BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033533
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63966|DNAJ2_MYCTU Chaperone protein DnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2
PE=3 SV=1
Length = 382
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLTSRPCPTCRGVGVVI 198
Query: 99 CSKCK 103
C+
Sbjct: 199 PDPCQ 203
>sp|P63967|DNAJ2_MYCBO Chaperone protein DnaJ 2 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaJ2 PE=3 SV=1
Length = 382
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLTSRPCPTCRGVGVVI 198
Query: 99 CSKCK 103
C+
Sbjct: 199 PDPCQ 203
>sp|Q73XZ6|DNAJ1_MYCPA Chaperone protein DnaJ 1 OS=Mycobacterium paratuberculosis (strain
ATCC BAA-968 / K-10) GN=dnaJ1 PE=3 SV=1
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C+GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCHGKGTNGDSAPVPCDTCGGRGEVQTVQRSLLGQVMTSRPCPTCRGVGVVI 198
Query: 99 CSKC 102
C
Sbjct: 199 PDPC 202
>sp|Q49762|DNAJ2_MYCLE Chaperone protein DnaJ 2 OS=Mycobacterium leprae (strain TN)
GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 135 VDTAVLCDRCQGKGTNGDSAPIPCDTCGGRGEVQTVQRSLLGQMVTARPCPTCRGVGVVI 194
Query: 99 CSKC 102
C
Sbjct: 195 PDPC 198
>sp|B6IVA5|DNAJ_RHOCS Chaperone protein DnaJ OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=dnaJ PE=3 SV=1
Length = 379
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + CESCNG G + C C G V+AQ I R CP C VG V+
Sbjct: 144 VPTSVACESCNGTGAEGGSTPIACPTCNGHG-KVRAQQGFFTIERTCPACHGVGRVIKDP 202
Query: 102 CK 103
C+
Sbjct: 203 CR 204
>sp|Q6A997|DNAJ1_PROAC Chaperone protein DnaJ 1 OS=Propionibacterium acnes (strain
KPA171202 / DSM 16379) GN=dnaJ1 PE=3 SV=1
Length = 392
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN-----RIYRRCPTCRAVGYV 97
EV+ ++C C GKG + CD C G+ + Q + R + CPTC G V
Sbjct: 140 EVDTAVVCPKCQGKGAQSGSEPVTCDTCQGRGEVITVQRSFLGDIRTSQPCPTCHGYGTV 199
Query: 98 LCSKCK 103
+ C+
Sbjct: 200 IPDPCQ 205
>sp|A0LJ41|DNAJ_SYNFM Chaperone protein DnaJ OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=dnaJ PE=3 SV=1
Length = 384
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 56 CESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSKCK 103
CE CNG G VC C G V++Q RI C C+ +G VL S CK
Sbjct: 147 CEECNGSGAEPGTRETVCPVCQGSGQVVQSQGFFRISATCTRCQGMGKVLVSPCK 201
>sp|Q75WD2|DNAJ_ACEP3 Chaperone protein DnaJ OS=Acetobacter pasteurianus (strain NBRC
3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2
Length = 380
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 46 VKQEVEV--GIMCESCNG-------KGWLVCDFCGGQKTNVKAQNN--RIYRRCPTCRAV 94
VK++V V + CE+C+G G VC C G V+AQ + R CPTC
Sbjct: 137 VKKDVRVITRVACEACHGTGSDDGASGVEVCPSCHG-AGKVRAQQGFFVVERPCPTCHGA 195
Query: 95 GYVLCSKCKV 104
G V+ + CKV
Sbjct: 196 GKVVKNPCKV 205
>sp|Q7UM96|DNAJ_RHOBA Chaperone protein DnaJ OS=Rhodopirellula baltica (strain SH1)
GN=dnaJ PE=3 SV=1
Length = 391
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C++C+G G + C CGGQ +++ R+ CPTC+ G + C KC+
Sbjct: 148 VSCDTCDGSGAAAGSEPVTCTMCGGQGQVIQSAGILRVQTTCPTCKGAGKQIGEPCGKCR 207
