Query 033532
Match_columns 117
No_of_seqs 144 out of 1090
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:52:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 5.4E-42 1.8E-46 237.2 14.5 116 1-117 1-116 (165)
2 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-41 3.8E-46 239.1 12.2 117 1-117 3-119 (183)
3 3h8k_A Ubiquitin-conjugating e 100.0 5.4E-41 1.8E-45 231.9 14.1 114 4-117 2-115 (164)
4 2awf_A Ubiquitin-conjugating e 100.0 7.8E-41 2.7E-45 232.8 12.0 115 3-117 15-129 (172)
5 2fo3_A Ubiquitin-conjugating e 100.0 5.8E-40 2E-44 218.0 11.4 100 4-117 5-105 (125)
6 1ayz_A UBC2, ubiquitin-conjuga 100.0 9.5E-40 3.2E-44 226.8 11.9 102 1-117 1-102 (169)
7 4gpr_A Ubiquitin-conjugating e 100.0 3.3E-39 1.1E-43 220.4 12.5 101 3-117 2-102 (151)
8 2aak_A UBC1, ubiquitin conjuga 100.0 2.8E-39 9.6E-44 220.9 12.0 102 1-117 1-102 (152)
9 2h2y_A Ubiquitin-conjugating e 100.0 3.1E-39 1.1E-43 217.3 12.0 100 4-117 19-119 (136)
10 1zdn_A Ubiquitin-conjugating e 100.0 3.6E-39 1.2E-43 221.7 11.6 102 2-117 10-111 (158)
11 2e2c_A Ubiquitin conjugating e 100.0 2.8E-39 9.6E-44 221.8 10.9 100 4-117 8-107 (156)
12 1z2u_A Ubiquitin-conjugating e 100.0 4E-39 1.4E-43 219.7 11.4 101 3-117 2-102 (150)
13 2a7l_A Hypothetical ubiquitin- 100.0 2E-39 6.8E-44 218.2 9.4 97 7-117 24-124 (136)
14 2ayv_A Ubiquitin-conjugating e 100.0 5.4E-39 1.8E-43 222.4 11.8 100 4-117 20-119 (166)
15 2c4o_A Ubiquitin-conjugating e 100.0 8.4E-39 2.9E-43 221.3 12.8 101 3-117 17-117 (165)
16 2c2v_B Ubiquitin-conjugating e 100.0 1.8E-39 6.1E-44 222.4 8.6 100 4-117 4-103 (154)
17 1yh2_A HSPC150 protein similar 100.0 1.9E-38 6.5E-43 220.2 12.6 105 3-117 2-106 (169)
18 2r0j_A Ubiquitin carrier prote 100.0 1.4E-38 4.6E-43 217.0 11.5 97 7-117 3-99 (149)
19 1i7k_A Ubiquitin-conjugating e 100.0 7.3E-39 2.5E-43 224.1 10.4 101 3-117 28-128 (179)
20 2gjd_A Ubiquitin-conjugating e 100.0 1.1E-38 3.7E-43 219.1 10.5 105 1-117 1-109 (157)
21 3rcz_B SUMO-conjugating enzyme 100.0 1.3E-38 4.5E-43 219.9 10.9 104 3-117 8-115 (163)
22 1fxt_A Ubiquitin-conjugating e 100.0 6.6E-39 2.3E-43 218.5 9.1 99 6-117 2-101 (149)
23 1jat_A Ubiquitin-conjugating e 100.0 7.6E-39 2.6E-43 219.4 9.1 99 5-117 5-103 (155)
24 2bep_A Ubiquitin-conjugating e 100.0 3.5E-38 1.2E-42 216.9 12.1 102 2-117 5-110 (159)
25 2grr_A Ubiquitin-conjugating e 100.0 3.1E-38 1.1E-42 217.6 11.2 104 3-117 5-112 (161)
26 3bzh_A Ubiquitin-conjugating e 100.0 9.2E-38 3.2E-42 220.9 12.7 100 4-117 47-146 (194)
27 1yrv_A Ubiquitin-conjugating l 100.0 1.9E-38 6.5E-43 220.2 9.0 104 1-117 20-124 (169)
28 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.4E-38 2.5E-42 221.2 10.8 100 4-117 31-144 (193)
29 2pwq_A Ubiquitin conjugating e 100.0 5.2E-38 1.8E-42 225.2 9.5 101 3-117 21-122 (216)
30 1jat_B Ubiquitin-conjugating e 100.0 6.9E-38 2.4E-42 211.1 9.2 103 1-117 2-110 (138)
31 2a4d_A Ubiquitin-conjugating e 100.0 2.7E-37 9.2E-42 212.7 11.7 103 4-117 24-130 (160)
32 3k9o_A Ubiquitin-conjugating e 100.0 1.6E-37 5.5E-42 220.7 10.8 102 1-117 2-107 (201)
33 3fn1_B NEDD8-conjugating enzym 100.0 2.7E-37 9.3E-42 213.9 10.4 106 4-117 13-118 (167)
34 1wzv_A Ubiquitin-conjugating e 100.0 2.8E-37 9.7E-42 211.6 10.4 100 5-117 4-103 (155)
35 1tte_A Ubiquitin-conjugating e 100.0 4.1E-38 1.4E-42 225.6 4.9 100 5-117 2-102 (215)
36 2q0v_A Ubiquitin-conjugating e 100.0 5.3E-37 1.8E-41 210.5 9.7 100 4-117 20-125 (156)
37 2y9m_A Ubiquitin-conjugating e 100.0 1.6E-36 5.6E-41 211.0 11.8 103 3-117 4-119 (172)
38 1y8x_A Ubiquitin-conjugating e 100.0 8.7E-37 3E-41 210.2 10.2 98 4-117 5-102 (160)
39 3e46_A Ubiquitin-conjugating e 100.0 2E-36 7E-41 221.3 12.1 101 3-117 55-159 (253)
40 4ds2_A Ubiquitin-conjugating e 100.0 2.2E-37 7.6E-42 214.4 6.0 102 1-117 5-120 (167)
41 1c4z_D UBCH7, ubiquitin conjug 100.0 4.8E-37 1.6E-41 210.2 7.4 99 6-117 3-101 (154)
42 2nvu_C NEDD8-conjugating enzym 100.0 1.2E-36 4.1E-41 213.0 9.5 99 3-117 24-122 (180)
43 2hlw_A Ubiquitin-conjugating e 100.0 8.8E-37 3E-41 212.0 7.2 103 4-117 34-140 (170)
44 2z5d_A Ubiquitin-conjugating e 100.0 3.1E-36 1.1E-40 210.7 7.6 95 5-117 25-120 (179)
45 2onu_A Ubiquitin-conjugating e 100.0 8.9E-37 3E-41 208.6 4.2 96 5-117 2-98 (152)
46 1yf9_A Ubiquitin carrier prote 100.0 7.5E-36 2.6E-40 207.5 7.4 95 5-117 12-107 (171)
47 2f4w_A Ubiquitin-conjugating e 100.0 3.4E-35 1.2E-39 206.7 10.6 102 3-117 12-113 (187)
48 1zuo_A Hypothetical protein LO 100.0 9.7E-36 3.3E-40 209.3 7.0 103 2-117 24-142 (186)
49 4ddg_A Ubiquitin-conjugating e 100.0 6.9E-35 2.4E-39 225.0 11.9 100 4-117 2-101 (399)
50 3o2u_A NEDD8-conjugating enzym 100.0 7.5E-35 2.6E-39 205.4 9.9 98 4-117 28-131 (190)
51 3ceg_A Baculoviral IAP repeat- 100.0 8E-34 2.7E-38 213.1 12.0 109 2-117 73-191 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 1.8E-30 6E-35 177.9 -2.3 83 6-95 33-126 (172)
53 3kpa_A Probable ubiquitin fold 99.8 1.3E-22 4.5E-27 136.5 -0.4 82 6-94 35-127 (168)
54 3r3q_A Suppressor protein STP2 99.7 5.3E-17 1.8E-21 111.4 6.1 87 8-95 31-134 (162)
55 3obq_A Tumor susceptibility ge 99.4 1.7E-13 6E-18 92.5 4.8 81 10-95 25-116 (146)
56 2ebm_A RWD domain-containing p 97.1 0.0046 1.6E-07 39.8 8.4 68 6-76 11-78 (128)
57 2yz0_A Serine/threonine-protei 96.4 0.058 2E-06 34.9 10.0 68 7-77 12-86 (138)
58 2day_A Ring finger protein 25; 96.3 0.016 5.4E-07 37.2 6.8 69 8-77 11-83 (128)
59 2ebk_A RWD domain-containing p 95.5 0.03 1E-06 35.9 5.4 67 9-76 11-79 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 94.9 0.27 9.4E-06 31.5 8.7 67 7-76 12-86 (137)
61 2daw_A RWD domain containing p 94.8 0.21 7.1E-06 33.1 8.0 25 53-77 75-99 (154)
62 2dax_A Protein C21ORF6; RWD do 92.8 0.086 2.9E-06 34.8 3.2 25 53-77 73-97 (152)
63 3zqs_A E3 ubiquitin-protein li 91.3 0.62 2.1E-05 32.1 6.2 57 9-77 5-62 (186)
64 3u3c_B Paxillin LD2 peptide; 4 72.6 3.6 0.00012 18.6 2.3 21 5-25 5-25 (26)
65 2rf4_B DNA-directed RNA polyme 35.6 16 0.00056 21.9 1.4 12 6-17 63-74 (87)
66 3g9r_A Fusion complex of HIV-1 31.4 23 0.00078 18.0 1.3 14 5-18 28-41 (42)
67 2bum_A Protocatechuate 3,4-dio 30.9 44 0.0015 23.0 3.3 25 52-76 110-139 (209)
68 3pft_A Flavin reductase; desul 26.3 37 0.0013 21.9 2.1 29 68-96 43-74 (157)
69 3kxt_A Chromatin protein CREN7 25.0 50 0.0017 18.0 2.1 11 57-67 46-56 (56)
70 3rls_A YAF9, protein AF-9 homo 23.6 1.7E+02 0.0059 19.6 6.2 43 33-77 30-72 (175)
71 2ccv_A Helix pomatia agglutini 21.8 1.2E+02 0.0041 18.2 3.7 26 51-77 27-52 (101)
72 2c5k_P Vacuolar protein sortin 21.5 43 0.0015 15.3 1.2 15 5-19 10-24 (26)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-42 Score=237.18 Aligned_cols=116 Identities=55% Similarity=1.038 Sum_probs=109.5
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
|++ .+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 775 8999999999999999999999999866899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+.+|+|||++|..++.++++++...++|+|++||
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i 116 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSV 116 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcH
Confidence 9999999999999988888889988888999999985
No 2
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.1e-41 Score=239.10 Aligned_cols=117 Identities=52% Similarity=1.075 Sum_probs=97.8
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
||++.+.+||++|++++++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 88889999999999999999999999996668899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+++|+|||++|.+.+.++++.+...++|+|++||
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i 119 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV 119 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcH
Confidence 9999999999999988788888888888999999985
No 3
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.4e-41 Score=231.90 Aligned_cols=114 Identities=56% Similarity=1.072 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|++++++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 36899999999999999999999999866699999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+||+++|...+.+.++++...++|+|++||
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti 115 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSV 115 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcH
Confidence 9999999999998888888998889999999985
No 4
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=7.8e-41 Score=232.81 Aligned_cols=115 Identities=60% Similarity=1.211 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
