Query 033538
Match_columns 117
No_of_seqs 133 out of 206
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 05:00:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q8ha_ g.32.1.1 (A:) Osteocal 29.8 11 0.00078 20.5 1.3 17 34-50 2-18 (37)
2 d2masa_ c.70.1.1 (A:) Inosine- 20.5 16 0.0012 26.3 1.2 18 33-50 125-142 (313)
3 d1q8fa_ c.70.1.1 (A:) Pyrimidi 19.5 18 0.0013 25.9 1.3 16 33-48 122-137 (308)
4 d1tzyb_ a.22.1.1 (B:) Histone 15.7 20 0.0015 22.7 0.7 11 10-20 57-67 (92)
5 d1j3ua_ a.127.1.1 (A:) L-aspar 10.7 32 0.0023 26.5 0.5 30 5-35 290-323 (462)
6 d1tj7a_ a.127.1.1 (A:) Arginin 10.0 33 0.0024 26.0 0.4 30 5-35 253-284 (455)
7 d2heka1 a.211.1.1 (A:1-369) Hy 9.3 53 0.0039 23.0 1.3 18 3-20 16-33 (369)
8 d1k62b_ a.127.1.1 (B:) Arginin 8.5 34 0.0025 26.1 -0.1 29 5-35 254-285 (459)
9 d1xbra_ b.2.5.4 (A:) T domain 8.1 65 0.0047 22.3 1.3 15 41-55 166-180 (184)
10 d1tjva_ a.127.1.1 (A:) Arginin 8.1 36 0.0026 25.7 -0.1 30 4-35 242-274 (449)
No 1
>d1q8ha_ g.32.1.1 (A:) Osteocalcin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.77 E-value=11 Score=20.50 Aligned_cols=17 Identities=29% Similarity=0.518 Sum_probs=14.8
Q ss_pred CcchhHHHHHhcChHHH
Q 033538 34 NPLKNLNTLLRLNPYAK 50 (117)
Q Consensus 34 NPLKN~~~mlrLNPyAk 50 (117)
+||-..+-.+.|||---
T Consensus 2 dple~krevcelnpdcd 18 (37)
T d1q8ha_ 2 DPLEPRREVCELNPDCD 18 (37)
T ss_dssp CTTHHHHHHHHHSHHHH
T ss_pred CcccchhhhHhcCCCHH
Confidence 79999999999999654
No 2
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]}
Probab=20.48 E-value=16 Score=26.30 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=15.4
Q ss_pred CCcchhHHHHHhcChHHH
Q 033538 33 KNPLKNLNTLLRLNPYAK 50 (117)
Q Consensus 33 KNPLKN~~~mlrLNPyAk 50 (117)
.=||+|++..+++.|-..
T Consensus 125 ~GPLTNlA~al~~~P~~~ 142 (313)
T d2masa_ 125 TGGLTNIAMAARLEPRIV 142 (313)
T ss_dssp CSCSHHHHHHHHHCTHHH
T ss_pred cCCchHHHHHHHhhhhhh
Confidence 479999999999999543
No 3
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]}
Probab=19.53 E-value=18 Score=25.93 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=14.2
Q ss_pred CCcchhHHHHHhcChH
Q 033538 33 KNPLKNLNTLLRLNPY 48 (117)
Q Consensus 33 KNPLKN~~~mlrLNPy 48 (117)
.=||+|++.++++.|-
T Consensus 122 ~GPLTNiA~al~~~P~ 137 (308)
T d1q8fa_ 122 VGPLSNIAVAMRMQPA 137 (308)
T ss_dssp CSCSHHHHHHHHHCGG
T ss_pred cccchHHHHHHHhChH
Confidence 4799999999999993
No 4
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=15.73 E-value=20 Score=22.66 Aligned_cols=11 Identities=55% Similarity=0.773 Sum_probs=9.8
Q ss_pred hCcHHHHhhhc
Q 033538 10 INSDEVQSVVR 20 (117)
Q Consensus 10 InSdEIQsvlr 20 (117)
|.|.|||.+||
T Consensus 57 itsreIqtAvr 67 (92)
T d1tzyb_ 57 ITSREIQTAVR 67 (92)
T ss_dssp ECHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 78999999987
No 5
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]}
Probab=10.68 E-value=32 Score=26.48 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=17.7
Q ss_pred hhhhhhCcHHHHhhh--cCCcccccC--CCCCCCc
Q 033538 5 DLARIINSDEVQSVV--RPIKTEVKR--APMKKNP 35 (117)
Q Consensus 5 Dl~RiInSdEIQsvl--r~~k~~~kr--~~~KKNP 35 (117)
