASSFLK--PSSSGKPGQFSPVHLRTVR-TVTLATASPKPV 54
MA+SSG+F ++ L P +F++ PSS+ LRT+ + + S KP
Sbjct: 1 MALSSGLFLCSSSRVLPPPETHTFMRTRPSSAA---------LRTISVSCCTVSQSSKPA 51
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
R+ RGIMKPR+VSPEME VGAPE+ RTQ LK IWA+IK +NLQ T
Sbjct: 52 ---RKIRGIMKPRKVSPEMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPT 98
>gi|357480689|ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355511965|gb|AES93588.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388522227|gb|AFK49175.1| unknown [Medicago truncatula]
Length = 143
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 41 VRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+R VT AT S P TG + RGIMKP+++SPEM+ VG PEI RTQALK IWAHIK+HNL
Sbjct: 45 LRIVTSATVSQPPPTGGK-IRGIMKPKKISPEMQDLVGQPEISRTQALKSIWAHIKEHNL 103
Query: 101 Q 101
Q
Sbjct: 104 Q 104
>gi|388522755|gb|AFK49439.1| unknown [Lotus japonicus]
Length = 132
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 1 MAVSS-GVFTTTFLSPETASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKRE 59
MA S+ G+F++ LS + SF P P LR VR V + +P +
Sbjct: 1 MAASTLGLFSSFTLSFRSQPSFALPP---------PPTLRMVRPVVTSATVSQPSAAGNK 51
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
RGIMKPR++SPEM++ G PEI RTQALK IWA+IK++NLQ
Sbjct: 52 IRGIMKPRKISPEMQSICGVPEISRTQALKHIWAYIKENNLQ 93
>gi|351725129|ref|NP_001235290.1| uncharacterized protein LOC100306198 [Glycine max]
gi|255627841|gb|ACU14265.1| unknown [Glycine max]
Length = 148
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 15/90 (16%)
Query: 16 ETASSFLKPSSSGKPGQFSPVHLRTVRT--VTLAT--ASPKPVTGKREPRGIMKPRRVSP 71
ET + ++PS+S LR +RT +T T S KP R+ RGIMKPR+VSP
Sbjct: 26 ETHTFMMRPSASS--------GLRMMRTSRITCCTLSQSSKPA---RKIRGIMKPRKVSP 74
Query: 72 EMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
EME VGAPE+ RTQ LK IWA+IK +NLQ
Sbjct: 75 EMEDLVGAPEMARTQVLKRIWAYIKDNNLQ 104
>gi|357152250|ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
distachyon]
Length = 153
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
KP KR GIMKP+ +SPE+ FVG A E+PRT+ALK+IWAHIK +NLQ
Sbjct: 64 KPKPKKRAASGIMKPKPISPELREFVGGAEELPRTEALKIIWAHIKGNNLQ 114
>gi|297601729|ref|NP_001051349.2| Os03g0761000 [Oryza sativa Japonica Group]
gi|255674919|dbj|BAF13263.2| Os03g0761000 [Oryza sativa Japonica Group]
Length = 121
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ KPR VSP ++A VGA EIPRT+ALK +WA+IKQHNLQ
Sbjct: 66 GLTKPRLVSPALQAVVGAAEIPRTEALKRLWAYIKQHNLQ 105
>gi|14488372|gb|AAK63939.1|AC084282_20 hypothetical protein [Oryza sativa Japonica Group]
gi|108711209|gb|ABF99004.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|125545801|gb|EAY91940.1| hypothetical protein OsI_13627 [Oryza sativa Indica Group]
gi|215769247|dbj|BAH01476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ KPR VSP ++A VGA EIPRT+ALK +WA+IKQHNLQ
Sbjct: 66 GLTKPRLVSPALQAVVGAAEIPRTEALKRLWAYIKQHNLQ 105
>gi|108862723|gb|ABA98693.2| SWIB/MDM2 domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 144
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 57 KREPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
KR GIMKP+ +S E+ FVG A E+PRT+ALK+IWAHIK +NLQ
Sbjct: 74 KRAASGIMKPKPISAELREFVGGAEELPRTEALKIIWAHIKGNNLQ 119
>gi|326507382|dbj|BAK03084.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326515542|dbj|BAK07017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR GI PR VSP ++AF+GA E+PRT+A+K IWA+IKQ+NLQ
Sbjct: 53 KRAATGITIPRPVSPALQAFMGAAEVPRTEAMKRIWAYIKQNNLQ 97
>gi|242085638|ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
gi|241943937|gb|EES17082.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
Length = 147
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
GI KP+ +SPE+ FVG APE+PRT+A+KL+WAHIK +NLQ
Sbjct: 68 GITKPKPISPELREFVGGAPELPRTEAIKLVWAHIKGNNLQ 108
>gi|226532221|ref|NP_001150804.1| LOC100284437 [Zea mays]
gi|195641974|gb|ACG40455.1| SWIb domain-containing protein [Zea mays]
Length = 142
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+PK K+ GI +P+ VSP ++A VG P IPRT+ LK +WA+IK+HNLQ
Sbjct: 55 AAPK----KKRATGITQPKSVSPALQAIVGDPVIPRTEVLKRLWAYIKEHNLQ 103
>gi|242032907|ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
gi|241917702|gb|EER90846.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
Length = 143
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ GI +P+ VSP ++A VG P IPRT+ALK +WA+IK+HNLQ
Sbjct: 60 KKRATGITQPKPVSPALQAIVGEPVIPRTEALKRLWAYIKEHNLQ 104
>gi|326511287|dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 157
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR GI PR VSP ++AF+GA E+PRT+A+K IWA+IKQ+NLQ
Sbjct: 70 NKKRAATGITIPRPVSPALQAFMGAAEVPRTEAMKRIWAYIKQNNLQ 116
>gi|413932997|gb|AFW67548.1| SWIb domain-containing protein [Zea mays]
Length = 145
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+PK K+ GI +P+ VSP ++A VG P IPRT+ LK +WA+IK+HNLQ
Sbjct: 58 AAPK----KKRATGITQPKSVSPALQAIVGDPVIPRTEVLKRLWAYIKEHNLQ 106
>gi|116784051|gb|ABK23195.1| unknown [Picea sitchensis]
gi|148907345|gb|ABR16808.1| unknown [Picea sitchensis]
Length = 129
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 37 HLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
+R +T+ + A + +G R GI +PR +SP M+ F+G EIPRT+A+K IW +IK
Sbjct: 25 QMRRSQTLVVRCADTQKESGIRRGGGITQPRPISPAMQKFLGVSEIPRTKAIKKIWEYIK 84
Query: 97 QHNLQ 101
+ +LQ
Sbjct: 85 EKDLQ 89
>gi|357114653|ref|XP_003559112.1| PREDICTED: upstream activation factor subunit UAF30-like
[Brachypodium distachyon]
Length = 138
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GI PR VSP ++A VGA E+PRT+A+K +WA+IKQ+NLQ
Sbjct: 58 GITMPRPVSPALQAVVGASEVPRTEAIKRLWAYIKQNNLQ 97
>gi|242063920|ref|XP_002453249.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
gi|241933080|gb|EES06225.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
Length = 131
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
P T R P GI KP VS E+ F G APE+ R+QA+KLIWAHIK H LQ
Sbjct: 42 PSTEPRVPTGISKPIPVSAELSRFAGGAPEVARSQAVKLIWAHIKAHGLQ 91
>gi|226498430|ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
gi|195619068|gb|ACG31364.1| hypothetical protein [Zea mays]
gi|223975083|gb|ACN31729.1| unknown [Zea mays]
gi|413942035|gb|AFW74684.1| hypothetical protein ZEAMMB73_000211 [Zea mays]
Length = 143
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
GI KP+ +S E+ FVG A E+PRT+A+KL+WAHIK +NLQ
Sbjct: 64 GITKPKPISTELREFVGGAAELPRTEAIKLVWAHIKGNNLQ 104
>gi|224123994|ref|XP_002319215.1| predicted protein [Populus trichocarpa]
gi|222857591|gb|EEE95138.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 60 PRGIMKPRRVSPEMEAFVGA-PEIPRTQALKLIWAHIKQHNLQWKT 104
PRGI+KP VSP + F+G PE R +A+K IWAHIK HNLQ T
Sbjct: 43 PRGILKPNPVSPVLGDFLGGVPESSRAEAVKKIWAHIKLHNLQNPT 88
>gi|296083088|emb|CBI22492.3| unnamed protein product [Vitis vinifera]
Length = 68
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+ F+G PEIPRTQALK IWA+IKQHNLQ
Sbjct: 1 MQDFLGVPEIPRTQALKQIWAYIKQHNLQ 29
>gi|413926757|gb|AFW66689.1| hypothetical protein ZEAMMB73_751541 [Zea mays]
Length = 108
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
T R P GI KP VS E F G APE+ R++A+KLIWAHIK H LQ
Sbjct: 47 TKPRLPTGITKPMPVSDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQ 94
>gi|224086383|ref|XP_002307875.1| predicted protein [Populus trichocarpa]
gi|222853851|gb|EEE91398.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 41 VRTVTLATASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQH 98
V T +A S PV KR P G+ K VSPE++A VG P +PRT+ +K +W +I+++
Sbjct: 177 VVTNEVAKESSAPVGSKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEIVKQLWQYIRKN 236
Query: 99 NLQ 101
NLQ
Sbjct: 237 NLQ 239
>gi|212722732|ref|NP_001132227.1| uncharacterized protein LOC100193662 [Zea mays]
gi|195621502|gb|ACG32581.1| SWIb domain-containing protein [Zea mays]
Length = 134
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
R P GI KP VS E F G APE+ R++A+KLIWAHIK H LQ
Sbjct: 50 RLPTGITKPMPVSDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQ 94
>gi|194693822|gb|ACF80995.1| unknown [Zea mays]
Length = 134
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
R P GI KP VS E F G APE+ R++A+KLIWAHIK H LQ
Sbjct: 50 RLPTGITKPMPVSDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQ 94
>gi|218186922|gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
gi|222617148|gb|EEE53280.1| hypothetical protein OsJ_36231 [Oryza sativa Japonica Group]
Length = 78
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 64 MKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
MKP+ +S E+ FVG A E+PRT+ALK+IWAHIK +NLQ
Sbjct: 1 MKPKPISAELREFVGGAEELPRTEALKIIWAHIKGNNLQ 39
>gi|21537175|gb|AAM61516.1| unknown [Arabidopsis thaliana]
Length = 385
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 43 TVTLATASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+V A P KR+ P G+ K RVSPE+E VG P +PRT+ ++ +WA+I+++NL
Sbjct: 175 SVNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNL 234
Query: 101 Q 101
Q
Sbjct: 235 Q 235
>gi|18415906|ref|NP_567661.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|16604705|gb|AAL24145.1| unknown protein [Arabidopsis thaliana]
gi|20258979|gb|AAM14205.1| unknown protein [Arabidopsis thaliana]
gi|332659200|gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 385
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 43 TVTLATASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+V A P KR+ P G+ K RVSPE+E VG P +PRT+ ++ +WA+I+++NL
Sbjct: 175 SVNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNL 234
Query: 101 Q 101
Q
Sbjct: 235 Q 235
>gi|33667910|gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
Length = 148
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+GI+KP+ +SP ++ FVG EI RT A+K IW +IK +NLQ
Sbjct: 67 KGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQ 107
>gi|118485716|gb|ABK94708.1| unknown [Populus trichocarpa]
Length = 385
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 41 VRTVTLATASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQH 98
V T +A S PV KR P G+ K VSPE++A VG P +PRT+ +K +W +I+++
Sbjct: 177 VVTNEVAKESSAPVGSKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEIVKQLWQYIRKN 236
Query: 99 NLQ 101
NLQ
Sbjct: 237 NLQ 239
>gi|2832686|emb|CAA16786.1| putative protein [Arabidopsis thaliana]
gi|7269082|emb|CAB79191.1| putative protein [Arabidopsis thaliana]
Length = 369
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 43 TVTLATASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+V A P KR+ P G+ K RVSPE+E VG P +PRT+ ++ +WA+I+++NL
Sbjct: 175 SVNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNL 234
Query: 101 Q 101
Q
Sbjct: 235 Q 235
>gi|449523960|ref|XP_004168991.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 17 TASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAF 76
++ S LKPS++ GQ S P P G++K ++VSP + F
Sbjct: 36 SSKSTLKPSTAAVSGQKS---------------KPAPKKVANPSGGLLKTQKVSPTLAGF 80
Query: 77 VGAPEIPRTQALKLIWAHIKQHNLQ 101
+G EI RT+A+K IWA+IK +NLQ
Sbjct: 81 LGQSEIARTEAVKQIWAYIKLNNLQ 105
>gi|449533967|ref|XP_004173941.1| PREDICTED: uncharacterized protein LOC101232239, partial [Cucumis
sativus]
Length = 211
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG PE+PRT+ +K +WA+I+++NLQ
Sbjct: 128 PGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQ 169
>gi|449508329|ref|XP_004163283.1| PREDICTED: uncharacterized LOC101217066, partial [Cucumis sativus]
Length = 341
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG PE+PRT+ +K +WA+I+++NLQ
Sbjct: 152 PGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQ 193
>gi|449465075|ref|XP_004150254.1| PREDICTED: uncharacterized protein LOC101217066 [Cucumis sativus]
Length = 342
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG PE+PRT+ +K +WA+I+++NLQ
Sbjct: 153 PGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQ 194
>gi|357146513|ref|XP_003574019.1| PREDICTED: protein TRI1-like [Brachypodium distachyon]
Length = 135
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAF-VGAPEIPRTQALKLIWAHIKQHNLQ 101
+E RGIM+P VS + F GAPEI R A+K++WAHIK +NLQ
Sbjct: 50 KELRGIMRPVPVSDALRRFPGGAPEISRANAIKIVWAHIKANNLQ 94
>gi|357484389|ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355513817|gb|AES95440.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388497934|gb|AFK37033.1| unknown [Medicago truncatula]
Length = 134
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 48 TASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TA K VT K GI K +V+ E+ F+GAPE+ RT+A+K +W +IK NLQ
Sbjct: 41 TAVKKTVTSK-STGGIQKVVQVTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQ 93
>gi|5430749|gb|AAD43149.1|AC007504_4 Hypothetical Protein [Arabidopsis thaliana]
Length = 386
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A + KP K++ G K +SPE++AF G P++ RT+ +K++W +IK++NLQ
Sbjct: 238 AKSEEKP---KKKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQ 289
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
PV K+ G K ++SP++E F+G ++ RT+ +K +WA+I++H+LQ
Sbjct: 92 PVKAKKRGGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQ 140
>gi|255559072|ref|XP_002520558.1| brg-1 associated factor, putative [Ricinus communis]
gi|223540218|gb|EEF41791.1| brg-1 associated factor, putative [Ricinus communis]
Length = 397
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 53 PVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
PV KR P G+ K VSPE++A VG P +PRT+ +K +WA+I+++NLQ
Sbjct: 201 PVGAKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEIVKQLWAYIRKNNLQ 251
>gi|361069165|gb|AEW08894.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|361069901|gb|AEW09262.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
Length = 81
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 37 HLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
+R + + + A +G R GI +PR +SP M+ F+G EIPRT+A+K IW +IK
Sbjct: 20 QMRRSQPLVVRCAETNKESGIRRGGGITQPRPISPAMQKFLGVSEIPRTKAIKKIWEYIK 79
Query: 97 QH 98
++
Sbjct: 80 EN 81
>gi|42562626|ref|NP_175375.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|63003862|gb|AAY25460.1| At1g49520 [Arabidopsis thaliana]
gi|332194317|gb|AEE32438.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 372
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A + KP K++ G K +SPE++AF G P++ RT+ +K++W +IK++NLQ
Sbjct: 238 AKSEEKP---KKKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQ 289
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
PV K+ G K ++SP++E F+G ++ RT+ +K +WA+I++H+LQ
Sbjct: 92 PVKAKKRGGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQ 140
>gi|297847268|ref|XP_002891515.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337357|gb|EFH67774.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 372
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
PV K+ G K ++SP++E F+G ++ RT+ +K +WA+I+QH+LQ
Sbjct: 92 PVKAKKRGGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIRQHDLQ 140
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A + KP K++ G K +SPE++AF G ++ RT+ ++++W +IK++NLQ
Sbjct: 238 AKSEEKP---KKKGGGFTKVCSLSPELQAFTGTAQLARTEVVRMLWKYIKENNLQ 289
>gi|302792146|ref|XP_002977839.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
gi|300154542|gb|EFJ21177.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
Length = 342
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 44 VTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ + ++PK K++ G+ K R+SPE++A +G +PRTQ +K +W +I+ HNLQ
Sbjct: 120 LAIEDSTPKE---KKKRGGLNKLCRLSPELQAIIGEESLPRTQVVKQLWVYIRAHNLQ 174
>gi|357459823|ref|XP_003600192.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355489240|gb|AES70443.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
Length = 350
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 48 TASPKPVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+A PKP KR P G+ K VSPE++ VG P +PRT+ +K +WA+IK++NLQ
Sbjct: 146 SAQPKP---KRRGGPGGLNKLCGVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQ 198
>gi|302795450|ref|XP_002979488.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
gi|300152736|gb|EFJ19377.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
Length = 320
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 44 VTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ + ++PK K++ G+ K R+SPE++A +G +PRTQ +K +W +I+ HNLQ
Sbjct: 120 LAIEDSTPKE---KKKRGGLNKLCRLSPELQAIIGEESLPRTQVVKQLWVYIRAHNLQ 174
>gi|224123268|ref|XP_002330274.1| predicted protein [Populus trichocarpa]
gi|222871309|gb|EEF08440.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 55 TGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TGK RG K +SP+++A VG PE+ RT+ +K +WA+I+++NLQ
Sbjct: 109 TGKVRKRGGFTKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQ 156
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SP+++ VG PE+ RT +K +WA+I++ NLQ
Sbjct: 262 KKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQ 306
>gi|359796570|ref|ZP_09299167.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
gi|359365533|gb|EHK67233.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
Length = 92
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 46 LATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+AT S KP T ++ MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 1 MATTS-KPATARKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWEYIKKHNLQ 55
>gi|17027265|gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Japonica Group]
Length = 303
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GKR+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 127 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQ 173
>gi|18398106|ref|NP_564382.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|12321306|gb|AAG50727.1|AC079041_20 hypothetical protein [Arabidopsis thaliana]
gi|12597845|gb|AAG60155.1|AC074360_20 hypothetical protein [Arabidopsis thaliana]
gi|21537302|gb|AAM61643.1| unknown [Arabidopsis thaliana]
gi|89001005|gb|ABD59092.1| At1g31760 [Arabidopsis thaliana]
gi|332193268|gb|AEE31389.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 112
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 42 RTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
RT+ A+ + VT E +GI K R VS ++ +F G E+ R ALK +W ++K HNLQ
