BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033524
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5V9P7|RS16_SPHWW 30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1
Length = 154
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V IRLAR G K +P+YR++ AD+RSPRDG +D KR+ L+ DR K
Sbjct: 1 MAVSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+WLSVGAQP+D V R L AG+
Sbjct: 61 HWLSVGAQPTDRVARFLDAAGV 82
>sp|Q5NNL0|RS16_ZYMMO 30S ribosomal protein S16 OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=rpsP PE=3 SV=1
Length = 143
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 14/83 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V IRL+R G K +PFYR++ A+SRSPRDG +D+ R+ ++ DR +
Sbjct: 1 MAVSIRLSRGGAKRRPFYRIVIANSRSPRDGSFIEKIGSYNPQLPKDNENRVIVDLDRAR 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLL 69
+WLSVGAQP+D V R L AGLL
Sbjct: 61 HWLSVGAQPTDRVARFLDAAGLL 83
>sp|Q16AN8|RS16_ROSDO 30S ribosomal protein S16 OS=Roseobacter denitrificans (strain
ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1
Length = 122
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +PFYR++AADSR PRDG +DS +R+ ++ +RV+
Sbjct: 1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
YWL GAQP+D V R+L AGL
Sbjct: 61 YWLGQGAQPTDRVARMLEAAGL 82
>sp|Q5LNF2|RS16_RUEPO 30S ribosomal protein S16 OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=rpsP PE=3 SV=1
Length = 121
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 14/83 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +PFYR++AADSR PRDG +DS +R+ ++ +RV+
Sbjct: 1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDVERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLL 69
YWLS GAQ +D V R+L AG++
Sbjct: 61 YWLSQGAQTTDRVARMLEAAGVV 83
>sp|B6IP92|RS16_RHOCS 30S ribosomal protein S16 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rpsP PE=3 SV=1
Length = 109
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRL+R G K +PFY ++ A+SR+PRDG D +R+ L DR+K
Sbjct: 1 MSVKIRLSRGGAKKRPFYSIVVANSRAPRDGDFIEKVGTYNPMVPHDHPERVVLQEDRIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPR 84
WL+ GAQP+D V R L +A L+P P + +K P+
Sbjct: 61 EWLAKGAQPTDRVARFLGKANLIPMPALRETPKKSAPK 98
>sp|Q98E70|RS16_RHILO 30S ribosomal protein S16 OS=Rhizobium loti (strain MAFF303099)
GN=rpsP PE=3 SV=1
Length = 133
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 13/81 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-------------DSGKRMGLNFDRVKY 47
M ++IRLAR G K +P+Y V+ AD+RSPRDG+ G+R+ ++ DRVK+
Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADARSPRDGRFIESLGSWNPLLPKDGERVKVDADRVKH 60
Query: 48 WLSVGAQPSDPVQRILFRAGL 68
WLS GAQP+D V R L AGL
Sbjct: 61 WLSHGAQPTDRVLRFLDEAGL 81
>sp|Q2VZV8|RS16_MAGSA 30S ribosomal protein S16 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rpsP PE=3 SV=1
Length = 123
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 14/86 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ--------------DSGKRMGLNFDRVK 46
M ++IRL+R G K +PFY+++ AD+R+PRDG+ D+G+R L+ DRVK
Sbjct: 1 MALKIRLSRGGAKKRPFYKIVVADARAPRDGRFIEKVGTYNPMLPNDNGQRWILDEDRVK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPP 72
+WLSVGAQP+D + R GL+ P
Sbjct: 61 HWLSVGAQPTDRLVRFFADKGLVAKP 86
>sp|A8LMC0|RS16_DINSH 30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DFL
12) GN=rpsP PE=3 SV=1
Length = 130
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 14/84 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +PFYR++AADSR PRDG +DS R+ ++ +RV+
Sbjct: 1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDLERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLP 70
