Your job contains 1 sequence.
>033541
MTPLIWICVQVKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTK
VRVARGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPVDLVMKKTYDAKSGKGMPDL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033541
(117 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504954880 - symbol:AT5G23535 species:3702 "Ara... 418 3.7e-39 1
DICTYBASE|DDB_G0269640 - symbol:DDB_G0269640 "39S ribosom... 145 3.2e-10 1
UNIPROTKB|Q3SYS0 - symbol:MRPL24 "39S ribosomal protein L... 136 2.9e-09 1
UNIPROTKB|F1RHJ1 - symbol:MRPL24 "Uncharacterized protein... 133 6.2e-09 1
UNIPROTKB|Q96A35 - symbol:MRPL24 "39S ribosomal protein L... 130 1.4e-08 1
MGI|MGI:1914957 - symbol:Mrpl24 "mitochondrial ribosomal ... 130 1.4e-08 1
RGD|1359289 - symbol:mrpl24 "mitochondrial ribosomal prot... 130 1.4e-08 1
TIGR_CMR|BA_0121 - symbol:BA_0121 "ribosomal protein L24"... 129 1.6e-08 1
TIGR_CMR|CHY_2298 - symbol:CHY_2298 "ribosomal protein L2... 124 5.3e-08 1
UNIPROTKB|E2QS97 - symbol:MRPL24 "Uncharacterized protein... 122 1.4e-07 1
ZFIN|ZDB-GENE-040718-98 - symbol:mrpl24 "mitochondrial ri... 121 1.7e-07 1
UNIPROTKB|H9KZY7 - symbol:MRPL24 "Uncharacterized protein... 108 2.6e-06 1
GENEDB_PFALCIPARUM|PFF0245w - symbol:PFF0245w "50S riboso... 106 6.5e-06 1
UNIPROTKB|C6KSP8 - symbol:PFF0245w "Mitochondrial ribosom... 106 6.5e-06 1
TIGR_CMR|SO_0242 - symbol:SO_0242 "ribosomal protein L24"... 100 1.9e-05 1
GENEDB_PFALCIPARUM|PFL1150c - symbol:PFL1150c "ribosomal ... 102 3.0e-05 1
UNIPROTKB|Q8I5H8 - symbol:PFL1150c "Mitochondrial ribosom... 102 3.0e-05 1
TIGR_CMR|CBU_0249 - symbol:CBU_0249 "ribosomal protein L2... 93 0.00010 1
UNIPROTKB|Q29MA5 - symbol:mRpL24 "Probable 39S ribosomal ... 96 0.00017 1
UNIPROTKB|P60627 - symbol:rplX "50S ribosomal protein L24... 89 0.00027 1
FB|FBgn0031651 - symbol:mRpL24 "mitochondrial ribosomal p... 91 0.00062 1
>TAIR|locus:504954880 [details] [associations]
symbol:AT5G23535 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB025633 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B OMA:VIQAYPA EMBL:BT011601
EMBL:BT012239 EMBL:AK227904 IPI:IPI00524746 RefSeq:NP_680212.1
UniGene:At.44055 ProteinModelPortal:Q9LT09 SMR:Q9LT09 STRING:Q9LT09
PaxDb:Q9LT09 PRIDE:Q9LT09 EnsemblPlants:AT5G23535.1 GeneID:832419
KEGG:ath:AT5G23535 TAIR:At5g23535 InParanoid:Q9LT09
PhylomeDB:Q9LT09 ProtClustDB:CLSN2690194 Genevestigator:Q9LT09
Uniprot:Q9LT09
Length = 159
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 77/92 (83%), Positives = 85/92 (92%)
Query: 26 FTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRTT 85
FTVEAP+HASNVQV+DPVTG+PCKVG KYLEDGTKVRVARG G SGSIIPRPEILKIR T
Sbjct: 68 FTVEAPLHASNVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRPEILKIRAT 127
Query: 86 PRPTVAGPKDTPVDLVMKKTYDAKSGKGMPDL 117
PRPT AGPKDTP++ V ++TYDAK+GKGMPDL
Sbjct: 128 PRPTTAGPKDTPMEFVWEQTYDAKTGKGMPDL 159
>DICTYBASE|DDB_G0269640 [details] [associations]
symbol:DDB_G0269640 "39S ribosomal protein L24,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 dictyBase:DDB_G0269640
Pfam:PF00467 EMBL:AAFI02000005 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HAMAP:MF_01326_B RefSeq:XP_646137.1 ProteinModelPortal:Q55DJ4
STRING:Q55DJ4 EnsemblProtists:DDB0190423 GeneID:8617087
KEGG:ddi:DDB_G0269640 InParanoid:Q55DJ4 OMA:SHIDPKY
ProtClustDB:CLSZ2431389 Uniprot:Q55DJ4
Length = 164
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 26 FTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEI-LKIRT 84
