BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033561
(116 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343887314|dbj|BAK61860.1| hypothetical protein [Citrus unshiu]
Length = 123
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/123 (92%), Positives = 115/123 (93%), Gaps = 7/123 (5%)
Query: 1 MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA
Sbjct: 1 MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
Query: 61 VTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPV 113
VTGLTAAALTASM AAG GLSPSLKNFLLSIVAGGVVLAA+VGAVIGVANFDPV
Sbjct: 61 VTGLTAAALTASMVIPEVAEAAGPGLSPSLKNFLLSIVAGGVVLAALVGAVIGVANFDPV 120
Query: 114 KRT 116
KRT
Sbjct: 121 KRT 123
>gi|224092099|ref|XP_002309472.1| predicted protein [Populus trichocarpa]
gi|222855448|gb|EEE92995.1| predicted protein [Populus trichocarpa]
Length = 124
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/124 (73%), Positives = 102/124 (82%), Gaps = 8/124 (6%)
Query: 1 MASVSMAMPLSSATQNRLIQP-SSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEK 59
MASVSMAMPL+SA+Q RL QP +S+SFLKPLP+RPS K KSRARL+VQASLKEK
Sbjct: 1 MASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKEK 60
Query: 60 AVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDP 112
AVTGLTAAALTASM AAG G+SPSLKNFLLSI AGGVV AI+GAV+GV+NFDP
Sbjct: 61 AVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGVVAVAIIGAVLGVSNFDP 120
Query: 113 VKRT 116
VKR+
Sbjct: 121 VKRS 124
>gi|296081701|emb|CBI20706.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 106/124 (85%), Gaps = 9/124 (7%)
Query: 1 MASVSMAMPLSSATQNRLIQ-PSSESFLKPLPVRPSKAARFLGKPKSR-ARLQVQASLKE 58
MASVSMAM L+SA+QNRL+Q P+SE+F +PL V+PSK A + KPKSR +RL+V+ASLKE
Sbjct: 1 MASVSMAMRLTSASQNRLLQRPTSEAFFQPLQVKPSKKAVAV-KPKSRGSRLEVKASLKE 59
Query: 59 KAVTGLTAAALTASMA------AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDP 112
KA+TGLTAAALTASM A SG+SPSLKNFLLSIVAGGVVL AIVGAVIGVANFDP
Sbjct: 60 KAITGLTAAALTASMVLPEAAEAASGVSPSLKNFLLSIVAGGVVLGAIVGAVIGVANFDP 119
Query: 113 VKRT 116
VKRT
Sbjct: 120 VKRT 123
>gi|255546007|ref|XP_002514063.1| conserved hypothetical protein [Ricinus communis]
gi|223546519|gb|EEF48017.1| conserved hypothetical protein [Ricinus communis]
Length = 121
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 99/122 (81%), Gaps = 12/122 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMAMP++SA+Q ++ PSSE+F KPLP+R SKA KS + QV+ASLKEKA+
Sbjct: 5 SAVSMAMPITSASQKKV--PSSEAFFKPLPLRQSKAVM---ASKSNGKFQVKASLKEKAI 59
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTAAALTASM AAGSG+SPSLKNFLLSIVAGGVVL AIVGA+IGVANFDPVK
Sbjct: 60 TGLTAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVK 119
Query: 115 RT 116
R+
Sbjct: 120 RS 121
>gi|388522391|gb|AFK49257.1| unknown [Lotus japonicus]
Length = 123
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 90/121 (74%), Gaps = 9/121 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
ASV MA+ LSS T N+L PSS+SF +PLP+R +K KP S+++ + ASLKEKAV
Sbjct: 4 ASVPMALSLSSVTHNKLNNPSSQSFFQPLPIRQNKT--LFAKPSSKSKHGIHASLKEKAV 61
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
GLTAA++TASM AAG+ L+PSLKNFLLSI AGGVVL AI AVIGV+NFDPVK
Sbjct: 62 AGLTAASMTASMVIPEVANAAGNDLTPSLKNFLLSIAAGGVVLTAIFAAVIGVSNFDPVK 121
Query: 115 R 115
R
Sbjct: 122 R 122
>gi|224122446|ref|XP_002330483.1| predicted protein [Populus trichocarpa]
gi|222872417|gb|EEF09548.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 91/122 (74%), Gaps = 11/122 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMAMPL+ A+ R P+SE+F KPLPVRPSKA + R QV+ASLKEK V
Sbjct: 5 SAVSMAMPLTHAS--RKAAPTSEAFFKPLPVRPSKA--IAAASRCNGRFQVKASLKEKVV 60
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALT SM AAG G+SPSL NFLLSIVAGGVVLAAI GAV+GV+NFDPV+
Sbjct: 61 TGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDPVR 120
Query: 115 RT 116
R+
Sbjct: 121 RS 122
>gi|357465827|ref|XP_003603198.1| Ultraviolet-B-repressible protein [Medicago truncatula]
gi|355492246|gb|AES73449.1| Ultraviolet-B-repressible protein [Medicago truncatula]
gi|388516387|gb|AFK46255.1| unknown [Medicago truncatula]
Length = 120
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 91/120 (75%), Gaps = 12/120 (10%)
Query: 3 SVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVT 62
SV+ A+PL SATQN+L PSSESF +PLP+ K +S++++++ ASLKEKAVT
Sbjct: 5 SVATALPLGSATQNKLKNPSSESFFRPLPITQPKRIT-----QSKSKVEINASLKEKAVT 59
Query: 63 GLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+TAA+LTASM AAGS LSPSL+NFLLSI AGG VL AI+GAVIGV+NFDPVKR
Sbjct: 60 AITAASLTASMVIPDVAHAAGSDLSPSLQNFLLSIFAGGAVLTAILGAVIGVSNFDPVKR 119
>gi|118489268|gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 121
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 12/121 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMA+PL+ A+Q R+ P+SE+F KPLP RPSKA KS R QV+ASLKEK V
Sbjct: 5 SAVSMALPLTYASQKRV--PASEAFFKPLPARPSKAMS---ASKSSGRFQVKASLKEKLV 59
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALTASM AAG+G SPSLKNFLLSIVAGGVVL AI+GAVIGV+NFDPVK
Sbjct: 60 TGLTAGALTASMVIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVK 119
Query: 115 R 115
R
Sbjct: 120 R 120
>gi|388491786|gb|AFK33959.1| unknown [Medicago truncatula]
Length = 120
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 90/120 (75%), Gaps = 12/120 (10%)
Query: 3 SVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVT 62
SV+ A+PL SATQN+L PSSESF +PLP+ K +S+++ ++ ASLKEKAVT