>sp|B2IBR5|DNAJ_BEII9 Chaperone protein DnaJ OS=Beijerinckia indica subsp. indica (strain
ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaJ PE=3 SV=1
Length = 372
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCK 103
I CE+C+G G +C CGGQ V+AQ I R CP C G ++ C+
Sbjct: 140 ITCEACDGTGAKAGAKPRICPTCGGQG-RVRAQQGFFAIERTCPQCHGRGEIIDDPCQ 196
>sp|B9KPP3|DNAJ_RHOSK Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=dnaJ PE=3 SV=1
Length = 381
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + C++C G G + C C G V+AQ + R CPTC +G ++ +
Sbjct: 147 VPASVACDACKGTGAEGGAEAVTCPTCSGMG-KVRAQQGFFTVERTCPTCNGMGQIVKNP 205
Query: 102 CKV 104
CKV
Sbjct: 206 CKV 208
>sp|Q3IYM8|DNAJ_RHOS4 Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dnaJ PE=3 SV=1
Length = 382
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + C++C G G + C C G V+AQ + R CPTC +G ++ +
Sbjct: 148 VPASVACDACKGTGAEGGAEAVTCPTCSGMG-KVRAQQGFFTVERTCPTCNGMGQIVKNP 206
Query: 102 CKV 104
CKV
Sbjct: 207 CKV 209
>sp|A3PNM0|DNAJ_RHOS1 Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=dnaJ PE=3 SV=1
Length = 382
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + C++C G G + C C G V+AQ + R CPTC +G ++ +
Sbjct: 148 VPASVACDACKGTGAEGGAEAVTCPTCSGMG-KVRAQQGFFTVERTCPTCNGMGQIVKNP 206
Query: 102 CKV 104
CKV
Sbjct: 207 CKV 209
>sp|Q5YZX0|DNAJ1_NOCFA Chaperone protein DnaJ 1 OS=Nocardia farcinica (strain IFM 10152)
GN=dnaJ1 PE=3 SV=1
Length = 384
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 20 IMPSSSSSSRSRPSHSLKSKPALCAPVKQEVEVGIMCESCNGKGW------LVCDFCGGQ 73
+ P + S R+R S ++ A+ V+ ++C++C+G G + C+ CGG
Sbjct: 113 VQPGADSLLRTRLS---LAECAVGVTKHLTVDTAVLCDACHGSGTHGNSKPVRCETCGGA 169
Query: 74 KTNVKAQNNRI-----YRRCPTCRAVGYVL---CSKC 102
Q + + R CPTCR G + C KC
Sbjct: 170 GEVQSVQRSFLGQVLTSRPCPTCRGAGETIPDPCHKC 206
>sp|Q5FSL4|DNAJ_GLUOX Chaperone protein DnaJ OS=Gluconobacter oxydans (strain 621H)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 36.2 bits (82), Expect = 0.070, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 49 EVEVGIMCESCNGKGWL-------VCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLC 99
EV + CE+C+G G C C G V+AQ + R CPTC G +
Sbjct: 142 EVRTRVTCEACHGSGSADPKAGSSTCPTCHG-AGKVRAQQGFFLVERPCPTCHGSGRTVA 200
Query: 100 SKCKV 104
+ CKV
Sbjct: 201 NPCKV 205
>sp|Q2J319|DNAJ_RHOP2 Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain HaA2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CESC+G G C CGG +AQ + R CP+C+ G ++
Sbjct: 141 EIPVSVTCESCSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQIIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|A4WW88|DNAJ_RHOS5 Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=dnaJ PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + C+SC G G + C C G V+AQ + R CPTC +G ++ +
Sbjct: 148 VPASVACDSCKGTGAEGGAEPVTCPTCSGMG-KVRAQQGFFTVERTCPTCNGMGQIVKNP 206
Query: 102 CK 103
CK
Sbjct: 207 CK 208
>sp|B8DQW8|DNAJ_DESVM Chaperone protein DnaJ OS=Desulfovibrio vulgaris (strain Miyazaki F