++.+.+||+||+++|++++++||++.+.+++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 45788999999999999999999999986689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|...+.+.++|+...++|+|++||
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti 129 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTV 129 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCH
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcH
Confidence 99999999999987777788888888999999985
No 5
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-40 Score=217.98 Aligned_cols=100 Identities=29% Similarity=0.650 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCC-cccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i-~HPn 82 (117)
+.+.+||++|+++++++++.|+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVH-PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeC-cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 357899999999999999999999985 78999999999999999999999999999999999999999999997 9999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+||+++|. ++|+|++||
T Consensus 84 v~~~G~iCl~iL~-------------~~W~P~~~i 105 (125)
T 2fo3_A 84 VYSNGDICLSLLG-------------DDYNPSLSI 105 (125)
T ss_dssp BCTTSBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCCEEEchhcC-------------CCCCCCCcH
Confidence 9999999999996 899999985
No 6
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.5e-40 Score=226.78 Aligned_cols=102 Identities=43% Similarity=0.860 Sum_probs=96.8
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
|++ .+.+||++|++++++++++||.+.+. ++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 1 Ms~-~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MST-PARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -CC-HHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 664 78999999999999999999999997 7899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+.+|+|||++|. ++|+|++||
T Consensus 79 PNI~~~G~ICl~iL~-------------~~WsP~~~i 102 (169)
T 1ayz_A 79 PNVYANGEICLDILQ-------------NRWTPTYDV 102 (169)
T ss_dssp TTBCTTSBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCCCCeEeehhhc-------------cCCCCcCcH
Confidence 999999999999997 899999975
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=3.3e-39 Score=220.42 Aligned_cols=101 Identities=36% Similarity=0.816 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
+..+.+||++|+++++++++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 4578999999999999999999999996 689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+||+++|. ++|+|++||
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i 102 (151)
T 4gpr_A 81 INKNGVICLDILK-------------DQWSPALTL 102 (151)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred ECCCCEEEccccc-------------CCCCCCCcH
Confidence 9999999999997 899999875
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.8e-39 Score=220.92 Aligned_cols=102 Identities=40% Similarity=0.884 Sum_probs=97.1
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
|++ .+.+||++|++++++++++||.+.+. ++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms~-~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MST-PARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CCC-HHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 654 78899999999999999999999986 7899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+.+|+||+++|. ++|+|++||
T Consensus 79 Pnv~~~G~iCl~iL~-------------~~W~p~~~i 102 (152)
T 2aak_A 79 PNIYADGSICLDILQ-------------NQWSPIYDV 102 (152)
T ss_dssp TTBCTTSBBCCGGGT-------------TSCCTTCCH
T ss_pred CCCCCCCEEechhhc-------------CCCCCCCcH
Confidence 999999999999996 899999875
No 9
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-39 Score=217.26 Aligned_cols=100 Identities=32% Similarity=0.673 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCC-cccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i-~HPn 82 (117)
+.+.+||++|+++++++++.|+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVH-PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEec-cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 357899999999999999999999985 78999999999999999999999999999999999999999999996 9999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+||+++|. ++|+|++||
T Consensus 98 v~~~G~ICl~iL~-------------~~WsP~~ti 119 (136)
T 2h2y_A 98 VYSNGDICLSVLG-------------DDYNPSLSI 119 (136)
T ss_dssp BCTTCCBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCCEEECcccc-------------CCCCCCCcH
Confidence 9999999999996 899999985
No 10
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-39 Score=221.71 Aligned_cols=102 Identities=29% Similarity=0.616 Sum_probs=97.0
Q ss_pred chHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccc
Q 033532 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (117)
Q Consensus 2 as~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HP 81 (117)
++..+.+||++|++++++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 88 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPN-EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHP 88 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccC
Confidence 35678899999999999999999999985 78999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 82 nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
||+.+|+|||++|. ++|+|++||
T Consensus 89 nv~~~G~iCl~iL~-------------~~W~p~~~i 111 (158)
T 1zdn_A 89 NVGANGEICVNVLK-------------RDWTAELGI 111 (158)
T ss_dssp TBCTTSBBCHHHHT-------------TTCCTTCCH
T ss_pred CCCCCCEEehhhcC-------------CCCCCCCcH
Confidence 99999999999996 899999875
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-39 Score=221.79 Aligned_cols=100 Identities=38% Similarity=0.745 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|++++++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 468899999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+|||++|. ++|+|++||
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i 107 (156)
T 2e2c_A 87 DQSGNICLDILK-------------ENWTASYDV 107 (156)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred ccCceEECcccc-------------ccCCCCCcH
Confidence 999999999997 899999875
No 12
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=4e-39 Score=219.74 Aligned_cols=101 Identities=40% Similarity=0.907 Sum_probs=96.3
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
|..+.+||++|++++++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 4568899999999999999999999996 689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|. ++|+|++||
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i 102 (150)
T 1z2u_A 81 INSNGSICLDILR-------------SQWSPALTI 102 (150)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCCeEeecccc-------------CCCCCCCCH
Confidence 9999999999997 899999875
No 13
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-39 Score=218.17 Aligned_cols=97 Identities=39% Similarity=0.780 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE--ecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCc--ccc
Q 033532 7 SLLLQKQLKDLCKNPVDGFSAG--LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW--HPN 82 (117)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~i~~~--~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~--HPn 82 (117)
.+||+||++++++++++||.+. + +++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| |||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 4999999999999999999865 5 4789999999999999999999999999999999999999999999999 999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|+ ++|+|++||
T Consensus 103 V~~~G~ICL~iL~-------------~~WsP~~ti 124 (136)
T 2a7l_A 103 VYSNGHICLSILT-------------EDWSPALSV 124 (136)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTSCH
T ss_pred CCCCCeEEchhcC-------------CCCCCCCcH
Confidence 9999999999997 899999985
No 14
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-39 Score=222.42 Aligned_cols=100 Identities=40% Similarity=0.899 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|+++++++++.||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 457899999999999999999999995 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+|||++|. ++|+|++||
T Consensus 99 ~~~G~ICL~iL~-------------~~WsP~~ti 119 (166)
T 2ayv_A 99 NSQGAICLDILK-------------DQWSPALTI 119 (166)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCeEEccccc-------------ccCCCCCcH
Confidence 999999999997 899999875