+T EAPIH SN+ +DP PCKV + L DG + RV++ S SII +P++ +
Sbjct: 74 YTKEAPIHYSNISHIDPKYNVPCKVRFQ-LVDGARERVSK---ISNSIIAKPDLSANFKK 129
Query: 85 TPRPTVAGPKDTPVDLVMKKTYD 107
R V GP DT ++V K+T+D
Sbjct: 130 WRRDNVEGPYDTTPEIVKKRTFD 152
>UNIPROTKB|Q3SYS0 [details] [associations]
symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 PDB:2FTC
PDBsum:2FTC EMBL:BC103424 IPI:IPI00691136 RefSeq:NP_001029748.1
UniGene:Bt.47838 ProteinModelPortal:Q3SYS0 STRING:Q3SYS0
Ensembl:ENSBTAT00000001991 GeneID:532203 KEGG:bta:532203 CTD:79590
GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
HOVERGEN:HBG093899 InParanoid:Q3SYS0 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
EvolutionaryTrace:Q3SYS0 NextBio:20875629 Uniprot:Q3SYS0
Length = 216
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPR 87
EAP+ + V+++DP+ KP +V ++ E G +VRV+ SG IIP+P++ + P
Sbjct: 112 EAPLLHNQVKLVDPMDRKPTEVEWRFTEAGERVRVST---RSGRIIPKPDVPRADGIVPE 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
+ GPKDT V+ ++KTY
Sbjct: 169 TWIDGPKDTSVEDALEKTY 187
>UNIPROTKB|F1RHJ1 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B CTD:79590
GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:CU582900
RefSeq:NP_001231376.1 RefSeq:NP_001231377.1 UniGene:Ssc.2929
Ensembl:ENSSSCT00000007086 GeneID:100156363 KEGG:ssc:100156363
Uniprot:F1RHJ1
Length = 216
Score = 133 (51.9 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPR 87
EAP+ + V+++DP KP V ++ E G +VRV+ SG IIP+PE + P
Sbjct: 112 EAPLLHNQVKLVDPTDRKPTDVEWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPE 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
+ GPKDT V+ ++KTY
Sbjct: 169 TWIDGPKDTSVEDALEKTY 187
>UNIPROTKB|Q96A35 [details] [associations]
symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CH471121 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
EMBL:AL590666 eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
CTD:79590 HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
HSSP:Q9RXJ1 EMBL:AK024570 EMBL:CR457329 EMBL:AK222500 EMBL:AK223066
EMBL:BC012440 EMBL:BC016700 EMBL:AB051341 IPI:IPI00514506
RefSeq:NP_078816.2 RefSeq:NP_663781.1 UniGene:Hs.418233
ProteinModelPortal:Q96A35 SMR:Q96A35 IntAct:Q96A35 STRING:Q96A35
PhosphoSite:Q96A35 DMDM:74751733 PaxDb:Q96A35 PRIDE:Q96A35
Ensembl:ENST00000361531 Ensembl:ENST00000368211
Ensembl:ENST00000412846 Ensembl:ENST00000420938
Ensembl:ENST00000434558 GeneID:79590 KEGG:hsa:79590 UCSC:uc001fpw.1
GeneCards:GC01M156707 HGNC:HGNC:14037 HPA:HPA030295 MIM:611836
neXtProt:NX_Q96A35 PharmGKB:PA30954 InParanoid:Q96A35
PhylomeDB:Q96A35 GenomeRNAi:79590 NextBio:68600 Bgee:Q96A35
CleanEx:HS_MRPL24 Genevestigator:Q96A35 Uniprot:Q96A35
Length = 216
Score = 130 (50.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPR 87
EAP+ V+++DP+ KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 112 EAPLLHRQVKLVDPMDRKPTEIEWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPE 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
+ GPKDT V+ +++TY
Sbjct: 169 TWIDGPKDTSVEDALERTY 187
>MGI|MGI:1914957 [details] [associations]
symbol:Mrpl24 "mitochondrial ribosomal protein L24"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 MGI:MGI:1914957 Pfam:PF00467
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
HOGENOM:HOG000031326 HOVERGEN:HBG093899 OMA:NTHYRYV
OrthoDB:EOG4KD6MZ eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:AK003362
EMBL:AK008117 EMBL:AK008961 EMBL:AK013394 EMBL:AK019976
EMBL:AK020157 EMBL:AK167623 EMBL:BC004736 EMBL:BC025506