YWL GA+P+D V R+L A +LP
Sbjct: 61 YWLGEGAKPTDRVARMLEAAEVLP 84
>sp|Q2RV59|RS16_RHORT 30S ribosomal protein S16 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rpsP PE=3 SV=1
Length = 124
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M +RIRLAR G K +PFYR++ ADSRSPRDG +D +R+ L +RVK
Sbjct: 1 MSLRIRLARGGAKKRPFYRIVVADSRSPRDGRFIEKLGTFDPMLPRDHERRVVLKDERVK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
YWL VGA PSD V R L +GL
Sbjct: 61 YWLGVGALPSDRVARFLGLSGL 82
>sp|Q92L43|RS16_RHIME 30S ribosomal protein S16 OS=Rhizobium meliloti (strain 1021)
GN=rpsP PE=3 SV=1
Length = 124
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 14/86 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y+++ AD+RSPRDG +D KR+ LN +RV+
Sbjct: 1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPP 72
+W++ GAQP+D V R L +AGL P
Sbjct: 61 HWIAQGAQPTDRVMRFLDQAGLAKRP 86
>sp|C3MAG3|RS16_RHISN 30S ribosomal protein S16 OS=Rhizobium sp. (strain NGR234)
GN=rpsP PE=3 SV=1
Length = 124
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 14/86 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y+++ AD+RSPRDG +D KR+ LN +RV
Sbjct: 1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKIGSWNPMLSKDDEKRIELNAERVS 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPP 72
+W++ GAQP+D V R L +AGL P
Sbjct: 61 HWIAQGAQPTDRVLRFLDQAGLAKRP 86
>sp|Q1RGQ5|RS16_RICBR 30S ribosomal protein S16 OS=Rickettsia bellii (strain RML369-C)
GN=rpsP PE=3 SV=1
Length = 111
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 14/85 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRLAR G K +PFYRV+ A++ +PRDG +DS +R+ L DRV+
Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVE 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPP 71
YWL GA+P+D V R + +AG+ P
Sbjct: 61 YWLKSGAKPTDRVARFIEQAGIALP 85
>sp|A8GY79|RS16_RICB8 30S ribosomal protein S16 OS=Rickettsia bellii (strain OSU
85-389) GN=rpsP PE=3 SV=1
Length = 111
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 14/85 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRLAR G K +PFYRV+ A++ +PRDG +DS +R+ L DRV+
Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVE 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPP 71
YWL GA+P+D V R + +AG+ P
Sbjct: 61 YWLKSGAKPTDRVARFIEQAGIALP 85
>sp|A4WNX7|RS16_RHOS5 30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=rpsP PE=3 SV=1
Length = 116
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P Y ++A+DSR PRDG +DS R+ +N +RV+
Sbjct: 1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNVERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
YWLS GAQP+D V R L AGL
Sbjct: 61 YWLSQGAQPTDRVARFLEAAGL 82
>sp|A9HS66|RS16_GLUDA 30S ribosomal protein S16 OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsP PE=3 SV=1
Length = 113
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ--------------DSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y ++ ADSRSPRDG+ D R+ L +R+
Sbjct: 1 MSLKIRLARAGAKKRPYYHIVIADSRSPRDGRFIEKVGAYNPMLPSDHADRVRLVNERIT 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPR 84
+WLS GA P+D V R L AGL P P +K P+
Sbjct: 61 HWLSQGALPTDRVARFLGNAGLAPKPAYTEQPKKSAPK 98
>sp|Q68VN6|RS16_RICTY 30S ribosomal protein S16 OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rpsP PE=3 SV=1
Length = 111
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRLAR G K +PFYRV+ A++ +PRDG D+ +R+ L DR++
Sbjct: 1 MAVKIRLARGGAKKRPFYRVVIANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIE 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL-LPPPPMVAMGRKGGPRDTRP 88
YWLS GA+P++ V + + +AG+ LP M K R RP
Sbjct: 61 YWLSTGAKPTERVAKFIEKAGVTLPKNVKKEMEVKAKNRKVRP 103