No 15
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=8.4e-39 Score=221.27 Aligned_cols=101 Identities=40% Similarity=0.890 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
.+.+.+||++|+++++++++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 3568899999999999999999999996 689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|. ++|+|++||
T Consensus 96 V~~~G~ICl~iL~-------------~~W~P~~ti 117 (165)
T 2c4o_A 96 INSNGSICLDILR-------------SQWSPALTI 117 (165)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCCeEeehhhc-------------CCCCCcCcH
Confidence 9999999999997 899999875
No 16
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-39 Score=222.38 Aligned_cols=100 Identities=35% Similarity=0.717 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
..+.+||++|++++++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 4 AGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 367799999999999999999999996 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+|||++|+ ++|+|++||
T Consensus 83 ~~~G~iCl~iL~-------------~~W~p~~~i 103 (154)
T 2c2v_B 83 DKLGRICLDILK-------------DKWSPALQI 103 (154)
T ss_dssp CTTCBBCCHHHH-------------TSCCTTCCH
T ss_pred ccCCeEEchhcc-------------CCCCCCCcH
Confidence 999999999997 899999875
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-38 Score=220.21 Aligned_cols=105 Identities=28% Similarity=0.641 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
|.++.+||++|+++++++++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcccc
Confidence 4678999999999999999999999985 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|+.. ..++|+|++||
T Consensus 81 v~~~G~iCl~iL~~~---------~~~~W~p~~~i 106 (169)
T 1yh2_A 81 IDSAGRICLDVLKLP---------PKGAWRPSLNI 106 (169)
T ss_dssp BCTTCBBCCGGGSCT---------TTSCCCTTSCH
T ss_pred CCcCCeEecccccCC---------cccCCCCCCcH
Confidence 999999999999621 12789999975
No 18
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.4e-38 Score=216.95 Aligned_cols=97 Identities=33% Similarity=0.744 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccCCC
Q 033532 7 SLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPD 86 (117)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~~~ 86 (117)
.+||++|++++++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 589999999999999999999996 7899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 87 GKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 87 G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+|||++|+ ++|+|++||
T Consensus 82 G~iCl~iL~-------------~~W~p~~~i 99 (149)
T 2r0j_A 82 GRICLDILK-------------DKWSPALQI 99 (149)
T ss_dssp CBBCCGGGT-------------TTCCTTSCH
T ss_pred CEEechhcC-------------CCCCCCCcH
Confidence 999999997 899999875
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.3e-39 Score=224.05 Aligned_cols=101 Identities=33% Similarity=0.613 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
++.+.+||++|++++++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 4568899999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|+|||++|. ++|+|++||
T Consensus 107 V~~~G~ICL~iL~-------------~~WsP~~ti 128 (179)
T 1i7k_A 107 VDTQGNISLDILK-------------EKWSALYDV 128 (179)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred cccCCeEEcccCc-------------CcCCCCCCH
Confidence 9999999999997 899999975
No 20
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.1e-38 Score=219.09 Aligned_cols=105 Identities=34% Similarity=0.719 Sum_probs=94.9
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCC----CCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEec
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDE----SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~----~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t 76 (117)
|++ .+.+||++|++++++++++|+.+.+.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSS-LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --C-HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 654 7889999999999999999999988632 48999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 77 ~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
++|||||+.+|+||+++|.. .++|+|++||
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i 109 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNE-----------DQDWRPAITL 109 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCT-----------TTTCCTTCCH
T ss_pred CCccCCCCCCCcEeeecccC-----------CCCCCCCCcH
Confidence 99999999999999999971 1389999875
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-38 Score=219.91 Aligned_cols=104 Identities=40% Similarity=0.824 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCC-C---CcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCC
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDE-S---NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~-~---~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i 78 (117)
|.++.+||+||++++++++++||.+.+.++ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 568999999999999999999999998733 1 899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 79 ~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||||+.+|+||+++|.. .++|+|++||
T Consensus 88 ~HPnV~~~G~iCl~iL~~-----------~~~W~p~~ti 115 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNE-----------EEGWKPAITI 115 (163)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCH
T ss_pred ccCCCCCCCcEeccccCC-----------CCCcCCcCcH
Confidence 999999999999999971 2479999985
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=6.6e-39 Score=218.45 Aligned_cols=99 Identities=31% Similarity=0.729 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccCC
Q 033532 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (117)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~~ 85 (117)
+.+||++|++++++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 46899999999999999999999975459999999999999999999999999999999999999999999999999998
Q ss_pred -CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 86 -DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 86 -~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+|+|||++|. ++|+|++||
T Consensus 82 ~~G~iCl~iL~-------------~~W~p~~~i 101 (149)
T 1fxt_A 82 VTGAICLDILK-------------NAWSPVITL 101 (149)
T ss_dssp SSCCBCCHHHH-------------TSCCTTCCH
T ss_pred CCCeEeCCcCC-------------CCCCCCCcH
Confidence 9999999997 899999875
No 23
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=7.6e-39 Score=219.45 Aligned_cols=99 Identities=31% Similarity=0.715 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
.+.+||++|++++++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 46799999999999999999999996 68999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
.+|+|||++|. ++|+|++||
T Consensus 84 ~~G~iCl~iL~-------------~~W~p~~~i 103 (155)
T 1jat_A 84 RLGRICLDVLK-------------TNWSPALQI 103 (155)
T ss_dssp TTCCBCCGGGT-------------TTCCTTCCH
T ss_pred CCCEEEchhhc-------------cCCCCCCCH
Confidence 99999999996 899999875
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.5e-38 Score=216.93 Aligned_cols=102 Identities=34% Similarity=0.773 Sum_probs=95.1
Q ss_pred chHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCC
Q 033532 2 AKSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (117)
Q Consensus 2 as~~~~~RL~~E~~~l~~~---~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i 78 (117)
+++.+.+||++|+++++++ ++.|+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 3457899999999999985 5789999996 67999999999999999999999999999999999999999999999
Q ss_pred cccccCC-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 79 WHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 79 ~HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||||+. +|+|||++|. ++|+|++||
T Consensus 84 ~HPni~~~~G~iCl~iL~-------------~~W~p~~~i 110 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK-------------DQWAAAMTL 110 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CccCCCCCCCEEeChhhh-------------ccCCCCCcH
Confidence 9999995 9999999997 889999875
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.1e-38 Score=217.63 Aligned_cols=104 Identities=38% Similarity=0.721 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecC----CCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCC
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVD----ESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~----~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i 78 (117)
