BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033542
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=At2g20740 PE=2 SV=1
Length = 221
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 25/107 (23%)
Query: 4 RGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRPMLM 63
R CL+ +LKL+N L+ + G+AM+ Y ++L +++ Q+G
Sbjct: 6 RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQE-----------------QMGN---- 44
Query: 64 AVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
+ ADS P WFIY F+G+G +L V++C G I+A T NGCCL
Sbjct: 45 -LPFADS---DHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCL 87
>sp|Q93XY5|TET18_ARATH Tetraspanin-18 OS=Arabidopsis thaliana GN=At2g20230 PE=2 SV=1
Length = 270
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKR---VDNLGTVSPVSGDEGFVQLGR 59
C LK+LNF+ G++++ Y I++ EY R VD + S SG E +
Sbjct: 6 CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65
Query: 60 PMLMAVSLADSI----------FD----KLPKAWFIYLFIGVGVVLFVISCVGCISATTR 105
P+ + SI F+ LP WFIY F+ VG+++ +++ +G I+A
Sbjct: 66 PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125
Query: 106 NGCCL 110
NGCCL
Sbjct: 126 NGCCL 130
>sp|Q9SVU4|TET20_ARATH Tetraspanin-20 OS=Arabidopsis thaliana GN=At4g28770 PE=2 SV=1
Length = 281
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 28/136 (20%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKR-----------------------V 39
C +LK+LNFL G++++ Y I++ +Y
Sbjct: 6 CHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFS 65
Query: 40 DNLGTVSPVSGD-EGFVQLGRPMLMAVSLADSIFD----KLPKAWFIYLFIGVGVVLFVI 94
+++ ++ VS + + +++ DS F+ LP WFIY F+ +G+++ ++
Sbjct: 66 NSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIV 125
Query: 95 SCVGCISATTRNGCCL 110
+ +G I+A NGCCL
Sbjct: 126 TIIGFIAAEAINGCCL 141
>sp|Q3ZCD0|CD81_BOVIN CD81 antigen OS=Bos taurus GN=CD81 PE=2 SV=1
Length = 236
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ LAG ++G ++L R D P + + +++LG RP
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDRPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q6AYR9|TSN1_RAT Tetraspanin-1 OS=Rattus norvegicus GN=Tspan1 PE=2 SV=1
Length = 241
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVE-YKRVDNLGTVSPVSGDEGFVQLGR 59
M C ++ ++ L N L+ L G A++ GI++ V+ + G++S S FV +G
Sbjct: 1 MQCFKFIKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLS--SSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
Y I G VLF++ +GC A + N C L
Sbjct: 58 ----------------------YFLIAAGAVLFILGFLGCYGAHSENKCVL 86
>sp|Q9N0J9|CD81_SAGOE CD81 protein OS=Saguinus oedipus GN=CD81 PE=2 SV=1
Length = 236
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ LAG ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|P40239|CD9_FELCA CD9 antigen OS=Felis catus GN=CD9 PE=2 SV=2
Length = 226
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 37/117 (31%)
Query: 1 MACRGCLECLLKLL---NFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQL 57
M +G +C+ LL NF+ LAG+A++ G++L R D
Sbjct: 1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAVGLWL-----RFD----------------- 38
Query: 58 GRPMLMAVSLADSIF--DKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
S SIF D P +++ +Y+ IG G ++ ++ +GC A + C L
Sbjct: 39 --------SQTKSIFEQDSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 87
>sp|P60034|CD81_PANTR CD81 antigen OS=Pan troglodytes GN=CD81 PE=2 SV=1
Length = 236
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ LAG ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|P60033|CD81_HUMAN CD81 antigen OS=Homo sapiens GN=CD81 PE=1 SV=1
Length = 236
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ LAG ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|O97703|CD81_CHLAE CD81 antigen OS=Chlorocebus aethiops GN=CD81 PE=2 SV=1
Length = 236
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ LAG ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q99J59|TSN1_MOUSE Tetraspanin-1 OS=Mus musculus GN=Tspan1 PE=2 SV=1
Length = 240
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVE-YKRVDNLGTVSPVSGDEGFVQLGR 59
