Query 033568
Match_columns 116
No_of_seqs 146 out of 873
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 05:37:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 6.6E-16 2.3E-20 95.8 8.7 66 1-67 1-67 (68)
2 1cc8_A Protein (metallochapero 99.6 4.3E-14 1.5E-18 87.9 10.1 67 1-67 4-72 (73)
3 3dxs_X Copper-transporting ATP 99.5 1.5E-13 5.2E-18 85.3 8.9 66 1-66 1-71 (74)
4 4a4j_A Pacszia, cation-transpo 99.5 4.3E-13 1.5E-17 82.0 8.3 64 1-64 1-68 (69)
5 2crl_A Copper chaperone for su 99.4 1.5E-12 5.2E-17 86.9 9.9 70 1-70 18-88 (98)
6 3fry_A Probable copper-exporti 99.4 6E-13 2E-17 83.2 6.5 64 1-66 4-69 (73)
7 2roe_A Heavy metal binding pro 99.3 5.9E-12 2E-16 75.9 5.6 61 4-64 2-64 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.3 8.1E-12 2.8E-16 73.5 5.9 57 4-60 3-60 (64)
9 2xmw_A PACS-N, cation-transpor 99.3 5.6E-11 1.9E-15 71.2 9.4 63 1-63 2-68 (71)
10 2l3m_A Copper-ION-binding prot 99.3 4.1E-11 1.4E-15 72.2 8.4 60 1-60 4-67 (71)
11 2qif_A Copper chaperone COPZ; 99.2 1E-10 3.5E-15 68.7 8.7 60 1-60 1-64 (69)
12 1osd_A MERP, hypothetical prot 99.2 5.8E-11 2E-15 71.5 7.8 64 1-64 2-70 (72)
13 1y3j_A Copper-transporting ATP 99.2 6.7E-11 2.3E-15 72.9 7.8 65 1-65 2-71 (77)
14 2k2p_A Uncharacterized protein 99.2 2.8E-11 9.7E-16 78.6 6.1 60 1-60 21-81 (85)
15 1mwy_A ZNTA; open-faced beta-s 99.2 1.8E-10 6E-15 70.4 9.0 61 1-61 2-64 (73)
16 1aw0_A Menkes copper-transport 99.2 1.4E-10 4.9E-15 69.7 8.1 62 2-63 3-69 (72)
17 3cjk_B Copper-transporting ATP 99.2 5.5E-10 1.9E-14 68.1 10.0 66 2-67 2-72 (75)
18 1fvq_A Copper-transporting ATP 99.1 3.2E-10 1.1E-14 68.1 8.7 64 3-66 3-70 (72)
19 1kvi_A Copper-transporting ATP 99.1 1.6E-10 5.3E-15 71.4 7.5 65 1-65 7-76 (79)
20 1cpz_A Protein (COPZ); copper 99.1 3.5E-10 1.2E-14 67.1 7.7 61 4-64 2-67 (68)
21 2kyz_A Heavy metal binding pro 99.1 9.5E-11 3.3E-15 70.8 5.0 57 1-60 1-58 (67)
22 1opz_A Potential copper-transp 99.1 2.9E-10 9.9E-15 68.6 6.8 60 1-60 5-68 (76)
23 1q8l_A Copper-transporting ATP 99.1 3.5E-10 1.2E-14 71.5 7.2 64 2-65 9-77 (84)
24 1jww_A Potential copper-transp 99.1 4.3E-10 1.5E-14 69.0 7.3 65 1-65 2-71 (80)
25 1qup_A Superoxide dismutase 1 99.1 5.4E-10 1.9E-14 85.3 9.4 69 2-70 6-75 (222)
26 1yg0_A COP associated protein; 99.1 4.5E-10 1.5E-14 66.3 6.9 58 3-60 2-62 (66)
27 2g9o_A Copper-transporting ATP 99.1 5.3E-10 1.8E-14 72.4 7.5 64 2-65 3-74 (90)
28 2ldi_A Zinc-transporting ATPas 99.1 5.4E-10 1.8E-14 66.2 7.0 60 1-60 2-65 (71)
29 1yjr_A Copper-transporting ATP 99.1 3.8E-10 1.3E-14 68.3 6.4 63 2-64 4-71 (75)
30 2kkh_A Putative heavy metal tr 99.0 1.2E-09 4.1E-14 70.8 8.4 67 1-67 15-86 (95)