++.+.+||++|++++++++++|+.+.+.. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 5 ~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 84 (161)
T 2grr_A 5 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL 84 (161)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCc
Confidence 45789999999999999999999998862 36899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 79 ~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||||+.+|+||+++|.. .++|+|++||
T Consensus 85 ~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i 112 (161)
T 2grr_A 85 FHPNVYPSGTVCLSILEE-----------DKDWRPAITI 112 (161)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCH
T ss_pred ccCCCCCCCeEeehhcCC-----------CCCcCCCCcH
Confidence 999999999999999971 1489999875
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=9.2e-38 Score=220.87 Aligned_cols=100 Identities=38% Similarity=0.838 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 467899999999999999999999996 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|.|||++|. ++|+|+++|
T Consensus 126 ~~~G~ICL~iL~-------------~~WsP~~ti 146 (194)
T 3bzh_A 126 NSQGVICLDILK-------------DNWSPALTI 146 (194)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCceechhhh-------------ccCCCcCcH
Confidence 999999999996 899999875
No 27
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-38 Score=220.20 Aligned_cols=104 Identities=34% Similarity=0.657 Sum_probs=96.5
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
|+ +.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 M~-~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 20 MH-GRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp GG-CHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred cC-hHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 44 478999999999999999999999986 7899999999999999999999999999999999999999999999999
Q ss_pred ccc-CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv-~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
||| +.+|+|||++|+. .++|+|++||
T Consensus 98 PNI~~~~G~ICL~iL~~-----------~~~WsP~~ti 124 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDN-----------PEKWNTNYTL 124 (169)
T ss_dssp TTBCTTTCCBCCHHHHC-----------GGGCCTTCCH
T ss_pred CcccCCCCeEeehhhcC-----------CcCCCCcCCH
Confidence 999 8899999999951 1789999875
No 28
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.4e-38 Score=221.19 Aligned_cols=100 Identities=35% Similarity=0.787 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHhhCCC-------------CCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCC
Q 033532 4 SQASLLLQKQLKDLCKNPV-------------DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPP 70 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~-------------~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP 70 (117)
..+.+||++|+++++++++ .||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 3577899999999999887 79999997 689999999999999999999999999999999999999
Q ss_pred EEEEecCCcccccC-CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 71 TVRFTSEMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 71 ~v~f~t~i~HPnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+|+|.|+||||||+ .+|+|||++|. ++|+|++||
T Consensus 110 ~V~F~T~i~HPNI~~~~G~ICL~iL~-------------~~WsP~~ti 144 (193)
T 2f4z_A 110 KMKFVTKIWHPNISSQTGAICLDILK-------------HEWSPALTI 144 (193)
T ss_dssp EEEESSCCCBTTBCTTTCBBCCGGGT-------------TTCCTTSCH
T ss_pred eEEEecCCccCCCcCCCCEEECcccc-------------ccCCCCCCH
Confidence 99999999999999 59999999997 889999985
No 29
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=5.2e-38 Score=225.24 Aligned_cols=101 Identities=41% Similarity=0.877 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
++.+.+||++|++++++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 3578899999999999999999999997 789999999999999999999999999999999999999999999999999
Q ss_pred cCC-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYP-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+. +|+|||++|. ++|+|++||
T Consensus 100 I~~~~G~ICL~iL~-------------~~WsP~~ti 122 (216)
T 2pwq_A 100 ISSQTGAICLDVLK-------------NEWSPALTI 122 (216)
T ss_dssp BCTTTCBBCCHHHH-------------HHCCTTCCH
T ss_pred CcCCCCEEEchhhc-------------ccCCCCCcH
Confidence 994 8999999997 889999975
No 30
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=6.9e-38 Score=211.08 Aligned_cols=103 Identities=31% Similarity=0.527 Sum_probs=91.4
Q ss_pred CchHHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 1 MAKSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~-~~~~i~~~~~~~~--~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
|+...+.+||+||+++++++ ++.|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 77667889999999999998 7889999986444 49999999999999999999999999999999999999999999
Q ss_pred CcccccCCC-CcE--EeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 78 MWHPNVYPD-GKV--CISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 78 i~HPnv~~~-G~i--Cl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
||||||+.+ |+| ||++| ++|+|++||
T Consensus 82 i~HPnv~~~~G~i~~cL~~l--------------~~W~p~~~i 110 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTL--------------RDWKRAYTM 110 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHH--------------HTCCTTCCH
T ss_pred cccCCEeCCCCEEeeecccC--------------CCCCCcCcH
Confidence 999999996 999 99998 469999875
No 31
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.7e-37 Score=212.67 Aligned_cols=103 Identities=28% Similarity=0.513 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--cceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~-i~~~~~~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
..+.+||+||++++++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 568899999999999999888 7787755665 8999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+ .+|+||+++|+. .++|+|++||
T Consensus 104 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti 130 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISV-----------LAKWQNSYSI 130 (160)
T ss_dssp TTBCTTTCBBCGGGSHH-----------HHTCCTTCCH
T ss_pred CCEECCCCEEehhhcCC-----------ccCCCccCcH
Confidence 9999 699999999951 1789999975
No 32
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.6e-37 Score=220.68 Aligned_cols=102 Identities=36% Similarity=0.795 Sum_probs=94.1
Q ss_pred CchHHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 1 MAKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~---~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
|++ .+.+||++|+++++++. +.||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 Ms~-~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 2 MAN-IAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp --C-TTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcH-HHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 553 78999999999999873 689999997 6899999999999999999999999999999999999999999999
Q ss_pred CcccccCC-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 78 MWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 78 i~HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
||||||+. +|+|||++|. ++|+|++||
T Consensus 80 i~HPnv~~~~G~iCl~iL~-------------~~W~p~~~i 107 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILK-------------DQWAAAMTL 107 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred cccCCCcCCCCeeeCcccc-------------cCCCCCCCH
Confidence 99999995 9999999997 899999975
No 33
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.7e-37 Score=213.92 Aligned_cols=106 Identities=27% Similarity=0.595 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|++++++++++||++.+.+++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 468899999999999999999999977678999999999 8999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+|||++|... +.+.++|+|++||
T Consensus 92 ~~~G~iCl~iL~~~-------~~~~~~W~p~~~i 118 (167)
T 3fn1_B 92 TETGEICLSLLREH-------SIDGTGWAPTRTL 118 (167)
T ss_dssp CTTCCBCCGGGSBC-------SSSTTSBCTTCCH
T ss_pred CCCCEEechhhccC-------CCCCCCCCCcCcH
Confidence 99999999999721 2234689999875
No 34
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.8e-37 Score=211.57 Aligned_cols=100 Identities=34% Similarity=0.732 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
.+.+||++|++++++++++||.+...+++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 368999999999999999999993335889999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