EMBL:BC031730 IPI:IPI00162769 RefSeq:NP_080867.2 UniGene:Mm.393802
ProteinModelPortal:Q9CQ06 SMR:Q9CQ06 STRING:Q9CQ06
PhosphoSite:Q9CQ06 PaxDb:Q9CQ06 PRIDE:Q9CQ06
Ensembl:ENSMUST00000019854 Ensembl:ENSMUST00000119968
Ensembl:ENSMUST00000121048 Ensembl:ENSMUST00000121920 GeneID:67707
KEGG:mmu:67707 UCSC:uc008ptd.1 InParanoid:Q9CQ06 NextBio:325321
Bgee:Q9CQ06 CleanEx:MM_MRPL24 Genevestigator:Q9CQ06 Uniprot:Q9CQ06
Length = 216
Score = 130 (50.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPR 87
EAP+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 112 EAPLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPE 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
GPKDT V+ +++TY
Sbjct: 169 TWTDGPKDTSVEDALERTY 187
>RGD|1359289 [details] [associations]
symbol:mrpl24 "mitochondrial ribosomal protein L24"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR003256 InterPro:IPR005825
PROSITE:PS01108 RGD:1359289 Pfam:PF00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
HOGENOM:HOG000031326 HOVERGEN:HBG093899 OrthoDB:EOG4KD6MZ
eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:BC082018 IPI:IPI00372397
RefSeq:NP_001007638.1 UniGene:Rn.162593 ProteinModelPortal:Q66H47
STRING:Q66H47 PhosphoSite:Q66H47 Ensembl:ENSRNOT00000035271
GeneID:295224 KEGG:rno:295224 UCSC:RGD:1359289 InParanoid:Q66H47
NextBio:639133 Genevestigator:Q66H47 Uniprot:Q66H47
Length = 216
Score = 130 (50.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPR 87
EAP+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 112 EAPLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPE 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
GPKDT V+ +++TY
Sbjct: 169 TWTDGPKDTSVEDALERTY 187
>TIGR_CMR|BA_0121 [details] [associations]
symbol:BA_0121 "ribosomal protein L24" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:NP_842689.1
RefSeq:YP_016726.1 RefSeq:YP_026407.1 ProteinModelPortal:Q81VR9
DNASU:1086419 EnsemblBacteria:EBBACT00000008351
EnsemblBacteria:EBBACT00000018007 EnsemblBacteria:EBBACT00000023262
GeneID:1086419 GeneID:2819215 GeneID:2851558 KEGG:ban:BA_0121
KEGG:bar:GBAA_0121 KEGG:bat:BAS0121 OMA:QEAPIQA
BioCyc:BANT260799:GJAJ-132-MONOMER
BioCyc:BANT261594:GJ7F-134-MONOMER Uniprot:Q81VR9
Length = 103
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 27 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 58 TKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>TIGR_CMR|CHY_2298 [details] [associations]
symbol:CHY_2298 "ribosomal protein L24" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
RefSeq:YP_361107.1 ProteinModelPortal:Q3A9S7 SMR:Q3A9S7
STRING:Q3A9S7 GeneID:3726665 KEGG:chy:CHY_2298 PATRIC:21277667
OMA:VIQAYPA BioCyc:CHYD246194:GJCN-2297-MONOMER Uniprot:Q3A9S7
Length = 107
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
EAPIH SNV V+ P GKP +VG K+L DG K+RV + G S
Sbjct: 63 EAPIHVSNVMVICPSCGKPTRVGKKFLADGKKIRVCKKCGES 104
>UNIPROTKB|E2QS97 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:AAEX03005314
Ensembl:ENSCAFT00000026511 Uniprot:E2QS97
Length = 219
Score = 122 (48.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILK----IRT 84
EAP+ V+++DPV KP +V ++ E G +VRV+ SG IIP+P+ + +
Sbjct: 112 EAPLLHHQVKLVDPVDRKPTEVEWRFTEAGERVRVS---SRSGRIIPKPDFPRADGIVPE 168
Query: 85 TPRPTVAGPKDTPVDLVMKKTY 106
T + GPKDT V+ +++TY
Sbjct: 169 TWTGSTDGPKDTSVEDALERTY 190
>ZFIN|ZDB-GENE-040718-98 [details] [associations]
symbol:mrpl24 "mitochondrial ribosomal protein L24"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