Sbjct: 5 SVATALPLGSATQNKLKNPSSESFFRPLPITQPKRIT-----QSKSKFEINASLKEKAVT 59
Query: 63 GLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+TAA+LTASM AAGS LSPSL+NFLLSI AGG VL AI+GAVIGV+NFDPVKR
Sbjct: 60 AITAASLTASMVIPDVAHAAGSDLSPSLQNFLLSIFAGGAVLTAILGAVIGVSNFDPVKR 119
>gi|224068412|ref|XP_002326114.1| predicted protein [Populus trichocarpa]
gi|222833307|gb|EEE71784.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 12/121 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMA+PL+ A+Q R+ P+SE+F KPLP RPSKA KS R QV+ASLKEK V
Sbjct: 5 SAVSMALPLTYASQKRI--PASEAFFKPLPARPSKAMS---ASKSSGRFQVKASLKEKLV 59
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALTASM AAG+G SPSLKNFLLSIVAGGVVL AI+GAVIGV+NFDPVK
Sbjct: 60 TGLTAGALTASMVIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVK 119
Query: 115 R 115
R
Sbjct: 120 R 120
>gi|62910995|gb|AAY21210.1| ultraviolet-B-repressible protein [Gossypium hirsutum]
Length = 116
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 90/120 (75%), Gaps = 13/120 (10%)
Query: 6 MAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQA---SLKEKAVT 62
MA+PL+ TQNR+ PSSE+F KPLPV+P ++ + +P RLQV+A S KEKAVT
Sbjct: 1 MALPLAGTTQNRM--PSSEAFFKPLPVKPWRSMGAVKRPN--GRLQVKAASSSFKEKAVT 56
Query: 63 GLTAAALTASM------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
GLTAAALT SM A G++PSLKNFLLSI AGGVVL AIVGAVIGV+NFDPVKRT
Sbjct: 57 GLTAAALTTSMMIPEVAQAADGVTPSLKNFLLSIAAGGVVLVAIVGAVIGVSNFDPVKRT 116
>gi|118489056|gb|ABK96335.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 122
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 90/122 (73%), Gaps = 11/122 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMAMPL+ A+ R P+SE+F KPLPVRPSKA + QV+ASLKEK V
Sbjct: 5 SAVSMAMPLTHAS--RKAAPTSEAFFKPLPVRPSKA--IAAASRCNGGFQVKASLKEKVV 60
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALT SM AAG G+SPSL NFLLSIVAGGVVLAAI GAV+GV+NFDPV+
Sbjct: 61 TGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDPVR 120
Query: 115 RT 116
R+
Sbjct: 121 RS 122
>gi|255550141|ref|XP_002516121.1| conserved hypothetical protein [Ricinus communis]
gi|223544607|gb|EEF46123.1| conserved hypothetical protein [Ricinus communis]
Length = 115
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 87/116 (75%), Gaps = 6/116 (5%)
Query: 6 MAMPLSSATQNRLIQP-SSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVTGL 64
MAMPL+SATQ Q +SE L PLP RPSKA F K KSR RL+V ASLKEKAV GL
Sbjct: 1 MAMPLNSATQMSSKQILNSEFILHPLPTRPSKAV-FCAKSKSRPRLEVHASLKEKAVAGL 59
Query: 65 TAAALTASMA----AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
T AALTASM A + + PSLKNFLLSIVAGGVVL AIVGA++ VANFDPVKR+
Sbjct: 60 TIAALTASMVMPDVAEAAVFPSLKNFLLSIVAGGVVLGAIVGAIVAVANFDPVKRS 115
>gi|118489179|gb|ABK96396.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 122
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 89/122 (72%), Gaps = 11/122 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMAMPL+ A+ R P+SE+F KPLP RPSKA + R QV+ASLKEK V
Sbjct: 5 SAVSMAMPLTHAS--RKAAPTSEAFFKPLPARPSKA--IAAASRCNDRFQVKASLKEKVV 60
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALT SM AAG G+SPSL NFLLSIVAGGVVL AI GAV+GV+NFDPV+
Sbjct: 61 TGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLVAIAGAVVGVSNFDPVR 120
Query: 115 RT 116
R+
Sbjct: 121 RS 122
>gi|351726415|ref|NP_001236102.1| uncharacterized protein LOC100305487 [Glycine max]
gi|255625663|gb|ACU13176.1| unknown [Glycine max]
Length = 123
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 88/122 (72%), Gaps = 9/122 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
ASV MA+ L S T N +PSSE+F +PLP+R K F K S ++ Q+ ASLKEKAV
Sbjct: 4 ASVPMALSLGSVTNNN--KPSSEAFFRPLPLRQPKRTLFTTKAVSNSKPQINASLKEKAV 61
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
GLTAA++TASM AAG SPSLKNFLLSI AGGVVLAAI GAVIGV+NFDPVK
Sbjct: 62 AGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVK 121
Query: 115 RT 116
RT
Sbjct: 122 RT 123
>gi|45356861|gb|AAS58469.1| ultraviolet-B-repressible protein [Gossypium hirsutum]
Length = 123
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 14/124 (11%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQA---SLKE 58
++VSMA+PL+ ATQNR+ P+SE+F KPLP +PS A + S RLQV+A S K+
Sbjct: 5 SAVSMALPLTRATQNRV--PASEAFFKPLPRKPSGA---IPTTTSNGRLQVKAAASSPKD 59
Query: 59 KAVTGLTAAALTASMA------AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDP 112
KAVTGLTAAA+TASM A G+SPSLKNFLLSIVAGGVVL AIVGAVIGV+NFDP
Sbjct: 60 KAVTGLTAAAITASMVIPEVAQAADGVSPSLKNFLLSIVAGGVVLVAIVGAVIGVSNFDP 119
Query: 113 VKRT 116
VK T
Sbjct: 120 VKGT 123
>gi|356514719|ref|XP_003526051.1| PREDICTED: uncharacterized protein LOC100780841 [Glycine max]
Length = 123
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 85/122 (69%), Gaps = 9/122 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
ASV MA LSS N +PSSE+F +PLP+R K F K S ++ Q+ ASLKEKAV
Sbjct: 4 ASVPMAFSLSSVINNN--KPSSEAFFRPLPLRQPKRTLFTTKAVSNSKAQINASLKEKAV 61
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
GLTAA++TASM AAG SPSLKNFLLSI AGG VL AI GAVIGV+NFDPVK
Sbjct: 62 AGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVK 121
Query: 115 RT 116
RT
Sbjct: 122 RT 123
>gi|351722037|ref|NP_001236974.1| uncharacterized protein LOC100305808 [Glycine max]
gi|255626661|gb|ACU13675.1| unknown [Glycine max]
Length = 124
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 91/120 (75%), Gaps = 5/120 (4%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSES-FLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