Sbjct: 12 RTLMSKAATVEAVTVAGEGKGIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQ 71
>gi|449454542|ref|XP_004145013.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
gi|449473955|ref|XP_004154030.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 17 TASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAF 76
++ S LKPS++ GQ S P P G++K ++VSP + F
Sbjct: 36 SSKSTLKPSTAAVSGQKS---------------KPAPKKVANPSGGLLKTQKVSPTLAGF 80
Query: 77 VGAPEIPRTQALKLIWAHIKQHNLQ 101
+G EI RT+A+K IW +IK +NLQ
Sbjct: 81 LGQSEIARTEAVKQIWVYIKLNNLQ 105
>gi|294463650|gb|ADE77352.1| unknown [Picea sitchensis]
Length = 129
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A A+ + T + G+ KP +SP M+ F+G E+ R++A+K IW HIK +NLQ
Sbjct: 34 AGAAAESTTKVAKHSGLFKPLSISPVMKKFLGVSEVARSEAIKKIWEHIKANNLQ 88
>gi|357114420|ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K GKR+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 121 KRSDGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQ 170
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 62 GIMKPRRVSPEMEAFVGAPE--IPRTQALKLIWAHIKQHNLQ 101
G+ P ++S ++ F+G E + R+ +K++W +IK++NLQ
Sbjct: 247 GLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQ 288
>gi|163854990|ref|YP_001629288.1| hypothetical protein Bpet0685 [Bordetella petrii DSM 12804]
gi|293603432|ref|ZP_06685857.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|311103989|ref|YP_003976842.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans A8]
gi|421485314|ref|ZP_15932873.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
gi|422322600|ref|ZP_16403640.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|423015696|ref|ZP_17006417.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|163258718|emb|CAP41017.1| conserved hypothetical protein [Bordetella petrii]
gi|292818134|gb|EFF77190.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|310758678|gb|ADP14127.1| SWIB/MDM2 domain protein [Achromobacter xylosoxidans A8]
gi|317402438|gb|EFV83007.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|338781199|gb|EGP45592.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|400196233|gb|EJO29210.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
Length = 92
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 46 LATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+AT S KP T ++ MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 1 MATTS-KPATARKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWEYIKKHNLQ 55
>gi|108711237|gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GKR+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 127 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQ 173
>gi|357114418|ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GKR+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 130 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQ 176
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 62 GIMKPRRVSPEMEAFVGAPE--IPRTQALKLIWAHIKQHNLQ 101
G+ P ++S ++ F+G E + R+ +K++W +IK++NLQ
Sbjct: 253 GLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQ 294
>gi|9280327|dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+PV K+ GI K ++SP++E VGA ++ RT+ +K +WA+I++ +LQ
Sbjct: 91 RPVKAKKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQ 140
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SPE++AF G E+ RT+ +KL+W +IK++NLQ
Sbjct: 251 GFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQ 290
>gi|15230276|ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332642670|gb|AEE76191.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 462
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+PV K+ GI K ++SP++E VGA ++ RT+ +K +WA+I++ +LQ
Sbjct: 105 RPVKAKKRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQ 154
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SPE++AF G E+ RT+ +KL+W +IK++NLQ
Sbjct: 263 GFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQ 302
>gi|297851606|ref|XP_002893684.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339526|gb|EFH69943.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 42 RTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
RT+ AS + VT E +GI K VS ++ +F G E+ R ALK +W ++K HNLQ
Sbjct: 12 RTLMSKAASVEAVTVAGEGKGIFKTLPVSQQLASFAGESELTRGSALKKVWEYVKLHNLQ 71
>gi|89898650|ref|YP_515760.1| swiB complex protein [Chlamydophila felis Fe/C-56]
gi|89332022|dbj|BAE81615.1| swiB complex protein [Chlamydophila felis Fe/C-56]
Length = 87
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M P VS ++EA VG +PRT+ +K +W HIK+HNLQ
Sbjct: 1 MSQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQ 48
>gi|225436221|ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 45 TLATASPKPVTGKREPR--GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW 102
T T +P K PR GI KP VSP + F+G PE R +A+K IW HIK +NLQ
Sbjct: 29 TKKTPAPPRTAAKGPPRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQN 88
Query: 103 KT 104
T
Sbjct: 89 PT 90
>gi|224103519|ref|XP_002313088.1| predicted protein [Populus trichocarpa]
gi|222849496|gb|EEE87043.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+ G K +SP+++A VG PE+ RT+ +K +WA+I+++NLQ
Sbjct: 112 RKRGGFAKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQ 155
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SP+++ VG PE+ RT +K +WA+I++ NLQ
Sbjct: 250 KKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQ 294
>gi|168029051|ref|XP_001767040.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681782|gb|EDQ68206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE++ +G E+PRTQ +K +WA+I++HNLQ
Sbjct: 184 LSPELQTIIGESELPRTQVVKQLWAYIREHNLQ 216
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPE--IPRTQALKLIWAHIKQHNLQ 101
GK + +G + P +S ++ F+ + + R +A K +WA+IK HNLQ
Sbjct: 291 GKSKTQGFLAPYPISDQLAKFLDVEDGKVSRAEAAKRMWAYIKDHNLQ 338
>gi|46204853|ref|ZP_00049390.2| COG5531: SWIB-domain-containing proteins implicated in chromatin
remodeling [Magnetospirillum magnetotacticum MS-1]
Length = 106
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 42 RTVTLATASPKPVTGKR-----EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
+T A+PK T + +P + +P + SPE+ A VG +PR + + +W HIK
Sbjct: 4 KTTEKKAAAPKKETATKAASGTKPNALQQPLKPSPELAAIVGDKPLPRGEVVSKVWEHIK 63
Query: 97 QHNLQ----WKTIV--------FGKWECWIW 115
+HNLQ + IV FGK +C ++
Sbjct: 64 KHNLQNPENKREIVADDKLKKIFGKDKCSMF 94
>gi|449461413|ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SP+++ F+GAPE+ RT+ +K +W HI+++NLQ
Sbjct: 117 GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQ 156
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPE--IPRTQALKLIWAHIKQHNLQ 101
K+ G + P +S + AF+G E +PR+ +K +W +IKQ+NLQ
Sbjct: 245 KKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ 291
>gi|449527809|ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SP+++ F+GAPE+ RT+ +K +W HI+++NLQ
Sbjct: 5 KKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQ 49
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPE--IPRTQALKLIWAHIKQHNLQ 101
K+ G + P +S + AF+G E +PR+ +K +W +IKQ+NLQ
Sbjct: 138 KKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ 184
>gi|239938969|gb|ACS36127.1| SWIB domain-containing protein [Tigriopus japonicus]
Length = 85
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ KP ++SPE+ VG E R++ +K +WA+IK+HNLQ
Sbjct: 10 GLTKPMKLSPELAEVVGKKEASRSECIKQLWAYIKKHNLQ 49
>gi|297830558|ref|XP_002883161.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329001|gb|EFH59420.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 463
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+PV K+ G K ++SP++E VGA ++ RT+ +K +WA+I++++LQ
Sbjct: 105 RPVKAKKRGGGFTKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIRENDLQ 154
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SPE++AF G E+ RT+ +K++W +IK++NLQ
Sbjct: 263 GFAKVCSLSPELQAFTGVTELARTEVVKMLWKYIKENNLQ 302
>gi|195605408|gb|ACG24534.1| SWIb domain-containing protein [Zea mays]
Length = 116
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
R P GI KP VS F G A E+ R++A+KL+WAHIK H LQ
Sbjct: 32 RAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWAHIKAHGLQ 76
>gi|401626231|gb|EJS44187.1| YMR233W [Saccharomyces arboricola H-6]
Length = 226
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 26/29 (89%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++AF+GA E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQAFLGAEELPRTQVVKMIWQYIKEHDLQ 158
>gi|125537942|gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indica Group]
Length = 131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFV-GAPEIPRTQALKLIWAHIKQHNLQ 101
+E RGIM+P VS + F GAPE+ R A+KLIW HIK + LQ
Sbjct: 46 KEKRGIMQPVPVSDALSRFADGAPEMSRAGAVKLIWNHIKANGLQ 90
>gi|115444003|ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|41052552|dbj|BAD07734.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|41053059|dbj|BAD07989.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|113535312|dbj|BAF07695.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|125580680|gb|EAZ21611.1| hypothetical protein OsJ_05241 [Oryza sativa Japonica Group]
gi|215741232|dbj|BAG97727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
+E RGIM+P VS + F G APE+ R A+KLIW HIK + LQ
Sbjct: 46 KEKRGIMQPVPVSDALSRFAGGAPEMSRAGAVKLIWNHIKANGLQ 90
>gi|116792867|gb|ABK26533.1| unknown [Picea sitchensis]
Length = 299
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG P +PRTQ +K +W +I+ +NLQ
Sbjct: 118 PGGLNKICGVSPELQAIVGEPALPRTQIVKQLWTYIRANNLQ 159
>gi|343172024|gb|AEL98716.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ K V+P+++A VG P +PRT+ +K +WA+I++HNLQ
Sbjct: 88 GLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQ 127
>gi|449432287|ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218027 [Cucumis sativus]
Length = 157
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 49 ASPKPVTGKR--EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+P+P K P GI+K +VSP + F+G E R+ A+ IW++IK HNLQ
Sbjct: 63 ATPEPKIKKEMSRPSGILKVTQVSPALSNFLGVSEASRSDAVTQIWSYIKLHNLQ 117
>gi|302806513|ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
gi|300147216|gb|EFJ13881.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
Length = 311
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP ++S +EA VG P+ PR+Q +K +WA+I++HNLQ
Sbjct: 111 KPCQLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQ 147
>gi|343172022|gb|AEL98715.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ K V+P+++A VG P +PRT+ +K +WA+I++HNLQ
Sbjct: 88 GLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQ 127
>gi|300175265|emb|CBK20576.2| unnamed protein product [Blastocystis hominis]
Length = 100
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 44 VTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++L S + ++ MKP R+S E+ AFVG E+PR Q +K+ W++ K+ NLQ
Sbjct: 3 ISLPDTSQEQSHTQKRKNPFMKPLRLSEELAAFVGQSEMPRPQLVKVFWSYFKEKNLQ 60
>gi|225460811|ref|XP_002275854.1| PREDICTED: uncharacterized protein LOC100264067 [Vitis vinifera]
gi|297737516|emb|CBI26717.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++ VG P +PRT+ +K +WA+I+++NLQ
Sbjct: 144 PGGLNKVCGVSPELQTIVGQPALPRTEIVKQLWAYIRRNNLQ 185
>gi|226506384|ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|195616714|gb|ACG30187.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 329
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GK+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 125 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 171
>gi|168032290|ref|XP_001768652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680151|gb|EDQ66590.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP ++A +G E+PRTQ +K +WA+I++HNLQ
Sbjct: 112 LSPLLQAIIGEAELPRTQVVKQLWAYIREHNLQ 144
>gi|302808999|ref|XP_002986193.1| hypothetical protein SELMODRAFT_49450 [Selaginella moellendorffii]
gi|300146052|gb|EFJ12724.1| hypothetical protein SELMODRAFT_49450 [Selaginella moellendorffii]
Length = 71
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP ++S +EA VG P+ PR+Q +K +WA+I++HNLQ
Sbjct: 17 KPCQLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQ 53
>gi|413932976|gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GK+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 124 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 170
>gi|242038013|ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GK+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 122 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 168
>gi|187479362|ref|YP_787387.1| hypothetical protein BAV2891 [Bordetella avium 197N]
gi|115423949|emb|CAJ50501.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 92
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 49 ASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+P R+P MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 2 ATPSKTATTRKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQ 55
>gi|356496496|ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GI K VS E+ F+GAP++ RT+A+K +WA+IK NLQ
Sbjct: 52 GIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQ 91
>gi|356538435|ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GI K VS E+ F+GAP++ RT A+K +WA+IK NLQ
Sbjct: 52 GIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQ 91
>gi|33593966|ref|NP_881610.1| hypothetical protein BP3037 [Bordetella pertussis Tohama I]
gi|33603185|ref|NP_890745.1| hypothetical protein BB4210 [Bordetella bronchiseptica RB50]
gi|384205270|ref|YP_005591009.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|408416929|ref|YP_006627636.1| hypothetical protein BN118_3157 [Bordetella pertussis 18323]
gi|410421667|ref|YP_006902116.1| hypothetical protein BN115_3892 [Bordetella bronchiseptica MO149]
gi|410471648|ref|YP_006894929.1| hypothetical protein BN117_0920 [Bordetella parapertussis Bpp5]
gi|412341485|ref|YP_006970240.1| hypothetical protein BN112_4205 [Bordetella bronchiseptica 253]
gi|427816195|ref|ZP_18983259.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427818864|ref|ZP_18985927.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825292|ref|ZP_18992354.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33564040|emb|CAE43306.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33568816|emb|CAE34574.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383384|gb|AEE68231.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|401779099|emb|CCJ64582.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441758|emb|CCJ48253.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408448962|emb|CCJ60648.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408771319|emb|CCJ56119.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567195|emb|CCN24766.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410569864|emb|CCN17985.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590557|emb|CCN05648.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 92
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 49 ASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+P R+P MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 2 ATPSKTATARKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQ 55
>gi|188582565|ref|YP_001926010.1| SWIB/MDM2 domain-containing protein [Methylobacterium populi BJ001]
gi|179346063|gb|ACB81475.1| SWIB/MDM2 domain protein [Methylobacterium populi BJ001]
Length = 110
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 12/69 (17%)
Query: 59 EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW----KTIV-------- 106
+P + +P + SPE+ A VG +PR + + +W HIK+HNLQ + IV
Sbjct: 30 KPNALQQPLKPSPELAAIVGDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKI 89
Query: 107 FGKWECWIW 115
FGK +C ++
Sbjct: 90 FGKDKCSMF 98
>gi|414873008|tpg|DAA51565.1| TPA: hypothetical protein ZEAMMB73_913346, partial [Zea mays]
Length = 249
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
GK+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ +
Sbjct: 128 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQN 177
>gi|163852543|ref|YP_001640586.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
PA1]
gi|218531380|ref|YP_002422196.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
CM4]
gi|240139877|ref|YP_002964354.1| hypothetical protein MexAM1_META1p3340 [Methylobacterium extorquens
AM1]
gi|254562299|ref|YP_003069394.1| hypothetical protein METDI3911 [Methylobacterium extorquens DM4]
gi|418058520|ref|ZP_12696492.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|163664148|gb|ABY31515.1| SWIB/MDM2 domain protein [Methylobacterium extorquens PA1]
gi|218523683|gb|ACK84268.1| SWIB/MDM2 domain protein [Methylobacterium extorquens CM4]
gi|240009851|gb|ACS41077.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254269577|emb|CAX25547.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
gi|373567944|gb|EHP93901.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 110
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 12/69 (17%)
Query: 59 EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ----WKTI--------V 106
+P + +P + SPE+ A VG +PR + + +W HIK+HNLQ + I +
Sbjct: 30 KPNALQQPLKPSPELAAIVGDNPLPRGEVVSKVWEHIKKHNLQNPENKREILADDKLKKI 89
Query: 107 FGKWECWIW 115
FGK +C ++
Sbjct: 90 FGKDKCSMF 98
>gi|307111870|gb|EFN60104.1| hypothetical protein CHLNCDRAFT_49597 [Chlorella variabilis]
Length = 453
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ----WKTIVF 107
P KR G +SPEM+ F+G +PRTQ +K +W +IK+H LQ +TI+F
Sbjct: 226 PSGRKRRAGGSSLGSFLSPEMQDFLGVERLPRTQVVKRLWEYIKEHGLQDPKDKRTIIF 284
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+R+P G K +S EM A++G P R + K WA+ K+ LQ
Sbjct: 369 ERKPNGFTKECTLSAEMAAWIGKPTASRPEITKFFWAYCKERGLQ 413
>gi|226508644|ref|NP_001147426.1| LOC100281035 [Zea mays]
gi|195611286|gb|ACG27473.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|413932975|gb|AFW67526.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 328
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GK+ G K +SP ++ FVGA E+ RT+ +K +WA+I+++NLQ
Sbjct: 124 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 170