ZFIN:ZDB-GENE-040718-98 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BX927401 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ EMBL:BC076182
IPI:IPI00492356 RefSeq:NP_001002401.1 UniGene:Dr.9429 HSSP:Q9RXJ1
ProteinModelPortal:Q6DH02 STRING:Q6DH02 PRIDE:Q6DH02
Ensembl:ENSDART00000010862 GeneID:436674 KEGG:dre:436674
InParanoid:A3KQS2 NextBio:20831117 Bgee:Q6DH02 Uniprot:Q6DH02
Length = 216
Score = 121 (47.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEIL-KIRTTPR 87
EAP+ ++ ++DP KP ++ +Y E+G +VRV+ +G IIP+P K P+
Sbjct: 112 EAPLLLKDIALIDPTDRKPTEIQWRYTEEGERVRVSV---RTGRIIPKPVFQRKDGIVPQ 168
Query: 88 PTVAGPKDTPVDLVMKKTY 106
GPKDT + ++KTY
Sbjct: 169 QWKDGPKDTSPEDTLQKTY 187
>UNIPROTKB|H9KZY7 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR003256 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12903 GeneTree:ENSGT00390000014542
EMBL:AADN02034595 Ensembl:ENSGALT00000021620 OMA:YIAREAP
Uniprot:H9KZY7
Length = 95
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 39 VLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRT--TPRPTVAGPKDT 96
++DP KP +V +Y E+G +VRV+ +G IIP P + + R P + GPKDT
Sbjct: 1 LVDPEDRKPTEVDWRYTEEGERVRVSL---RTGRIIPLP-LWQRRDGIVPEQWIDGPKDT 56
Query: 97 PVDLVMKKTY 106
VD + KTY
Sbjct: 57 SVDDALDKTY 66
>GENEDB_PFALCIPARUM|PFF0245w [details] [associations]
symbol:PFF0245w "50S ribosomal subunit L24,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
Uniprot:C6KSP8
Length = 194
Score = 106 (42.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 28 VEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRTTPR 87
+E IH SNVQ++D KV +Y +D +R+++ SG++IP P K +
Sbjct: 95 IEKKIHYSNVQLIDNFLKTNTKVALRYTDDNQVIRISK---KSGTVIPWPSE-KTKEEDY 150
Query: 88 PTVA-GPKDTPVDLVMKKTYDAKS 110
+ P DT +KKTYD K+
Sbjct: 151 DQIEENPLDTLPQEALKKTYDYKT 174
>UNIPROTKB|C6KSP8 [details] [associations]
symbol:PFF0245w "Mitochondrial ribosomal protein L24,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
Uniprot:C6KSP8
Length = 194
Score = 106 (42.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 28 VEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRTTPR 87
+E IH SNVQ++D KV +Y +D +R+++ SG++IP P K +
Sbjct: 95 IEKKIHYSNVQLIDNFLKTNTKVALRYTDDNQVIRISK---KSGTVIPWPSE-KTKEEDY 150
Query: 88 PTVA-GPKDTPVDLVMKKTYDAKS 110
+ P DT +KKTYD K+
Sbjct: 151 DQIEENPLDTLPQEALKKTYDYKT 174
>TIGR_CMR|SO_0242 [details] [associations]
symbol:SO_0242 "ribosomal protein L24" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:QEAPIQA RefSeq:NP_715882.1 ProteinModelPortal:Q8EK58 SMR:Q8EK58
GeneID:1168125 KEGG:son:SO_0242 PATRIC:23520177 Uniprot:Q8EK58
Length = 104
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVR 62
EAPI ASNV + +PVTGK +VG ++ EDG KVR
Sbjct: 62 EAPIQASNVAIFNPVTGKADRVGFRF-EDGKKVR 94
>GENEDB_PFALCIPARUM|PFL1150c [details] [associations]
symbol:PFL1150c "ribosomal protein L24,
putative" species:5833 "Plasmodium falciparum" [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
Length = 227
Score = 102 (41.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRP 77
T E PIH +NV +LDP++ KP V +Y+ +G VR+++ SG +P P
Sbjct: 110 TQEMPIHITNVSLLDPISKKPTVVKRRYMMNGECVRISK---ISGCAMPEP 157
>UNIPROTKB|Q8I5H8 [details] [associations]
symbol:PFL1150c "Mitochondrial ribosomal protein L24-2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
Length = 227
Score = 102 (41.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRP 77
T E PIH +NV +LDP++ KP V +Y+ +G VR+++ SG +P P
Sbjct: 110 TQEMPIHITNVSLLDPISKKPTVVKRRYMMNGECVRISK---ISGCAMPEP 157