/ DSM 19637) GN=dnaJ PE=3 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGWL------VCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C+ CNG G C CGG ++Q +I CP CR G V+ C KCK
Sbjct: 146 VTCDECNGSGAAAGTKPETCRHCGGNGQIRQSQGFFQIAVPCPVCRGEGQVIPTPCPKCK 205
>sp|Q21CI1|DNAJ_RHOPB Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain
BisB18) GN=dnaJ PE=3 SV=1
Length = 379
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CESC+G G C CGG +AQ + R CP C+ G +
Sbjct: 141 EIPVSVTCESCSGTGAKAGTKPKTCSMCGGAGRVRQAQGFFTLERTCPGCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|B3CVD9|DNAJ_ORITI Chaperone protein DnaJ OS=Orientia tsutsugamushi (strain Ikeda)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Query: 51 EVGIMCESCNGKGWL------VCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYVL---CS 100
+ + CE+C GKG L C C G Q + C TCR G+V+ C+
Sbjct: 146 KTALTCEACTGKGSLDNNSTSSCPTCRGSGVTRSQQGFFFFENTCQTCRGAGHVIKNPCT 205
Query: 101 KC 102
KC
Sbjct: 206 KC 207
>sp|A6QBG7|DNAJ_SULNB Chaperone protein DnaJ OS=Sulfurovum sp. (strain NBC37-1) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 20/61 (32%)
Query: 56 CESCNGKG-----WLVCDFCGGQKTNVKAQN---------------NRIYRRCPTCRAVG 95
CE C G G CD+CGGQ + Q +I ++CP+C+ G
Sbjct: 151 CEECGGTGAKDGKMETCDYCGGQGQVLMRQGPMQFAQTCPKCHGEGRKIAQKCPSCQGKG 210
Query: 96 Y 96
Y
Sbjct: 211 Y 211
>sp|Q6NG14|DNAJ1_CORDI Chaperone protein DnaJ 1 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ1 PE=3
SV=1
Length = 375
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 14/67 (20%)
Query: 50 VEVGIMCESCNGKGWL------VCDFCGGQKTNVKAQ-----NNRIYRRCPTCRAVGYVL 98
++ I+C+ C G G VC C G + Q N CPTCR G V+
Sbjct: 134 IDTAILCDRCEGTGSKSKSKPNVCSTCNGSGEIQQMQRSFLGNVMTSSPCPTCRGTGEVI 193
Query: 99 ---CSKC 102
C KC
Sbjct: 194 PDPCDKC 200
>sp|A4IX29|DNAJ_FRATW Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 46 VKQEVEVGIM--CESCNGKGW-----LVCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYV 97
V++E+ + M C+SC+G G C C GQ T + Q + + CP C GY
Sbjct: 128 VEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQGTIRRQQGFFAFEQTCPVCNGTGYS 187
Query: 98 LCSKC 102
+ C
Sbjct: 188 ITDPC 192
>sp|P48207|DNAJ_FRATU Chaperone protein DnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 46 VKQEVEVGIM--CESCNGKGW-----LVCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYV 97
V++E+ + M C+SC+G G C C GQ T + Q + + CP C GY
Sbjct: 128 VEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQGTIRRQQGFFAFEQTCPVCNGTGYS 187
Query: 98 LCSKC 102
+ C
Sbjct: 188 ITDPC 192
>sp|Q2A327|DNAJ_FRATH Chaperone protein DnaJ OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=dnaJ PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 46 VKQEVEVGIM--CESCNGKGW-----LVCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYV 97
V++E+ + M C+SC+G G C C GQ T + Q + + CP C GY
Sbjct: 128 VEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQGTIRRQQGFFAFEQTCPVCNGTGYS 187
Query: 98 LCSKC 102
+ C
Sbjct: 188 ITDPC 192
>sp|B3WEQ6|DNAJ_LACCB Chaperone protein DnaJ OS=Lactobacillus casei (strain BL23) GN=dnaJ