>gi|50294301|ref|XP_449562.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528876|emb|CAG62538.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 68 RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+S ++ F+G E+PRTQ +K +W +IK+HNLQ
Sbjct: 140 RLSDDLYKFLGERELPRTQVVKQVWDYIKEHNLQ 173
>gi|33598274|ref|NP_885917.1| hypothetical protein BPP3764 [Bordetella parapertussis 12822]
gi|33566832|emb|CAE39047.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 92
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 49 ASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+P R+P MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 2 ATPSKTATARKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQ 55
>gi|356537694|ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
Length = 346
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SP+++ F+GAPE+ RT+ +K +WA+I++ NLQ
Sbjct: 144 GFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQ 183
>gi|413925259|gb|AFW65191.1| hypothetical protein ZEAMMB73_350137 [Zea mays]
Length = 802
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 54 VTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
V KR+ P G+ K VSPE++A VG P + RT+ +K +WA+I+++NLQ
Sbjct: 590 VGAKRKGGPGGLNKVCGVSPELQAIVGEPAMARTEIVKQLWAYIRRNNLQ 639
>gi|156847606|ref|XP_001646687.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
gi|156117366|gb|EDO18829.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP+++ F+G E+PRTQ +K +W +IK+H+LQ
Sbjct: 130 LSPKLQEFLGETELPRTQVVKKVWDYIKEHDLQ 162
>gi|452124017|ref|ZP_21936601.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|452127403|ref|ZP_21939984.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
gi|451923247|gb|EMD73388.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|451926683|gb|EMD76813.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
Length = 92
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 49 ASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+P R+P MKP S E+ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 2 ATPSKTATPRKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQ 55
>gi|406986559|gb|EKE07122.1| hypothetical protein ACD_18C00179G0006 [uncultured bacterium]
Length = 91
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++KP +SPE+EA VG +PR+Q +K +W +IK+ NLQ
Sbjct: 8 ALLKPLNLSPELEAVVGPGPMPRSQVVKKLWEYIKEKNLQ 47
>gi|356562640|ref|XP_003549577.1| PREDICTED: uncharacterized protein LOC100804281 [Glycine max]
Length = 329
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ K VSPE++A VG P +PRT+ ++ +WA+IK++NLQ
Sbjct: 142 GLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQ 181
>gi|121594745|ref|YP_986641.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. JS42]
gi|222110642|ref|YP_002552906.1| swib/mdm2 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606825|gb|ABM42565.1| SWIB/MDM2 domain protein [Acidovorax sp. JS42]
gi|221730086|gb|ACM32906.1| SWIB/MDM2 domain protein [Acidovorax ebreus TPSY]
Length = 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 45 TLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T TAS P + MKP SP + A VGA +PRT+ + +W +IK HNLQ
Sbjct: 3 TAKTASAAPAKKRTPNAAFMKPLTPSPALAAVVGATPLPRTEIISKLWVYIKAHNLQ 59
>gi|195629858|gb|ACG36570.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
R P GI KP VS F G A E+ R++A+KL+W HIK H LQ
Sbjct: 35 RAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQ 79
>gi|226510371|ref|NP_001150291.1| LOC100283921 precursor [Zea mays]
gi|195605564|gb|ACG24612.1| SWIb domain-containing protein [Zea mays]
gi|195638128|gb|ACG38532.1| SWIb domain-containing protein [Zea mays]
gi|195653081|gb|ACG46008.1| SWIb domain-containing protein [Zea mays]
gi|223947003|gb|ACN27585.1| unknown [Zea mays]
gi|413935440|gb|AFW69991.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
R P GI KP VS F G A E+ R++A+KL+W HIK H LQ
Sbjct: 35 RAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQ 79
>gi|222640825|gb|EEE68957.1| hypothetical protein OsJ_27851 [Oryza sativa Japonica Group]
Length = 333
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG P + RT+ +K +WA+I+++NLQ
Sbjct: 152 PGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQ 193
>gi|357483029|ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor subunit spp27 [Medicago truncatula]
Length = 361
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 28/33 (84%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP+++ FVGAPE+ RT+ +K +WA+I++ +LQ
Sbjct: 138 LSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQ 170
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+G + P ++S + F+G E+ R+ +K +W +IK +NLQ
Sbjct: 263 KGFLAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQ 303
>gi|320165673|gb|EFW42572.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 612
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
KP VSPE+ A +GA E+PR+Q +K +W IK+ NLQ T
Sbjct: 488 KPVGVSPELAALLGASELPRSQVIKKLWVIIKERNLQDPT 527
>gi|18396594|ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical protein [Arabidopsis thaliana]
gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis thaliana]
gi|28372894|gb|AAO39929.1| At3g03590 [Arabidopsis thaliana]
gi|332640439|gb|AEE73960.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 143
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 56 GKREPR--GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ PR GI K VSP + F+G E RT A+K IW +IK H+LQ
Sbjct: 55 AKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQ 102
>gi|302144157|emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SPE++ F+G PE+ RT+ +K +W HI++ +LQ
Sbjct: 127 KKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQ 171
>gi|147860060|emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SPE++ F+G PE+ RT+ +K +W HI++ +LQ
Sbjct: 132 GFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQ 171
>gi|242082305|ref|XP_002445921.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
gi|241942271|gb|EES15416.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
Length = 427
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++A VG P + RT+ +K +WA+I+++NLQ
Sbjct: 234 PGGLNKVCGVSPELQAIVGEPAMARTEIVKQLWAYIRRNNLQ 275
>gi|410076390|ref|XP_003955777.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
gi|372462360|emb|CCF56642.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
Length = 230
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP+++ +G E+PRTQ +KL+W +IK +NLQ
Sbjct: 129 LSPQLKELLGEDELPRTQVVKLVWDYIKSNNLQ 161
>gi|359480441|ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SPE++ F+G PE+ RT+ +K +W HI++ +LQ
Sbjct: 132 GFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQ 171
>gi|21593643|gb|AAM65610.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 56 GKREPR--GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ PR GI K VSP + F+G E RT A+K IW +IK H+LQ
Sbjct: 55 AKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQ 102
>gi|326491561|dbj|BAJ94258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
RGIM+P VS + F GAP I R+ LK++W ++K ++LQ
Sbjct: 65 RGIMRPVPVSDALSKFGGAPNISRSGVLKIVWDYVKANSLQ 105
>gi|217074210|gb|ACJ85465.1| unknown [Medicago truncatula]
Length = 320
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 28/33 (84%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP+++ FVGAPE+ RT+ +K +WA+I++ +LQ
Sbjct: 138 LSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQ 170
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+G + P ++S + F+G E+ R+ +K +W +IK +NLQ
Sbjct: 263 KGFIAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQ 303
>gi|218201407|gb|EEC83834.1| hypothetical protein OsI_29784 [Oryza sativa Indica Group]
Length = 394
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 47 ATASPKPVTGKRE------------PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAH 94
A SP+P ++ P G+ K VSPE++A VG P + RT+ +K +WA+
Sbjct: 188 AVESPRPAAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAY 247
Query: 95 IKQHNLQ 101
I+++NLQ
Sbjct: 248 IRRNNLQ 254
>gi|225427597|ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|296085458|emb|CBI29190.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 58 REPRGIMKPRRVSPEMEAFVGA-PEIPRTQALKLIWAHIKQHNLQ 101
R+ GI KP VSP++ F+G P+ R+ A+K +W HIK HNLQ
Sbjct: 30 RQGGGITKPVPVSPQLGKFLGGVPQASRSLAIKKVWEHIKLHNLQ 74
>gi|225469998|ref|XP_002278125.1| PREDICTED: uncharacterized protein LOC100267408 [Vitis vinifera]
gi|297741803|emb|CBI33108.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 42 RTVTLATASPK---PVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
++A +PK P KR G+ K VS E++A VG P +PRTQ +K +WA+I+
Sbjct: 137 NAASVAAQAPKESAPAAAKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIR 196
Query: 97 QHNLQ 101
++NLQ
Sbjct: 197 KNNLQ 201
>gi|393759562|ref|ZP_10348375.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162123|gb|EJC62184.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 92
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 46 LATASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+A+ KP T R+P MKP SP + A +G+ +PRT+ K IW +IK+H+LQ
Sbjct: 1 MASTEKKPAT--RKPNAAFMKPLTPSPTLAAVIGSDALPRTEVTKKIWEYIKKHDLQ 55
>gi|115477150|ref|NP_001062171.1| Os08g0502800 [Oryza sativa Japonica Group]
gi|42407772|dbj|BAD08918.1| parathymosin-like [Oryza sativa Japonica Group]
gi|42408131|dbj|BAD09270.1| parathymosin-like [Oryza sativa Japonica Group]
gi|113624140|dbj|BAF24085.1| Os08g0502800 [Oryza sativa Japonica Group]
Length = 406
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 47 ATASPKPVTGKRE------------PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAH 94
A SP+P ++ P G+ K VSPE++A VG P + RT+ +K +WA+
Sbjct: 189 AVESPRPAAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAY 248
Query: 95 IKQHNLQ 101
I+++NLQ
Sbjct: 249 IRRNNLQ 255
>gi|406606814|emb|CCH41850.1| Dynamin-binding protein [Wickerhamomyces ciferrii]
Length = 1011
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 22/95 (23%)
Query: 16 ETASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPR-------- 67
E A+ K S SG R + AS VT ++PR + P
Sbjct: 890 ELAAKLQKESGSG-------------RIKRKSNASSSKVTKPKKPRKPVSPSGNSIAALS 936
Query: 68 -RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP++ F+G ++PRTQ +K +W ++K+++LQ
Sbjct: 937 LNLSPKLAEFLGEQKLPRTQVVKKVWEYVKENDLQ 971
>gi|29839931|ref|NP_829037.1| BAF60b domain-containing protein [Chlamydophila caviae GPIC]
gi|29834278|gb|AAP04915.1| BAF60b domain protein [Chlamydophila caviae GPIC]
Length = 87
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M P ++P++ A VG +PRT+ +K +W HIK++NLQ
Sbjct: 1 MSQKNKNSAFMNPVNITPDLAAIVGEGPMPRTEIVKKVWEHIKKNNLQ 48
>gi|255714771|ref|XP_002553667.1| KLTH0E04246p [Lachancea thermotolerans]
gi|238935049|emb|CAR23230.1| KLTH0E04246p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K ++S E++ VG PE+ RTQ +K +W HIK+ +LQ
Sbjct: 114 KKMQLSDELQKLVGEPEMARTQVVKKVWEHIKEQDLQ 150
>gi|366991355|ref|XP_003675443.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
gi|342301308|emb|CCC69076.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
Length = 227
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ +G E+PRTQ +K++W++IK+HNLQ
Sbjct: 153 LQQLIGEKELPRTQVVKMVWSYIKEHNLQ 181
>gi|255565970|ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis]
Length = 134
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFVGA-PEIPRTQALKLIWAHIKQHNLQ 101
GI+K VSP + F+G PE RT +K IW HIK HNLQ
Sbjct: 53 GILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQ 93
>gi|356522045|ref|XP_003529660.1| PREDICTED: uncharacterized protein LOC100788173 [Glycine max]
Length = 332
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
VSPE++A VG P +PRT+ ++ +WA+IK++NLQ
Sbjct: 152 VSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQ 184
>gi|365758907|gb|EHN00728.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 227
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ F+G E+PRTQ +K+IW +IK+HNLQ
Sbjct: 130 LREFLGTEELPRTQVVKMIWQYIKEHNLQ 158
>gi|361069163|gb|AEW08893.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|361069899|gb|AEW09261.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132487|gb|AFG47113.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132488|gb|AFG47114.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132489|gb|AFG47115.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132490|gb|AFG47116.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132491|gb|AFG47117.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132492|gb|AFG47118.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132493|gb|AFG47119.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132496|gb|AFG47122.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132497|gb|AFG47123.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132498|gb|AFG47124.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132499|gb|AFG47125.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132501|gb|AFG47127.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383175539|gb|AFG71242.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175541|gb|AFG71243.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175547|gb|AFG71246.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175549|gb|AFG71247.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175551|gb|AFG71248.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175553|gb|AFG71249.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175555|gb|AFG71250.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175557|gb|AFG71251.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175559|gb|AFG71252.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175563|gb|AFG71254.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
Length = 81
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQH 98
+PR +SP M+ F+G EIPRT+A+K IW +IK++
Sbjct: 48 QPRPISPAMQKFLGVSEIPRTKAIKKIWEYIKEN 81
>gi|383132494|gb|AFG47120.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132495|gb|AFG47121.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383132500|gb|AFG47126.1| Pinus taeda anonymous locus UMN_1592_02 genomic sequence
gi|383175543|gb|AFG71244.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175545|gb|AFG71245.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
gi|383175561|gb|AFG71253.1| Pinus taeda anonymous locus CL2159Contig1_01 genomic sequence
Length = 81
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQH 98
+PR +SP M+ F+G EIPRT+A+K IW +IK++
Sbjct: 48 QPRPISPAMQKFLGVSEIPRTKAIKKIWEYIKEN 81
>gi|255645561|gb|ACU23275.1| unknown [Glycine max]
Length = 332
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
VSPE++A VG P +PRT+ ++ +WA+IK++NLQ
Sbjct: 152 VSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQ 184
>gi|147816096|emb|CAN72895.1| hypothetical protein VITISV_022315 [Vitis vinifera]
Length = 339
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 42 RTVTLATASPK---PVTGKRE--PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
++A +PK P KR G+ K VS E++A VG P +PRTQ +K +WA+I+
Sbjct: 134 NAASVAAQAPKESAPAAXKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIR 193
Query: 97 QHNLQ 101
++NLQ
Sbjct: 194 KNNLQ 198
>gi|374287848|ref|YP_005034933.1| hypothetical protein BMS_1084 [Bacteriovorax marinus SJ]
gi|301166389|emb|CBW25965.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 115
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 59 EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
E +G+ KP ++ ++ A + A E+PRT+ K +W +IK + LQ KT
Sbjct: 9 EEKGLKKPVKLKADLAAMLNATELPRTEITKKLWDYIKANKLQTKT 54
>gi|323336060|gb|EGA77334.1| Tri1p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|323353173|gb|EGA85473.1| Tri1p [Saccharomyces cerevisiae VL3]
Length = 217
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 121 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 149
>gi|323307663|gb|EGA60928.1| Tri1p [Saccharomyces cerevisiae FostersO]
Length = 226
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|349580524|dbj|GAA25684.1| K7_Ymr233wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 223
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|6323889|ref|NP_013960.1| Tri1p [Saccharomyces cerevisiae S288c]
gi|2497196|sp|Q05024.1|TRI1_YEAST RecName: Full=Protein TRI1
gi|887614|emb|CAA90204.1| unknown [Saccharomyces cerevisiae]
gi|45269842|gb|AAS56301.1| YMR233W [Saccharomyces cerevisiae]
gi|151945938|gb|EDN64170.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408460|gb|EDV11725.1| hypothetical protein SCRG_02128 [Saccharomyces cerevisiae RM11-1a]
gi|207342139|gb|EDZ69997.1| YMR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271577|gb|EEU06619.1| Tri1p [Saccharomyces cerevisiae JAY291]
gi|259148819|emb|CAY82064.1| Tri1p [Saccharomyces cerevisiae EC1118]
gi|285814238|tpg|DAA10133.1| TPA: Tri1p [Saccharomyces cerevisiae S288c]
gi|323332147|gb|EGA73558.1| Tri1p [Saccharomyces cerevisiae AWRI796]
gi|323347044|gb|EGA81320.1| Tri1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297403|gb|EIW08503.1| Tri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 226
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|323303447|gb|EGA57242.1| Tri1p [Saccharomyces cerevisiae FostersB]
Length = 226
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|365763939|gb|EHN05465.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 226
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ F+G+ E+PRTQ +K+IW +IK+H+LQ
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158
>gi|393724614|ref|ZP_10344541.1| hypothetical protein SPAM2_13223 [Sphingomonas sp. PAMC 26605]
Length = 93
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 50 SPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
S P TG GI P S ++ A VGA ++PR++ + +WA+IKQH+LQ
Sbjct: 9 SDAPKTG-----GIFAPITPSADLAAIVGADKLPRSEVISKVWAYIKQHDLQ 55
>gi|424777976|ref|ZP_18204933.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
gi|422887172|gb|EKU29579.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
Length = 92
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 46 LATASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+A+ KP T R+P MKP SP + A +G+ +PRT+ K IW +IK+H+LQ