31 2kt2_A Mercuric reductase; nme 99.0 4.4E-10 1.5E-14 67.3 5.9 59 5-63 3-65 (69)
32 2ofg_X Zinc-transporting ATPas 99.0 2.5E-09 8.5E-14 72.1 9.3 63 1-63 7-74 (111)
33 1jk9_B CCS, copper chaperone f 99.0 2E-09 6.8E-14 83.6 9.4 68 3-70 8-76 (249)
34 1p6t_A Potential copper-transp 99.0 1.4E-09 4.8E-14 74.8 7.0 65 2-66 74-143 (151)
35 2ew9_A Copper-transporting ATP 99.0 1.7E-09 5.7E-14 73.9 7.3 62 2-63 80-146 (149)
36 2aj0_A Probable cadmium-transp 98.9 3.1E-09 1.1E-13 64.5 6.8 55 2-60 3-58 (71)
37 2ew9_A Copper-transporting ATP 98.9 4.2E-09 1.4E-13 71.9 8.1 64 1-64 3-71 (149)
38 2rop_A Copper-transporting ATP 98.9 1.2E-08 4.2E-13 74.3 8.9 66 2-67 122-192 (202)
39 2rop_A Copper-transporting ATP 98.6 7.6E-08 2.6E-12 70.1 7.4 59 1-59 19-81 (202)
40 1p6t_A Potential copper-transp 98.5 5E-07 1.7E-11 61.8 7.8 60 1-60 5-68 (151)
41 3j09_A COPA, copper-exporting 98.2 3.4E-06 1.2E-10 73.2 7.9 58 3-60 3-64 (723)
42 3bpd_A Uncharacterized protein 93.6 0.11 3.7E-06 35.5 4.7 44 17-60 22-73 (100)
43 2x3d_A SSO6206; unknown functi 93.1 0.17 5.7E-06 34.3 5.0 43 18-60 22-72 (96)
44 2raq_A Conserved protein MTH88 93.0 0.17 5.7E-06 34.4 4.9 44 17-60 22-73 (97)
45 2jsx_A Protein NAPD; TAT, proo 80.5 9.1 0.00031 25.1 7.1 45 14-58 17-62 (95)
46 3cq1_A Putative uncharacterize 75.5 4.5 0.00015 26.3 4.5 33 4-36 43-81 (103)
47 2cpq_A FragIle X mental retard 74.1 11 0.00038 24.7 6.1 42 18-60 35-76 (91)
48 3lno_A Putative uncharacterize 72.1 3.2 0.00011 27.4 3.1 33 4-36 46-85 (108)
49 1uwd_A Hypothetical protein TM 71.0 6.6 0.00023 25.4 4.4 34 3-36 43-82 (103)
50 1t1v_A SH3BGRL3, SH3 domain-bi 69.0 5.9 0.0002 24.6 3.7 37 1-38 1-42 (93)
51 2jsx_A Protein NAPD; TAT, proo 68.6 9.4 0.00032 25.0 4.8 32 3-34 43-74 (95)
52 2yy3_A Elongation factor 1-bet 65.7 9.2 0.00032 25.1 4.3 34 2-35 51-86 (91)
53 2ko1_A CTR148A, GTP pyrophosph 52.7 30 0.001 20.5 4.8 30 5-34 48-77 (88)
54 2gjh_A Designed protein; oblig 50.5 38 0.0013 20.3 4.8 47 1-48 1-51 (62)
55 2e9h_A EIF-5, eukaryotic trans 48.6 23 0.00078 25.5 4.2 27 32-58 72-98 (157)
56 3gzb_A Putative snoal-like pol 47.2 16 0.00055 26.2 3.1 32 25-56 119-151 (154)
57 1gh8_A Translation elongation 46.6 29 0.001 22.5 4.2 34 2-35 49-83 (89)
58 3pro_C Alpha-lytic protease; P 45.6 43 0.0015 24.1 5.3 36 25-60 112-148 (166)
59 3q9p_A Heat shock protein beta 45.3 17 0.00058 22.6 2.8 25 24-48 13-39 (85)
60 2g2k_A EIF-5, eukaryotic trans 42.0 20 0.0007 26.1 3.1 27 32-58 65-91 (170)
61 2wj5_A Heat shock protein beta 40.8 16 0.00053 23.6 2.1 23 24-46 17-41 (101)
62 2kgs_A Uncharacterized protein 37.1 11 0.00039 25.7 1.1 34 18-54 68-101 (132)