.+|+||+++|. .++|+|++||
T Consensus 83 ~~G~iCl~iL~------------~~~W~p~~~i 103 (155)
T 1wzv_A 83 ENGQICLPIIS------------SENWKPCTKT 103 (155)
T ss_dssp TTCBCCCGGGC------------TTTCCTTCCH
T ss_pred CCCeEeecCCC------------ccCCCCCCcH
Confidence 99999999993 2899999875
No 35
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.1e-38 Score=225.65 Aligned_cols=100 Identities=31% Similarity=0.722 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
.+.+||++|++++++++++||++.+.++++++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 36799999999999999999999997555677999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
. +|+|||++|. ++|+|++||
T Consensus 82 ~~~G~ICL~iL~-------------~~WsP~~ti 102 (215)
T 1tte_A 82 SVTGAICLDILR-------------NAWSPVITL 102 (215)
T ss_dssp SSSSCCCSSTTT-------------CCSCTTCCH
T ss_pred CCCCEEECccCC-------------CCCCCcCcH
Confidence 9 9999999997 899999985
No 36
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=5.3e-37 Score=210.50 Aligned_cols=100 Identities=32% Similarity=0.543 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 4 SQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~-~~~~i~~~~~~~~--~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
..+.+||++|+++++++ ++.|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 45789999999999998 7889999986444 59999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcE---EeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVYPDGKV---CISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~~~G~i---Cl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+.+|+| ||++|+ +|+|++||
T Consensus 100 PNV~~~G~icisCL~iL~--------------~WsP~~ti 125 (156)
T 2q0v_A 100 SCVDNCGRVIKNNLHILK--------------NWNRNYTI 125 (156)
T ss_dssp TTBCTTSBBCGGGSHHHH--------------TCCTTCCH
T ss_pred CCCccCCeEehhhccccc--------------CCCCcCcH
Confidence 999999999 889984 49999875
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.6e-36 Score=211.00 Aligned_cols=103 Identities=32% Similarity=0.612 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHHHhh-C-C------CC---CeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCE
Q 033532 3 KSQASLLLQKQLKDLCK-N-P------VD---GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPT 71 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~-~-~------~~---~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~ 71 (117)
++.+.+||++|++++++ + + +. ++.+.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+
T Consensus 4 s~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 4 ADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred cHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 45899999999999998 4 2 33 456667457899999999999999999999999999999999999999
Q ss_pred EEEec-CCcccccC-CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 72 VRFTS-EMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 72 v~f~t-~i~HPnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+|.| +||||||+ .+|+|||++|. .++|+|++||
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl~iL~------------~~~W~p~~~i 119 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICLNILK------------PEEWTPVWDL 119 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECCGGGS------------TTTCCTTCCH
T ss_pred EEEeeCCeecCCCcCCCCEEeccccC------------CCCCCCcCcH
Confidence 99999 99999995 79999999996 3899999875
No 38
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.7e-37 Score=210.22 Aligned_cols=98 Identities=32% Similarity=0.659 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|++++ ++++|+++...+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 36889999999999 56789999843588999999998 9999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+.+|+|||++|. ++|+|++||
T Consensus 82 ~~~G~iCl~iL~-------------~~W~p~~~i 102 (160)
T 1y8x_A 82 DLEGNVCLNILR-------------EDWKPVLTI 102 (160)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCH
T ss_pred CCCCeEEcccch-------------hhccCCCCH
Confidence 999999999997 899999875
No 39
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2e-36 Score=221.25 Aligned_cols=101 Identities=35% Similarity=0.783 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCc
Q 033532 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~---~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~ 79 (117)
++.+.+||++|+++|+++ ++.||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 457899999999999987 4689999997 689999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 80 HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
||||+. +|+|||++|. ++|+|++||
T Consensus 134 HPNV~~~~G~ICL~iL~-------------~~WsP~~ti 159 (253)
T 3e46_A 134 HPNISSVTGAICLDILK-------------DQWAAAMTL 159 (253)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TCCCTTCCH
T ss_pred cCCccCCCCeeeccccc-------------CCCCCCCCH
Confidence 999995 9999999997 899999975
No 40
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.2e-37 Score=214.44 Aligned_cols=102 Identities=26% Similarity=0.577 Sum_probs=95.3
Q ss_pred CchHHHHHHHHHHHHHHhhCC------------CCCeEEEecCCCCcceEEEEEeCCCCCCCC--CcEEEEEEecCCCCC
Q 033532 1 MAKSQASLLLQKQLKDLCKNP------------VDGFSAGLVDESNVFEWSVSIIGPPDTLYE--GGFFNAIMTFPDNYP 66 (117)
Q Consensus 1 Mas~~~~~RL~~E~~~l~~~~------------~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~--g~~f~~~i~~p~~YP 66 (117)
|++ .+.+||++|++++++++ +.++.+.+. ++|+++|+++|.||++|||+ ||.|+++|.||++||
T Consensus 5 Ms~-~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 5 MKN-ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVD-TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp CCC-CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred ccH-HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeC-CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 554 68899999999999977 678899885 78999999999999999999 999999999999999
Q ss_pred CCCCEEEEecCCcccccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 67 VSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 67 ~~pP~v~f~t~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
++||+|+|.|++|||||+.+|+||+++|. ++|+|++||
T Consensus 83 ~~pP~v~f~t~i~HPnv~~~G~iCl~il~-------------~~W~p~~~i 120 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVTGEGGICDRMVN-------------DFWTPDQHA 120 (167)
T ss_dssp TSCCEEEESSCCCCSSCCTTSCCCTHHHH-------------TTCCTTSCH
T ss_pred CCCCEEEEeCCcccccCCCCCEEEcccCc-------------CCCCCCCCh
Confidence 99999999999999999999999999997 899999974
No 41
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=4.8e-37 Score=210.25 Aligned_cols=99 Identities=33% Similarity=0.755 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccCC
Q 033532 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (117)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~~ 85 (117)
+.+||++|++++++++++|+.+.+.+++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 57899999999999999999877666789999999998 99999999999999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 86 DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 86 ~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+|+|||++|. .++|+|++||
T Consensus 82 ~G~iCl~iL~------------~~~W~p~~~i 101 (154)
T 1c4z_D 82 KGQVCLPVIS------------AENWKPATKT 101 (154)
T ss_dssp TCBBCCTTTS------------SSSCCTTCCH
T ss_pred CCEEECCCCC------------CCCCCCCCcH
Confidence 9999999996 3899999975
No 42
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-36 Score=213.03 Aligned_cols=99 Identities=30% Similarity=0.615 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
++.+.+||++|++++ ++++|+++...+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 356889999999999 57789999844588999999998 999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+.+|.||+++|. ++|+|++||
T Consensus 101 V~~~G~iCl~iL~-------------~~W~p~~~i 122 (180)
T 2nvu_C 101 IDLEGNVALNILR-------------EDWKPVLTI 122 (180)
T ss_dssp BCTTSBBCCGGGT-------------TSCCTTCCH
T ss_pred CCCCCcEEccccc-------------ccCCCCCCH
Confidence 9999999999997 899999975
No 43
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=211.98 Aligned_cols=103 Identities=28% Similarity=0.513 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--cceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcc
Q 033532 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~-i~~~~~~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~H 80 (117)