|| |++.|.|+--+- ..+...+-- =++|+||
T Consensus 290 Di-~ll~s~e~~~i~E~~~~~~~~GSSiMP~KrNP 323 (462)
T d1j3ua_ 290 DL-RLMASGPRAGLSEIVLPARQPGSSIMPGKVNP 323 (462)
T ss_dssp HH-HHHTCCSTTSCCCEECCCCSCCCSSCTTCCCC
T ss_pred HH-HHHhCCcccceeeecccccccchhhhccccCC
Confidence 44 677788776554 333333322 3889999
No 6
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]}
Probab=10.00 E-value=33 Score=26.00 Aligned_cols=30 Identities=33% Similarity=0.374 Sum_probs=17.7
Q ss_pred hhhhhhCcHHHHhhhcCCcccccC--CCCCCCc
Q 033538 5 DLARIINSDEVQSVVRPIKTEVKR--APMKKNP 35 (117)
Q Consensus 5 Dl~RiInSdEIQsvlr~~k~~~kr--~~~KKNP 35 (117)
|| ++++|.|+--+--++.....- =++|+||
T Consensus 253 Dl-~l~~s~e~~~~~~~~~~~~GSSiMP~KrNP 284 (455)
T d1tj7a_ 253 DL-IFFNTGEAGFVELSDRVTSGSSLMPQKKNP 284 (455)
T ss_dssp HH-HHHTSTTTCCEECCGGGCBCCTTCTTCCBC
T ss_pred HH-HHhhhhhhheeeccccccccccccccccCc
Confidence 44 677888875443343333222 2889999
No 7
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=9.27 E-value=53 Score=22.98 Aligned_cols=18 Identities=22% Similarity=0.113 Sum_probs=14.4
Q ss_pred chhhhhhhCcHHHHhhhc
Q 033538 3 NADLARIINSDEVQSVVR 20 (117)
Q Consensus 3 NaDl~RiInSdEIQsvlr 20 (117)
..|..|||+|++.|+.=+
T Consensus 16 ~~~~~rii~s~~fqRL~~ 33 (369)
T d2heka1 16 GEAGLRLIDSFPFQRLRY 33 (369)
T ss_dssp EHHHHHHHTSHHHHGGGG
T ss_pred CHHHHHHhCCHhHhcccC
Confidence 367889999999998544
No 8
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.47 E-value=34 Score=26.06 Aligned_cols=29 Identities=34% Similarity=0.398 Sum_probs=18.1
Q ss_pred hhhhhhCcHHHHhhhcCCcccc-cC--CCCCCCc
Q 033538 5 DLARIINSDEVQSVVRPIKTEV-KR--APMKKNP 35 (117)
Q Consensus 5 Dl~RiInSdEIQsvlr~~k~~~-kr--~~~KKNP 35 (117)
|| +++.|.|+ ..+..+-... -- =++|+||
T Consensus 254 Dl-~l~~~~e~-~~~~~~~~~~~GSSiMPqKrNP 285 (459)
T d1k62b_ 254 DL-ILYCTKEF-SFVQLSDAYSTGSSLMPRKKNP 285 (459)
T ss_dssp HH-HHHTSTTT-CSEECCGGGCEECSSCTTCEEC
T ss_pred HH-HHhccccc-cceeeccccccccccccccccc
Confidence 55 57888888 5555543222 22 3889999
No 9
>d1xbra_ b.2.5.4 (A:) T domain from Brachyury transcription factor {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=8.15 E-value=65 Score=22.29 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=11.3
Q ss_pred HHHhcChHHHHHHHH
Q 033538 41 TLLRLNPYAKTARRM 55 (117)
Q Consensus 41 ~mlrLNPyAk~~rr~ 55 (117)
.=...||||+.+|..
T Consensus 166 lKi~~NpFAkgfR~~ 180 (184)
T d1xbra_ 166 LKIKHNPFAKAFLDA 180 (184)
T ss_dssp HHHHHCGGGHHHHHH
T ss_pred HHhccCccccccccc
Confidence 345679999998854
No 10
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]}
Probab=8.09 E-value=36 Score=25.65 Aligned_cols=30 Identities=30% Similarity=0.422 Sum_probs=18.4
Q ss_pred hhhhhhhCcHHHHhhhcCCcc-cccC--CCCCCCc
Q 033538 4 ADLARIINSDEVQSVVRPIKT-EVKR--APMKKNP 35 (117)
Q Consensus 4 aDl~RiInSdEIQsvlr~~k~-~~kr--~~~KKNP 35 (117)
.|| ++.+|.|+ .++..+-. ...- =++|+||
T Consensus 242 ~Dl-~l~~~~e~-~~~e~~~~~~~GSSiMP~KrNP 274 (449)
T d1tjva_ 242 EDL-IIYSTSEF-GFLTLSDAFSTGSSLMPQKKNP 274 (449)
T ss_dssp HHH-HHHTSTTT-CSEECCGGGSEECTTSTTCEEC
T ss_pred HHH-HHHhcCch-hhhcccccccccccccccccch
Confidence 355 57888888 55554422 2222 2889999
Done!