++VS+AMP++ A+Q R++ PSS++ FLKPLP+R + R QV+AS+KEK
Sbjct: 5 SAVSLAMPVTYASQKRVLVPSSDALFLKPLPLRSYSSKAMAASKVPNGRFQVRASMKEKV 64
Query: 61 VTGLTAAALTASM----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
VTGLTAAA TASM A + +SPSLKNFLLSI AGGVV+AAI+GAV+GV+NFDPVKR+
Sbjct: 65 VTGLTAAAFTASMMAPDVAEAAVSPSLKNFLLSIAAGGVVVAAIIGAVVGVSNFDPVKRS 124
>gi|255637994|gb|ACU19313.1| unknown [Glycine max]
Length = 123
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 85/122 (69%), Gaps = 9/122 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
ASV MA LSS N +PSSE+F +PLP+R K F K + ++ Q+ ASLKEKAV
Sbjct: 4 ASVPMAFSLSSVINNN--KPSSEAFFRPLPLRQPKRTLFTTKAVANSKAQINASLKEKAV 61
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
GLTAA++TASM AAG SPSLKNFLLSI AGG VL AI GAVIGV+NFDPVK
Sbjct: 62 AGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVK 121
Query: 115 RT 116
RT
Sbjct: 122 RT 123
>gi|357437293|ref|XP_003588922.1| Ultraviolet-B-repressible protein [Medicago truncatula]
gi|355477970|gb|AES59173.1| Ultraviolet-B-repressible protein [Medicago truncatula]
gi|388515311|gb|AFK45717.1| unknown [Medicago truncatula]
Length = 125
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 9/123 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARL-QVQASLKEKA 60
ASVSM++PL+ AT L SS FLKPLP P + K S++ + +QASLK+K
Sbjct: 4 ASVSMSLPLTQATHKNLHNSSSTPFLKPLPF-PQAKKTLVNKSTSKSNVVGIQASLKDKT 62
Query: 61 VTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPV 113
V GLTA ALTASM AAG+ SPSLKNFLLSI AGGVVL AI+GAV+GV+NFDPV
Sbjct: 63 VKGLTAFALTASMVLPDVAHAAGNDFSPSLKNFLLSIAAGGVVLTAILGAVVGVSNFDPV 122
Query: 114 KRT 116
KRT
Sbjct: 123 KRT 125
>gi|118485638|gb|ABK94669.1| unknown [Populus trichocarpa]
Length = 121
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 12/121 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMA+PL+ A+Q R+ P+SE+F KPLP RPSKA KS R QV+ASLKEK V
Sbjct: 5 SAVSMALPLTYASQKRV--PASEAFFKPLPARPSKAMS---ASKSSGRFQVKASLKEKLV 59
Query: 62 TGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
TGLTA ALTASM AAG+G SPSLKNFLLSIVAGGVVL AI+GAVIGV+NFDPVK
Sbjct: 60 TGLTAGALTASMVIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVK 119
Query: 115 R 115
R
Sbjct: 120 R 120
>gi|33520421|gb|AAQ21122.1| ultraviolet-B-repressible protein [Trifolium pratense]
Length = 118
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 91/119 (76%), Gaps = 13/119 (10%)
Query: 4 VSMAMPLSSATQNRLIQPSSESFLK-PLPVRPSKAARFLGKPKSRARLQVQASLKEKAVT 62
+SM++P++ A+ ++ P S++FLK PL ++PSK+ +R + QV+ASLKEK VT
Sbjct: 7 ISMSVPVTCASSKKIEAPISQAFLKAPLTLKPSKS-------NTRFQFQVKASLKEKVVT 59
Query: 63 GLTAAALTASM-----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
GLTAAALTASM A + +SPSLKNFLLSIV+GGVV+AAI+GAVI V+NFDPVKRT
Sbjct: 60 GLTAAALTASMIVPDVAEAATVSPSLKNFLLSIVSGGVVVAAILGAVIAVSNFDPVKRT 118
>gi|217071532|gb|ACJ84126.1| unknown [Medicago truncatula]
gi|388517455|gb|AFK46789.1| unknown [Medicago truncatula]
Length = 117
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 93/120 (77%), Gaps = 14/120 (11%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLK-PLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
+++SMA+PL+ A++ +L P+S++FLK PL ++PSK+ + AR V+ASLKEK
Sbjct: 5 STISMAVPLTCASK-KLEAPTSQAFLKAPLTLKPSKSV-------AAARFVVKASLKEKI 56
Query: 61 VTGLTAAALTASM-----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
VTGLTAAALTASM A + +SPSLKNFLLSIV+GGVV+ AI+GAVIGV+NFDPVKR
Sbjct: 57 VTGLTAAALTASMISPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKR 116
>gi|413968468|gb|AFW90571.1| ultraviolet-B-repressible protein [Solanum tuberosum]
Length = 119
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 82/119 (68%), Gaps = 14/119 (11%)
Query: 4 VSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQAS-LKEKAVT 62
VSMA+PL+ +Q + QP E F KPLP+RPSK S+ + ++AS +KEKAV
Sbjct: 7 VSMAIPLTCKSQKK--QPIVEGFFKPLPIRPSKQIA-----TSKKFVVIKASSIKEKAVV 59
Query: 63 GLTAAALTASMA------AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
GLT LTASM A LSPSLKNFLLSIV+GGVVL AI+GA+IGV+NFDPVKR
Sbjct: 60 GLTTGVLTASMVVPDVAQAAESLSPSLKNFLLSIVSGGVVLGAIIGAIIGVSNFDPVKR 118
>gi|449488079|ref|XP_004157934.1| PREDICTED: uncharacterized protein LOC101226875 [Cucumis sativus]
Length = 122
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSR----ARLQVQASLK 57
+++SMAMP+++A Q R + +E+F KPLP+RPS KP A+ QV+ASLK
Sbjct: 5 SAISMAMPITNAAQKRARR--AEAFAKPLPLRPS------NKPSGSSSSSAKFQVRASLK 56
Query: 58 EKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANF 110
EKAV GL A ALTASM AAGSG+SPSLKNFLLSI AGGVV+ AI+GAVIGVANF
Sbjct: 57 EKAVAGLAATALTASMVLPEVAEAAGSGVSPSLKNFLLSIAAGGVVVTAILGAVIGVANF 116
Query: 111 DPVKRT 116
DPVKRT
Sbjct: 117 DPVKRT 122
>gi|449452548|ref|XP_004144021.1| PREDICTED: uncharacterized protein LOC101206220 [Cucumis sativus]
Length = 123
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 12/123 (9%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRAR-LQVQASLKEKA 60
+++SMA+P + AT+ L S+++F PLP S+ P S R L V++S KEKA
Sbjct: 5 SALSMALPFTHATRKPL---SNDAFFNPLPSFKSRKP-IATAPISNGRILAVRSSFKEKA 60
Query: 61 VTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPV 113
V G++AAALTASM AAGSG+SPSLKNFLLSI AGGVV+ AI+GAVIGVANFDPV
Sbjct: 61 VAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAGGVVVVAILGAVIGVANFDPV 120
Query: 114 KRT 116
KR+
Sbjct: 121 KRS 123
>gi|169840553|gb|ACA96917.1| chloroplast photosystem II subunit X [Oenothera elata subsp.