>sp|A7HT06|RS16_PARL1 30S ribosomal protein S16 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rpsP PE=3 SV=1
Length = 141
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +PFYRV+ AD+RSPRDG +D+ +R+ ++ +R K
Sbjct: 1 MALKIRLARGGAKKRPFYRVVIADTRSPRDGRFIEKIGTFNPLLPKDNAERIKVDIERAK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+WLSVGA P+D V R L AG+
Sbjct: 61 HWLSVGALPTDRVARFLDDAGV 82
>sp|B9JUC4|RS16_AGRVS 30S ribosomal protein S16 OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=rpsP PE=3 SV=1
Length = 123
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y+++ AD+RSPRDG +D+ KR+ LN DR+K
Sbjct: 1 MSLKIRLARGGSKKRPYYQIVIADARSPRDGRFLEKVGSWNPMLGKDNEKRVELNADRIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
W++ GAQP+D V + L AGL
Sbjct: 61 EWIAKGAQPTDRVLKFLAEAGL 82
>sp|A8F0A2|RS16_RICCK 30S ribosomal protein S16 OS=Rickettsia canadensis (strain McKiel)
GN=rpsP PE=3 SV=1
Length = 111
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRLAR G K +PFYRV+ A++ +PRDG D+ +R+ L DR++
Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIE 60
Query: 47 YWLSVGAQPSDPVQRILFRAG-LLPPPPMVAMGRKGGPRDTRP 88
YWLS GA+P++ V + + +AG +LP M K R RP
Sbjct: 61 YWLSTGAKPTERVAKFIEQAGVILPEKVKKEMAVKAKNRKPRP 103
>sp|B9JCL9|RS16_AGRRK 30S ribosomal protein S16 OS=Agrobacterium radiobacter (strain
K84 / ATCC BAA-868) GN=rpsP PE=3 SV=1
Length = 120
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y V+ AD+RSPRDG +D KR+ L+ DR+K
Sbjct: 1 MALKIRLARGGSKKRPYYHVVIADARSPRDGRFLEKVGSWNPMLAKDDAKRVELDADRIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+WL GAQP+D V R L AG+
Sbjct: 61 HWLDNGAQPTDRVLRFLDEAGV 82
>sp|A5G0H0|RS16_ACICJ 30S ribosomal protein S16 OS=Acidiphilium cryptum (strain JF-5)
GN=rpsP PE=3 SV=1
Length = 114
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ--------------DSGKRMGLNFDRVK 46
M ++IRLAR G K +PFY ++ ADSRSPRDG+ D R+ L DRV
Sbjct: 1 MSLKIRLARAGAKKRPFYHIVVADSRSPRDGKFIERIGTYNPMLPADHEDRIRLVTDRVT 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPP 72
+WLS GAQ +D V R + +AGL P P
Sbjct: 61 HWLSQGAQATDRVARFIGKAGLAPMP 86
>sp|Q3IZ02|RS16_RHOS4 30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpsP PE=3 SV=1
Length = 116
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P Y ++A+DSR PRDG +DS R+ +N +RV+
Sbjct: 1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
YWL+ GAQP+D V R L AGL
Sbjct: 61 YWLAQGAQPTDRVARFLEAAGL 82
>sp|A3PN95|RS16_RHOS1 30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rpsP PE=3 SV=1
Length = 116
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P Y ++A+DSR PRDG +DS R+ +N +RV+
Sbjct: 1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
YWL+ GAQP+D V R L AGL
Sbjct: 61 YWLAQGAQPTDRVARFLEAAGL 82
>sp|A6UE43|RS16_SINMW 30S ribosomal protein S16 OS=Sinorhizobium medicae (strain
WSM419) GN=rpsP PE=3 SV=1
Length = 124
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 14/86 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y+++ AD+RSPRDG +D KR+ LN +RV+
Sbjct: 1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPP 72
+W+ GAQP+D V R L +AGL P
Sbjct: 61 HWIDQGAQPTDRVLRFLDQAGLAKRP 86
>sp|Q2K382|RS16_RHIEC 30S ribosomal protein S16 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rpsP PE=3 SV=1
Length = 122
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y V+ AD+RSPRDG +D KR+ LN +R+K
Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+WL GAQP+D V R L AG+
Sbjct: 61 HWLDNGAQPTDRVLRFLNEAGV 82
>sp|B3PR16|RS16_RHIE6 30S ribosomal protein S16 OS=Rhizobium etli (strain CIAT 652)
GN=rpsP PE=3 SV=1
Length = 123