PE=3 SV=1
Length = 387
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 22/58 (37%)
Query: 54 IMCESCNGKGWL---------------VCDFCGGQKTNVKAQNNRIYRRCPTCRAVGY 96
+ C C+G G++ VCD CGG +K +CPTC G+
Sbjct: 171 VTCHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK-------EKCPTCHGTGH 221
>sp|Q038N5|DNAJ_LACC3 Chaperone protein DnaJ OS=Lactobacillus casei (strain ATCC 334)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 22/58 (37%)
Query: 54 IMCESCNGKGWL---------------VCDFCGGQKTNVKAQNNRIYRRCPTCRAVGY 96
+ C C+G G++ VCD CGG +K +CPTC G+
Sbjct: 171 VTCHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK-------EKCPTCHGTGH 221
>sp|O08356|DNAJ_RHOS7 Chaperone protein DnaJ OS=Rhodopseudomonas sp. (strain No.7)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|B3Q973|DNAJ_RHOPT Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain TIE-1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|Q6NCY3|DNAJ_RHOPA Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=dnaJ PE=3 SV=1
Length = 379
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|Q5NFG8|DNAJ_FRATT Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=dnaJ PE=3 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 46 VKQEVEVGIM--CESCNGKGW-----LVCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYV 97
V++E+ + M C+SC+G G C C GQ T + Q + + CP C GY
Sbjct: 131 VEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQGTIRRQQGFFAFEQTCPVCNGTGYS 190
Query: 98 LCSKC 102
+ C
Sbjct: 191 ITDPC 195
>sp|Q14GX0|DNAJ_FRAT1 Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=dnaJ PE=3 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 46 VKQEVEVGIM--CESCNGKGW-----LVCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYV 97
V++E+ + M C+SC+G G C C GQ T + Q + + CP C GY
Sbjct: 131 VEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQGTIRRQQGFFAFEQTCPVCNGTGYS 190
Query: 98 LCSKC 102
+ C
Sbjct: 191 ITDPC 195
>sp|Q9RDD7|DNAJ2_STRCO Chaperone protein DnaJ 2 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 49 EVEVGIMCESCNGKGWL------VCDFCGG-----QKTNVKAQNNRIYRRCPTCRAVGYV 97
+V+ ++C +CNG+G CD C G Q T R CP C+ G V
Sbjct: 136 QVDTAVVCNTCNGEGAAPGTSAQTCDMCRGRGEVSQVTRSFLGQVMTSRPCPQCQGFGTV 195
Query: 98 LCSKC 102
+ + C
Sbjct: 196 VPTPC 200
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 54 IMCESCNGKGWLVCDFCGGQKTNVKAQNNRIYRRCPTCRAVGYVLCSKCKVFKC 107
I C CNG+G+LV ++ + + CP+C+ G + +KCK KC
Sbjct: 172 ITCSDCNGEGFLV------EQRRTLLGMFQTKKTCPSCKGEGQTIKNKCK--KC 217
>sp|Q1GKS4|DNAJ_RUEST Chaperone protein DnaJ OS=Ruegeria sp. (strain TM1040) GN=dnaJ PE=3
SV=1
Length = 385
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSK 101
V + C SC G G C C G V+AQ + R CPTC +G ++ +
Sbjct: 150 VPTSVSCTSCEGTGAEGGAEPTTCPTCSGMG-KVRAQQGFFTVERTCPTCSGLGQMIKNP 208
Query: 102 CK 103
CK
Sbjct: 209 CK 210
>sp|A7IC67|DNAJ_XANP2 Chaperone protein DnaJ OS=Xanthobacter autotrophicus (strain ATCC
BAA-1158 / Py2) GN=dnaJ PE=3 SV=1
Length = 379
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVL--- 98