Sbjct: 1 MASTEKKPAT--RKPNAAFMKPLTPSPTLAAVIGSGALPRTEVTKKIWEYIKKHDLQ 55
>gi|448089569|ref|XP_004196842.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|448093864|ref|XP_004197873.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359378264|emb|CCE84523.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359379295|emb|CCE83492.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 48 TASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T S + + +R + + VSPE++A +G + R Q +K +WA+IK +NLQ
Sbjct: 103 TKSDEKSSERRANNAFFQEKNVSPELQAIIGVEKCSRPQIVKQLWAYIKDNNLQ 156
>gi|297833030|ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
gi|297330237|gb|EFH60656.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 56 GKREPR--GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ PR G+ K VSP + F+G E RT A+K IW +IK H+LQ
Sbjct: 57 AKKTPRSTGLFKVTPVSPVLAQFLGTGETTRTDAIKGIWTYIKSHDLQ 104
>gi|414584929|tpg|DAA35500.1| TPA: hypothetical protein ZEAMMB73_283156 [Zea mays]
Length = 387
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 20 SFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGA 79
SF +P+ G G SP V +AS + G P G+ K +SPE++ VG
Sbjct: 168 SFQQPTP-GAGGTASPTAAPQVAGDNKESASKRKRGG---PGGLNKICAISPELQTIVGE 223
Query: 80 PEIPRTQALKLIWAHIKQHNLQ 101
+ RTQ +K +WA+I+Q+NLQ
Sbjct: 224 TAMSRTQIVKQLWAYIRQNNLQ 245
>gi|359495550|ref|XP_003635018.1| PREDICTED: uncharacterized protein LOC100853436 [Vitis vinifera]
gi|297741808|emb|CBI33113.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G+ K VS E++A VG P +PRTQ +K +WA+I+++NLQ
Sbjct: 159 GLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIRKNNLQ 198
>gi|224029061|gb|ACN33606.1| unknown [Zea mays]
gi|413919845|gb|AFW59777.1| hypothetical protein ZEAMMB73_047514 [Zea mays]
Length = 356
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 48 TASPKPVTGKRE---------PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQH 98
TA+P+ +E P G+ K +SPE++ VG + RTQ +K +WA+I+Q+
Sbjct: 151 TAAPQVAGDNKESSSKRKRGGPGGLNKVCAISPELQTIVGETAMSRTQIVKQLWAYIRQN 210
Query: 99 NLQ 101
NLQ
Sbjct: 211 NLQ 213
>gi|242074688|ref|XP_002447280.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
gi|241938463|gb|EES11608.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
Length = 395
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +WA+I+Q+NLQ
Sbjct: 214 PGGLNKVCAISPELQTIVGETAMSRTQIVKQLWAYIRQNNLQ 255
>gi|356527109|ref|XP_003532156.1| PREDICTED: uncharacterized protein LOC100801960 [Glycine max]
Length = 330
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++ VG P + RT+ +K +WA+I+++NLQ
Sbjct: 145 PGGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQ 186
>gi|50304323|ref|XP_452111.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641243|emb|CAH02504.1| KLLA0B13024p [Kluyveromyces lactis]
Length = 124
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE++ F+ E+PRTQ +K +W +IK+H+LQ
Sbjct: 37 LSPELQEFLKVEEMPRTQVVKSVWDYIKEHDLQ 69
>gi|330444183|ref|YP_004377169.1| hypothetical protein G5S_0481 [Chlamydophila pecorum E58]
gi|328807293|gb|AEB41466.1| BAF60b domain protein [Chlamydophila pecorum E58]
Length = 87
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M+P ++S E+ VG +PRT+ +K +W +IK+HNLQ
Sbjct: 1 MSQKNKNSAFMQPVKISSELAVIVGEGPMPRTEIVKKVWEYIKKHNLQ 48
>gi|357148363|ref|XP_003574734.1| PREDICTED: uncharacterized protein LOC100842878 [Brachypodium
distachyon]
Length = 416
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++ VG P + RT+ +K +WA+I+++NLQ
Sbjct: 224 PGGLNKVCGVSPELQVIVGEPTMARTEIVKQLWAYIRRNNLQ 265
>gi|406984179|gb|EKE05280.1| hypothetical protein ACD_19C00370G0002 [uncultured bacterium]
Length = 85
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+MKP +S ++EA VG +PR+Q +K IW +IK+++LQ
Sbjct: 8 ALMKPMTLSSDLEAVVGKGPMPRSQVVKKIWEYIKKYDLQ 47
>gi|384250769|gb|EIE24248.1| SWIB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 322
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 68 RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++S +++AF+G +PRT+ +K +W +IK+HNLQ
Sbjct: 116 KLSADLQAFLGQESMPRTEVVKKMWEYIKEHNLQ 149
>gi|255639447|gb|ACU20018.1| unknown [Glycine max]
Length = 189
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K VSPE++ VG P + RT+ +K +WA+I+++NLQ
Sbjct: 145 PGGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQ 186
>gi|357166606|ref|XP_003580766.1| PREDICTED: uncharacterized protein LOC100831700 [Brachypodium
distachyon]
Length = 391
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 20 SFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKRE---PRGIMKPRRVSPEMEAF 76
SF +P+ G G SP T A K KR+ P G+ K +SPE++
Sbjct: 167 SFQQPAP-GVGGTSSPTPTPTAGA--QAGGDNKESASKRKRGGPGGLNKVCAISPELQTV 223
Query: 77 VGAPEIPRTQALKLIWAHIKQHNLQ 101
VG + RTQ +K +WA+I+Q+NLQ
Sbjct: 224 VGETAMSRTQIVKQLWAYIRQNNLQ 248
>gi|224081550|ref|XP_002306454.1| predicted protein [Populus trichocarpa]
gi|222855903|gb|EEE93450.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ V G++ G K +SP+++ F+G P + RT+ ++ +W +I++ NLQ
Sbjct: 88 EEVQGRKRGGGFSKLCSLSPQLQEFIGVPHLARTEVVRQLWTYIREKNLQ 137
>gi|367003327|ref|XP_003686397.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
gi|357524698|emb|CCE63963.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
Length = 255
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ +GA E+PRTQ +K +W +IK+HNLQ
Sbjct: 128 LQELLGAEELPRTQVVKQVWDYIKEHNLQ 156
>gi|397594134|gb|EJK56158.1| hypothetical protein THAOC_24008 [Thalassiosira oceanica]
Length = 346
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 56 GKREPR--GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW 102
GK++ R G+ P R+S M A VG P +PR Q + +WA+I+++NLQ+
Sbjct: 221 GKKKKRAPGVQAPWRLSEAMVAVVGKPVLPRPQITQALWAYIRENNLQF 269
>gi|389873151|ref|YP_006380570.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
gi|388538400|gb|AFK63588.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
Length = 91
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 46 LATASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+AT S KP R+P MKP S E+ +G+ +PRT+ K IW +IK+H+LQ
Sbjct: 1 MATTSEKPA---RKPNAAFMKPLTPSAELAQVIGSDPLPRTEVTKKIWEYIKKHDLQ 54
>gi|195626374|gb|ACG35017.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 387
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +WA+I+Q+NLQ
Sbjct: 203 PGGLNKVCAISPELQTIVGETAMSRTQIVKQLWAYIRQNNLQ 244
>gi|319763201|ref|YP_004127138.1| swib/mdm2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|330825395|ref|YP_004388698.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117762|gb|ADV00251.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|329310767|gb|AEB85182.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
Length = 93
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 46 LATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ATA P + MKP SP + A VGA +PRT+ + +W +IK +NLQ
Sbjct: 1 MATAKTAPAKKRTPNAAFMKPLTPSPALAAVVGATPLPRTEIISKLWVYIKANNLQ 56
>gi|239049993|ref|NP_001131941.2| uncharacterized protein LOC100193333 [Zea mays]
gi|238908634|gb|ACF80572.2| unknown [Zea mays]
gi|238908806|gb|ACF86689.2| unknown [Zea mays]
gi|413919846|gb|AFW59778.1| SWIB/MDM2 domain containing protein isoform 1 [Zea mays]
gi|413919847|gb|AFW59779.1| SWIB/MDM2 domain containing protein isoform 2 [Zea mays]
Length = 387
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +WA+I+Q+NLQ
Sbjct: 203 PGGLNKVCAISPELQTIVGETAMSRTQIVKQLWAYIRQNNLQ 244
>gi|424824856|ref|ZP_18249843.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
gi|333409955|gb|EGK68942.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
Length = 87
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M P ++ ++ A VG +PRT+ +K +W +IK+HNLQ
Sbjct: 1 MSQKNKNSAFMNPVNITSDLAAIVGKGPMPRTEIVKKVWDYIKKHNLQ 48
>gi|164659334|ref|XP_001730791.1| hypothetical protein MGL_1790 [Malassezia globosa CBS 7966]
gi|159104689|gb|EDP43577.1| hypothetical protein MGL_1790 [Malassezia globosa CBS 7966]
Length = 202
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 57 KREPRG---IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
KR P + +P R+S +M G E+PR + +K +W +IK HNLQ ++
Sbjct: 122 KRAPNANNPLNRPLRLSSDMAEVCGGSEMPRFEVVKKLWVYIKDHNLQNES 172
>gi|240142382|ref|YP_002966892.1| hypothetical protein MexAM1_META2p0707 [Methylobacterium extorquens
AM1]
gi|418059176|ref|ZP_12697132.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|240012326|gb|ACS43551.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373567298|gb|EHP93271.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 100
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 49 ASPKPVTGKRE----PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+PK +E P G+ +P + S E+ A VG +PR + + +W HIK++NLQ
Sbjct: 6 AAPKKADAPKEAGAKPNGLQQPLKPSAELAAIVGDKPLPRGEVVSKVWEHIKKNNLQ 62
>gi|237746899|ref|ZP_04577379.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378250|gb|EEO28341.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 116
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 56 GKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK 103
KR P MKP S + A +GA +PRT+ K IW +IKQ+NLQ K
Sbjct: 32 AKRTPNAAFMKPVTPSAVLAAVIGATPVPRTEVTKKIWDYIKQNNLQDK 80
>gi|401408355|ref|XP_003883626.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
gi|325118043|emb|CBZ53594.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
Length = 232
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 51 PKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P KR P G+ +P ++ + F+G E R + +K IW +IK+HNLQ
Sbjct: 137 PNEAGKKRGPTGLQRPCDLTGPLATFMGKTEASRVEVVKHIWDYIKRHNLQ 187
>gi|18403898|ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana]
gi|16323472|gb|AAL15230.1| unknown protein [Arabidopsis thaliana]
gi|20197355|gb|AAM15040.1| Expressed protein [Arabidopsis thaliana]
gi|20197527|gb|AAM15113.1| Expressed protein [Arabidopsis thaliana]
gi|21618090|gb|AAM67140.1| unknown [Arabidopsis thaliana]
gi|26451839|dbj|BAC43012.1| unknown protein [Arabidopsis thaliana]
gi|330254033|gb|AEC09127.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 109
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A +S TG R+ GI+K VS + F+G E+ RT A+K IW +IK +NLQ
Sbjct: 15 AASSTGAKTG-RQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQ 68
>gi|444316078|ref|XP_004178696.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
gi|387511736|emb|CCH59177.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
Length = 232
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S M+ F+G +PRTQ +K +W +IK+H+LQ
Sbjct: 133 LSDSMQEFLGEEALPRTQVVKRVWDYIKEHDLQ 165
>gi|395493643|ref|ZP_10425222.1| hypothetical protein SPAM26_17494 [Sphingomonas sp. PAMC 26617]
gi|404253972|ref|ZP_10957940.1| hypothetical protein SPAM266_11940 [Sphingomonas sp. PAMC 26621]
Length = 93
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 50 SPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
S P TG GI P + SPE+ A VG +PR++ + +W +IK+H+LQ
Sbjct: 9 SDAPKTG-----GIFAPIQPSPELGAIVGNDRLPRSEVISKVWEYIKKHDLQ 55
>gi|393718831|ref|ZP_10338758.1| SWIB/MDM2 domain-containing protein [Sphingomonas echinoides ATCC
14820]
Length = 93
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 50 SPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
S P TG GI P S E+ A VG ++PR++ + +WA+IK HNLQ
Sbjct: 9 SDAPKTG-----GIFAPITPSAELGAIVGTDKLPRSEVISKVWAYIKAHNLQ 55
>gi|302306522|ref|NP_982932.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|299788556|gb|AAS50756.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|374106135|gb|AEY95045.1| FABL015Cp [Ashbya gossypii FDAG1]
Length = 204
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P ++S ++ +G ++PRTQ +K +W +IKQH LQ
Sbjct: 108 MRPVQLSEPLQRLLGEEQLPRTQVVKAVWDYIKQHQLQ 145
>gi|297823353|ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325398|gb|EFH55818.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+ GI+K VS + F+G E+ RT A+K IW +IK +NLQ
Sbjct: 28 RQGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQ 71
>gi|226228476|ref|YP_002762582.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
gi|226091667|dbj|BAH40112.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
MK S ++ A VG +PRT+ +K +WA+IK++NLQ KT
Sbjct: 63 AFMKALTPSSDLAAIVGDKPLPRTEVVKKLWAYIKKNNLQDKT 105
>gi|170739254|ref|YP_001767909.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. 4-46]
gi|168193528|gb|ACA15475.1| SWIB/MDM2 domain protein [Methylobacterium sp. 4-46]
Length = 120
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
A+PK G +P + KP + SPE+ A VG IPR + + +W +I+ H+LQ
Sbjct: 34 AAPK---GGDKPNALQKPLQPSPELGAIVGTKPIPRGEVVSKVWDYIRTHSLQ 83
>gi|328769562|gb|EGF79606.1| hypothetical protein BATDEDRAFT_89688 [Batrachochytrium
dendrobatidis JAM81]
Length = 321
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 63 IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ +PR +SPE + VG E+ R QALK IW +IK LQ
Sbjct: 230 LNEPRILSPEFASIVGVSELSRAQALKEIWLYIKDKKLQ 268
>gi|359359030|gb|AEV40937.1| SWIB/MDM2 domain-containing protein [Oryza punctata]
Length = 391
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +W +I+Q+NLQ
Sbjct: 207 PGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQ 248
>gi|359359081|gb|AEV40987.1| SWIB/MDM2 domain-containing protein [Oryza minuta]
Length = 389
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +W +I+Q+NLQ
Sbjct: 205 PGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQ 246
>gi|348690935|gb|EGZ30749.1| hypothetical protein PHYSODRAFT_475850 [Phytophthora sojae]
Length = 383
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ VGA + R Q +K +WA+I++HNLQ
Sbjct: 146 LSPELAQVVGAETMARPQVVKALWAYIREHNLQ 178
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GK++ VSPE+ + +G + R + +K +WA+I +HNLQ
Sbjct: 266 GKKKANPFYTELAVSPELASLLGRDRMARPEIVKALWAYIHEHNLQ 311
>gi|237833393|ref|XP_002365994.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|211963658|gb|EEA98853.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|221508962|gb|EEE34531.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
VEG]
Length = 254
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR P G+ +P + + F+G E R + +K IW +IK+HNLQ
Sbjct: 165 KRGPTGLQRPCDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQ 209
>gi|221488456|gb|EEE26670.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
GT1]
Length = 254
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR P G+ +P + + F+G E R + +K IW +IK+HNLQ
Sbjct: 165 KRGPTGLQRPCDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQ 209
>gi|125980237|ref|XP_001354143.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|195173955|ref|XP_002027749.1| GL18416 [Drosophila persimilis]
gi|54642447|gb|EAL31195.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|194114711|gb|EDW36754.1| GL18416 [Drosophila persimilis]
Length = 246
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +GAP +PR + +K +WA IK+ +L
Sbjct: 165 RKSTGFTRAYNLSPELSALMGAPSLPRHEVVKKVWAIIKERDL 207
>gi|338731806|ref|YP_004662925.1| hypothetical protein SNE_B24300 [Simkania negevensis Z]
gi|336481189|emb|CCB87789.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 85
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ MKP VS E+ +G+ +PRTQ K IW +IK+H Q
Sbjct: 2 AKKNNESFMKPMTVSKELSEVIGSGPMPRTQVTKKIWDYIKKHKRQ 47
>gi|125591970|gb|EAZ32320.1| hypothetical protein OsJ_16531 [Oryza sativa Japonica Group]
Length = 388
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +W +I+Q+NLQ
Sbjct: 204 PGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQ 245
>gi|218195772|gb|EEC78199.1| hypothetical protein OsI_17819 [Oryza sativa Indica Group]
Length = 389
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +W +I+Q+NLQ
Sbjct: 205 PGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQ 246
>gi|15835359|ref|NP_297118.1| hypothetical protein TC0745 [Chlamydia muridarum Nigg]
gi|270285535|ref|ZP_06194929.1| hypothetical protein CmurN_03778 [Chlamydia muridarum Nigg]
gi|270289546|ref|ZP_06195848.1| hypothetical protein CmurW_03878 [Chlamydia muridarum Weiss]
gi|301336932|ref|ZP_07225134.1| hypothetical protein CmurM_03835 [Chlamydia muridarum MopnTet14]
gi|7190773|gb|AAF39552.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 86
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P VS ++ A VG +PRT+ +K IW +IKQ+ LQ
Sbjct: 10 MQPVNVSSDLAAIVGTGPMPRTEIIKKIWDYIKQNKLQ 47
>gi|406933255|gb|EKD67963.1| hypothetical protein ACD_48C00134G0001 [uncultured bacterium]
Length = 90
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+MKP +SPE+ A +GA + R Q +K +W +IK NLQ
Sbjct: 8 ALMKPLTLSPELAAVIGAGPLARGQVMKKLWEYIKGKNLQ 47
>gi|383640982|ref|ZP_09953388.1| SWIB/MDM2 domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 85
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GI KP SPE+ VG ++PR++ + +W +IK++NLQ
Sbjct: 9 GIAKPVTPSPELAKIVGTADLPRSEIVSKVWEYIKKNNLQ 48
>gi|256423726|ref|YP_003124379.1| SWIB/MDM2 domain-containing protein [Chitinophaga pinensis DSM
2588]
gi|256038634|gb|ACU62178.1| SWIB/MDM2 domain protein [Chitinophaga pinensis DSM 2588]
Length = 106
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+G+ P S ++ A +G+ +PRT+ K IW +IK+HNLQ
Sbjct: 28 KGLKAPLTPSADLAAVIGSDPLPRTEITKKIWDYIKEHNLQ 68
>gi|68473744|ref|XP_718975.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
gi|68473953|ref|XP_718873.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440666|gb|EAK99969.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440772|gb|EAL00074.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
Length = 136
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ +G + R Q +KL+WA+IK HNLQ
Sbjct: 59 LSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQ 91
>gi|356496860|ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Glycine max]
Length = 331
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SP+++ F+ APE+ RT+ +K +W +I++ NLQ
Sbjct: 129 GFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQ 168
>gi|115461154|ref|NP_001054177.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|32488657|emb|CAE03584.1| OSJNBa0087O24.7 [Oryza sativa Japonica Group]
