BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033541
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8F2D6|RL24_RICM5 50S ribosomal protein L24 OS=Rickettsia massiliae (strain Mtu5)
GN=rplX PE=3 SV=1
Length = 109
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKSNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|C4K2G8|RL24_RICPU 50S ribosomal protein L24 OS=Rickettsia peacockii (strain Rustic)
GN=rplX PE=3 SV=1
Length = 109
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKSNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|Q92GX7|RL24_RICCN 50S ribosomal protein L24 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rplX PE=3 SV=1
Length = 109
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKSNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|C3PP96|RL24_RICAE 50S ribosomal protein L24 OS=Rickettsia africae (strain ESF-5)
GN=rplX PE=3 SV=1
Length = 109
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKSNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|Q9ZCR6|RL24_RICPR 50S ribosomal protein L24 OS=Rickettsia prowazekii (strain Madrid
E) GN=rplX PE=3 SV=1
Length = 113
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E+PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKPNKMSEGGIITQESPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|Q68W89|RL24_RICTY 50S ribosomal protein L24 OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rplX PE=3 SV=1
Length = 113
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E+PIH SNV +DP TG P KV K+LEDG+KVR+A+ S
Sbjct: 44 VKKHTKPNKMSEGGIITKESPIHISNVAHIDPKTGNPTKVAFKFLEDGSKVRIAK---KS 100
Query: 71 GSIIPR 76
G II +
Sbjct: 101 GEIIGK 106
>sp|Q4UMR8|RL24_RICFE 50S ribosomal protein L24 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=rplX PE=3 SV=1
Length = 109
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKPNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|A8GT58|RL24_RICRS 50S ribosomal protein L24 OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rplX PE=3 SV=1
Length = 109
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKPNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|B0BUP9|RL24_RICRO 50S ribosomal protein L24 OS=Rickettsia rickettsii (strain Iowa)
GN=rplX PE=3 SV=1
Length = 109
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKPNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|A0L5Y4|RL24_MAGSM 50S ribosomal protein L24 OS=Magnetococcus sp. (strain MC-1)
GN=rplX PE=3 SV=1
Length = 112
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%)
Query: 4 LIWICVQVKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRV 63
L+ +K+H K + EGGI EAPIH SNV ++DP TGK ++ K LEDG KVRV
Sbjct: 43 LVEKVNMIKRHTKPAQNREGGIVEKEAPIHISNVMIVDPATGKATRIKKKNLEDGRKVRV 102
Query: 64 ARGIG 68
A G G
Sbjct: 103 AAGSG 107
>sp|A8EZK5|RL24_RICCK 50S ribosomal protein L24 OS=Rickettsia canadensis (strain McKiel)
GN=rplX PE=3 SV=1
Length = 109
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PIH SN+ +DP TG+P KV K+LEDG+KVRVA+ S
Sbjct: 44 VKKHTKPNQMSEGGIRTKELPIHISNIAHIDPKTGRPTKVVFKFLEDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|A7IPQ9|RL24_XANP2 50S ribosomal protein L24 OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=rplX PE=3 SV=1
Length = 105
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VK+H + EGGI + EAPI SNV V DP GKP +VG + LEDGTKVRVA+ G
Sbjct: 43 VKRHQRQTANQEGGIISKEAPIQLSNVAVADPKDGKPTRVGFQVLEDGTKVRVAKRSG 100
>sp|Q1RHN2|RL24_RICBR 50S ribosomal protein L24 OS=Rickettsia bellii (strain RML369-C)
GN=rplX PE=3 SV=1
Length = 109
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + EGGI T E PI SNV +DP TG P KV K+LEDG+KVR+A+ S