++ + CE+C+G G C CGG AQ + R CP C+ G V+
Sbjct: 140 KIPTSVSCETCSGTGAKPGTQPKACRMCGGAGKIRHAQGFFTLERTCPNCQGRGSVIEDP 199
Query: 99 CSKC 102
CS C
Sbjct: 200 CSDC 203
>sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ OS=Ochrobactrum anthropi (strain ATCC 49188
/ DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1
Length = 377
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---C 99
V I C+ C+G G C C G AQ + R CPTC G ++ C
Sbjct: 142 VPTSITCDECSGSGAKAGSQPTTCTMCSGSGRVRAAQGFFSVERTCPTCNGRGQIIKDPC 201
Query: 100 SKC 102
KC
Sbjct: 202 GKC 204
>sp|P39102|XDJ1_YEAST DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=XDJ1 PE=1 SV=2
Length = 459
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 25/97 (25%)
Query: 34 HSLKSKPALCAPVKQEVEVGIMCESCNGKG----------------WLVCDFCGGQ-KTN 76
H KP V +VE CESC GKG W+VC+ C G+ K
Sbjct: 163 HGSGWKPKRKIHVTHDVE----CESCAGKGSKERLKRFGPGLVASQWVVCEKCNGKGKYT 218
Query: 77 VKAQNNRIYRRCPTCRAVGYVLCSKCKVFKCVTFPNY 113
+ +N + + CP C +G L SK ++ P +
Sbjct: 219 KRPKNPKNF--CPDCAGLG--LLSKKEIITVNVAPGH 251
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
Query: 46 VKQEVEVGIMCESCNGKGW-----------LVCDFCGGQKTNVKAQNNRIYRRCPTCRAV 94
+K +++ ++C C+G GW + C+ C G K R+ R P A
Sbjct: 149 LKFDLKRQVICIKCHGSGWKPKRKIHVTHDVECESCAG-----KGSKERLKRFGPGLVAS 203
Query: 95 GYVLCSKC 102
+V+C KC
Sbjct: 204 QWVVCEKC 211
>sp|A5CD86|DNAJ_ORITB Chaperone protein DnaJ OS=Orientia tsutsugamushi (strain Boryong)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Query: 51 EVGIMCESCNGKGWL------VCDFCGGQKTNVKAQNNRIYRR-CPTCRAVGYVL---CS 100
+ + C++C GKG L C C G Q + C TCR G+V+ C+
Sbjct: 146 KTALTCDACAGKGSLDNNSTSSCPTCRGSGVTRSQQGFFFFENTCQTCRGAGHVIKNPCT 205
Query: 101 KC 102
KC
Sbjct: 206 KC 207
>sp|Q82BY4|DNAJ2_STRAW Chaperone protein DnaJ 2 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 49 EVEVGIMCESCNGKGWL------VCDFCGG-----QKTNVKAQNNRIYRRCPTCRAVGYV 97
+VE ++C +C+G+G CD C G Q T R CP C+ G V
Sbjct: 136 QVETAVVCTTCSGEGAAPGTSAQTCDMCRGRGEVSQVTRSFLGQVMTSRPCPQCQGFGTV 195
Query: 98 LCSKC 102
+ + C
Sbjct: 196 VPTPC 200
>sp|A7I2G3|DNAJ_CAMHC Chaperone protein DnaJ OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaJ PE=3
SV=1
Length = 359
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 56 CESCNGKG-----WLVCDFCGGQKTNVKAQNNRIY-RRCPTCRAVGYVLCSKC 102
C++C+G G C +CGG VK + + CP C+ G ++ KC
Sbjct: 141 CKTCDGTGSKDKKLNTCPYCGGSGKIVKRSGFLSFAQTCPFCKGSGQIVKEKC 193
>sp|Q607A6|DNAJ_METCA Chaperone protein DnaJ OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=dnaJ PE=3 SV=1
Length = 377
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 47 KQEVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVL 98
K +V + C C G G + C C GQ V+ Q + + CPTCR G +
Sbjct: 137 KIKVPTWVTCTECGGSGAKKGSAPVTCPTCHGQGA-VRMQQGFFSVQQTCPTCRGTGQHI 195
Query: 99 CSKCKV 104
C+V
Sbjct: 196 SDPCRV 201
>sp|A1V9Q3|DNAJ_DESVV Chaperone protein DnaJ OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=dnaJ PE=3 SV=1
Length = 376