gi|113565748|dbj|BAF16091.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|116308843|emb|CAH65980.1| H1005F08.9 [Oryza sativa Indica Group]
Length = 336
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P G+ K +SPE++ VG + RTQ +K +W +I+Q+NLQ
Sbjct: 152 PGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQ 193
>gi|356496858|ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G K +SP+++ F+ APE+ RT+ +K +W +I++ NLQ
Sbjct: 135 GFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQ 174
>gi|300122871|emb|CBK23878.2| unnamed protein product [Blastocystis hominis]
Length = 876
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K +VSPE++A +G R+ LK IW +I++H LQ
Sbjct: 751 KSYKVSPELQAVIGCTHCTRSDCLKKIWQYIREHQLQ 787
>gi|294874755|ref|XP_002767082.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868510|gb|EEQ99799.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 154
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
+SPE+ VGAP+ R K +W +IK HNLQ +T
Sbjct: 74 LSPELSTIVGAPKASRVDITKKLWGYIKSHNLQEET 109
>gi|238879408|gb|EEQ43046.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 172
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ +G + R Q +KL+WA+IK HNLQ
Sbjct: 59 LSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQ 91
>gi|187251157|ref|YP_001875639.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
gi|186971317|gb|ACC98302.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
Length = 84
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M P S E+ A VG+ +PRT+ +K +W +IK+HNLQ
Sbjct: 9 MAPLTPSAELAAIVGSNPLPRTEVVKKMWDYIKKHNLQ 46
>gi|255561659|ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor, putative [Ricinus communis]
Length = 614
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SP+++ F G E+ RT+ +K +W +I+++NLQ
Sbjct: 410 KKRGGGFTKLCSLSPQLQEFTGESELARTEVVKKLWIYIRENNLQ 454
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 26/33 (78%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP++ FVG E+ RT+ +K +WA+I++++LQ
Sbjct: 125 LSPQLHKFVGVSELARTEVVKKLWAYIRENDLQ 157
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K+ G K +SP+++ F+G + RT+ +K +W +I+++NLQ
Sbjct: 261 KKRGGGFTKLCSLSPQLQEFIGESKSARTEVVKKLWVYIRENNLQ 305
>gi|338734173|ref|YP_004672646.1| DNA topoisomerase 1 [Simkania negevensis Z]
gi|336483556|emb|CCB90155.1| DNA topoisomerase 1 [Simkania negevensis Z]
Length = 840
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K G + G + +++S E++A VG E+ R + K IW +IK HNLQ
Sbjct: 753 KTKKGGKRAGGSGRAKKLSKELQAVVGEKELTRGEVTKKIWEYIKSHNLQ 802
>gi|255562647|ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ + GK+ G K +SP+++ G P++ RT+ +K +W+HI++ LQ
Sbjct: 110 SNEQKNEGKKRGGGFSKLCSLSPQLQELTGVPQLARTEVVKQLWSHIREKKLQ 162
>gi|296137220|ref|YP_003644462.1| SWIB/MDM2 domain-containing protein [Thiomonas intermedia K12]
gi|410695094|ref|YP_003625716.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|294341519|emb|CAZ89936.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|295797342|gb|ADG32132.1| SWIB/MDM2 domain protein [Thiomonas intermedia K12]
Length = 99
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MKP S + A VG +PRT+ +K +W +IK+HNLQ
Sbjct: 18 RQPSAAFMKPLTPSAHLAAVVGTTPLPRTEVVKKLWEYIKKHNLQ 62
>gi|170058412|ref|XP_001864911.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877491|gb|EDS40874.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G +P +SPE+ A GA +PR + +K +WA IK+ NL
Sbjct: 174 GYTRPYNLSPELAAICGAEALPRHEVVKKVWAIIKERNL 212
>gi|289740333|gb|ADD18914.1| RNA polymerase I transcription factor subunit Spp27 [Glossina
morsitans morsitans]
Length = 239
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +GA +PR + +K +WA IK+ NL
Sbjct: 158 RKSTGFTRSYNLSPELSALMGADALPRHEVVKKVWAIIKERNL 200
>gi|121605272|ref|YP_982601.1| SWIB/MDM2 domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120594241|gb|ABM37680.1| SWIB/MDM2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 134
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 57 KREPR-GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR P MK +SPE+ A VG +PRT+ + +W +IK +NLQ
Sbjct: 52 KRTPNPAFMKALTLSPELSAVVGDQPLPRTEIVSKLWVYIKANNLQ 97
>gi|241948081|ref|XP_002416763.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
gi|223640101|emb|CAX44347.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
Length = 254
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ +G + R Q +KL+WA+IK HNLQ
Sbjct: 139 LSPELANVIGVDKCSRPQVVKLLWAYIKDHNLQ 171
>gi|301119559|ref|XP_002907507.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106019|gb|EEY64071.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
RG +SPE+ VGA + R Q +K +WA+I++H+LQ
Sbjct: 138 RGFNAQLSLSPELAQVVGAETMARPQVVKALWAYIREHDLQ 178
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ + G+ + R Q +K +WA+I +HNLQ
Sbjct: 278 LSPELASLTGSDRMARPQIVKALWAYIHEHNLQ 310
>gi|406987616|gb|EKE07914.1| hypothetical protein ACD_17C00463G0001, partial [uncultured
bacterium]
Length = 497
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 37 HLRT--VRTVTLATASPKPVTGKREPRGIMKPR-RVSPEMEAFVGAPEIPRTQALKLIWA 93
HL+T ++ S K +T +++ R + +P + S E++A VG EI R +A K IW
Sbjct: 392 HLKTPYIKKARRGKGSKKSMTQEKKKRTMTQPTYKASKELQAVVGQGEITRPEATKKIWD 451
Query: 94 HIKQHNLQ 101
+IK +LQ
Sbjct: 452 YIKAKHLQ 459
>gi|166154674|ref|YP_001654792.1| hypothetical protein CTL0720 [Chlamydia trachomatis 434/Bu]
gi|166155549|ref|YP_001653804.1| hypothetical protein CTLon_0716 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335944|ref|ZP_07224188.1| hypothetical protein CtraL_03925 [Chlamydia trachomatis L2tet1]
gi|339626139|ref|YP_004717618.1| SWIB/MDM2 domain-containing protein [Chlamydia trachomatis L2c]
gi|165930662|emb|CAP04159.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931537|emb|CAP07113.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460482|gb|AEJ76985.1| SWIB/MDM2 domain protein [Chlamydia trachomatis L2c]
gi|440526269|emb|CCP51753.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/8200/07]
gi|440536094|emb|CCP61607.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/795]
gi|440540547|emb|CCP66061.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2/25667R]
gi|440542322|emb|CCP67836.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440543213|emb|CCP68727.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada2]
gi|440544104|emb|CCP69618.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/LST]
gi|440544994|emb|CCP70508.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams1]
gi|440545884|emb|CCP71398.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/CV204]
gi|440914146|emb|CCP90563.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams2]
gi|440915036|emb|CCP91453.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams3]
gi|440915927|emb|CCP92344.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada1]
gi|440916822|emb|CCP93239.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917712|emb|CCP94129.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams5]
Length = 86
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P VS ++ A VGA +PRT+ +K +W +IK+++LQ
Sbjct: 10 MQPVNVSADLAAIVGAGPMPRTEIIKKMWDYIKENSLQ 47
>gi|225709960|gb|ACO10826.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 52 KPVTGKREPRG------IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP KR+ +G KP +S ++ A VG PR + +K +WA+IK++NLQ
Sbjct: 144 KPTKAKRKSKGGGGGNGFTKPLNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQ 199
>gi|440536987|emb|CCP62501.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/440/LN]
gi|440537876|emb|CCP63390.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538766|emb|CCP64280.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/115]
gi|440539655|emb|CCP65169.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/224]
gi|440541435|emb|CCP66949.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L3/404/LN]
Length = 86
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P VS ++ A VGA +PRT+ +K +W +IK++ LQ
Sbjct: 10 MQPVNVSADLAAIVGAGPMPRTEIIKKMWDYIKENGLQ 47
>gi|255348833|ref|ZP_05380840.1| hypothetical protein Ctra70_02450 [Chlamydia trachomatis 70]
gi|255503373|ref|ZP_05381763.1| hypothetical protein Ctra7_02460 [Chlamydia trachomatis 70s]
gi|255507051|ref|ZP_05382690.1| hypothetical protein CtraD_02435 [Chlamydia trachomatis D(s)2923]
gi|385241838|ref|YP_005809678.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|385245445|ref|YP_005814268.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|386262817|ref|YP_005816096.1| hypothetical protein SW2_4691 [Chlamydia trachomatis Sweden2]
gi|389858156|ref|YP_006360398.1| hypothetical protein FSW4_4691 [Chlamydia trachomatis F/SW4]
gi|389859032|ref|YP_006361273.1| hypothetical protein ESW3_4691 [Chlamydia trachomatis E/SW3]
gi|389859908|ref|YP_006362148.1| hypothetical protein FSW5_4691 [Chlamydia trachomatis F/SW5]
gi|289525505|emb|CBJ14982.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435061|gb|ADH17239.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|296438781|gb|ADH20934.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|380249228|emb|CCE14520.1| conserved hypothetical protein [Chlamydia trachomatis F/SW5]
gi|380250103|emb|CCE13631.1| conserved hypothetical protein [Chlamydia trachomatis F/SW4]
gi|380250981|emb|CCE12742.1| conserved hypothetical protein [Chlamydia trachomatis E/SW3]
gi|440527167|emb|CCP52651.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD1]
gi|440529841|emb|CCP55325.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE4]
gi|440530740|emb|CCP56224.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE8]
gi|440531631|emb|CCP57141.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis F/SotonF3]
gi|440535208|emb|CCP60718.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/Bour]
Length = 86
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P VS ++ A VGA +PRT+ +K +W +IK+++LQ
Sbjct: 10 MQPVNVSADLAAIVGAGPMPRTEIIKKMWDYIKKNSLQ 47
>gi|332186843|ref|ZP_08388585.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
gi|332013176|gb|EGI55239.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
Length = 86
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 12/66 (18%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW----KTI--------VFGK 109
GI P + S E+ A VG ++PR+Q + +W +IK +NLQ + I VFGK
Sbjct: 9 GIHAPVQPSEELGAIVGNEKLPRSQVISKVWDYIKANNLQNPENKREILADDKLKKVFGK 68
Query: 110 WECWIW 115
+C ++
Sbjct: 69 DKCTMF 74
>gi|225165980|ref|ZP_03727735.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
gi|224799776|gb|EEG18250.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
Length = 90
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKTI 105
R+P MKP + + A VGA +PRT+ K +W +IK++NLQ K +
Sbjct: 7 RKPNAAFMKPVQPDDVLAAVVGAKPLPRTELTKKLWEYIKKNNLQDKKV 55
>gi|42522857|ref|NP_968237.1| hypothetical protein Bd1337 [Bdellovibrio bacteriovorus HD100]
gi|39574053|emb|CAE79230.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 140
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MK S + A VGA +PRT+ +K +WA+IK++NLQ
Sbjct: 58 RKPNAAFMKALTPSAALAAVVGASPLPRTEVVKKLWAYIKKNNLQ 102
>gi|444916606|ref|ZP_21236719.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
gi|444711891|gb|ELW52824.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
Length = 115
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 56 GKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
GKR+P MK SP + VG+ +PRT + IW +IK++NLQ
Sbjct: 31 GKRKPNAAFMKEMTPSPALAEIVGSKALPRTAVVSKIWEYIKKNNLQ 77
>gi|15605187|ref|NP_219973.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76789196|ref|YP_328282.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|237802888|ref|YP_002888082.1| hypothetical protein JALI_4621 [Chlamydia trachomatis B/Jali20/OT]
gi|237804810|ref|YP_002888964.1| hypothetical protein CTB_4621 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311272|ref|ZP_05353842.1| hypothetical protein Ctra62_02400 [Chlamydia trachomatis 6276]
gi|255317574|ref|ZP_05358820.1| hypothetical protein Ctra6_02395 [Chlamydia trachomatis 6276s]
gi|376282469|ref|YP_005156295.1| hypothetical protein CTR_4621 [Chlamydia trachomatis A2497]
gi|385239983|ref|YP_005807825.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|385240907|ref|YP_005808748.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|385242761|ref|YP_005810600.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|385243668|ref|YP_005811514.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|385244548|ref|YP_005812392.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|385246370|ref|YP_005815192.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|385270160|ref|YP_005813320.1| hypothetical protein [Chlamydia trachomatis A2497]
gi|3328894|gb|AAC68060.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167726|gb|AAX50734.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|231273110|emb|CAX10023.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274122|emb|CAX10916.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
gi|296435988|gb|ADH18162.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|296436915|gb|ADH19085.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|296437849|gb|ADH20010.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|297140349|gb|ADH97107.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|297748591|gb|ADI51137.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|297749471|gb|ADI52149.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|347975300|gb|AEP35321.1| hypothetical protein CTO_0503 [Chlamydia trachomatis A2497]
gi|371908499|emb|CAX09129.1| conserved hypothetical protein [Chlamydia trachomatis A2497]
gi|438690393|emb|CCP49650.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/7249]
gi|438691478|emb|CCP48752.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/5291]
gi|438692851|emb|CCP47853.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/363]
gi|440525382|emb|CCP50633.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis K/SotonK1]
gi|440528059|emb|CCP53543.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD5]
gi|440528949|emb|CCP54433.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD6]
gi|440532524|emb|CCP58034.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/SotonG1]
gi|440533417|emb|CCP58927.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534311|emb|CCP59821.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa3]
Length = 86
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P VS ++ A VGA +PRT+ +K +W +IK++ LQ
Sbjct: 10 MQPVNVSADLAAIVGAGPMPRTEIIKKMWDYIKKNGLQ 47
>gi|195015029|ref|XP_001984125.1| GH16267 [Drosophila grimshawi]
gi|193897607|gb|EDV96473.1| GH16267 [Drosophila grimshawi]
Length = 254
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +GA +PR + +K +WA IK+ +L
Sbjct: 172 RKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDL 214
>gi|426403308|ref|YP_007022279.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859976|gb|AFY01012.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 139
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MK S + A VGA +PRT+ +K +WA+IK++NLQ
Sbjct: 57 RKPNAAFMKALTPSAALAAVVGASPLPRTEVVKKLWAYIKKNNLQ 101
>gi|15618487|ref|NP_224773.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|15836109|ref|NP_300633.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|16752461|ref|NP_444723.1| hypothetical protein CP0171 [Chlamydophila pneumoniae AR39]
gi|33241932|ref|NP_876873.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|384449161|ref|YP_005661763.1| SWIB/MDM2 domain-containing protein [Chlamydophila pneumoniae
LPCoLN]
gi|4376870|gb|AAD18716.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|7189103|gb|AAF38047.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978949|dbj|BAA98784.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|33236442|gb|AAP98530.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|269303455|gb|ACZ33555.1| SWIB/MDM2 domain protein [Chlamydophila pneumoniae LPCoLN]
Length = 87
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M P +S ++ VG +PRT+ +K +W +IK+HN Q
Sbjct: 1 MSQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQ 48
>gi|116788399|gb|ABK24867.1| unknown [Picea sitchensis]
Length = 297
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 26/33 (78%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+++ +G E+ RTQ +K +W +I++++LQ
Sbjct: 132 LSPELQSVLGVSELSRTQVVKQLWVYIRENDLQ 164
>gi|62184807|ref|YP_219592.1| hypothetical protein CAB162 [Chlamydophila abortus S26/3]
gi|329942483|ref|ZP_08291293.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|332287120|ref|YP_004422021.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 6BC]
gi|384450266|ref|YP_005662866.1| hypothetical protein G5O_0190 [Chlamydophila psittaci 6BC]
gi|384451271|ref|YP_005663869.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 01DC11]
gi|384452247|ref|YP_005664844.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 08DC60]
gi|384453221|ref|YP_005665817.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci C19/98]
gi|384454199|ref|YP_005666794.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 02DC15]
gi|392376373|ref|YP_004064151.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|406591985|ref|YP_006739165.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci CP3]
gi|406593096|ref|YP_006740275.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci NJ1]
gi|406594712|ref|YP_006741317.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci MN]
gi|407453655|ref|YP_006732763.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci 84/55]
gi|407454987|ref|YP_006733878.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci GR9]
gi|407456356|ref|YP_006734929.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci VS225]
gi|407457720|ref|YP_006736025.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WS/RT/E30]
gi|407458967|ref|YP_006737070.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci M56]
gi|407460337|ref|YP_006738112.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WC]