..+.+||++|++++++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 347899999999999999888 6777755555 9999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 81 Pnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|||+ .+|+||+++|+. .++|+|++||
T Consensus 114 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti 140 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISV-----------LAKWQNSYSI 140 (170)
T ss_dssp SSBCSSSCBBCTTTCHH-----------HHTCCSSCCH
T ss_pred CCEeCCCCEEEhhhcCC-----------CCCCCccCcH
Confidence 9998 699999999951 1789999985
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=210.66 Aligned_cols=95 Identities=25% Similarity=0.656 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
.+.+||++|++++++ .|+.+.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 588999999999985 57888886 4789999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
. +|+|||++|. ++|+|++||
T Consensus 100 ~~~G~ICL~iL~-------------~~WsP~~ti 120 (179)
T 2z5d_A 100 EASGTVCLDVIN-------------QTWTALYDL 120 (179)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCT
T ss_pred CCCCeEeccccc-------------cCCCCCCCH
Confidence 9 9999999997 899999986
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=8.9e-37 Score=208.64 Aligned_cols=96 Identities=30% Similarity=0.687 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
.+.+||+||+++++++ |+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 3568999999999874 7888886 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
. +|+||+++|. ++|+|++||
T Consensus 78 ~~~G~iCl~il~-------------~~W~p~~~i 98 (152)
T 2onu_A 78 EASGSVCLDVIN-------------QTWTPLYSL 98 (152)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCH
T ss_pred CcCCeEeccccc-------------ccCCCCCCH
Confidence 5 9999999997 899999875
No 46
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=7.5e-36 Score=207.48 Aligned_cols=95 Identities=27% Similarity=0.608 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccccC
Q 033532 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv~ 84 (117)
++.+||++|++++++++. ++ .. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 567999999999999873 43 33 68999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
. +|+|||++|. ++|+|++||
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i 107 (171)
T 1yf9_A 87 ERSGSVCLDVIN-------------QTWTPMYQL 107 (171)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCT
T ss_pred ccCCeEeccccc-------------cCCCCCCcH
Confidence 5 9999999997 899999986
No 47
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-35 Score=206.75 Aligned_cols=102 Identities=27% Similarity=0.613 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCcccc
Q 033532 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (117)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPn 82 (117)
++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~ 88 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGR 88 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSS
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cce
Confidence 3467899999999999999999999986 7899999999999999999999999999999999999999999999 999
Q ss_pred cCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
|+++|+|||++|. ++ .++|+|++||
T Consensus 89 ~~~~G~ICL~iL~------~~----~~~W~P~~ti 113 (187)
T 2f4w_A 89 FKCNTRLCLSITD------FH----PDTWNPAWSV 113 (187)
T ss_dssp BCTTSCBC--------------------CCTTCCH
T ss_pred eccCCeEeeeccc------cC----ccCCCCcCcH
Confidence 9999999999994 11 2899999985
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=9.7e-36 Score=209.35 Aligned_cols=103 Identities=25% Similarity=0.553 Sum_probs=95.4
Q ss_pred chHHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCcceEEEEEeCC-CCCCCCC-----------cEEEEEEecCCCCC
Q 033532 2 AKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGP-PDTLYEG-----------GFFNAIMTFPDNYP 66 (117)
Q Consensus 2 as~~~~~RL~~E~~~l~~~~---~~~i~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------~~f~~~i~~p~~YP 66 (117)
++..+.+||++|++++++++ +.++++.+. ++|+++|+++|.|| ++|||+| |.|+++|.||++||
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 45678999999999999988 678999987 68999999999997 9999998 89999999999999
Q ss_pred CCCCEEEEecCCccc-ccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 67 VSPPTVRFTSEMWHP-NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 67 ~~pP~v~f~t~i~HP-nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
++||+|+|.|++||| ||+.+|+|||++|. .++|+|++||
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~------------~~~WsP~~ti 142 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLT------------KQGWSSAYSI 142 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGS------------TTTCCTTSCH
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCC------------CCCCCCcCcH
Confidence 999999999999999 69999999999996 3799999985
No 49
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.9e-35 Score=224.95 Aligned_cols=100 Identities=38% Similarity=0.861 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecCCccccc
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~i~HPnv 83 (117)
+.+.+||++|++++++++++|+++.+. ++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccccc
Confidence 368999999999999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+++|+||+++|. ++|+|++||
T Consensus 81 ~~~G~iCl~il~-------------~~W~p~~~i 101 (399)
T 4ddg_A 81 NSNGSISLDILR-------------SQWSPALTI 101 (399)
T ss_dssp CTTCBBCCGGGT-------------TSCCTTCCH
T ss_pred CCCCeEeCcccc-------------cCCCccccH
Confidence 999999999997 899999975
No 50
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=7.5e-35 Score=205.40 Aligned_cols=98 Identities=29% Similarity=0.561 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEe---cCCCCcc---eEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 4 SQASLLLQKQLKDLCKNPVDGFSAGL---VDESNVF---EWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~i~~~~---~~~~~~~---~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
+.+.+||++|+++++ .++|+++.. .+++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 578999999999998 678999982 3588999 9999997 888999999999999999999999999999999
Q ss_pred CcccccCCCCcEEeecCCCCCCCCCCCCCCCCCcccccCC
Q 033532 78 MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTV 117 (117)
Q Consensus 78 i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i 117 (117)
+|||||+.+|+||+++|. ++|+|++||
T Consensus 105 i~HPnV~~~G~iCl~iL~-------------~~W~p~~~i 131 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILR-------------EDWSPALDL 131 (190)
T ss_dssp CCCTTBCTTSBBCCGGGT-------------TTCCTTCCH
T ss_pred cccCCCCCCCeEechhcc-------------CCCCCCCCH
Confidence 999999999999999997 899999875
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=8e-34 Score=213.12 Aligned_cols=109 Identities=31% Similarity=0.518 Sum_probs=95.3
Q ss_pred chHHHHHHHHHHHHHHhhCCCCC----eEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 2 AKSQASLLLQKQLKDLCKNPVDG----FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 2 as~~~~~RL~~E~~~l~~~~~~~----i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
++..+.+||++|+++|++++++| +.+.+. ++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~-ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD-EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE-SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeeccc-CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 45689999999999999988775 445564 7899999999999999999999999999999999999999999998
Q ss_pred -----CcccccCCCCcEEeecCCCCCCCCCCCCCCCCCccccc-CC
Q 033532 78 -----MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVH-TV 117 (117)
Q Consensus 78 -----i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~-~i 117 (117)
+|||||+.+|+|||++|.. ..+...++|+|++ ||
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~------~~g~~~e~WsPa~stI 191 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNT------WHGRPEEKWNPQTSSF 191 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTS------SCCCGGGSCCTTTCCH
T ss_pred CCCcccccCCCCcCCeEechhhcc------ccCCCcCCCCcCcCCH
Confidence 9999999999999999962 1233347999998 53
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=1.8e-30 Score=177.91 Aligned_cols=83 Identities=17% Similarity=0.264 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCc----------EEEEEEecCCCCCCCCCEEEEe
Q 033532 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRFT 75 (117)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~~p~~YP~~pP~v~f~ 75 (117)
-.+||++|++++++ ++.+. ++|++.|.+++.||++|+|+|| .|+++|.||++||.+||+|+|.