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y V+ AD+RSPRDG +D KR+ LN +R+K
Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+WL GAQP+D V R L AG+
Sbjct: 61 HWLDNGAQPTDRVLRFLNEAGV 82
>sp|Q1MAK5|RS16_RHIL3 30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rpsP PE=3 SV=1
Length = 123
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y V+ AD+RSPRDG +D KR+ LN +R+K
Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+W+ GAQP+D V R L AG+
Sbjct: 61 HWIEHGAQPTDRVLRFLDEAGV 82
>sp|Q28UE6|RS16_JANSC 30S ribosomal protein S16 OS=Jannaschia sp. (strain CCS1) GN=rpsP
PE=3 SV=1
Length = 130
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 14/84 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +PFYR++A+DSR PRDG +DS R+ ++ +RV+
Sbjct: 1 MAMKIRLARGGSKKRPFYRIVASDSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDMERVQ 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLP 70
+WL GAQP+D + R L AG P
Sbjct: 61 HWLDQGAQPTDRISRFLEAAGHTP 84
>sp|B5ZTH8|RS16_RHILW 30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=rpsP PE=3 SV=1
Length = 123
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y V+ AD+RSPRDG +D KR+ LN +R+K
Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL 68
+W+ GAQP+D V R L AG+
Sbjct: 61 HWIENGAQPTDRVLRFLDEAGV 82
>sp|B0K9W7|RS16_THEP3 30S ribosomal protein S16 OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=rpsP PE=3 SV=1
Length = 86
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQDSGK-----------RMGLNFDRVKYWL 49
M VRIRL RFG K +PFYR++ ADSRSPRDG+ + + ++ ++ K WL
Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAQPAEIKIDVEKAKKWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
SVGAQPSD V+ + + G++
Sbjct: 61 SVGAQPSDTVKSLFKKEGII 80
>sp|B0K1V0|RS16_THEPX 30S ribosomal protein S16 OS=Thermoanaerobacter sp. (strain X514)
GN=rpsP PE=3 SV=1
Length = 86
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQDSGK-----------RMGLNFDRVKYWL 49
M VRIRL RFG K +PFYR++ ADSRSPRDG+ + + ++ ++ K WL
Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAQPAEIKIDVEKAKKWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
SVGAQPSD V+ + + G++
Sbjct: 61 SVGAQPSDTVKSLFKKEGII 80
>sp|B2ING0|RS16_STRPS 30S ribosomal protein S16 OS=Streptococcus pneumoniae (strain
CGSP14) GN=rpsP PE=3 SV=1
Length = 95
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSRSPRDG+ + ++ L DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAENQVTLKEDRVLAWL 60
Query: 50 SVGAQPSDPVQRILFRAGLLPPPPMV 75
+ GAQPSD V+ IL + G+L ++
Sbjct: 61 ANGAQPSDTVRNILSKEGVLKKSTIL 86
>sp|Q8R9X1|RS16_THETN 30S ribosomal protein S16 OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=rpsP PE=3 SV=1
Length = 82
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQDSGK-----------RMGLNFDRVKYWL 49
M VRIRL RFG K +PFYR++ ADSRSPRDG+ + + ++ ++ K WL
Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAEPAEIKIDVEKAKKWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
SVGAQPSD V+ + + G++
Sbjct: 61 SVGAQPSDTVKSLFRKEGII 80
>sp|P82915|RT16_BOVIN 28S ribosomal protein S16, mitochondrial OS=Bos taurus GN=MRPS16
PE=1 SV=2
Length = 135
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 14/87 (16%)
Query: 3 VRIRLARFGCKNKPFYRVMAADSRSPRDGQ--------------DSGKRMGLNFDRVKYW 48
+ IRLA GC N+PFYR++AA ++ PRDG+ K + LN DR+++W
Sbjct: 17 LTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPMPNSHGEKLVALNLDRIRHW 76
Query: 49 LSVGAQPSDPVQRILFRAGLLPPPPMV 75
+ GA S PV+++L +G P PMV
Sbjct: 77 IGCGAHLSKPVEKLLGLSGFFPLHPMV 103
>sp|Q5FUG0|RS16_GLUOX 30S ribosomal protein S16 OS=Gluconobacter oxydans (strain 621H)
GN=rpsP PE=3 SV=1
Length = 115