gi|410858150|ref|YP_006974090.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449070814|ref|YP_007437894.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
gi|62147874|emb|CAH63620.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|313847716|emb|CBY16706.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325507161|gb|ADZ18799.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 6BC]
gi|328815393|gb|EGF85381.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|328914360|gb|AEB55193.1| BAF60b domain protein [Chlamydophila psittaci 6BC]
gi|334692002|gb|AEG85221.1| SWIB/MDM2 domain protein [Chlamydophila psittaci C19/98]
gi|334692981|gb|AEG86199.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 01DC11]
gi|334693956|gb|AEG87173.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 02DC15]
gi|334694936|gb|AEG88152.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 08DC60]
gi|405780414|gb|AFS19164.1| SWIB/MDM2 domain protein [Chlamydia psittaci 84/55]
gi|405781530|gb|AFS20279.1| SWIB/MDM2 domain protein [Chlamydia psittaci GR9]
gi|405783144|gb|AFS21892.1| SWIB/MDM2 domain protein [Chlamydia psittaci MN]
gi|405783617|gb|AFS22364.1| SWIB/MDM2 domain protein [Chlamydia psittaci VS225]
gi|405785392|gb|AFS24138.1| SWIB/MDM2 domain protein [Chlamydia psittaci WS/RT/E30]
gi|405785615|gb|AFS24360.1| SWIB/MDM2 domain protein [Chlamydia psittaci M56]
gi|405787199|gb|AFS25943.1| SWIB/MDM2 domain protein [Chlamydia psittaci WC]
gi|405787857|gb|AFS26600.1| SWIB/MDM2 domain protein [Chlamydia psittaci CP3]
gi|405788968|gb|AFS27710.1| SWIB/MDM2 domain protein [Chlamydia psittaci NJ1]
gi|410811045|emb|CCO01688.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449039322|gb|AGE74746.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
Length = 87
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ K + M P ++ ++ A VG +PRT+ +K +W +IK+ NLQ
Sbjct: 1 MSQKNKNSAFMNPVNITSDLAAIVGKGPMPRTEIVKKVWDYIKKRNLQ 48
>gi|374288756|ref|YP_005035841.1| putative histone protein [Bacteriovorax marinus SJ]
gi|301167297|emb|CBW26879.1| putative histone protein [Bacteriovorax marinus SJ]
Length = 235
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MK S ++ A +G +PRT+A+K +W +IK++NLQ
Sbjct: 154 RKPNAAFMKAMTPSADLAAVIGDKAVPRTEAVKKMWDYIKKNNLQ 198
>gi|388569327|ref|ZP_10155726.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
gi|388263453|gb|EIK89044.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
Length = 85
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
SPE+ A +G+ PRT+ +KL+W +IK +NLQ
Sbjct: 17 SPELAAVIGSTPQPRTEVVKLMWEYIKANNLQ 48
>gi|237749053|ref|ZP_04579533.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229380415|gb|EEO30506.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 128
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK 103
MKP + + A VGA +PRT+ K +W +IK++NLQ K
Sbjct: 51 AFMKPVTPTAMLAAIVGAAPLPRTEVTKKVWDYIKKYNLQDK 92
>gi|225709694|gb|ACO10693.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 52 KPVTGKREPRG------IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP KR+ +G KP +S ++ A VG PR + +K +WA+IK++NLQ
Sbjct: 144 KPTKAKRKSKGGGGGNGFTKPPNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQ 199
>gi|389694036|ref|ZP_10182130.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388587422|gb|EIM27715.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 102
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 59 EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+P + KP + S E+ A VG+ +PR + + IW +IK++NLQ
Sbjct: 23 KPNALQKPLQPSKELAAIVGSDPLPRGEVVSKIWDYIKKNNLQ 65
>gi|406987979|gb|EKE08139.1| hypothetical protein ACD_17C00325G0001 [uncultured bacterium]
Length = 86
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K++ M+P + S E+ A VG +PRT+ K +WA+IK+++LQ
Sbjct: 4 KQKNSKFMQPMKPSKELAAVVGDGPMPRTEVTKKLWAYIKKNDLQ 48
>gi|157133783|ref|XP_001663011.1| hypothetical protein AaeL_AAEL012865 [Aedes aegypti]
gi|108870706|gb|EAT34931.1| AAEL012865-PA [Aedes aegypti]
Length = 271
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G +P +SPE+ A GA +PR + +K +W IK+ NL
Sbjct: 194 GFTRPYNLSPELAAICGADALPRHEVVKKVWTIIKERNL 232
>gi|398835468|ref|ZP_10592830.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
gi|398216254|gb|EJN02807.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
Length = 157
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP S + VGA +PRT+ K +W +IK+HNLQ
Sbjct: 80 AFMKPLTPSAALGEVVGAKPLPRTEVTKKVWEYIKKHNLQ 119
>gi|389689629|ref|ZP_10178847.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590119|gb|EIM30405.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 86
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+MKP + S E+ A VG+ +PRT+ + +W +IK +NLQ
Sbjct: 9 ALMKPVQPSNELVAVVGSSPLPRTEVVSKVWDYIKSNNLQ 48
>gi|195377146|ref|XP_002047353.1| GJ11979 [Drosophila virilis]
gi|194154511|gb|EDW69695.1| GJ11979 [Drosophila virilis]
Length = 247
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +GA +PR + +K +WA IK+ +L
Sbjct: 166 RKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDL 208
>gi|19075845|ref|NP_588345.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe 972h-]
gi|74626867|sp|O74503.1|UAF30_SCHPO RecName: Full=Upstream activation factor subunit spp27; AltName:
Full=Upstream activation factor 27 KDa subunit;
Short=p27; AltName: Full=Upstream activation factor 30
KDa subunit; Short=p30; AltName: Full=Upstream
activation factor subunit uaf30
gi|3581917|emb|CAA20856.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe]
Length = 233
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 63 IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ KP ++SP++ F+G ++ R Q +K +W +IK H+LQ
Sbjct: 117 LNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQ 155
>gi|195126905|ref|XP_002007909.1| GI13202 [Drosophila mojavensis]
gi|193919518|gb|EDW18385.1| GI13202 [Drosophila mojavensis]
Length = 245
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +GA +PR + +K +WA IK+ +L
Sbjct: 164 RKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDL 206
>gi|241766425|ref|ZP_04764300.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
gi|241363386|gb|EER58892.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
Length = 110
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
MK SP + A VG+ +PRT+ + +W +IK HNLQ T
Sbjct: 34 AFMKALTPSPALAAVVGSAPLPRTEIISKLWVYIKAHNLQDAT 76
>gi|170749922|ref|YP_001756182.1| SWIB/MDM2 domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656444|gb|ACB25499.1| SWIB/MDM2 domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 119
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 59 EPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW----KTI--------V 106
+P + +P + S E+ A VG +PR + + +W +IK++NLQ + I V
Sbjct: 39 KPNALQQPLKPSAELGAIVGTSPLPRGEVVSKVWDYIKKNNLQNPQNKREIVADDKLKKV 98
Query: 107 FGKWECWIW 115
FGK +C ++
Sbjct: 99 FGKDKCSMF 107
>gi|159488925|ref|XP_001702451.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
gi|158271119|gb|EDO96946.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
Length = 275
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S ++AF+G +PRTQ +K +W +IK +NLQ
Sbjct: 87 LSEPLQAFLGVESLPRTQVVKRLWEYIKANNLQ 119
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KR+ KP R+SPE+ A G + R + WA++K+ L+
Sbjct: 192 KRKKNAFTKPVRLSPELAALTGKESMGRPEVTSFFWAYVKEKGLK 236
>gi|94496660|ref|ZP_01303236.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
gi|94424020|gb|EAT09045.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
Length = 113
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
SPE+ VG ++PR++ + +W +IK+H+LQ
Sbjct: 41 SPELAEIVGDKDLPRSEVVSKVWDYIKKHDLQ 72
>gi|220921314|ref|YP_002496615.1| SWIB/MDM2 domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945920|gb|ACL56312.1| SWIB/MDM2 domain protein [Methylobacterium nodulans ORS 2060]
Length = 110
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P +G + P + KP + SPE+ A VG IPR + + +W +I++++LQ
Sbjct: 26 PKSGDK-PNALQKPLQPSPELGAIVGTKPIPRGEVVSKVWEYIRKNSLQ 73
>gi|406910432|gb|EKD50456.1| hypothetical protein ACD_62C00538G0002 [uncultured bacterium]
Length = 85
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
K++ MKP + + A VGA IPRT+ +K +W +IK++ LQ
Sbjct: 2 AKKKESAFMKPVQPDDVLAAVVGAKPIPRTEVVKKLWEYIKKNKLQ 47
>gi|332286949|ref|YP_004418860.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
gi|330430902|gb|AEC22236.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
Length = 90
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MKP S + A +G +PRT+ K IW +IK+H+LQ
Sbjct: 9 RKPNAAFMKPLTPSATLAAIIGPEAVPRTEVTKKIWDYIKKHDLQ 53
>gi|156058185|ref|XP_001595016.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980]
gi|154702609|gb|EDO02348.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 265
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ PK V K G K +S + VG P + R Q +K IW HIK H+LQ
Sbjct: 172 SDGEPKEVIKKG---GFHKQYNLSAALADLVGEPTLSRPQVVKKIWEHIKAHDLQ 223
>gi|389688892|ref|ZP_10178457.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590376|gb|EIM30660.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 90
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 52 KPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+P K+ + KP + S E+ A VG+ +PRT+ + +W +IK +NLQ
Sbjct: 3 EPKAAKKPNPALAKPLQPSSELAAVVGSAPLPRTEVVSKVWEYIKANNLQ 52
>gi|383453556|ref|YP_005367545.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
gi|380728134|gb|AFE04136.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
Length = 110
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G++ MK S E+ A VG+ +PRT + IW +IK++NLQ
Sbjct: 27 GRKPNAAFMKEMTPSAELAAIVGSKALPRTAVVSKIWDYIKKNNLQ 72
>gi|294936387|ref|XP_002781747.1| Upstream activation factor subunit UAF30, putative [Perkinsus
marinus ATCC 50983]
gi|239892669|gb|EER13542.1| Upstream activation factor subunit UAF30, putative [Perkinsus
marinus ATCC 50983]
Length = 128
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
GI + +SPE+ VG P+ R K +W +IK HNLQ T
Sbjct: 61 GIHQLCALSPELTTIVGVPKASRVDVNKKLWVYIKSHNLQETT 103
>gi|449017562|dbj|BAM80964.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 50 SPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEI-PRTQALKLIWAHIKQHNLQ 101
S P TGKR+ G+ +P +VS + G I R + ++L+W +IK+ LQ
Sbjct: 291 SSTPSTGKRKASGLAQPLQVSEALSDICGGARILSRCEVVRLLWEYIKKQQLQ 343
>gi|297621926|ref|YP_003710063.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
gi|297377227|gb|ADI39057.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
Length = 854
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 66 PRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P +SPE+ VG+ E R ALK +WA+IK + LQ
Sbjct: 778 PSALSPELAEIVGSHEATRGDALKSVWAYIKSNKLQ 813
>gi|337294185|emb|CCB92169.1| DNA topoisomerase 1 [Waddlia chondrophila 2032/99]
Length = 854
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 66 PRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P +SPE+ VG+ E R ALK +WA+IK + LQ
Sbjct: 778 PSALSPELAEIVGSHEATRGDALKSVWAYIKSNKLQ 813
>gi|225713048|gb|ACO12370.1| YMR233W [Lepeophtheirus salmonis]
Length = 243
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 KPVTGKREPRG------IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP KR+ +G KP +S ++ VG PR + +K +WA+IK++ LQ
Sbjct: 151 KPTKAKRKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQ 206
>gi|195439808|ref|XP_002067751.1| GK12593 [Drosophila willistoni]
gi|194163836|gb|EDW78737.1| GK12593 [Drosophila willistoni]
Length = 246
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G + +SPE+ A +GA +PR + +K +WA IK+ +L
Sbjct: 169 GFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDL 207
>gi|367010370|ref|XP_003679686.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
gi|359747344|emb|CCE90475.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
Length = 219
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 73 MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ F+G +PRTQ +KL+W +IK+++LQ
Sbjct: 123 LSNFLGETSLPRTQVVKLVWDYIKKNDLQ 151
>gi|50288521|ref|XP_446690.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525998|emb|CAG59617.1| unnamed protein product [Candida glabrata]
Length = 241
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
V+PE++A +G RT+ ++ +W +IK+HNLQ
Sbjct: 130 VTPELQAVIGTHYQSRTEIVRNLWKYIKEHNLQ 162
>gi|388852014|emb|CCF54370.1| uncharacterized protein [Ustilago hordei]
Length = 262
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 12/57 (21%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK------------TIVFGK 109
+P +SP+M G E+PR +K +WA+IK +NLQ + T +FGK
Sbjct: 184 RPLILSPKMAQVCGGNEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIFGK 240
>gi|194749288|ref|XP_001957071.1| GF24247 [Drosophila ananassae]
gi|190624353|gb|EDV39877.1| GF24247 [Drosophila ananassae]
Length = 247
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G + +SPE+ A +GA +PR + +K +WA IK+ +L
Sbjct: 170 GFTRAYNLSPELSALMGAQSLPRHEVVKKVWAIIKERDL 208
>gi|85374762|ref|YP_458824.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
gi|84787845|gb|ABC64027.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
Length = 82
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ KP +SPE+E VG + R Q +W +IK+H+LQ
Sbjct: 5 NALQKPVTLSPELENVVGKGPMTRAQVTSKVWEYIKKHDLQ 45
>gi|120611529|ref|YP_971207.1| SWIB/MDM2 domain-containing protein [Acidovorax citrulli AAC00-1]
gi|326317181|ref|YP_004234853.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|120589993|gb|ABM33433.1| SWIB/MDM2 domain protein [Acidovorax citrulli AAC00-1]
gi|323374017|gb|ADX46286.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 101
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP + A VG+ +PRT+ + +WA+IK +NLQ
Sbjct: 25 AFMKALTPSPALAAVVGSDPLPRTEIISKLWAYIKANNLQ 64
>gi|38047929|gb|AAR09867.1| similar to Drosophila melanogaster CG1240, partial [Drosophila
yakuba]
Length = 133
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +G +PR + +K +WA IK+ +L
Sbjct: 52 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDL 94
>gi|348589734|ref|YP_004874196.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|347973638|gb|AEP36173.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|399116484|emb|CCG19290.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 97
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ K+ MKP S E+ A VG +PRT+ K +W +IK +LQ
Sbjct: 14 SAKKVNSAFMKPLTPSKELAAVVGDKPLPRTEVTKKVWEYIKSKDLQ 60
>gi|393769784|ref|ZP_10358303.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
gi|392724788|gb|EIZ82134.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
Length = 123
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQW----KTI--------VFG 108
+ +P + S ++ A VG +PR + + +W +IK+HNLQ + I VFG
Sbjct: 45 NALQQPLKPSADLGAIVGTNPLPRGEVVSKVWDYIKKHNLQNPENKREILADDKLKKVFG 104
Query: 109 KWECWIW 115
K +C ++
Sbjct: 105 KDKCSMF 111
>gi|156841806|ref|XP_001644274.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156114913|gb|EDO16416.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 152
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S E++ F+ + RTQA+K +W +IK +NLQ
Sbjct: 46 LSDELQDFLKVESVTRTQAVKRVWEYIKLNNLQ 78
>gi|149185583|ref|ZP_01863899.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
gi|148830803|gb|EDL49238.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
Length = 83
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 63 IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ KP +SPE+E VG + R Q +W HIK ++LQ
Sbjct: 8 LQKPVNLSPELENVVGKGPMTRAQVTSKVWDHIKANDLQ 46
>gi|347972011|ref|XP_001237540.3| AGAP004492-PA [Anopheles gambiae str. PEST]
gi|333469130|gb|EAU76871.3| AGAP004492-PA [Anopheles gambiae str. PEST]
Length = 289
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G +P +SPE+ GA +PR + +K +WA IK+ NL
Sbjct: 212 GYTRPYTLSPELAEVCGAESLPRHEVVKKMWAIIKERNL 250
>gi|302848251|ref|XP_002955658.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
gi|300259067|gb|EFJ43298.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
Length = 289
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+ KP R+S ++ ++ GA + R+ K WA++K+H LQ
Sbjct: 207 RKNNNFNKPLRLSKDLASWCGADTMGRSDLTKFFWAYVKEHKLQ 250
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S ++ F+G +PRTQ +K +W +IK +NLQ
Sbjct: 89 LSEPLQKFLGEESLPRTQVVKRLWDYIKANNLQ 121
>gi|83765756|dbj|BAE55899.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 270
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 62 GIMKPRRVSPEMEAFVGAPE-IPRTQALKLIWAHIKQHNLQWKT 104
G KP +SP + A +G E + R Q +K +WA+I++H LQ T
Sbjct: 189 GFHKPLTLSPALSALLGGEESLSRPQTVKKVWAYIREHELQDPT 232
>gi|238483641|ref|XP_002373059.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
gi|317139998|ref|XP_001817901.2| SWIB/MDM2 domain protein [Aspergillus oryzae RIB40]
gi|220701109|gb|EED57447.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
Length = 277
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 62 GIMKPRRVSPEMEAFVGAPE-IPRTQALKLIWAHIKQHNLQWKT 104
G KP +SP + A +G E + R Q +K +WA+I++H LQ T
Sbjct: 196 GFHKPLTLSPALSALLGGEESLSRPQTVKKVWAYIREHELQDPT 239
>gi|195492893|ref|XP_002094186.1| GE20337 [Drosophila yakuba]
gi|194180287|gb|EDW93898.1| GE20337 [Drosophila yakuba]
Length = 244
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +G +PR + +K +WA IK+ +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDL 205
>gi|332529043|ref|ZP_08405008.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041487|gb|EGI77848.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 130
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT------------IVFGK 109
MK SP + A VG+ +PRT+ + +WA+IK++ LQ K VFGK
Sbjct: 54 AFMKALTPSPALAAVVGSTPLPRTEVVSKLWAYIKKNGLQDKVNKRNINADDKLKTVFGK 113
Query: 110 WECWIW 115
+ ++
Sbjct: 114 AQITMF 119
>gi|194865200|ref|XP_001971311.1| GG14886 [Drosophila erecta]
gi|190653094|gb|EDV50337.1| GG14886 [Drosophila erecta]
Length = 244
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +G +PR + +K +WA IK+ +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDL 205