T Consensus 33 w~~RL~eE~k~L~k------~v~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH------HhccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 38999999999988 24554 6799999999999999999999 9999999999999999999999
Q ss_pred cC-CcccccCCCCcEEeecCC
Q 033532 76 SE-MWHPNVYPDGKVCISILH 95 (117)
Q Consensus 76 t~-i~HPnv~~~G~iCl~~l~ 95 (117)
+. +||||||.+|+|||++|.
T Consensus 106 ~~~~~hpnmY~~G~ICLdIL~ 126 (172)
T 2z6o_A 106 ELDGKTAKMYRGGKICLTDHF 126 (172)
T ss_dssp GGTTTCSSBCTTSBBCCCTTH
T ss_pred CCCCCCCCCCCCCcEechhhc
Confidence 98 999999999999999994
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.84 E-value=1.3e-22 Score=136.45 Aligned_cols=82 Identities=20% Similarity=0.328 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCc----------EEEEEEecCCCCCCCCCEEEEe
Q 033532 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRFT 75 (117)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~~p~~YP~~pP~v~f~ 75 (117)
=.+||+.||+.|.+ +...++++-.+|...+.||++|+|.|+ .|+++++||.+||.+||+|+|.
T Consensus 35 w~~RlkeEy~alI~-------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 35 WTARLKEEYASLIT-------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH-------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 35799999999943 322234566789999999999999999 9999999999999999999999
Q ss_pred cC-CcccccCCCCcEEeecC
Q 033532 76 SE-MWHPNVYPDGKVCISIL 94 (117)
Q Consensus 76 t~-i~HPnv~~~G~iCl~~l 94 (117)
+. .+|||++.+|+|||+++
T Consensus 108 ~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp GGTTTCSSEETTTEECCCTT
T ss_pred cccCcCccccCCCcEEeccc
Confidence 95 89999999999999886
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.68 E-value=5.3e-17 Score=111.44 Aligned_cols=87 Identities=22% Similarity=0.212 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhhCCC---CCeEEEecCCCCcceEEEEEeCCCCCCCCCcE---EEEEEecCCCCCCCCCEEEEec-----
Q 033532 8 LLLQKQLKDLCKNPV---DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGF---FNAIMTFPDNYPVSPPTVRFTS----- 76 (117)
Q Consensus 8 ~RL~~E~~~l~~~~~---~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~---f~~~i~~p~~YP~~pP~v~f~t----- 76 (117)
+|..+|+.++.+.-+ +...+... ++...++.+.+.|.-..+|+|+. |.+.|-||++||++||.|.|..
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~-~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTH-SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEC-TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEc-CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 567788887765322 22333343 56666777777777779999988 8899999999999999998865
Q ss_pred --C---Cc-ccccCCCCcEEeecCC
Q 033532 77 --E---MW-HPNVYPDGKVCISILH 95 (117)
Q Consensus 77 --~---i~-HPnv~~~G~iCl~~l~ 95 (117)
+ |+ ||||+++|+||+++|+
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~ 134 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH 134 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG
T ss_pred cccccccCCCCCCCCCCcEeCcccc
Confidence 1 77 9999999999999993
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.41 E-value=1.7e-13 Score=92.48 Aligned_cols=81 Identities=20% Similarity=0.304 Sum_probs=60.7
Q ss_pred HHHHHHHHhhCCCC-CeEEE--ecCCCCcceEEEEEeCCCCCCCCCcEEEE--EEecCCCCCCCCCEEEEecC------C
Q 033532 10 LQKQLKDLCKNPVD-GFSAG--LVDESNVFEWSVSIIGPPDTLYEGGFFNA--IMTFPDNYPVSPPTVRFTSE------M 78 (117)
Q Consensus 10 L~~E~~~l~~~~~~-~i~~~--~~~~~~~~~w~~~i~gp~~t~y~g~~f~~--~i~~p~~YP~~pP~v~f~t~------i 78 (117)
..+|+..+.+.-+. ..... .-...++..|.++|. .+|+|+.|.+ .|-||++||++||.| |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 34566666554221 11111 111358889999996 6799999995 889999999999999 7766 4
Q ss_pred cccccCCCCcEEeecCC
Q 033532 79 WHPNVYPDGKVCISILH 95 (117)
Q Consensus 79 ~HPnv~~~G~iCl~~l~ 95 (117)
.||||+.+|+||++.|+
T Consensus 100 ~~~~Vd~~G~i~lpyL~ 116 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLH 116 (146)
T ss_dssp CBTTBCTTCBBCCHHHH
T ss_pred CCCCCCCCCCEeccccc
Confidence 89999999999999994
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.08 E-value=0.0046 Score=39.76 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEec
Q 033532 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (117)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t 76 (117)
...+...|+..|+.--+..+.+ . .+....+.+.|..-.+..-+.-.+.+.|.+|++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~-~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--L-SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--C-CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--c-cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3456678888887654444544 2 222356666665222222234478899999999999999998876
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.058 Score=34.91 Aligned_cols=68 Identities=10% Similarity=0.191 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCC-------CCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 7 SLLLQKQLKDLCKNPVDGFSAGLVDE-------SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~i~~~~~~~-------~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
..+...|+..|+.--...+.. .+. .....+.+.|....+ .-..-.+.+.|.+|++||..||.|.+.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTD--LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEEC--CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHChhhhee--cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 445677888887654433332 212 124567777763222 11235788999999999999999998763
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.31 E-value=0.016 Score=37.17 Aligned_cols=69 Identities=13% Similarity=0.198 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecCC--CCcceEEEEEeCCCCCCC--CCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 8 LLLQKQLKDLCKNPVDGFSAGLVDE--SNVFEWSVSIIGPPDTLY--EGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 8 ~RL~~E~~~l~~~~~~~i~~~~~~~--~~~~~w~~~i~gp~~t~y--~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
.+...|+..|+.--...+...-. . .....+.+.+..+.+..- ..-.+.+.|.+|++||..+|.|.+.+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~-~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKG-NGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECC-TTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecC-CCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 45677888887655445544321 1 134455566652222111 124788999999999999999998773
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.50 E-value=0.03 Score=35.90 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhCCCC--CeEEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEec
Q 033532 9 LLQKQLKDLCKNPVD--GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (117)
Q Consensus 9 RL~~E~~~l~~~~~~--~i~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t 76 (117)
+...|+..|+.--.. .+...-....+...+.+.+.. .+..-..-.+.+.|.+|++||..+|.|.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 455677777653221 233211111234577777763 2211112478999999999999999998664
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.89 E-value=0.27 Score=31.51 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCC------CcceEEEEEeCCCC-C-CCCCcEEEEEEecCCCCCCCCCEEEEec
Q 033532 7 SLLLQKQLKDLCKNPVDGFSAGLVDES------NVFEWSVSIIGPPD-T-LYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (117)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~i~~~~~~~~------~~~~w~~~i~gp~~-t-~y~g~~f~~~i~~p~~YP~~pP~v~f~t 76 (117)
..+...|+..|+.--...+.. .+.+ ....+.+.+. +.+ . .-..-.+.+.|.||++||..+|.|.+..