hookeri]
Length = 122
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 84/119 (70%), Gaps = 19/119 (15%)
Query: 8 MPLSSATQNRLIQPSSESFLKPLPVRPSK---AARFLGKPKSRARLQVQASLKEKAVTGL 64
M L+ T++ L PSS SF P+ VRPSK AAR A+LQV+ASL EKAVTGL
Sbjct: 12 MQLAPFTKSNL--PSSASFFSPMTVRPSKPISAAR-------GAKLQVRASLTEKAVTGL 62
Query: 65 TAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TAAALTASM AA SGL+PSL NFLLSI +GGVVLA I+G V+ V++FDPVKRT
Sbjct: 63 TAAALTASMVMPEAAEAAVSGLTPSLNNFLLSIGSGGVVLAGIIGVVLAVSSFDPVKRT 121
>gi|169840559|gb|ACA96920.1| chloroplast photosystem II subunit X [Oenothera grandiflora]
Length = 122
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 84/119 (70%), Gaps = 19/119 (15%)
Query: 8 MPLSSATQNRLIQPSSESFLKPLPVRPSK---AARFLGKPKSRARLQVQASLKEKAVTGL 64
M L+ T++ L PSS SF P+ VRPSK AAR A++QV+ASL EKAVTGL
Sbjct: 12 MQLAPYTKSNL--PSSASFFSPMTVRPSKPISAAR-------GAKIQVRASLTEKAVTGL 62
Query: 65 TAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TAAALTASM AA SGL+PSL NFLLSI +GGVVLA I+G V+ V++FDPVKRT
Sbjct: 63 TAAALTASMVMPEAAEAAVSGLTPSLNNFLLSIGSGGVVLAGIIGVVLAVSSFDPVKRT 121
>gi|169840557|gb|ACA96919.1| chloroplast photosystem II subunit X [Oenothera grandiflora]
Length = 120
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 84/119 (70%), Gaps = 19/119 (15%)
Query: 8 MPLSSATQNRLIQPSSESFLKPLPVRPSK---AARFLGKPKSRARLQVQASLKEKAVTGL 64
M L+ T++ L PSS SF P+ VRPSK AAR A++QV+ASL EKAVTGL
Sbjct: 10 MQLAPYTKSNL--PSSASFFSPMTVRPSKPISAAR-------GAKIQVRASLTEKAVTGL 60
Query: 65 TAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TAAALTASM AA SGL+PSL NFLLSI +GGVVLA I+G V+ V++FDPVKRT
Sbjct: 61 TAAALTASMVMPEAAEAAVSGLTPSLNNFLLSIGSGGVVLAGIIGVVLAVSSFDPVKRT 119
>gi|169840555|gb|ACA96918.1| chloroplast photosystem II subunit X [Oenothera elata subsp.
hookeri]
Length = 122
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 84/119 (70%), Gaps = 19/119 (15%)
Query: 8 MPLSSATQNRLIQPSSESFLKPLPVRPSK---AARFLGKPKSRARLQVQASLKEKAVTGL 64
M L+ T++ L PSS SF +P+ VRPSK AAR A++Q +ASL EKAVTGL
Sbjct: 12 MQLAPFTKSNL--PSSASFFRPMTVRPSKPISAAR-------GAKIQARASLTEKAVTGL 62
Query: 65 TAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TAAALTASM AA SGL+PSL NFLLSI +GGVVLA I+G V+ V++FDPVKRT
Sbjct: 63 TAAALTASMVMPEAAEAAVSGLTPSLNNFLLSIGSGGVVLAGIIGVVLAVSSFDPVKRT 121
>gi|388492586|gb|AFK34359.1| unknown [Lotus japonicus]
gi|388505376|gb|AFK40754.1| unknown [Lotus japonicus]
Length = 119
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/118 (61%), Positives = 92/118 (77%), Gaps = 8/118 (6%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSMAMPL+ A+Q R++ P+SE+F KP+ +R S+AA KS R QV+AS+KEK V
Sbjct: 5 SAVSMAMPLTHASQQRVV-PTSEAFFKPMHLRSSRAAA---ASKSSGRFQVRASMKEKVV 60
Query: 62 TGLTAAALTASM----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
TGLTAAA+TASM A + +SPSLKNFLLSI AGGVVL I+GAV+GV+NFDPVKR
Sbjct: 61 TGLTAAAMTASMMVPDVAEAAVSPSLKNFLLSIAAGGVVLVVIIGAVVGVSNFDPVKR 118
>gi|18476498|gb|AAL50314.1| ultraviolet-B-repressible protein [Pisum sativum]
Length = 86
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 62/76 (81%), Gaps = 5/76 (6%)
Query: 45 KSRARLQVQASLKEKAVTGLTAAALTASM-----AAGSGLSPSLKNFLLSIVAGGVVLAA 99
KS R QV+ASLKEK VTGLTAAALTA M A + +SPSLKNFLLSIV+GGVV+ A
Sbjct: 8 KSNGRFQVKASLKEKVVTGLTAAALTAQMVIPDVAEAATVSPSLKNFLLSIVSGGVVVTA 67
Query: 100 IVGAVIGVANFDPVKR 115
I+GAVIGV+NFDPVKR
Sbjct: 68 ILGAVIGVSNFDPVKR 83
>gi|351734474|ref|NP_001236556.1| uncharacterized protein LOC100306291 [Glycine max]
gi|255628121|gb|ACU14405.1| unknown [Glycine max]
Length = 119
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 93/119 (78%), Gaps = 8/119 (6%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSM MP++ A+Q R++ PSS++F KPLP+R SKA + K R QV+AS+KEK V
Sbjct: 5 SAVSMVMPVTYASQKRVV-PSSDAFFKPLPLRSSKA---VTASKLNGRFQVRASMKEKVV 60
Query: 62 TGLTAAALTASM----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TGLTAAALTASM A + ++PSLKNFLLSI AGGVV+ AI+GAVIGV+NFDPVKR+
Sbjct: 61 TGLTAAALTASMMVPDVAEAAVTPSLKNFLLSIAAGGVVVVAIIGAVIGVSNFDPVKRS 119
>gi|225729183|gb|ACO24551.1| chloroplast photosystem II subunit X [Vigna radiata]
Length = 120
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 9/120 (7%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
+++SMAMP++ A+ +++ P+S++F KPLP+R SKA L + R QV+AS+KEK V
Sbjct: 5 SALSMAMPVTCASHKKVV-PTSDAFFKPLPLRSSKA---LTASNTNGRFQVRASMKEKVV 60
Query: 62 TGLTAAALTASM-----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TGLTAAALTASM A + +SPSLKNFLLSI AGGVV+ AI+G VIGVANFDPVKR+
Sbjct: 61 TGLTAAALTASMMAPDVAEAASVSPSLKNFLLSIAAGGVVVVAIIGVVIGVANFDPVKRS 120
>gi|297835876|ref|XP_002885820.1| hypothetical protein ARALYDRAFT_480223 [Arabidopsis lyrata subsp.
