Query 033540
Match_columns 117
No_of_seqs 33 out of 35
Neff 2.4
Searched_HMMs 13730
Date Mon Mar 25 05:02:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033540.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033540hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g1pa_ g.3.6.1 (A:) Conotoxin 63.2 0.75 5.5E-05 25.6 0.1 9 98-106 5-13 (32)
2 d1i58a_ d.122.1.3 (A:) Histidi 28.4 15 0.0011 22.1 2.1 22 43-64 3-26 (189)
3 d1en2a2 g.3.1.1 (A:46-86) Isol 25.4 7.8 0.00057 21.9 0.2 26 81-115 12-37 (41)
4 d1wpda_ g.3.7.2 (A:) Maurotoxi 17.5 24 0.0017 19.5 1.2 17 97-115 18-34 (34)
5 d1fjna_ g.3.7.3 (A:) Defensin 15.5 29 0.0021 19.7 1.2 22 95-116 17-39 (39)
6 d2bbkl_ g.21.1.1 (L:) Methylam 14.7 28 0.002 23.9 1.2 14 71-84 29-42 (125)
7 d1wt7a_ g.3.7.2 (A:) Maurotoxi 14.5 9.1 0.00066 22.1 -1.2 33 81-115 4-41 (41)
8 d1uhaa1 g.3.1.1 (A:1-42) Lecti 14.3 22 0.0016 20.0 0.5 23 80-111 11-33 (42)
9 d1oedb_ f.36.1.1 (B:) Acetylch 12.0 31 0.0023 22.9 0.8 20 4-23 68-87 (250)
10 d1uhaa2 g.3.1.1 (A:43-82) Lect 11.6 34 0.0024 19.0 0.7 25 81-115 11-35 (40)
No 1
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=63.24 E-value=0.75 Score=25.65 Aligned_cols=9 Identities=67% Similarity=1.674 Sum_probs=7.7
Q ss_pred CCeeeeeee
Q 033540 98 KPFGFCSFT 106 (117)
Q Consensus 98 kPFG~CsFt 106 (117)
|||||||+-
T Consensus 5 kpygfcslp 13 (32)
T d1g1pa_ 5 KPYGFCSLP 13 (32)
T ss_dssp CTTSBCCCS
T ss_pred ccccceech
Confidence 799999973
No 2
>d1i58a_ d.122.1.3 (A:) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]}
Probab=28.38 E-value=15 Score=22.09 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=15.7
Q ss_pred cceechhH--HHHHHhHHHHhccC
Q 033540 43 EMVPLMEI--KTVMMMNETRRKLN 64 (117)
Q Consensus 43 ~mvPv~~~--~~~~~~ne~rr~lg 64 (117)
.|+|+.+. ++..++++..+.++
T Consensus 3 ~~~pi~~~~~r~~rlirdl~~~l~ 26 (189)
T d1i58a_ 3 HMVPISFVFNRFPRMVRDLAKKMN 26 (189)
T ss_dssp SEEETHHHHTTHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHHHHHHHHHHHcC
Confidence 59999886 46666777766665
No 3
>d1en2a2 g.3.1.1 (A:46-86) Isolectin VI {Stinging nettle (Urtica dioica), UDA [TaxId: 3501]}
Probab=25.44 E-value=7.8 Score=21.87 Aligned_cols=26 Identities=27% Similarity=0.766 Sum_probs=21.1
Q ss_pred eeecCCceeeeecCCCCCCeeeeeeeccccccCcc
Q 033540 81 LCLPSPCCYAINCNIPNKPFGFCSFTPQTCNCLRC 115 (117)
Q Consensus 81 ~C~~t~CCY~InCniP~kPFG~CsFtP~tC~C~gC 115 (117)
.|.+-.||. ++|+|--|+.-|.+.+|
T Consensus 12 ~C~~g~CCS---------~~G~CG~t~~~C~~~gC 37 (41)
T d1en2a2 12 PCGQDRCCS---------VHGWCGGGNDYCSGSKC 37 (41)
T ss_dssp CCCTTCEEE---------TTSBEESSHHHHSGGGE
T ss_pred CCCCCCccC---------CCCcccCCccccCCCcc
Confidence 466666776 79999999999988877
No 4
>d1wpda_ g.3.7.2 (A:) Maurotoxin {Scorpion (Scorpio maurus) [TaxId: 53956]}
Probab=17.50 E-value=24 Score=19.54 Aligned_cols=17 Identities=41% Similarity=1.218 Sum_probs=12.5
Q ss_pred CCCeeeeeeeccccccCcc
Q 033540 97 NKPFGFCSFTPQTCNCLRC 115 (117)
Q Consensus 97 ~kPFG~CsFtP~tC~C~gC 115 (117)
|-|.|.| .-++|.|.+|
T Consensus 18 gcp~~kc--~nr~ckc~~c 34 (34)
T d1wpda_ 18 GCPYGKC--MNRKCKCNRC 34 (34)
T ss_dssp CSSCBCC--BTTBCCBCCC
T ss_pred CCCcchh--ccccccccCC
Confidence 3477777 5688888887
No 5
>d1fjna_ g.3.7.3 (A:) Defensin MGD-1 {Mediterranean mussel (Mytilus galloprovincialis) [TaxId: 29158]}
Probab=15.53 E-value=29 Score=19.68 Aligned_cols=22 Identities=36% Similarity=1.043 Sum_probs=18.4