Sbjct: 44 VKKHTKPTKVSEGGIITKELPIDISNVAHVDPKTGNPTKVAFKFLEDGSKVRIAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|A8LC45|RL24_FRASN 50S ribosomal protein L24 OS=Frankia sp. (strain EAN1pec) GN=rplX
PE=3 SV=1
Length = 108
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 21 HEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
GGI T EAPIH SNV ++DP G+P +VG ++ +DGTKVR++R GA
Sbjct: 58 QSGGIVTQEAPIHVSNVMIVDPSDGRPTRVGYRFNDDGTKVRISRRTGA 106
>sp|B6IRR7|RL24_RHOCS 50S ribosomal protein L24 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplX PE=3 SV=1
Length = 105
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH + +GGI +EA +H SNV +DP T KP +VG K LEDG KVRVA+ AS
Sbjct: 43 VKKHQRPTPTQQGGIVEIEAALHVSNVAHIDPKTSKPTRVGFKTLEDGRKVRVAK---AS 99
Query: 71 GSII 74
G II
Sbjct: 100 GEII 103
>sp|A5FZV4|RL24_ACICJ 50S ribosomal protein L24 OS=Acidiphilium cryptum (strain JF-5)
GN=rplX PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 12 KKHIKG-GEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVAR 65
K+H K G G +GGI E P+H SN+ ++DP T KP +VG + LEDG KVRVAR
Sbjct: 44 KRHTKARGMGEQGGIIQKEMPVHLSNIALIDPETKKPTRVGFRVLEDGRKVRVAR 98
>sp|A8IAQ5|RL24_AZOC5 50S ribosomal protein L24 OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=rplX PE=3 SV=1
Length = 106
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VK+H + EGGI + EAPIH SN+ V DP GKP +VG + L+DG KVRVA+ G
Sbjct: 44 VKRHQRQTAQSEGGIISKEAPIHLSNIAVADPKDGKPTRVGFEVLDDGRKVRVAKRSG 101
>sp|Q98N46|RL24_RHILO 50S ribosomal protein L24 OS=Rhizobium loti (strain MAFF303099)
GN=rplX PE=3 SV=1
Length = 104
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 2 TPLIWICVQVKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKV 61
T L+ +++H K + EGGI T EAPI SN+ + DP GKP +VG + +DG KV
Sbjct: 33 TALVRGVNMIRRHQKQSQSQEGGIITKEAPIQLSNIALADPKDGKPTRVGFIFQKDGKKV 92
Query: 62 RVARGIGASGSII 74
RVA+ SG +I
Sbjct: 93 RVAK---RSGEVI 102
>sp|Q0RRR0|RL24_FRAAA 50S ribosomal protein L24 OS=Frankia alni (strain ACN14a) GN=rplX
PE=3 SV=1
Length = 110
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 10 QVKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
+V++ +G + GGI T EAPIH SNV ++DP G+P ++G + EDGTKVR++R GA
Sbjct: 51 RVQQSARGSQ--SGGIVTQEAPIHVSNVMIVDPSDGRPTRIGYRINEDGTKVRISRRTGA 108
>sp|Q11HR3|RL24_MESSB 50S ribosomal protein L24 OS=Mesorhizobium sp. (strain BNC1)
GN=rplX PE=3 SV=1
Length = 104
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
V++H K EGGI T EAPIH SN+ + DP GKP +VG K EDG KVRVA+ S
Sbjct: 42 VRRHQKQTPQAEGGIITKEAPIHVSNLALADPKDGKPTRVGFKIQEDGKKVRVAK---RS 98
Query: 71 GSII 74
G +I
Sbjct: 99 GELI 102
>sp|Q5FTZ4|RL24_GLUOX 50S ribosomal protein L24 OS=Gluconobacter oxydans (strain 621H)
GN=rplX PE=3 SV=1
Length = 106
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Query: 12 KKHIKGGE-GHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
K+H K G EGGI E PIH SN++++DP +GKP +VG + LEDG KVRVA+ A+
Sbjct: 44 KRHTKPNRMGGEGGIIEREMPIHLSNLKLVDPKSGKPTRVGFRILEDGRKVRVAK---AT 100
Query: 71 GSII 74
G +I
Sbjct: 101 GEVI 104
>sp|Q7UN09|RL24_RHOBA 50S ribosomal protein L24 OS=Rhodopirellula baltica (strain SH1)
GN=rplX PE=3 SV=1
Length = 115
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 8 CVQVKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARG 66
+V KH++ + + +GG E P+ ASNV ++DP TGKP ++G +YLEDG+K R A+
Sbjct: 38 AARVWKHVRQSQKNPQGGRLNKEMPMSASNVMLVDPSTGKPTRIGVRYLEDGSKERFAKA 97
Query: 67 IGAS 70
G S
Sbjct: 98 SGES 101
>sp|A9H3N1|RL24_GLUDA 50S ribosomal protein L24 OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rplX PE=3 SV=1
Length = 107