lyrata]
gi|297331660|gb|EFH62079.1| hypothetical protein ARALYDRAFT_480223 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 11/107 (10%)
Query: 18 LIQPSSESFLKPLPVRPSKAARFLGKPKSRA-RLQVQASLKEKAVTGLTAAALTASM--- 73
L Q S FLKPLP++PSKA G RA RLQV+A +KA+TG++AAALTASM
Sbjct: 13 LCQTRSSPFLKPLPLKPSKALVATG---GRAQRLQVKALKMDKALTGISAAALTASMVIP 69
Query: 74 ----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AAGSG+SPSLKNFLLSI +GG+VL I+G V+GV+NFDPVKRT
Sbjct: 70 EIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKRT 116
>gi|18396349|ref|NP_565335.1| photosystem II subunit X [Arabidopsis thaliana]
gi|13926201|gb|AAK49579.1|AF370573_1 Unknown protein [Arabidopsis thaliana]
gi|4584357|gb|AAD25151.1| expressed protein [Arabidopsis thaliana]
gi|110740880|dbj|BAE98536.1| putative PSII-X protein [Arabidopsis thaliana]
gi|330250917|gb|AEC06011.1| photosystem II subunit X [Arabidopsis thaliana]
Length = 116
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 11/107 (10%)
Query: 18 LIQPSSESFLKPLPVRPSKAARFLGKPKSRA-RLQVQASLKEKAVTGLTAAALTASM--- 73
L Q S FLKPLP++PSKA G RA RLQV+A +KA+TG++AAALTASM
Sbjct: 13 LNQTRSSPFLKPLPLKPSKALVATG---GRAQRLQVKALKMDKALTGISAAALTASMVIP 69
Query: 74 ----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AAGSG+SPSLKNFLLSI +GG+VL I+G V+GV+NFDPVKRT
Sbjct: 70 EIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKRT 116
>gi|356530417|ref|XP_003533778.1| PREDICTED: uncharacterized protein LOC100792794 [Glycine max]
Length = 119
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 8/119 (6%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAV 61
++VSM MP++ A+Q R++ PSS++F KPL +R SK + S R QV+ S+KEK V
Sbjct: 5 SAVSMVMPVTYASQKRVV-PSSDAFFKPLTLRSSKV---VAASNSNGRFQVRTSMKEKVV 60
Query: 62 TGLTAAALTASM----AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
TGLTAAALTASM A + +SPSLKNFLLSI AGGVV+ AI+GAVIGV+NFDPVKR+
Sbjct: 61 TGLTAAALTASMMVPDVAEAAVSPSLKNFLLSIAAGGVVVVAIIGAVIGVSNFDPVKRS 119
>gi|225444786|ref|XP_002279935.1| PREDICTED: uncharacterized protein LOC100243957 [Vitis vinifera]
Length = 123
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 93/121 (76%), Gaps = 10/121 (8%)
Query: 3 SVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVT 62
+VSMAMP++SATQ RL SE+F +PLPVRPSK+ KS + +V+ASLKEKAVT
Sbjct: 6 AVSMAMPMTSATQTRL--QGSEAFFRPLPVRPSKSMAAASS-KSSGKFEVRASLKEKAVT 62
Query: 63 GLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
GLTAAAL ASM AA SGLSPSLKNFLLSI AGGVVL IVGAVIGVANFDPVKR
Sbjct: 63 GLTAAALAASMVIPEVAEAADSGLSPSLKNFLLSIAAGGVVLVVIVGAVIGVANFDPVKR 122
Query: 116 T 116
+
Sbjct: 123 S 123
>gi|116786232|gb|ABK24033.1| unknown [Picea sitchensis]
Length = 129
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 18/128 (14%)
Query: 3 SVSMAMPLSSATQ--NRLIQPSSESFLKPLPVRPSKAARFLGKPK---SRARLQVQASL- 56
++S+A+P+++A+ R + + L P+K L PK +R+R+ + AS
Sbjct: 6 AISLALPMATASSVSQRDALKAKHAHGSSLFTTPNK----LYSPKLASNRSRVVMHASQG 61
Query: 57 -KEKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVA 108
KE+++ GLT+ AL A+M AAGSG+SPSLKNFLLSI AGGVV AI GAVIGV+
Sbjct: 62 KKEQSLAGLTSLALAAAMVIPEIAEAAGSGVSPSLKNFLLSIAAGGVVATAIAGAVIGVS 121
Query: 109 NFDPVKRT 116
NFDPVKR
Sbjct: 122 NFDPVKRN 129
>gi|227206108|dbj|BAH57109.1| AT2G06520 [Arabidopsis thaliana]
Length = 67
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 55/66 (83%), Gaps = 7/66 (10%)
Query: 58 EKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANF 110
+KA+TG++AAALTASM AAGSG+SPSLKNFLLSI +GG+VL I+G V+GV+NF
Sbjct: 2 DKALTGISAAALTASMVIPEIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNF 61
Query: 111 DPVKRT 116
DPVKRT
Sbjct: 62 DPVKRT 67
>gi|383162891|gb|AFG64142.1| Pinus taeda anonymous locus 0_2179_01 genomic sequence
gi|383162892|gb|AFG64143.1| Pinus taeda anonymous locus 0_2179_01 genomic sequence
gi|383162893|gb|AFG64144.1| Pinus taeda anonymous locus 0_2179_01 genomic sequence
gi|383162894|gb|AFG64145.1| Pinus taeda anonymous locus 0_2179_01 genomic sequence
gi|383162895|gb|AFG64146.1| Pinus taeda anonymous locus 0_2179_01 genomic sequence
Length = 61
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 7/61 (11%)
Query: 63 GLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
GLT+ L ++M AAGSG+SPSLKNFLLSI AGGVV I GAV+GV+NFDPVKR
Sbjct: 1 GLTSLVLASTMVIPEIAEAAGSGVSPSLKNFLLSIAAGGVVATLIAGAVVGVSNFDPVKR 60
Query: 116 T 116
Sbjct: 61 N 61
>gi|357121518|ref|XP_003562466.1| PREDICTED: uncharacterized protein LOC100834468 [Brachypodium
distachyon]
Length = 124
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AA GLSPSLKNFLLSIV+GGVV A I+GAV+ V+NFDPVKRT
Sbjct: 82 AASPGLSPSLKNFLLSIVSGGVVFAGILGAVVAVSNFDPVKRT 124
>gi|326529069|dbj|BAK00928.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 117
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AA GLSPSLKNFLLSIV+GGVV A I GAV+ V+NFDPVKRT
Sbjct: 75 AASPGLSPSLKNFLLSIVSGGVVFAGIAGAVVAVSNFDPVKRT 117
>gi|116778730|gb|ABK20971.1| unknown [Picea sitchensis]
gi|116780900|gb|ABK21870.1| unknown [Picea sitchensis]
gi|116790136|gb|ABK25513.1| unknown [Picea sitchensis]
gi|116790175|gb|ABK25528.1| unknown [Picea sitchensis]
Length = 135
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 14 TQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQ--ASLKEKAVTGLTAAALTA 71