>gi|359843278|gb|AEV89774.1| nuclear protein [Schistocerca gregaria]
Length = 267
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+K + +SPE+ A +G +PR + +K IW IK+ NL
Sbjct: 192 IKAKSLSPELAALMGQDSMPRHEVVKKIWGIIKERNL 228
>gi|329901025|ref|ZP_08272670.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549272|gb|EGF33848.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
Length = 124
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
V ++ MKP S + A VGA +PRT+ K +W +IK++ LQ
Sbjct: 39 VVARKPNAAFMKPMTPSATLAAVVGADPLPRTEVTKKVWEYIKKNALQ 86
>gi|171056886|ref|YP_001789235.1| SWIB/MDM2 domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774331|gb|ACB32470.1| SWIB/MDM2 domain protein [Leptothrix cholodnii SP-6]
Length = 133
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 46 LATASPKPVTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
L A+ V KR P MK S + A +G PRT+ K +W +IK+H LQ
Sbjct: 40 LKKAAATDVAAKRTPNAAFMKAMTPSAALAAVIGNTPAPRTEVTKKVWEYIKKHQLQ 96
>gi|21357829|ref|NP_647745.1| CG1240 [Drosophila melanogaster]
gi|7292276|gb|AAF47684.1| CG1240 [Drosophila melanogaster]
gi|16769634|gb|AAL29036.1| LD45195p [Drosophila melanogaster]
gi|220956410|gb|ACL90748.1| CG1240-PA [synthetic construct]
Length = 244
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +G +PR + +K +WA IK+ +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDL 205
>gi|358400889|gb|EHK50204.1| hypothetical protein TRIATDRAFT_211488 [Trichoderma atroviride IMI
206040]
Length = 1158
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
AS + ++ G KP +S + A G ++ R Q +K +W HIK ++LQ
Sbjct: 172 ASGDSIKKRKAGGGFQKPFNLSETLSALCGETQLSRPQVVKKLWEHIKANDLQ 224
>gi|443897196|dbj|GAC74537.1| hypothetical protein PANT_12d00019 [Pseudozyma antarctica T-34]
Length = 262
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
+P +SP++ G E+PR +K +WA+IK +NLQ ++
Sbjct: 184 RPLILSPKLADVCGGDEMPRHAVVKQLWAYIKSNNLQNES 223
>gi|319779180|ref|YP_004130093.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|397661420|ref|YP_006502120.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|317109204|gb|ADU91950.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|394349599|gb|AFN35513.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|399114652|emb|CCG17447.1| conserved hypothetical protein [Taylorella equigenitalis 14/56]
Length = 97
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++PK V MKP S E+ A VG +PRT+ K +W +IK +LQ
Sbjct: 13 SAPKKVNS-----AFMKPLTPSKELAAVVGDKPLPRTEVTKKVWEYIKSKDLQ 60
>gi|282890289|ref|ZP_06298819.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174189|ref|YP_004650999.1| hypothetical protein PUV_01950 [Parachlamydia acanthamoebae UV-7]
gi|281499946|gb|EFB42235.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478547|emb|CCB85145.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 97
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 58 REPR---GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
+EP+ MKP +S +E +G + RT+ K +W +IK+H LQ T
Sbjct: 5 KEPKKNSAFMKPVNLSETLEELIGKGPMARTEVTKKVWEYIKKHKLQDAT 54
>gi|195336952|ref|XP_002035097.1| GM14512 [Drosophila sechellia]
gi|194128190|gb|EDW50233.1| GM14512 [Drosophila sechellia]
Length = 111
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 58 REPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
R+ G + +SPE+ A +G +PR + +K +WA IK+ +L
Sbjct: 30 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDL 72
>gi|337280016|ref|YP_004619488.1| hypothetical protein Rta_23710 [Ramlibacter tataouinensis TTB310]
gi|334731093|gb|AEG93469.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 146
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP++ A VG+ +PRT+ + +WA+IK++ LQ
Sbjct: 70 AFMKALTPSPQLAAVVGSNPLPRTEVVSKLWAYIKKNKLQ 109
>gi|452985259|gb|EME85016.1| hypothetical protein MYCFIDRAFT_195906 [Pseudocercospora fijiensis
CIRAD86]
Length = 400
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 45 TLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ + PKP K+ G KP +S + A +G ++ R Q +K IW ++K+ +LQ
Sbjct: 323 DVESGDPKPEREKK--GGFHKPMNLSEPLSALLGETQLSRPQTVKKIWGYVKERDLQ 377
>gi|399018413|ref|ZP_10720592.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
gi|398101529|gb|EJL91745.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
Length = 152
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP S + VGA +PRT+ K +W +IK+H LQ
Sbjct: 75 AFMKPLTPSAALAEVVGAKPLPRTEVTKKVWEYIKKHKLQ 114
>gi|399218972|emb|CCF75859.1| unnamed protein product [Babesia microti strain RI]
Length = 135
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 42 RTVTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
V +T+ KP GK G + P +V + + E+ R++A+KL+W +IK LQ
Sbjct: 36 NCVFYSTSKSKPFIGK----GFLVPCKVKGPLFDLLQEEELTRSEAVKLVWKYIKDQGLQ 91
>gi|452825650|gb|EME32645.1| hypothetical protein Gasu_00170 [Galdieria sulphuraria]
Length = 291
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ KP ++S + GA + R+Q +K +W +IK HNLQ
Sbjct: 208 SLQKPLKLSNLLSQICGAEYLSRSQVVKKVWEYIKLHNLQ 247
>gi|356519437|ref|XP_003528379.1| PREDICTED: uncharacterized protein LOC100799786 [Glycine max]
Length = 150
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 1 MAVSSGVF---TTTFLSPETASSFLK--PSSSGKPGQFSPVHLRTVRTVTLATASPKPVT 55
MA SSG+F ++ L P +F++ P S+G F V T++ +S KP
Sbjct: 1 MAQSSGLFLCSSSRVLPPPETHTFMRTRPFSAGLCTIF-------VSCCTVSQSS-KPA- 51
Query: 56 GKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIK 96
R+ GIMKPR+VSPEME V +KLI +K
Sbjct: 52 --RKICGIMKPRKVSPEMEDLV-------CMLIKLINQQLK 83
>gi|242011317|ref|XP_002426399.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
gi|212510498|gb|EEB13661.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
Length = 258
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G KP +SPE+ VG +PR + +K IW IK+ +L
Sbjct: 181 GYTKPCNLSPELAKLVGRDSMPRHEVVKKIWEIIKERDL 219
>gi|385305614|gb|EIF49575.1| swib domain-containing protein [Dekkera bruxellensis AWRI1499]
Length = 190
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 69 VSPEMEAFVGAPE-IPRTQALKLIWAHIKQHNLQ 101
++PE+ F+G E + R A++++W +IK++NLQ
Sbjct: 50 ITPELARFLGTTEQVSRVDAIRIMWKYIKENNLQ 83
>gi|407939544|ref|YP_006855185.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
gi|407897338|gb|AFU46547.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
Length = 106
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
MK SP + A VG+ +PRT+ + +W +IK +NLQ T
Sbjct: 30 AFMKALTPSPALAAVVGSAPLPRTEIISKLWVYIKANNLQDAT 72
>gi|224588358|gb|ACN58982.1| SWIB complex BAF60b [uncultured bacterium BLR19]
Length = 133
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
R+P MK S + +G +PRTQ +K IW +IK++ LQ KT
Sbjct: 51 RKPNAAFMKALTPSATLADVIGGSPVPRTQVIKKIWDYIKKNGLQDKT 98
>gi|319794595|ref|YP_004156235.1| swib/mdm2 domain-containing protein [Variovorax paradoxus EPS]
gi|315597058|gb|ADU38124.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus EPS]
Length = 148
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK 103
MK SP + A VG+ +PRT + +W +IK++NLQ K
Sbjct: 72 AFMKALTPSPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDK 113
>gi|398809571|ref|ZP_10568417.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
gi|398085579|gb|EJL76233.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
Length = 147
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK 103
MK SP + A VG+ +PRT + +W +IK++NLQ K
Sbjct: 71 AFMKALTPSPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDK 112
>gi|392576961|gb|EIW70091.1| hypothetical protein TREMEDRAFT_38764 [Tremella mesenterica DSM
1558]
Length = 316
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + AF+G P + R Q +K IW ++K+++LQ
Sbjct: 195 LSDSLAAFIGEPSLSRPQTVKRIWDYVKENDLQ 227
>gi|321459378|gb|EFX70432.1| hypothetical protein DAPPUDRAFT_217355 [Daphnia pulex]
Length = 465
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 60 PRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
P+G +K ++SPE+ +G +PR + +K +W+ IK+ NL
Sbjct: 386 PKGGVKAVKLSPELSDIMGTESMPRPEVVKKMWSIIKERNL 426
>gi|239814872|ref|YP_002943782.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus S110]
gi|239801449|gb|ACS18516.1| SWIB/MDM2 domain protein [Variovorax paradoxus S110]
Length = 147
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK 103
MK SP + A VG+ +PRT + +W +IK++NLQ K
Sbjct: 71 AFMKALTPSPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDK 112
>gi|395763959|ref|ZP_10444628.1| hypothetical protein JPAM2_19696 [Janthinobacterium lividum PAMC
25724]
Length = 132
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MK S E+ A VGA +PRT+ K +W +IK+ +LQ
Sbjct: 50 RKPNAAFMKAMTPSKELAAVVGAAPLPRTEVTKKVWDYIKKLDLQ 94
>gi|156390228|ref|XP_001635173.1| predicted protein [Nematostella vectensis]
gi|156222264|gb|EDO43110.1| predicted protein [Nematostella vectensis]
Length = 1583
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 48 TASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
T K +G + G K +SPE+ A +G ++ R+ +K +WA IK+ NL
Sbjct: 1487 TPQKKEPSGTKGKTGFGKLMVLSPELAAILGQDKMSRSDVVKGMWAIIKERNL 1539
>gi|409408941|ref|ZP_11257376.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
gi|386432263|gb|EIJ45091.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
Length = 158
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP S + VGA +PRT+ K +W +IK+H LQ
Sbjct: 81 AFMKPLTPSAALGEVVGAKPLPRTEVTKKVWEYIKKHKLQ 120
>gi|151945377|gb|EDN63620.1| upstream activation factor subunit [Saccharomyces cerevisiae
YJM789]
gi|349581446|dbj|GAA26604.1| K7_Uaf30p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 228
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
>gi|323302999|gb|EGA56803.1| Uaf30p [Saccharomyces cerevisiae FostersB]
Length = 228
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
>gi|46445959|ref|YP_007324.1| hypothetical protein pc0325 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399600|emb|CAF23049.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 98
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 55 TGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
T ++ M+P +VS + VG +PRT+ K +W +IK++ LQ +T
Sbjct: 5 TKDKKNSAFMRPVQVSEVLAEIVGNGPMPRTEVTKRVWDYIKKNKLQDQT 54
>gi|297620618|ref|YP_003708755.1| hypothetical protein wcw_0377 [Waddlia chondrophila WSU 86-1044]
gi|297375919|gb|ADI37749.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337292761|emb|CCB90766.1| putative uncharacterized protein [Waddlia chondrophila 2032/99]
Length = 94
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+T +++P MKP VS + VG + RT+ K +W +IK++ LQ
Sbjct: 1 MTKQKKPSAFMKPVGVSDALAEIVGKGPMARTEVTKKLWDYIKKNKLQ 48
>gi|345490916|ref|XP_001607941.2| PREDICTED: upstream activation factor subunit spp27-like [Nasonia
vitripennis]
Length = 265
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++PR + +K +W+ IK+ L
Sbjct: 195 LSPELAALVGAKQMPRYEVVKKLWSIIKERKL 226
>gi|323307329|gb|EGA60609.1| Uaf30p [Saccharomyces cerevisiae FostersO]
Length = 294
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
>gi|398366129|ref|NP_014938.3| Uaf30p [Saccharomyces cerevisiae S288c]
gi|74645010|sp|Q08747.1|UAF30_YEAST RecName: Full=Upstream activation factor subunit UAF30; AltName:
Full=Upstream activation factor 30 KDa subunit;
Short=p30
gi|1420654|emb|CAA99523.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407596|gb|EDV10863.1| hypothetical protein SCRG_01676 [Saccharomyces cerevisiae RM11-1a]
gi|256272579|gb|EEU07558.1| Uaf30p [Saccharomyces cerevisiae JAY291]
gi|259149770|emb|CAY86574.1| Uaf30p [Saccharomyces cerevisiae EC1118]
gi|285815167|tpg|DAA11060.1| TPA: Uaf30p [Saccharomyces cerevisiae S288c]
gi|392296622|gb|EIW07724.1| Uaf30p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 228
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
>gi|345567828|gb|EGX50730.1| hypothetical protein AOL_s00054g816 [Arthrobotrys oligospora ATCC
24927]
Length = 289
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
+P +SP++ +G ++ R + +K IWA+IKQ++LQ +
Sbjct: 172 QPLILSPQLSTLLGETQLSRPETVKRIWAYIKQNDLQDQN 211
>gi|398394521|ref|XP_003850719.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
gi|339470598|gb|EGP85695.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
Length = 297
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
K + G KP +S + A +G ++ R Q +K IWA++K+ +LQ T
Sbjct: 205 KEKKGGFHKPMHLSEPLAAMLGENQLSRPQTVKRIWAYVKERDLQEPT 252
>gi|343427276|emb|CBQ70804.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 260
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 12/57 (21%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWK------------TIVFGK 109
+P +SP++ G E+PR +K +WA+IK +NLQ + T +FGK
Sbjct: 182 RPLILSPKLADVCGGNEMPRHAVVKQLWAYIKSNNLQNEGNKRQILCDAKLTSIFGK 238
>gi|442318654|ref|YP_007358675.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486296|gb|AGC42991.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 105
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK S + VG+ +PRT+ +K +WA+IK++NLQ
Sbjct: 30 MKEMTPSAALAEIVGSKPLPRTEVVKKLWAYIKKNNLQ 67
>gi|66525165|ref|XP_392065.2| PREDICTED: upstream activation factor subunit spp27-like [Apis
mellifera]
gi|380016161|ref|XP_003692057.1| PREDICTED: upstream activation factor subunit spp27-like [Apis
florea]
Length = 261
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K IW+ IK+ NL
Sbjct: 191 LSPELAAVVGAEQMARHEVVKKIWSIIKERNL 222
>gi|323352202|gb|EGA84739.1| Uaf30p [Saccharomyces cerevisiae VL3]
gi|365762956|gb|EHN04488.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 211
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 109 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 141
>gi|182412732|ref|YP_001817798.1| SWIB/MDM2 domain-containing protein [Opitutus terrae PB90-1]
gi|177839946|gb|ACB74198.1| SWIB/MDM2 domain protein [Opitutus terrae PB90-1]
Length = 76
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKTI 105
MKP + A VG+ +PRT+ K +WA+IK++ LQ K +
Sbjct: 1 MKPVTPDAALAAVVGSNPMPRTELTKKLWAYIKKNGLQDKKV 42
>gi|294865385|ref|XP_002764397.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239863683|gb|EEQ97114.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 94
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQWKT 104
GI + +SPE+ VG + R K +W +IK HNLQ T
Sbjct: 27 GIHQLCALSPELTTIVGVLKASRVDVNKKLWVYIKSHNLQETT 69
>gi|323331595|gb|EGA73010.1| Uaf30p [Saccharomyces cerevisiae AWRI796]
Length = 211
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA+IK HNLQ
Sbjct: 109 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 141
>gi|391231698|ref|ZP_10267904.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
gi|391221359|gb|EIP99779.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
Length = 91
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+P MKP + + A VGA +PRT+ K +W +IK++ LQ
Sbjct: 8 RKPNAAFMKPVQPDDALAAVVGAKPLPRTELTKKLWEYIKKNKLQ 52
>gi|46122793|ref|XP_385950.1| hypothetical protein FG05774.1 [Gibberella zeae PH-1]
Length = 1121
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 55 TGKREPRG--IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TGK+ G KP +S + VG ++ R Q +K +W HIK ++LQ
Sbjct: 171 TGKKRKAGGGFQKPFNLSETLSELVGETQLSRPQVVKKLWEHIKANDLQ 219
>gi|389622149|ref|XP_003708728.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|351648257|gb|EHA56116.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|440465079|gb|ELQ34421.1| hypothetical protein OOU_Y34scaffold00767g25 [Magnaporthe oryzae
Y34]
gi|440481137|gb|ELQ61753.1| hypothetical protein OOW_P131scaffold01155g25 [Magnaporthe oryzae
P131]
Length = 285
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + G P + R Q +K +W HIK +NLQ
Sbjct: 204 GFQKPFHLSASLAEVCGEPTLSRPQVVKKLWEHIKGNNLQ 243
>gi|395007049|ref|ZP_10390828.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
gi|394314936|gb|EJE51781.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
Length = 110
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP + A VG+ +PRT+ + +W +IK +NLQ
Sbjct: 34 AFMKALTPSPALAAVVGSAPLPRTEIISKLWVYIKANNLQ 73
>gi|365089912|ref|ZP_09328420.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
gi|363416605|gb|EHL23709.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
Length = 106
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP + A VG+ +PRT+ + +W +IK +NLQ
Sbjct: 30 AFMKALTPSPALAAVVGSAPLPRTEIISKLWVYIKANNLQ 69
>gi|351728366|ref|ZP_08946057.1| SWIB/MDM2 domain-containing protein [Acidovorax radicis N35]
Length = 106
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP + A VG+ +PRT+ + +W +IK +NLQ
Sbjct: 30 AFMKALTPSPALAAVVGSAPLPRTEIISKLWVYIKANNLQ 69
>gi|403217664|emb|CCK72157.1| hypothetical protein KNAG_0J00740 [Kazachstania naganishii CBS
8797]
Length = 194
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 56 GKREPRGIMKPRRV-SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G P+G+ V S ++ F+GA +PRT+ ++ +W +IK H LQ
Sbjct: 102 GDGAPKGLAARELVLSEKLAQFLGAARLPRTEVVRGVWDYIKAHELQ 148
>gi|328699397|ref|XP_001947263.2| PREDICTED: upstream activation factor subunit spp27-like
[Acyrthosiphon pisum]
Length = 258
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G K +SPE+ + +G+ +PR + +K +WA IK+ NL
Sbjct: 181 GYTKSVALSPELASLMGSEALPRHEVVKKMWAIIKERNL 219
>gi|365758273|gb|EHN00124.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 219
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + +G P + RT ++ +WA+IK+H+LQ
Sbjct: 128 LSKSLANLLGEPRLTRTDVVRQVWAYIKEHDLQ 160
>gi|160900051|ref|YP_001565633.1| SWIB/MDM2 domain-containing protein [Delftia acidovorans SPH-1]
gi|333913833|ref|YP_004487565.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
gi|160365635|gb|ABX37248.1| SWIB/MDM2 domain protein [Delftia acidovorans SPH-1]
gi|333744033|gb|AEF89210.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
Length = 99
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP SP + A VG+ +PRT+ + +W +IK + LQ
Sbjct: 23 AFMKPLTPSPALAAVVGSTPLPRTEIISKLWVYIKANKLQ 62
>gi|380492995|emb|CCF34198.1| DEK C terminal domain-containing protein [Colletotrichum
higginsianum]
Length = 266
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + +G P++ R Q +K +W HIK ++LQ