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 20 GHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
G +GGI E PIH SN++++DP +GKP +VG + LEDG KVRVA+ G
Sbjct: 54 GEQGGIIEKEMPIHLSNLKLVDPKSGKPTRVGFRILEDGRKVRVAKATG 102
>sp|Q2JFG5|RL24_FRASC 50S ribosomal protein L24 OS=Frankia sp. (strain CcI3) GN=rplX PE=3
SV=1
Length = 108
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 LIWICVQVKKHIKGGEG----HEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGT 59
L+ ++ +H + +G GGI T EAPIH SNV ++DP GKP ++G + +DGT
Sbjct: 37 LVEGANRITRHTRVQQGTRGSQSGGIITQEAPIHVSNVMIVDPSDGKPTRIGYRINDDGT 96
Query: 60 KVRVARGIG 68
KVRV+R G
Sbjct: 97 KVRVSRRTG 105
>sp|A8GPD9|RL24_RICAH 50S ribosomal protein L24 OS=Rickettsia akari (strain Hartford)
GN=rplX PE=3 SV=1
Length = 109
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VKKH K + GGI T E PIH SN+ +DP TG P KV K L+DG+KVRVA+ S
Sbjct: 44 VKKHTKPNQMSGGGIITKELPIHISNIAHIDPKTGDPTKVAFKCLDDGSKVRVAK---KS 100
Query: 71 GSII 74
G II
Sbjct: 101 GEII 104
>sp|A9VP88|RL24_BACWK 50S ribosomal protein L24 OS=Bacillus weihenstephanensis (strain
KBAB4) GN=rplX PE=3 SV=1
Length = 103
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV VLDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMVLDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q6HPP7|RL24_BACHK 50S ribosomal protein L24 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q63H79|RL24_BACCZ 50S ribosomal protein L24 OS=Bacillus cereus (strain ZK / E33L)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q81J31|RL24_BACCR 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B9IZK5|RL24_BACCQ 50S ribosomal protein L24 OS=Bacillus cereus (strain Q1) GN=rplX
PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7HQV5|RL24_BACC7 50S ribosomal protein L24 OS=Bacillus cereus (strain AH187)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7HJ59|RL24_BACC4 50S ribosomal protein L24 OS=Bacillus cereus (strain B4264)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C1ET50|RL24_BACC3 50S ribosomal protein L24 OS=Bacillus cereus (strain 03BB102)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7IT30|RL24_BACC2 50S ribosomal protein L24 OS=Bacillus cereus (strain G9842)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q73F85|RL24_BACC1 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 10987)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7JKD0|RL24_BACC0 50S ribosomal protein L24 OS=Bacillus cereus (strain AH820)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q81VR9|RL24_BACAN 50S ribosomal protein L24 OS=Bacillus anthracis GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|A0R8J1|RL24_BACAH 50S ribosomal protein L24 OS=Bacillus thuringiensis (strain Al
Hakam) GN=rplX PE=3 SV=2
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C3LJ93|RL24_BACAC 50S ribosomal protein L24 OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C3P9R6|RL24_BACAA 50S ribosomal protein L24 OS=Bacillus anthracis (strain A0248)
GN=rplX PE=3 SV=1
Length = 103
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 68
VKKH K + + +GGI T EAPIH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 41 VKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q9CQ06|RM24_MOUSE 39S ribosomal protein L24, mitochondrial OS=Mus musculus GN=Mrpl24
PE=2 SV=1
Length = 216
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 13 KHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGS 72
++I + H G + EAP+ V+++DPV KP ++ ++ E G +VRV+ SG
Sbjct: 96 RYIGRTKDHRGTMIASEAPLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVS---TRSGR 152
Query: 73 IIPRPEILKIR-TTPRPTVAGPKDTPVDLVMKKTY 106