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ--------------DSGKRMGLNFDRVK 46
M ++IRLAR G K +P+Y ++ ADSRSPRDG+ D R+ L +R+K
Sbjct: 1 MSLKIRLARAGAKKRPYYHIVVADSRSPRDGRFIEKVGSYNPMLPADHADRIRLVDERIK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPR 84
+WLS GA +D V R L AGL P P +K P+
Sbjct: 61 HWLSNGALATDRVARFLGNAGLAPKPTYNEQPKKSAPK 98
>sp|B5XKW7|RS16_STRPZ 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|P0DE77|RS16_STRPQ 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q48U63|RS16_STRPM 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|A2RF55|RS16_STRPG 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M5
(strain Manfredo) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q1J786|RS16_STRPF 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M4
(strain MGAS10750) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q1JHG4|RS16_STRPD 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M2
(strain MGAS10270) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q1JMC0|RS16_STRPC 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M12
(strain MGAS9429) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q1JCE0|RS16_STRPB 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M12
(strain MGAS2096) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|P66448|RS16_STRP8 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|Q5XCR1|RS16_STRP6 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|P0DE76|RS16_STRP3 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|P66446|RS16_STRP1 30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M1
GN=rpsP PE=3 SV=1
Length = 90
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSR+PRDG+ + ++ + DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQITIKEDRVLEWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
S GAQPSD V+ IL +AG++
Sbjct: 61 SKGAQPSDTVRNILSKAGVM 80
>sp|A8IKU6|RS16_AZOC5 30S ribosomal protein S16 OS=Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / ORS 571) GN=rpsP PE=3 SV=1
Length = 121
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M ++IRLAR G K +P+YR++ AD+RSPRDG +D+ +R+ L+ ++ K
Sbjct: 1 MSLKIRLARGGAKKRPYYRIVVADARSPRDGRFIEKIGTFNPLLAKDAAERVTLDTEKAK 60
Query: 47 YWLSVGAQPSDPVQRILFRAGLL 69
WL GAQP+D V R L AGLL
Sbjct: 61 AWLEKGAQPTDRVARFLDAAGLL 83
>sp|B5E375|RS16_STRP4 30S ribosomal protein S16 OS=Streptococcus pneumoniae serotype
19F (strain G54) GN=rpsP PE=3 SV=1
Length = 90
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 11/80 (13%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGQ-----------DSGKRMGLNFDRVKYWL 49
M V+IRL R G K KPFYR+ ADSRSPRDG+ + ++ L DRV WL
Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAENQVTLKEDRVLTWL 60
Query: 50 SVGAQPSDPVQRILFRAGLL 69
+ GAQPSD V+ IL + G+L
Sbjct: 61 ANGAQPSDTVRNILSKEGVL 80
>sp|Q4UJQ3|RS16_RICFE 30S ribosomal protein S16 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=rpsP PE=3 SV=1
Length = 111
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 15/103 (14%)
Query: 1 MVVRIRLARFGCKNKPFYRVMAADSRSPRDG--------------QDSGKRMGLNFDRVK 46
M V+IRLAR G K +PFYRV+ A++ +PRDG D+ +R+ L DR++
Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIE 60
Query: 47 YWLSVGAQPSDPVQRILFRAGL-LPPPPMVAMGRKGGPRDTRP 88
YWL GA+P++ V + + +AG+ LP M K R RP
Sbjct: 61 YWLGTGAKPTERVAKFIEQAGVTLPEKVKKEMEVKAKNRKVRP 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,837,519
Number of Sequences: 539616
Number of extensions: 1963137
Number of successful extensions: 5681
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4031
Number of HSP's gapped (non-prelim): 869
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)