T NRL Q S P +PS +++ +G KSR + + + ++ GLTA AL A
Sbjct: 27 TSNRLKQVQGFSLYSP--NKPS-SSKLVGNGKSRVVMMGKDISEREQSNYAGLTAVALAA 83
Query: 72 SM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
+M AA G+S SLKNFLLSI +G VVL AI AV+GV++FDPVKR+
Sbjct: 84 AMVIPEMAEAAVPGVSASLKNFLLSIASGSVVLGAIGVAVVGVSSFDPVKRS 135
>gi|168053215|ref|XP_001779033.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669595|gb|EDQ56179.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 126
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 46 SRARLQVQASLKEKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLA 98
+R+R+ + A+ ++K V GLT+ AL A+ AA G+SPSLKN LLS+VAGG VL
Sbjct: 49 NRSRVVMSAAPQDKNVAGLTSLALLAAAVVPEIAEAAQPGISPSLKNLLLSVVAGGTVLT 108
Query: 99 AIVGAVIGVANFDPVKR 115
I AV GV+ FDPVKR
Sbjct: 109 VIGVAVAGVSTFDPVKR 125
>gi|224284826|gb|ACN40143.1| unknown [Picea sitchensis]
Length = 76
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 7/67 (10%)
Query: 57 KEKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVAN 109
++ GLTA AL A+M AA G+S SLKNFLLSI +G VVL AI AV+GV++
Sbjct: 10 EQSNYAGLTAVALAAAMVIPEMAEAAVPGVSASLKNFLLSIASGSVVLGAIGVAVVGVSS 69
Query: 110 FDPVKRT 116
FDPVKR+
Sbjct: 70 FDPVKRS 76
>gi|168034164|ref|XP_001769583.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679125|gb|EDQ65576.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
AA G+SPSLKN LLS+VAGG VL I AV GV+ FDPVKR
Sbjct: 196 AAQPGVSPSLKNLLLSVVAGGTVLTVIGVAVAGVSTFDPVKR 237
>gi|145342485|ref|XP_001416212.1| psbX, PSII-X, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
gi|144576437|gb|ABO94505.1| psbX, PSII-X, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
Length = 70
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 68 ALTASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++T+ + A + ++PSLKN LLS+VAGGVVL AI AVIGV++FD V R
Sbjct: 22 SMTSPLLAEASVTPSLKNTLLSVVAGGVVLGAIAAAVIGVSSFDKVSR 69
>gi|255081252|ref|XP_002507848.1| photosystem II reaction center X [Micromonas sp. RCC299]
gi|226523124|gb|ACO69106.1| photosystem II reaction center X [Micromonas sp. RCC299]
Length = 111
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 73 MAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+ A + ++PSLKN LLS+VAGG+VL AI AVIGV+ FD V R
Sbjct: 68 LVAEAAVTPSLKNTLLSVVAGGLVLGAIAAAVIGVSTFDKVNR 110
>gi|384252669|gb|EIE26145.1| hypothetical protein COCSUDRAFT_52698 [Coccomyxa subellipsoidea
C-169]
Length = 116
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 67 AALTASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
AAL++ +AA + ++PSLKN + S++AGGVVL IV V V+ FDPV R
Sbjct: 67 AALSSPLAAQAAVTPSLKNLINSVIAGGVVLGVIVAGVTAVSGFDPVTR 115
>gi|303285810|ref|XP_003062195.1| photosystem II PsbX protein, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226456606|gb|EEH53907.1| photosystem II PsbX protein, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 113
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 73 MAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+ A + ++PSLKN LLS+VAGG+VLAAI AV+GV+ FD V R
Sbjct: 70 LVAEAAITPSLKNTLLSVVAGGIVLAAIGVAVVGVSTFDKVSR 112
>gi|297725935|ref|NP_001175331.1| Os07g0673550 [Oryza sativa Japonica Group]
gi|22831147|dbj|BAC16008.1| putative ultraviolet-B-repressible protein [Oryza sativa Japonica
Group]
gi|33147042|dbj|BAC80131.1| putative ultraviolet-B-repressible protein [Oryza sativa Japonica
Group]
gi|255678058|dbj|BAH94059.1| Os07g0673550 [Oryza sativa Japonica Group]
Length = 117
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AA L+PSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 75 AAQGSLTPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKRT 117
>gi|226499802|ref|NP_001148021.1| ultraviolet-B-repressible protein [Zea mays]
gi|195615206|gb|ACG29433.1| ultraviolet-B-repressible protein [Zea mays]
gi|414876175|tpg|DAA53306.1| TPA: ultraviolet-B-repressible protein [Zea mays]
Length = 120
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 75 AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A G+SPSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKR
Sbjct: 79 AAPGISPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKR 119
>gi|125559571|gb|EAZ05107.1| hypothetical protein OsI_27299 [Oryza sativa Indica Group]
Length = 117
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AA L+PSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 75 AAQGSLTPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKRT 117
>gi|168010797|ref|XP_001758090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690546|gb|EDQ76912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 125
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 57 KEKAVTGLTAAALTASM-------AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVAN 109
+ V LT AL A+ AA G+S SL+N LLS++AGGVV++ I AV GV+
Sbjct: 59 ENHNVMSLTGLALVAAAVVPEIAEAAQPGVSDSLRNLLLSVLAGGVVISVIGVAVAGVST 118
Query: 110 FDPVKR 115
FDPV R
Sbjct: 119 FDPVSR 124
>gi|302844093|ref|XP_002953587.1| hypothetical protein VOLCADRAFT_106026 [Volvox carteri f.
nagariensis]
gi|300260996|gb|EFJ45211.1| hypothetical protein VOLCADRAFT_106026 [Volvox carteri f.