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGWL------VCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C+ C G G C CGG ++Q +I CP CR G V+ C KCK
Sbjct: 148 VPCDECGGSGAAPGTRPETCRHCGGAGQIRQSQGFFQIAMPCPVCRGEGTVITSPCPKCK 207
>sp|Q725M6|DNAJ_DESVH Chaperone protein DnaJ OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3
SV=1
Length = 376
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGWL------VCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C+ C G G C CGG ++Q +I CP CR G V+ C KCK
Sbjct: 148 VPCDECGGSGAAPGTRPETCRHCGGAGQIRQSQGFFQIAMPCPVCRGEGTVITSPCPKCK 207
>sp|Q5NPS5|DNAJ_ZYMMO Chaperone protein DnaJ OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=dnaJ PE=3 SV=1
Length = 375
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 46 VKQEVEVGIMCESCNGKGW------LVCDFC-GGQKTNVKAQNNRIYRRCPTCRAVGYVL 98
V E++V +C++C+G G CD C G + V+ + + CP C+ G V+
Sbjct: 138 VDIEIDVASVCDACHGSGAKAGSGRKTCDTCHGSGRIRVQQGFFVVEQSCPVCQGKGEVI 197
Query: 99 CSKC 102
C
Sbjct: 198 SDPC 201
>sp|Q7NDG8|DNAJ_GLOVI Chaperone protein DnaJ OS=Gloeobacter violaceus (strain PCC 7421)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVLCSKC 102
I CE+C G G + C CGGQ +A+ CP C+ G V+ S C
Sbjct: 150 ITCETCRGSGSKPGSGPMTCRNCGGQGQIRQARRTPFGLFTQVAACPNCQGTGEVIESPC 209
>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559
OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2
Length = 454
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 56 CESCNGKGWLVCDFCGGQKTNVKAQN---NRIYRRCPTCRAVGYVLCSKC 102
C++C G L C C G K +V + + +C C VG V C C
Sbjct: 405 CQTCGGYRLLPCPSCNGSKKSVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454
>sp|A8LQ63|DNAJ_DINSH Chaperone protein DnaJ OS=Dinoroseobacter shibae (strain DFL 12)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCK 103
+ C +C G G +VC C G V+AQ I + CPTC +G ++ + C+
Sbjct: 153 VSCSACEGTGAEGGAEPVVCPTCSGMG-KVRAQQGFFTIEKTCPTCSGMGQIIKNPCQ 209
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) GN=dnaJ2
PE=3 SV=1
Length = 376
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 49 EVEVGIMCESCNGKGW-----LVCDFCGGQKTNVKAQNN---RIYRRCPTCRAVG--YVL 98
EVE + C +C G G+ C CGG+ V Q N ++ + CPTC G Y
Sbjct: 149 EVEREVPCSACGGTGYDESKSRTCPTCGGRGETV--QGNWFFQVRQTCPTCGGEGVIYEN 206
Query: 99 CSKC 102
C C
Sbjct: 207 CHAC 210
>sp|C4L424|DNAJ_EXISA Chaperone protein DnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283
/ AT1b) GN=dnaJ PE=3 SV=1
Length = 368
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 49 EVEVGIMCESCNGKGWL------VCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYV 97
E+E+ + C++C G G C+ CGG QN + R C C G
Sbjct: 132 ELEIEVECDTCMGSGAKPGTKPETCNRCGGSGVETVEQNTILGRMVNQRPCSQCHGSGKT 191
Query: 98 LCSKC 102
+ KC
Sbjct: 192 IKEKC 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,700,773
Number of Sequences: 539616
Number of extensions: 1664967
Number of successful extensions: 6185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 6012
Number of HSP's gapped (non-prelim): 346
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)