Q ss_pred CCCCCeeeee-eeccccccCccc
Q 033540 95 IPNKPFGFCS-FTPQTCNCLRCH 116 (117)
Q Consensus 95 iP~kPFG~Cs-FtP~tC~C~gC~ 116 (117)
|||+-=|+|+ +.--+|.|..|+
T Consensus 17 i~G~~GGYC~g~~kltCtCYrcg 39 (39)
T d1fjna_ 17 IPGRCGGYCGGWHRLRCTCYRCG 39 (39)
T ss_dssp STTCCEEEECSSTTCSEEEECCC
T ss_pred CCCccccccCcceeeEEEEEecC
Confidence 7888899996 667789999885
No 6
>d2bbkl_ g.21.1.1 (L:) Methylamine dehydrogenase {Paracoccus denitrificans [TaxId: 266]}
Probab=14.67 E-value=28 Score=23.90 Aligned_cols=14 Identities=43% Similarity=1.215 Sum_probs=11.1
Q ss_pred cccccCCCCCeeec
Q 033540 71 VCTCCGGAKGLCLP 84 (117)
Q Consensus 71 ~CtCC~~a~~~C~~ 84 (117)
.|.||||+-.+|-|
T Consensus 29 lCsCcGGs~tsCPP 42 (125)
T d2bbkl_ 29 ICDCSGGSLTNCPP 42 (125)
T ss_dssp BGGGGTCCSSSBCT
T ss_pred EEcccCCCcccCCC
Confidence 58999998777754
No 7
>d1wt7a_ g.3.7.2 (A:) Maurotoxin {Scorpion (Scorpio maurus) [TaxId: 53956]}
Probab=14.48 E-value=9.1 Score=22.13 Aligned_cols=33 Identities=30% Similarity=0.842 Sum_probs=21.3
Q ss_pred eeecCCceeeeecCCC-----CCCeeeeeeeccccccCcc
Q 033540 81 LCLPSPCCYAINCNIP-----NKPFGFCSFTPQTCNCLRC 115 (117)
Q Consensus 81 ~C~~t~CCY~InCniP-----~kPFG~CsFtP~tC~C~gC 115 (117)
.|++-.|=-+-+|-.| |.|.+.| .-++|.|.||
T Consensus 4 tcldi~C~gskdCY~PC~k~tGc~n~KC--mNk~CKCYgc 41 (41)
T d1wt7a_ 4 TCLDLACTGSKDCYAPCRKQTGCPNAKC--INKSCKCYGC 41 (41)
T ss_dssp SCSCCTTSCHHHHHHHHHHHHSCCCEEE--ETTEEEECCC
T ss_pred ceeeeeeccchhhhhHHHHHhCCCchhh--hcccCeecCC
Confidence 4555555444445444 6678887 5788888887
No 8
>d1uhaa1 g.3.1.1 (A:1-42) Lectin-D {American pokeweed (Phytolacca americana) [TaxId: 3527]}
Probab=14.30 E-value=22 Score=19.98 Aligned_cols=23 Identities=30% Similarity=0.915 Sum_probs=16.9
Q ss_pred CeeecCCceeeeecCCCCCCeeeeeeeccccc
Q 033540 80 GLCLPSPCCYAINCNIPNKPFGFCSFTPQTCN 111 (117)
Q Consensus 80 ~~C~~t~CCY~InCniP~kPFG~CsFtP~tC~ 111 (117)
..|....||. ++|+|-.++.-|+
T Consensus 11 ~~C~~g~CCS---------~~G~CG~t~~yCg 33 (42)
T d1uhaa1 11 KRCPNGKCCS---------QWGYCGTTDNYCG 33 (42)
T ss_dssp BCCGGGCEEC---------TTSCEESSHHHHS
T ss_pred CcCCCCCccC---------CCCcccCchhhhc
Confidence 3566666665 7899988888775
No 9
>d1oedb_ f.36.1.1 (B:) Acetylcholine receptor protein, beta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=12.02 E-value=31 Score=22.85 Aligned_cols=20 Identities=15% Similarity=0.178 Sum_probs=15.5
Q ss_pred chhHHHHHHHHHHHhhccCC
Q 033540 4 YGVSFSLLFLLILANVISPN 23 (117)
Q Consensus 4 ~~~~~~~~fl~~~a~v~~~~ 23 (117)
|.+.+.+++++++.++++.|
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~ 87 (250)
T d1oedb_ 68 LMFIMILVAFSVILSVVVLN 87 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhee
Confidence 55666788888888888774
No 10
>d1uhaa2 g.3.1.1 (A:43-82) Lectin-D {American pokeweed (Phytolacca americana) [TaxId: 3527]}
Probab=11.59 E-value=34 Score=19.02 Aligned_cols=25 Identities=32% Similarity=1.111 Sum_probs=17.7
Q ss_pred eeecCCceeeeecCCCCCCeeeeeeeccccccCcc
Q 033540 81 LCLPSPCCYAINCNIPNKPFGFCSFTPQTCNCLRC 115 (117)
Q Consensus 81 ~C~~t~CCY~InCniP~kPFG~CsFtP~tC~C~gC 115 (117)
.|..-.||. .+|+|-.++.-|+ .+|
T Consensus 11 ~C~~g~CCS---------~~G~CG~t~~~Cg-~gC 35 (40)
T d1uhaa2 11 LCEEDMCCS---------KYGWCGYSDDHCE-DGC 35 (40)
T ss_dssp CCSTTCEEC---------TTSBEECSHHHHS-TTC
T ss_pred cCCCCCccC---------CCccccCcccccc-Ccc
Confidence 566666765 6888888888776 444
Done!