nagariensis]
Length = 1075
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++PSL+NFL S+VAGGVVL I A+ V+ FD VKR
Sbjct: 1038 VTPSLRNFLYSLVAGGVVLGGIAIAITAVSKFDSVKR 1074
>gi|222637671|gb|EEE67803.1| hypothetical protein OsJ_25545 [Oryza sativa Japonica Group]
Length = 76
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
AA L+PSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 34 AAQGSLTPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKRT 76
>gi|226503585|ref|NP_001148253.1| ultraviolet-B-repressible protein [Zea mays]
gi|195615308|gb|ACG29484.1| ultraviolet-B-repressible protein [Zea mays]
gi|195616968|gb|ACG30314.1| ultraviolet-B-repressible protein [Zea mays]
gi|195617222|gb|ACG30441.1| ultraviolet-B-repressible protein [Zea mays]
Length = 120
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 75 AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A G+SPSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKR
Sbjct: 79 AAPGISPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKR 119
>gi|242051959|ref|XP_002455125.1| hypothetical protein SORBIDRAFT_03g004730 [Sorghum bicolor]
gi|241927100|gb|EES00245.1| hypothetical protein SORBIDRAFT_03g004730 [Sorghum bicolor]
Length = 119
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 75 AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A G+SPSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKR
Sbjct: 78 AAPGISPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKR 118
>gi|307110878|gb|EFN59113.1| expressed protein [Chlorella variabilis]
Length = 102
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 80 SPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+PSL N + S+VAGG VLAAI GA+ V+NFD ++R
Sbjct: 67 TPSLNNLIGSLVAGGAVLAAIAGAISAVSNFDDIRR 102
>gi|413947475|gb|AFW80124.1| ultraviolet-B-repressible protein [Zea mays]
Length = 122
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 75 AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A G+SPSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPV+R
Sbjct: 81 AAPGISPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVRR 121
>gi|195638640|gb|ACG38788.1| ultraviolet-B-repressible protein [Zea mays]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 47 RARLQVQASLKEKAVTGLTAAALTASMAAGS--GLSPSLKNFLLSIVAGGVVLAAIVGAV 104
RA Q Q S KE A AAAL A + G+SPSLKNFLLSIV+GGVVL AIVGAV
Sbjct: 51 RASAQKQHSAKEWAAAAAVAAALVLPEVAEAAPGISPSLKNFLLSIVSGGVVLVAIVGAV 110
Query: 105 IGVANFDPVKR 115
+ V+NFDPV+R
Sbjct: 111 VAVSNFDPVRR 121
>gi|226508988|ref|NP_001148549.1| ultraviolet-B-repressible protein [Zea mays]
gi|195620336|gb|ACG31998.1| ultraviolet-B-repressible protein [Zea mays]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 47 RARLQVQASLKEKAVTGLTAAALTASMAAGS--GLSPSLKNFLLSIVAGGVVLAAIVGAV 104
RA Q Q S KE A AAAL A + G+SPSLKNFLLSIV+GGVVL AIVGAV
Sbjct: 51 RASAQKQHSAKEWAAAAAVAAALVLPEVAEAAPGISPSLKNFLLSIVSGGVVLVAIVGAV 110
Query: 105 IGVANFDPVKR 115
+ V+NFDPV+R
Sbjct: 111 VAVSNFDPVRR 121
>gi|242051266|ref|XP_002463377.1| hypothetical protein SORBIDRAFT_02g042680 [Sorghum bicolor]
gi|241926754|gb|EER99898.1| hypothetical protein SORBIDRAFT_02g042680 [Sorghum bicolor]
Length = 114
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 75 AGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A L+PSLKNFLLSIV+GGVVL AIVGAV+ V+NFDPVKR
Sbjct: 73 AAQSLTPSLKNFLLSIVSGGVVLVAIVGAVVAVSNFDPVKR 113
>gi|115452961|ref|NP_001050081.1| Os03g0343900 [Oryza sativa Japonica Group]
gi|108708087|gb|ABF95882.1| Photosystem II reaction centre X protein containing protein,
expressed [Oryza sativa Japonica Group]
gi|113548552|dbj|BAF11995.1| Os03g0343900 [Oryza sativa Japonica Group]
gi|125543826|gb|EAY89965.1| hypothetical protein OsI_11525 [Oryza sativa Indica Group]
gi|215740724|dbj|BAG97380.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 128
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
LSPSLKNFLLSI +GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 91 LSPSLKNFLLSIASGGVVLVAIVGAVVAVSNFDPVKRT 128
>gi|125586217|gb|EAZ26881.1| hypothetical protein OsJ_10805 [Oryza sativa Japonica Group]
Length = 113
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
LSPSLKNFLLSI +GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 76 LSPSLKNFLLSIASGGVVLVAIVGAVVAVSNFDPVKRT 113
>gi|108708088|gb|ABF95883.1| Photosystem II reaction centre X protein containing protein,
expressed [Oryza sativa Japonica Group]
Length = 90
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
LSPSLKNFLLSI +GGVVL AIVGAV+ V+NFDPVKRT
Sbjct: 53 LSPSLKNFLLSIASGGVVLVAIVGAVVAVSNFDPVKRT 90
>gi|86608294|ref|YP_477056.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123503223|sp|Q2JN82.1|PSBX_SYNJB RecName: Full=Photosystem II reaction center X protein
gi|86556836|gb|ABD01793.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 38
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++PSL NFL S+VAG VVL A+ GA+I V+ D V+R
Sbjct: 1 MTPSLANFLWSLVAGAVVLGALFGAIIFVSQRDKVRR 37
>gi|189095399|ref|YP_001936412.1| photosystem II protein X [Heterosigma akashiwo]
gi|157694742|gb|ABV66018.1| photosystem II protein X [Heterosigma akashiwo]
gi|157777973|gb|ABV70159.1| photosystem II protein X [Heterosigma akashiwo]
Length = 39
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKRT 116
++ SL NF LS+VAGG+V+ AI AVI V+ DP+KR+
Sbjct: 1 MTASLSNFFLSLVAGGLVVTAIALAVIFVSTADPLKRS 38
>gi|226509852|ref|NP_001148321.1| ultraviolet-B-repressible protein [Zea mays]
gi|195617570|gb|ACG30615.1| ultraviolet-B-repressible protein [Zea mays]
Length = 122
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 71 ASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A A GL+PSLKNFLLSIV+GGVVL IVGAV+ V+NFDPVKR
Sbjct: 77 AEAAQSGGLTPSLKNFLLSIVSGGVVLVGIVGAVVAVSNFDPVKR 121
>gi|195617752|gb|ACG30706.1| ultraviolet-B-repressible protein [Zea mays]
gi|414888080|tpg|DAA64094.1| TPA: ultraviolet-B-repressible protein [Zea mays]
Length = 122
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 71 ASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
A A GL+PSLKNFLLSIV+GGVVL IVGAV+ V+NFDPVKR
Sbjct: 77 AEAAQSGGLTPSLKNFLLSIVSGGVVLVGIVGAVVAVSNFDPVKR 121
>gi|86607216|ref|YP_475979.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-3-3Ab]
gi|123504998|sp|Q2JRN5.1|PSBX2_SYNJA RecName: Full=Photosystem II reaction center X protein 2
gi|86555758|gb|ABD00716.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-3-3Ab]
Length = 38
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++PSL NFL S+V G VVL + GA++ V+ D V+R
Sbjct: 1 MTPSLANFLWSLVYGAVVLGLLFGAIVFVSQRDRVRR 37
>gi|308800582|ref|XP_003075072.1| Orf13 Orphan hypothetical protein (IC) [Ostreococcus tauri]
gi|116061626|emb|CAL52344.1| Orf13 Orphan hypothetical protein (IC) [Ostreococcus tauri]
Length = 112
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 69 LTASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+++ +AA + ++PSL+N LLS+VAGGVVLAAI AVIGV++FD V R
Sbjct: 65 ISSPLAAEASVTPSLRNTLLSVVAGGVVLAAIAVAVIGVSSFDKVSR 111
>gi|167644937|ref|YP_001682600.1| hypothetical protein Caul_0972 [Caulobacter sp. K31]
gi|167347367|gb|ABZ70102.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 443
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLG-KPKSRARLQVQASLKEKA 60
A++S +P + +NRL F K VR F+G PK+ AR+ V ++ ++A
Sbjct: 321 ATLSAYLPPDRSWRNRLFDTVERGFAKAFFVR-----HFMGGDPKAAARMGVHVTMSDRA 375
Query: 61 VTGLTAAALTASMAA 75
+ L AA +T+ MAA
Sbjct: 376 LFVLVAAIITSRMAA 390
>gi|86607177|ref|YP_475940.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-3-3Ab]
gi|123505043|sp|Q2JRR9.1|PSBX1_SYNJA RecName: Full=Photosystem II reaction center X protein 1
gi|86555719|gb|ABD00677.1| photosystem II reaction center protein PsbX [Synechococcus sp.