IIP+PE + P GPKDT V+ +++TY
Sbjct: 153 IIPKPEFPRADGIVPETWTDGPKDTSVEDALERTY 187
>sp|B9DM36|RL24_STACT 50S ribosomal protein L24 OS=Staphylococcus carnosus (strain TM300)
GN=rplX PE=3 SV=1
Length = 105
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
+KKH K + + EGGI EAPIH SNVQ+LDP T +P +VG K++ DG K+R+A+ G
Sbjct: 41 IKKHQKPTQFNPEGGILETEAPIHVSNVQLLDPKTNEPTRVGYKFV-DGKKIRIAKKSGE 99
Query: 70 S 70
Sbjct: 100 E 100
>sp|B8IS96|RL24_METNO 50S ribosomal protein L24 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rplX PE=3 SV=1
Length = 105
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 70
VK+H + + EGGI + EA I SN+ V DP GKP +VG + LEDG KVR A+ S
Sbjct: 43 VKRHQRQTQAQEGGIISKEAAIDLSNLAVADPKDGKPTRVGFRILEDGRKVRFAK---RS 99
Query: 71 GSII 74
G +I
Sbjct: 100 GDLI 103
>sp|B9E9K2|RL24_MACCJ 50S ribosomal protein L24 OS=Macrococcus caseolyticus (strain
JCSC5402) GN=rplX PE=3 SV=1
Length = 102
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 11 VKKHIKGGEGH-EGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VKKH K + + EGGI EA IH SNV +LDP T KP +VGTK +EDG KVRVA+
Sbjct: 41 VKKHQKPTQMNPEGGITEFEAAIHVSNVMLLDPKTNKPTRVGTK-IEDGKKVRVAK---K 96
Query: 70 SGSII 74
SG II
Sbjct: 97 SGEII 101
>sp|Q03ZN4|RL24_LEUMM 50S ribosomal protein L24 OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=rplX PE=3
SV=1
Length = 102
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 11 VKKHIK-GGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VKKH K E +GG+ +EAPIH SNVQ+LDP T +P +VG K +EDG K+RV++
Sbjct: 41 VKKHQKPSNEYPQGGVIDIEAPIHVSNVQLLDPSTNEPTRVGFK-VEDGKKIRVSK---K 96
Query: 70 SGSII 74
SG+++
Sbjct: 97 SGNVL 101
>sp|Q8G084|RL24_BRUSU 50S ribosomal protein L24 OS=Brucella suis biovar 1 (strain 1330)
GN=rplX PE=3 SV=1
Length = 103
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VK+H + + E GI + EAPIH SN+ + DP GKP +VG + +EDG KVRVA+ GA
Sbjct: 42 VKRHQRQTQTQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGA 99
>sp|B0CH21|RL24_BRUSI 50S ribosomal protein L24 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplX PE=3 SV=1
Length = 103
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VK+H + + E GI + EAPIH SN+ + DP GKP +VG + +EDG KVRVA+ GA
Sbjct: 42 VKRHQRQTQTQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGA 99
>sp|Q8YHM9|RL24_BRUME 50S ribosomal protein L24 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=rplX PE=3
SV=1
Length = 103
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VK+H + + E GI + EAPIH SN+ + DP GKP +VG + +EDG KVRVA+ GA
Sbjct: 42 VKRHQRQTQTQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGA 99
>sp|C0RJJ0|RL24_BRUMB 50S ribosomal protein L24 OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=rplX PE=3 SV=1
Length = 103
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VK+H + + E GI + EAPIH SN+ + DP GKP +VG + +EDG KVRVA+ GA
Sbjct: 42 VKRHQRQTQTQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGA 99
>sp|A9M5N9|RL24_BRUC2 50S ribosomal protein L24 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplX PE=3 SV=1
Length = 103
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 11 VKKHIKGGEGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 69
VK+H + + E GI + EAPIH SN+ + DP GKP +VG + +EDG KVRVA+ GA
Sbjct: 42 VKRHQRQTQTQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGA 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,417,819
Number of Sequences: 539616
Number of extensions: 2153238
Number of successful extensions: 5362
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 4644
Number of HSP's gapped (non-prelim): 765
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)