M C ++ ++ L N L+ L G A++ GI++ V+ + G++S S FV +G
Sbjct: 1 MQCFKFIKVMMFLFNLLIFLCGAALLAVGIWVSVDGTSFLKVFGSLS--SSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
Y I G VLF++ +GC A + N C L
Sbjct: 58 ----------------------YFLIAAGAVLFILGFLGCYGAHSENKCVL 86
>sp|O75954|TSN9_HUMAN Tetraspanin-9 OS=Homo sapiens GN=TSPAN9 PE=1 SV=1
Length = 239
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
L A +L I +G ++ V +GC+ A N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKCLL 83
>sp|Q8BJU2|TSN9_MOUSE Tetraspanin-9 OS=Mus musculus GN=Tspan9 PE=1 SV=1
Length = 239
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYTMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
L A +L I +G ++ V +GC+ A N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKCLL 83
>sp|B0BM39|TSN9_XENTR Tetraspanin-9 OS=Xenopus tropicalis GN=tspan9 PE=2 SV=1
Length = 239
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 32/108 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGC 108
L A +L I +G ++ V +GC+ A N C
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKC 81
>sp|B3VSC2|TSN9_SHEEP Tetraspanin-9 OS=Ovis aries GN=TSPAN9 PE=2 SV=1
Length = 239
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYAMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
L A +L I +G ++ V +GC+ A N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENRCLL 83
>sp|Q06AA5|TSN9_PIG Tetraspanin-9 OS=Sus scrofa GN=TSPAN9 PE=2 SV=1
Length = 239
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
L A +L I +G ++ V +GC+ A N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENRCLL 83
>sp|P35762|CD81_MOUSE CD81 antigen OS=Mus musculus GN=Cd81 PE=1 SV=2
Length = 236
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRPML 62
C C++ LL + NF+ LAG ++G ++L R D P + +++LG
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTSLLYLELGNK-- 52
Query: 63 MAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 53 -----------PAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q5RC27|TSN1_PONAB Tetraspanin-1 OS=Pongo abelii GN=TSPAN1 PE=2 SV=1
Length = 241
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ L G A++ GI++ ++ L P+S FV +G
Sbjct: 1 MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSIDGASF--LKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
Y I GVV+F + +GC A T + C L
Sbjct: 58 ----------------------YFLIAAGVVVFALGFLGCYGAKTESKCAL 86
>sp|O60635|TSN1_HUMAN Tetraspanin-1 OS=Homo sapiens GN=TSPAN1 PE=1 SV=2
Length = 241
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ L G A++ GI++ ++ L P+S FV +G
Sbjct: 1 MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSIDGASF--LKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
Y I GVV+F + +GC A T + C L
Sbjct: 58 ----------------------YFLIAAGVVVFALGFLGCYGAKTESKCAL 86
>sp|P16297|IL2RB_MOUSE Interleukin-2 receptor subunit beta OS=Mus musculus GN=Il2rb PE=2
SV=1
Length = 539
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 28 YGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRPMLMAVSLADSIFDKLPKAWFIYLFIGV 87
Y + + V+ +R +N GT SP S +P+ AD + + LP +W YL + +
Sbjct: 205 YEVQVRVKAQR-NNTGTWSPWS---------QPLTFRTRPADPMKEILPMSWLRYLLLVL 254
Query: 88 GVVLFVISCV 97
G SCV
Sbjct: 255 GCFSGFFSCV 264
>sp|Q3T0S3|TSN1_BOVIN Tetraspanin-1 OS=Bos taurus GN=TSPAN1 PE=2 SV=1
Length = 241
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
M C ++ ++ L N L+ L G A++ GI++ V+ FV++ P
Sbjct: 1 MGCFNFIKVMMILFNMLIFLCGAALLAVGIWVSVD---------------GPSFVKIFGP 45
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
M + S + +F+ I G VLF + +GC A T + C L
Sbjct: 46 M------SSSAMQFVNVGYFL---IAAGAVLFALGFLGCYGAQTESKCAL 86
>sp|Q62745|CD81_RAT CD81 antigen OS=Rattus norvegicus GN=Cd81 PE=1 SV=1
Length = 236
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 26/110 (23%)
Query: 3 CRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRPML 62
C C++ LL + NF+ LAG ++G ++L R D T L
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHDPQTTT----------------L 44
Query: 63 MAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCISATTRNGCCL 110