JA-3-3Ab]
Length = 38
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++PSL NFL S++ G VVL + GA++ V+ D V+R
Sbjct: 1 MTPSLANFLWSLLYGAVVLGLLFGAIVFVSQRDRVRR 37
>gi|159487387|ref|XP_001701704.1| 4.1 kDa photosystem II subunit [Chlamydomonas reinhardtii]
gi|158280923|gb|EDP06679.1| 4.1 kDa photosystem II subunit [Chlamydomonas reinhardtii]
Length = 101
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 77 SGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
+ ++PSLKNFL S++AG VL I A+ V+ FD R
Sbjct: 63 AAVTPSLKNFLGSLIAGATVLGGIALAITAVSKFDKTIR 101
>gi|168059259|ref|XP_001781621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666935|gb|EDQ53577.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 140
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 74 AAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
AA G+SPSLKN LLS+VAGGVV+ I AV GV+ FDPVKR
Sbjct: 98 AAQPGVSPSLKNLLLSVVAGGVVVTVIGVAVAGVSTFDPVKR 139
>gi|403225178|gb|AFR24790.1| photosystem II protein X [uncultured Pelagomonas]
Length = 38
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++PSL +F+ S+ AG VLA I GA+ V+N D V R
Sbjct: 1 MTPSLSSFIFSLFAGAFVLAVIFGAIAFVSNQDRVAR 37
>gi|443478907|ref|ZP_21068595.1| Photosystem II reaction center X protein [Pseudanabaena biceps PCC
7429]
gi|443015734|gb|ELS30567.1| Photosystem II reaction center X protein [Pseudanabaena biceps PCC
7429]
Length = 39
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 79 LSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVKR 115
++ SL NFL S+VAGGVVL I AV+ V+ D + R
Sbjct: 1 MTQSLSNFLFSLVAGGVVLGLIFAAVLIVSQKDKIIR 37
>gi|406027968|ref|YP_006726800.1| hypothetical protein LBUCD034_2242 [Lactobacillus buchneri CD034]
gi|405126457|gb|AFS01218.1| hypothetical protein LBUCD034_2242 [Lactobacillus buchneri CD034]
Length = 765
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 5 SMAMPLSSAT----QNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
S +M L AT Q + + + ++ P+ AR L A+L A+ K +A
Sbjct: 279 SNSMLLQQATYTLEQAKFTKDGGQGWIFNFAQNPTFRAREL------AKLNAAATTKRQA 332
Query: 61 VTGLTAAALTASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
V + ++ T A S ++ +L+N++ I A AAI +GVA + VK
Sbjct: 333 VNNDSQSSATDKATAISTINQTLENYITKINADTTDEAAIADRAVGVAEINNVK 386
>gi|296087991|emb|CBI35274.3| unnamed protein product [Vitis vinifera]
Length = 336
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 10 LSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVTGLTAAAL 69
L+ T+ RLI P+ +KP + ++ KP + +L +AV TA L
Sbjct: 150 LNRQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGL 209
Query: 70 TASMAAGSGLSP--------SLKNFLLSIVAGGVVLAAIVGAVIGVANFD 111
S + G G P +K FL+ G+VL +G + G A D
Sbjct: 210 GQSTSVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVL---IGEIGGTAEED 256
>gi|225457502|ref|XP_002268479.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
mitochondrial-like [Vitis vinifera]
Length = 340
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 10 LSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVTGLTAAAL 69
L+ T+ RLI P+ +KP + ++ KP + +L +AV TA L
Sbjct: 154 LNRQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGL 213
Query: 70 TASMAAGSGLSP--------SLKNFLLSIVAGGVVLAAIVGAVIGVANFD 111
S + G G P +K FL+ G+VL +G + G A D
Sbjct: 214 GQSTSVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVL---IGEIGGTAEED 260
>gi|331702489|ref|YP_004399448.1| hypothetical protein Lbuc_2142 [Lactobacillus buchneri NRRL
B-30929]
gi|329129832|gb|AEB74385.1| hypothetical protein Lbuc_2142 [Lactobacillus buchneri NRRL
B-30929]
Length = 763
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 5 SMAMPLSSAT----QNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60
S +M L AT Q + + + ++ P+ AR L A+L A+ K +A
Sbjct: 279 SNSMLLQQATYTLEQAKFTKDGGQGWIFNFGENPTFRAREL------AKLNAAATTKRQA 332
Query: 61 VTGLTAAALTASMAAGSGLSPSLKNFLLSIVAGGVVLAAIVGAVIGVANFDPVK 114
+ + ++ T A S ++ +L+N++ I A AAI +GVA + VK
Sbjct: 333 INNDSQSSATDKATAISTINQTLENYITKINADTTDEAAIADRAVGVAEINNVK 386
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.127 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,440,391,321
Number of Sequences: 23463169
Number of extensions: 47289217
Number of successful extensions: 274247
Number of sequences better than 100.0: 143
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 274038
Number of HSP's gapped (non-prelim): 147
length of query: 116
length of database: 8,064,228,071
effective HSP length: 83
effective length of query: 33
effective length of database: 6,116,785,044
effective search space: 201853906452
effective search space used: 201853906452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)