>TIGR_CMR|CBU_0249 [details] [associations]
symbol:CBU_0249 "ribosomal protein L24" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:VIQAYPA RefSeq:NP_819293.1 ProteinModelPortal:Q83ER5 SMR:Q83ER5
PRIDE:Q83ER5 GeneID:1208130 KEGG:cbu:CBU_0249 PATRIC:17929191
BioCyc:CBUR227377:GJ7S-255-MONOMER Uniprot:Q83ER5
Length = 107
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 29 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
E IH SNV + +P K +VG K LEDG+KVR+ + G
Sbjct: 63 ELSIHVSNVAIYNPAAKKADRVGIKTLEDGSKVRIFKSNG 102
>UNIPROTKB|Q29MA5 [details] [associations]
symbol:mRpL24 "Probable 39S ribosomal protein L24,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH379060
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 OrthoDB:EOG405QH6
RefSeq:XP_001356724.1 ProteinModelPortal:Q29MA5 GeneID:4817158
KEGG:dpo:Dpse_GA21365 FlyBase:FBgn0081353 InParanoid:Q29MA5
OMA:RTPAKSY Uniprot:Q29MA5
Length = 247
Score = 96 (38.9 bits), Expect = 0.00017, P = 0.00017
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 29 EAPIHASN-VQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR---T 84
EAP+H N ++++DP + ++ E+G KVRV+ SG IIP PE
Sbjct: 140 EAPLHVLNDIRLVDPSDLLGTEFEWRFTEEGEKVRVSM---RSGRIIPIPETNNQTHDYK 196
Query: 85 TPRPTVAGPKDTPVDLVMKKTYDAK 109
TP + KDTP +V + T+ K
Sbjct: 197 TPNAYIEREKDTPAAVVGEITFQPK 221
>UNIPROTKB|P60627 [details] [associations]
symbol:rplX "50S ribosomal protein L24" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:VIQAYPA PIR:F70643 RefSeq:NP_215229.1 RefSeq:NP_335160.1
RefSeq:YP_006514059.1 ProteinModelPortal:P60627 SMR:P60627
PRIDE:P60627 EnsemblBacteria:EBMYCT00000000150
EnsemblBacteria:EBMYCT00000071486 GeneID:13318604 GeneID:888421
GeneID:926033 KEGG:mtc:MT0741.1 KEGG:mtu:Rv0715 KEGG:mtv:RVBD_0715
PATRIC:18123363 TubercuList:Rv0715 Uniprot:P60627
Length = 105
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 27 TVEAPIHASNVQVLDPVTGKPCKVGTKYLED-GTKVRVARGIG 68
T EAPIH SNV V+D GKP ++G + E+ G +VR+++ G
Sbjct: 61 TQEAPIHVSNVMVVDS-DGKPTRIGYRVDEETGKRVRISKRNG 102
>FB|FBgn0031651 [details] [associations]
symbol:mRpL24 "mitochondrial ribosomal protein L24"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
EMBL:AE014134 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
GeneTree:ENSGT00390000014542 HSSP:Q9RXJ1 EMBL:AY095024
RefSeq:NP_523476.1 UniGene:Dm.301 ProteinModelPortal:Q9VMY1
SMR:Q9VMY1 IntAct:Q9VMY1 MINT:MINT-853395 STRING:Q9VMY1
PaxDb:Q9VMY1 PRIDE:Q9VMY1 EnsemblMetazoa:FBtr0079058 GeneID:33703
KEGG:dme:Dmel_CG8849 FlyBase:FBgn0031651 InParanoid:Q9VMY1
OMA:GERKWRD OrthoDB:EOG405QH6 PhylomeDB:Q9VMY1 GenomeRNAi:33703
NextBio:784866 Bgee:Q9VMY1 Uniprot:Q9VMY1
Length = 247
Score = 91 (37.1 bits), Expect = 0.00062, P = 0.00062
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 29 EAPIHAS-NVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR---T 84
EAP+H + +++++DP + ++ E+G KVRV+ SG IIP PE
Sbjct: 140 EAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSL---RSGRIIPIPETNNQTHDYK 196
Query: 85 TPRPTVAGPKDTPVDLVMKKTYDAK 109
TP + KDTP +V + T+ K
Sbjct: 197 TPNAYIEREKDTPGAVVGEITFQPK 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 117 103 0.00091 102 3 11 22 0.44 30
29 0.49 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 521 (55 KB)
Total size of DFA: 106 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.58u 0.10s 11.68t Elapsed: 00:00:00
Total cpu time: 11.58u 0.10s 11.68t Elapsed: 00:00:00
Start: Mon May 20 23:36:46 2013 End: Mon May 20 23:36:46 2013