+ + L D P ++ IY+ I VG V+ + +GC A + C L
Sbjct: 45 LYLELGDK---PAPSTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 6 CLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRPMLMAV 65
C++ + N + G+A +G G++ + E + N+ +++ + G
Sbjct: 14 CIKYFIFGFNVIFWFLGIAFLGIGLWAWNEKGVLSNISSITDLGG--------------- 58
Query: 66 SLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCLTCVSLVL 117
FD ++LF+ VG V+F++ GCI A N L S+ L
Sbjct: 59 ------FDP------VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFL 98
>sp|Q6DCQ3|TSN9_XENLA Tetraspanin-9 OS=Xenopus laevis GN=tspan9 PE=2 SV=1
Length = 239
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 32/108 (29%)
Query: 4 RGCLECL---LKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + L G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQ---GNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGC 108
L A +L I +G V+ V +GC+ A N C
Sbjct: 50 SLSAANLV----------------IVIGTVVMVTGFLGCLGAIKENKC 81
>sp|Q9K0I2|PPSA_NEIMB Phosphoenolpyruvate synthase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=ppsA PE=1 SV=1
Length = 794
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 44 TVSPVSGDEGFVQLGRPMLMAVSLADSIFDKLPKA 78
TVS GD GF+ G L+ V + D D +PKA
Sbjct: 452 TVSCAEGDTGFIYAG---LLDVQITDVALDNMPKA 483
>sp|Q6GQF5|TSN33_XENLA Tetraspanin-33 OS=Xenopus laevis GN=tspan33 PE=2 SV=1
Length = 268
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 83 LFIGVGVVLFVISCVGCISATTRNGCCLTCVSLVL 117
L IGVG+++F+I+ GCI + N C L S+ L
Sbjct: 66 LLIGVGILMFLITFCGCIGSLRENICLLQTFSICL 100
>sp|Q9JJW1|TSN2_RAT Tetraspanin-2 OS=Rattus norvegicus GN=Tspan2 PE=1 SV=1
Length = 221
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 33/112 (29%)
Query: 4 RGCLECLLKLL---NFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RG L C+ LL N L LAG A++ +G++ GT+ +S +E
Sbjct: 5 RGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFG-------GTIKDLSSEE-------- 49
Query: 61 MLMAVSLADSIFDKLPKAWFI--YLFIGVGVVLFVISCVGCISATTRNGCCL 110
K P+ +++ Y+ +G G ++ + GC A + C L
Sbjct: 50 -------------KSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88
>sp|Q922J6|TSN2_MOUSE Tetraspanin-2 OS=Mus musculus GN=Tspan2 PE=1 SV=1
Length = 221
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 33/112 (29%)
Query: 4 RGCLECLLKLL---NFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RG L C+ LL N L LAG A++ +G++ GT+ +S +
Sbjct: 5 RGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFG-------GTMKDLSSE--------- 48
Query: 61 MLMAVSLADSIFDKLPKAWFI--YLFIGVGVVLFVISCVGCISATTRNGCCL 110
DK P+ +++ Y+ +G G ++ + GC A + C L
Sbjct: 49 ------------DKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88
>sp|Q6GMK6|TSN9_DANRE Tetraspanin-9 OS=Danio rerio GN=tspan9 PE=2 SV=1
Length = 239
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 32/110 (29%)
Query: 4 RGCLEC---LLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDEGFVQLGRP 60
RGCL C ++ L N L L+G ++G GI+L V + T SP P
Sbjct: 3 RGCLCCVKYMMFLFNLLFWLSGCGLLGVGIWLSVSQ---GSFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
L A +L I +G V+ V +GC+ A N C L
Sbjct: 50 SLSAANLV----------------ITLGSVVMVTGFLGCLGAIKENKCLL 83
>sp|Q4R7W6|TSN1_MACFA Tetraspanin-1 OS=Macaca fascicularis GN=TSPAN1 PE=2 SV=1
Length = 240
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTLAGLAMVGYGIYLFVEYKRVDNLGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ L G A++ GI++ ++ L P+S FV +G
Sbjct: 1 MQCFSFIKTIMILFNLLIFLCGAALLAVGIWVSIDGASF--LKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCISATTRNGCCL 110
Y I G V+F + +GC A T + C L
Sbjct: 58 ----------------------YFLIAAGAVVFALGFLGCYGAQTESKCAL 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.147 0.471
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,252,681
Number of Sequences: 539616
Number of extensions: 1528176
Number of successful extensions: 4554
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4469
Number of HSP's gapped (non-prelim): 94
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)