Sbjct: 185 GFQKPFNLSEPLAELLGEPQLSRPQVVKKLWEHIKGNDLQ 224
>gi|301105769|ref|XP_002901968.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099306|gb|EEY57358.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 375
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 68 RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R+SP + +G E+ R A+K WA++K+H LQ
Sbjct: 301 RLSPALSNMLGKSELTRPAAIKEFWAYVKKHELQ 334
>gi|121610030|ref|YP_997837.1| SWIB/MDM2 domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121554670|gb|ABM58819.1| SWIB/MDM2 domain protein [Verminephrobacter eiseniae EF01-2]
Length = 99
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 58 REPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
R P MK SP + A VG+ +PRTQ + +W +I+ +NLQ
Sbjct: 18 RSPNAAFMKALTPSPALAAVVGSAPLPRTQIISKLWIYIRANNLQ 62
>gi|121606850|ref|YP_984179.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
gi|120595819|gb|ABM39258.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
Length = 990
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 51 PKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
PK V P +KP S + A +G+ ++ R Q +K +W +IK NLQ
Sbjct: 906 PKAVRKAAAPGAGLKP---SDALAAIIGSEQVARPQVIKKLWDYIKDQNLQ 953
>gi|402216656|gb|EJT96741.1| SWIB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 303
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +SP ++ G +PR +K +W HIK + LQ
Sbjct: 219 GFQKPYALSPALQELTGETALPRPLVVKALWDHIKANQLQ 258
>gi|115396856|ref|XP_001214067.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193636|gb|EAU35336.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1141
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFVGAPE-IPRTQALKLIWAHIKQHNLQ 101
G KP +SP + A +G E + R Q +K +W +I +H+LQ
Sbjct: 205 GFHKPLNLSPALSALLGGEETMSRPQTVKKLWQYIHEHDLQ 245
>gi|154299113|ref|XP_001549977.1| hypothetical protein BC1G_11869 [Botryotinia fuckeliana B05.10]
gi|347840242|emb|CCD54814.1| hypothetical protein [Botryotinia fuckeliana]
Length = 268
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 47 ATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+ PK V K G K +S + VG P + R Q +K IW HIK NLQ
Sbjct: 175 SDGEPKEVVRKG---GFHKQYNLSAALADLVGEPTLSRPQVVKKIWEHIKSLNLQ 226
>gi|29840743|ref|NP_829849.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila caviae
GPIC]
gi|29835093|gb|AAP05727.1| DNA topoisomerase I [Chlamydophila caviae GPIC]
Length = 861
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
SPE+ +G + R +A K +W +IK HNLQ
Sbjct: 790 SPELALMIGDEPVARGEATKKVWKYIKDHNLQ 821
>gi|307214555|gb|EFN89540.1| Upstream activation factor subunit UAF30 [Harpegnathos saltator]
Length = 302
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K +W+ IK+ NL
Sbjct: 232 LSPELAAIVGAEQMARHEVVKKVWSIIKERNL 263
>gi|312378188|gb|EFR24830.1| hypothetical protein AND_10347 [Anopheles darlingi]
Length = 297
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
G +P +S ++ A GA +PR + +K IW IK+ NL
Sbjct: 220 GYTRPYTLSADLAALCGAESLPRHEVVKKIWTIIKERNL 258
>gi|207340922|gb|EDZ69123.1| YOR295Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 228
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+S + + +G E+ RT+ ++ +WA++K HNLQ
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYVKAHNLQ 158
>gi|408396150|gb|EKJ75315.1| hypothetical protein FPSE_04504 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + VG ++ R Q +K +W HIK ++LQ
Sbjct: 180 GFQKPFNLSETLSELVGETQLSRPQVVKKLWEHIKANDLQ 219
>gi|383851816|ref|XP_003701427.1| PREDICTED: upstream activation factor subunit spp27-like [Megachile
rotundata]
Length = 262
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K +W+ IK+ NL
Sbjct: 192 LSPELAAVVGAEQMARHEVVKKVWSIIKERNL 223
>gi|342887025|gb|EGU86688.1| hypothetical protein FOXB_02794 [Fusarium oxysporum Fo5176]
Length = 262
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + VG ++ R Q +K +W HIK ++LQ
Sbjct: 181 GFQKPFNLSETLSELVGETQLSRPQVVKKLWEHIKANDLQ 220
>gi|159130432|gb|EDP55545.1| SWIB/MDM2 domain protein [Aspergillus fumigatus A1163]
Length = 287
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFV-GAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +SP + A + G + R Q +K +W +I++HNLQ
Sbjct: 206 GFHKPLNLSPALSALLDGETTLSRPQTVKRLWQYIREHNLQ 246
>gi|146322353|ref|XP_749952.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
gi|129556975|gb|EAL87914.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
Length = 287
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 62 GIMKPRRVSPEMEAFV-GAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +SP + A + G + R Q +K +W +I++HNLQ
Sbjct: 206 GFHKPLNLSPALSALLDGETTLSRPQTVKRLWQYIREHNLQ 246
>gi|373854316|ref|ZP_09597114.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
gi|372472183|gb|EHP32195.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
Length = 77
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP + + A VGA +PRT+ K +W +IK++ LQ
Sbjct: 1 MKPVQPDDALAAVVGAKPLPRTELTKKLWEYIKKNKLQ 38
>gi|332018104|gb|EGI58718.1| Upstream activation factor subunit spp27 [Acromyrmex echinatior]
Length = 334
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K +W+ IK+ NL
Sbjct: 264 LSPELAAVVGAEQMARHEVVKKVWSIIKERNL 295
>gi|425771362|gb|EKV09807.1| hypothetical protein PDIP_63010 [Penicillium digitatum Pd1]
gi|425776979|gb|EKV15176.1| hypothetical protein PDIG_28570 [Penicillium digitatum PHI26]
Length = 306
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + A +G P + R Q +K +W +I+++ LQ
Sbjct: 226 GFHKPMNLSEPLSALLGEPTLSRPQTVKKVWQYIRENELQ 265
>gi|307172235|gb|EFN63752.1| Upstream activation factor subunit UAF30 [Camponotus floridanus]
Length = 262
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K +W+ IK+ NL
Sbjct: 192 LSPELAAVVGAEQMARHEVVKKVWSIIKERNL 223
>gi|89897832|ref|YP_514942.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila felis
Fe/C-56]
gi|89331204|dbj|BAE80797.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila felis
Fe/C-56]
Length = 862
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
SP++ +G + R +A K IW +IK HNLQ
Sbjct: 791 SPQLAQMIGNEPVARGEATKKIWKYIKDHNLQ 822
>gi|221066190|ref|ZP_03542295.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|264679170|ref|YP_003279077.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|299533552|ref|ZP_07046928.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|418529807|ref|ZP_13095735.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
gi|220711213|gb|EED66581.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|262209683|gb|ACY33781.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|298718458|gb|EFI59439.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|371453084|gb|EHN66108.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
Length = 102
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP S + A VG +PRT+ + +W +IK +NLQ
Sbjct: 26 AFMKPLTPSAALAAVVGKDPLPRTEIISKLWVYIKANNLQ 65
>gi|182678258|ref|YP_001832404.1| SWIB/MDM2 domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634141|gb|ACB94915.1| SWIB/MDM2 domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 114
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP + S E+ VG +PRT+ + +W +IK+H LQ
Sbjct: 41 KPLQPSKELAEIVGEAPLPRTEVVSKVWEYIKKHKLQ 77
>gi|217977994|ref|YP_002362141.1| SWIB/MDM2 domain-containing protein [Methylocella silvestris BL2]
gi|217503370|gb|ACK50779.1| SWIB/MDM2 domain protein [Methylocella silvestris BL2]
Length = 108
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 65 KPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
KP + S E+ VG+ +PRT+ + +W +IK+H LQ
Sbjct: 35 KPLQPSKELAEVVGSAPLPRTEVVSKVWEYIKKHKLQ 71
>gi|282891548|ref|ZP_06300039.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174870|ref|YP_004651680.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
gi|281498516|gb|EFB40844.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479228|emb|CCB85826.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
Length = 864
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SPE+ VGA E+ R +K +W +I+ H LQ
Sbjct: 791 LSPELAQVVGANEMSRGDVMKKVWDYIRAHQLQ 823
>gi|348684557|gb|EGZ24372.1| hypothetical protein PHYSODRAFT_483570 [Phytophthora sojae]
Length = 445
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 22/94 (23%)
Query: 8 FTTTFLSPETASSFLKPSSSGKPGQFSPVHLRTVRTVTLATASPKPVTGKREPRGIMKPR 67
F TT + +S F++ + +GKP + L+TV V K
Sbjct: 328 FGTTLV---ISSGFVRSTQAGKPTAKTS-QLKTVAMVN------------------NKLY 365
Query: 68 RVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++SP + +G E+ R A+K WA++K+H LQ
Sbjct: 366 KLSPSLSHLLGKSELTRPAAIKEFWAYVKEHKLQ 399
>gi|427400619|ref|ZP_18891857.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
gi|425720444|gb|EKU83366.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
Length = 126
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 49 ASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
++ KP ++ MK S + A VG +PRT+ K +W +IK +LQ
Sbjct: 36 SADKPAAARKPNAAFMKAMTPSATLAAVVGDKPLPRTEVTKKVWDYIKSKDLQ 88
>gi|319764850|ref|YP_004128787.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
gi|330827055|ref|YP_004390358.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
gi|317119411|gb|ADV01900.1| DNA topoisomerase III [Alicycliphilus denitrificans BC]
gi|329312427|gb|AEB86842.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
Length = 973
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
S ++ A +GA + R +A+K +W +IK HNLQ
Sbjct: 905 SAQLAAVIGAEPVARPEAVKKMWDYIKAHNLQ 936
>gi|396458098|ref|XP_003833662.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
gi|312210210|emb|CBX90297.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
Length = 285
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +SP + +G ++ R Q +K IW ++K+ +LQ
Sbjct: 203 GFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKERDLQ 242
>gi|358380180|gb|EHK17858.1| hypothetical protein TRIVIDRAFT_80752 [Trichoderma virens Gv29-8]
Length = 266
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +SP + G ++ R Q +K +W HIK ++LQ
Sbjct: 186 GFQKPFILSPTLSELCGETQLSRPQVVKKLWEHIKANDLQ 225
>gi|197105527|ref|YP_002130904.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196478947|gb|ACG78475.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 86
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 54 VTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
TGK + KP S E+ A VG+ ++ R + + IW +IK++NLQ
Sbjct: 2 ATGKN-TNALQKPLTPSSELAAVVGSGQLSRGETVSKIWDYIKKNNLQ 48
>gi|434403605|ref|YP_007146490.1| non-ribosomal peptide synthase/amino acid adenylation enzyme
[Cylindrospermum stagnale PCC 7417]
gi|428257860|gb|AFZ23810.1| non-ribosomal peptide synthase/amino acid adenylation enzyme
[Cylindrospermum stagnale PCC 7417]
Length = 1533
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 46 LATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHI 95
L A P GK E + + P V PE++A AP P AL IW +
Sbjct: 939 LLKALPLTANGKIERKSLPAPDAVKPELQATFVAPRTPAEVALAKIWVEL 988
>gi|340789069|ref|YP_004754534.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
gi|340554336|gb|AEK63711.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
Length = 216
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 53 PVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
P ++ MK S + A VGA +PRT+ K +W +IK+H LQ
Sbjct: 130 PKVARKPNAAFMKALTPSAVLAAVVGATPLPRTEVTKKVWEYIKKHKLQ 178
>gi|171680064|ref|XP_001904978.1| hypothetical protein [Podospora anserina S mat+]
gi|170939658|emb|CAP64885.1| unnamed protein product [Podospora anserina S mat+]
Length = 263
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + G P++ R Q +K +W HIK + LQ
Sbjct: 182 GFQKPFNLSEALADVCGEPQLSRPQVVKKLWDHIKANELQ 221
>gi|302794588|ref|XP_002979058.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
gi|300153376|gb|EFJ20015.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
Length = 292
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+K R+SPE+ A G + R +A++ +W +I+++NLQ
Sbjct: 101 LKAFRLSPELRAVTGHHILRRHEAVQCLWRYIRENNLQ 138
>gi|114217209|dbj|BAF31167.1| polyprotein [Turnip mosaic virus]
Length = 3164
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 11 TFLSPETASSFLKPSSSG--KPGQFSPVHLRTVRTVTLAT--ASPK----------PVTG 56
TF S T ++ KP+S+G + G F PV LRT T+AT A PK PV
Sbjct: 5 TFASAITNATINKPTSTGMVQFGNFPPVPLRTTAITTVATPVAQPKLHTVQFGSLDPVVV 64
Query: 57 KREPRGIMKPRRVSPEMEAFVGAPEIPRTQALK 89
K K R P +E V E+ + K
Sbjct: 65 KGGAGSSAKTTRQQPNVEIDVSLREVAALEVAK 97
>gi|254446854|ref|ZP_05060329.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
gi|198256279|gb|EDY80588.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
Length = 77
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 64 MKPRRVSPE--MEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MKP V+P+ + A VGA +PRT+ K +W +IK ++LQ
Sbjct: 1 MKP--VTPDAVLSAVVGADPLPRTELTKKLWDYIKSNDLQ 38
>gi|340725447|ref|XP_003401081.1| PREDICTED: upstream activation factor subunit spp27-like [Bombus
terrestris]
Length = 264
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNL 100
+SPE+ A VGA ++ R + +K +W+ IK+ NL
Sbjct: 194 LSPELSAVVGAEQMARHEVVKKMWSIIKERNL 225
>gi|347820345|ref|ZP_08873779.1| SWIB/MDM2 domain-containing protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 99
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK SP + A VG+ +PRT+ + +W +I+ +NLQ
Sbjct: 23 AFMKALTPSPALAAVVGSAPLPRTEIVSKLWVYIRANNLQ 62
>gi|302893631|ref|XP_003045696.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
gi|256726623|gb|EEU39983.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
Length = 1112
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
G KP +S + VG ++ R Q +K +W HIK ++LQ
Sbjct: 179 GFQKPFNLSTTLSELVGETQLSRPQVVKKLWEHIKANDLQ 218
>gi|255730345|ref|XP_002550097.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132054|gb|EER31612.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 230
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 69 VSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+SP++ + +G + R + +KL+W++IK +NLQ
Sbjct: 117 LSPDLTSVIGVEKTSRPKVVKLLWSYIKDNNLQ 149
>gi|338733782|ref|YP_004672255.1| hypothetical protein SNE_A18870 [Simkania negevensis Z]
gi|336483165|emb|CCB89764.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 76
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 64 MKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
M+P +S E+ VG +PRT+ K +WA+IK++ Q
Sbjct: 1 MQPMNISTELAEVVGKGPMPRTEVTKKLWAYIKKNKRQ 38
>gi|328858897|gb|EGG08008.1| hypothetical protein MELLADRAFT_77485 [Melampsora larici-populina
98AG31]
Length = 304
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 61 RGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
+GI K SP + +G R Q +K IW HIK ++LQ
Sbjct: 194 KGIHKEMNCSPALGDLIGVLTCSRPQVVKKIWEHIKANDLQ 234
>gi|91790539|ref|YP_551491.1| DNA topoisomerase III [Polaromonas sp. JS666]
gi|91699764|gb|ABE46593.1| DNA topoisomerase III [Polaromonas sp. JS666]
Length = 992
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Query: 44 VTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
V A+PKP G +KP S + A +GA + RTQ +K +W +IK LQ
Sbjct: 908 VARKAATPKPGAG-------LKP---SDSLAAVIGAEPVARTQVIKKLWDYIKAEGLQ 955
>gi|302420957|ref|XP_003008309.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353960|gb|EEY16388.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 268
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 54 VTGKREPRG-IMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
T KR+P G KP +S + + P++ R Q +K +W HIK +NLQ
Sbjct: 177 ATPKRKPGGGFQKPFNLSYPLAELLKEPQLSRPQVVKKLWEHIKGNNLQ 225
>gi|67516157|ref|XP_657964.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|40746610|gb|EAA65766.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|259489402|tpe|CBF89645.1| TPA: SWIB/MDM2 domain protein (AFU_orthologue; AFUA_1G02020)
[Aspergillus nidulans FGSC A4]
Length = 279
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 55 TGKREPR--GIMKPRRVSPEMEAFVG-APEIPRTQALKLIWAHIKQHNLQ 101
+GK+ R G KP +SP + A +G A + R Q +K +W +I +H+LQ
Sbjct: 189 SGKKVNRSGGFHKPLNLSPALSALLGGAATLSRPQTVKKLWEYIHEHDLQ 238
>gi|297741335|emb|CBI32466.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 50 SPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
S K V ++ G K +SP+++ VGA E+ Q +K W +I++++LQ
Sbjct: 15 SDKVVIDVKKRGGYNKLCSLSPQLQKIVGAAELTGPQVVKKFWTYIQENSLQ 66
>gi|124265249|ref|YP_001019253.1| hypothetical protein Mpe_A0056 [Methylibium petroleiphilum PM1]
gi|124258024|gb|ABM93018.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 133
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 62 GIMKPRRVSPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
MK S + A VG +PRT K IW +IK+H LQ
Sbjct: 57 AFMKALTPSAALAAIVGDKPLPRTDVTKKIWEYIKKHKLQ 96
>gi|337281415|ref|YP_004620887.1| type IA DNA topoisomerase [Ramlibacter tataouinensis TTB310]
gi|334732492|gb|AEG94868.1| Candidate type IA DNA topoisomerase [Ramlibacter tataouinensis
TTB310]
Length = 989
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 70 SPEMEAFVGAPEIPRTQALKLIWAHIKQHNLQ 101
SP++ A VGA + RT+ +K +W +IK + LQ
Sbjct: 921 SPQLAAVVGAEPVARTEVIKKLWDYIKANGLQ 952
>gi|451856674|gb|EMD69965.1| hypothetical protein COCSADRAFT_132344 [Cochliobolus sativus
ND90Pr]
Length = 540
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 44 VTLATASPKPVTGKREPRGIMKPRRVSPEMEAFVGAPEIPRTQALKL 90
V++ T + +PVT + EP I+ R +PE+EA V P IP + + L
Sbjct: 182 VSIVTPTVRPVTPEPEPADIVSVRSATPEIEAIVPQPAIPEPEEISL 228
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.132 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,993,614,725
Number of Sequences: 23463169
Number of extensions: 78989508
Number of successful extensions: 205724
Number of sequences better than 100.0: 494
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 205173
Number of HSP's gapped (non-prelim): 591
length of query: 117
length of database: 8,064,228,071
effective HSP length: 84
effective length of query: 33
effective length of database: 6,093,321,875
effective search space: 201079621875
effective search space used: 201079621875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)