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQD--LRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEE--CCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCccccee--ccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 445677888887654444443 2111 1345666665 221 1 0012468999999999999999998854
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.75 E-value=0.21 Score=33.13 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=22.5
Q ss_pred cEEEEEEecCCCCCCCCCEEEEecC
Q 033532 53 GFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 53 ~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
..+.+.|.+|++||..+|.|...+.
T Consensus 75 ~~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 75 VKIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEEECSSTTSSCCEEEEECS
T ss_pred ceEEEEEEcCCCCCCCCCcEEEEeC
Confidence 3899999999999999999998775
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.80 E-value=0.086 Score=34.80 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=22.1
Q ss_pred cEEEEEEecCCCCCCCCCEEEEecC
Q 033532 53 GFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 53 ~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
-.+.+.|.+|.+||..||.|.+...
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999998874
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=91.35 E-value=0.62 Score=32.12 Aligned_cols=57 Identities=12% Similarity=0.176 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhCCCCCe-EEEecCCCCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 9 LLQKQLKDLCKNPVDGF-SAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 9 RL~~E~~~l~~~~~~~i-~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
+|.+|+.++ |. .+... ..++....+.+.... |....++|.++.+||.++|.+...-+
T Consensus 5 ~li~Ei~~i------GW~~l~~i-d~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP 62 (186)
T 3zqs_A 5 SLIEEIGTL------GWDKLVYA-DTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFP 62 (186)
T ss_dssp SHHHHHHHH------CGGGEEEE-CTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCS
T ss_pred HHHHHHHHh------CCceeeee-cCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCC
Confidence 678888888 42 12223 357888888887333 79999999999999999998875554
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=72.60 E-value=3.6 Score=18.58 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCe
Q 033532 5 QASLLLQKQLKDLCKNPVDGF 25 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~i 25 (117)
....||.-|+...+.+++.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 356799999999999998774
No 65
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=35.60 E-value=16 Score=21.87 Aligned_cols=12 Identities=25% Similarity=0.329 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 033532 6 ASLLLQKQLKDL 17 (117)
Q Consensus 6 ~~~RL~~E~~~l 17 (117)
-+||+++||+-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 468999999887
No 66
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=31.36 E-value=23 Score=18.00 Aligned_cols=14 Identities=7% Similarity=0.154 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHh
Q 033532 5 QASLLLQKQLKDLC 18 (117)
Q Consensus 5 ~~~~RL~~E~~~l~ 18 (117)
..++|+..|++.+.
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 36789999998875
No 67
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=30.92 E-value=44 Score=23.05 Aligned_cols=25 Identities=20% Similarity=0.378 Sum_probs=21.8
Q ss_pred CcEEEEEEecCCCCCC-----CCCEEEEec
Q 033532 52 GGFFNAIMTFPDNYPV-----SPPTVRFTS 76 (117)
Q Consensus 52 g~~f~~~i~~p~~YP~-----~pP~v~f~t 76 (117)
.|.|.|+-.+|--||. .||-|.|.-
T Consensus 110 ~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 110 TGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 5889999999999998 789888765
No 68
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=26.35 E-value=37 Score=21.90 Aligned_cols=29 Identities=28% Similarity=0.368 Sum_probs=22.8
Q ss_pred CCCEEEEec---CCcccccCCCCcEEeecCCC
Q 033532 68 SPPTVRFTS---EMWHPNVYPDGKVCISILHP 96 (117)
Q Consensus 68 ~pP~v~f~t---~i~HPnv~~~G~iCl~~l~~ 96 (117)
.||.|.+-- .--|++|-.+|..|+++|..
T Consensus 43 ~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 43 EPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 578877643 34688999999999999963
No 69
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=24.97 E-value=50 Score=18.00 Aligned_cols=11 Identities=36% Similarity=0.881 Sum_probs=8.4
Q ss_pred EEEecCCCCCC
Q 033532 57 AIMTFPDNYPV 67 (117)
Q Consensus 57 ~~i~~p~~YP~ 67 (117)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 35678999984
No 70
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=23.60 E-value=1.7e+02 Score=19.62 Aligned_cols=43 Identities=16% Similarity=0.367 Sum_probs=30.2
Q ss_pred CCcceEEEEEeCCCCCCCCCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 33 SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 33 ~~~~~w~~~i~gp~~t~y~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
+.-..|.+.+.|+.+.--..-.=++.+.|.+.||. |.-.+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 35679999999887644444566778888888874 55555554
No 71
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.80 E-value=1.2e+02 Score=18.20 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.1
Q ss_pred CCcEEEEEEecCCCCCCCCCEEEEecC
Q 033532 51 EGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (117)
Q Consensus 51 ~g~~f~~~i~~p~~YP~~pP~v~f~t~ 77 (117)
.+..+...|.|+..|.- +|+|.+.-.
T Consensus 27 g~R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 27 NTRELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp SCEEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred cceEEEEEeEeCcccCC-CCEEEEEeE
Confidence 34578888999998884 899976654
No 72
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=21.46 E-value=43 Score=15.34 Aligned_cols=15 Identities=20% Similarity=0.301 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHhh
Q 033532 5 QASLLLQKQLKDLCK 19 (117)
Q Consensus 5 ~~~~RL~~E~~~l~~ 19 (117)
...+++++|+..++.
T Consensus 10 KdKR~lLkeyY~L~~ 24 (26)
T 2c5k_P 10 KDRRLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHhhhc
Confidence 345678899988764
Done!