63 1b64_A Elongation factor 1-bet 37.0 63 0.0022 21.0 4.7 35 2-36 51-87 (91)
64 1f60_B Elongation factor EEF1B 36.7 49 0.0017 21.6 4.1 33 3-35 55-89 (94)
65 2d74_B Translation initiation 36.2 31 0.0011 24.5 3.2 25 32-58 75-99 (148)
66 2y3m_A Emhofq, protein transpo 35.5 87 0.003 21.5 5.6 20 30-49 136-155 (175)
67 2y1y_A Alpha-crystallin B chai 34.4 23 0.00078 22.2 2.1 23 24-46 12-36 (90)
68 2z30_B TK-subtilisin; thermoco 33.2 51 0.0018 19.4 3.5 26 6-36 35-60 (65)
69 2khp_A Glutaredoxin; thioredox 32.2 64 0.0022 19.0 4.0 35 1-37 5-39 (92)
70 3gla_A Low molecular weight he 32.1 20 0.00068 22.6 1.5 23 25-47 21-45 (100)
71 1qys_A TOP7; alpha-beta, novel 31.3 68 0.0023 21.0 4.1 35 15-50 63-97 (106)
72 3aab_A Putative uncharacterize 30.2 22 0.00077 23.4 1.6 24 24-47 40-66 (123)
73 4fei_A Heat shock protein-rela 30.1 22 0.00077 22.7 1.6 24 24-47 22-47 (102)
74 3l1e_A Alpha-crystallin A chai 28.7 32 0.0011 22.3 2.1 22 25-46 19-42 (106)
75 2ctf_A Vigilin; K homology typ 28.0 90 0.0031 20.2 4.3 28 18-46 48-75 (102)
76 2fwh_A Thiol:disulfide interch 27.5 1.2E+02 0.0041 19.2 5.0 35 4-38 34-75 (134)
77 2qip_A Protein of unknown func 27.0 34 0.0012 23.6 2.2 30 38-67 110-141 (165)
78 2k1h_A Uncharacterized protein 26.8 1.3E+02 0.0046 19.4 5.8 38 19-58 41-80 (94)
79 2cuy_A Malonyl COA-[acyl carri 25.7 1.2E+02 0.0041 22.9 5.3 51 16-67 137-189 (305)
80 4eld_A MJ16.5-P1, small heat s 25.5 37 0.0013 23.4 2.1 23 25-47 73-97 (161)
81 1vbk_A Hypothetical protein PH 24.5 1.2E+02 0.004 23.2 5.0 43 15-59 26-68 (307)
82 1gme_A Heat shock protein 16.9 23.7 50 0.0017 22.7 2.5 23 24-46 59-84 (151)
83 3ami_A Zinc peptidase; alpha/b 22.6 64 0.0022 24.7 3.2 21 40-60 191-212 (445)
84 2ct6_A SH3 domain-binding glut 22.5 1.3E+02 0.0043 19.1 4.2 35 3-38 9-48 (111)
85 2hh2_A KH-type splicing regula 21.3 1E+02 0.0035 19.9 3.6 36 19-57 28-71 (107)
86 2y9k_A Protein INVG; protein t 20.0 1.6E+02 0.0055 19.6 4.5 35 17-51 87-124 (137)
87 2p0g_A Selenoprotein W-related 20.0 1.8E+02 0.0062 19.2 4.6 47 12-58 11-78 (105)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.65 E-value=6.6e-16 Score=95.84 Aligned_cols=66 Identities=23% Similarity=0.304 Sum_probs=62.7
Q ss_pred CeEEEEEEeccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEee
Q 033568 1 MKKAVFKVGVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 1 M~kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv 67 (116)
|++++|+|+|+|.+|.+++.++|.+++|| ++.+|+.+++++|.|++++..|.++|++.| .+.++++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 78999999999999999999999999999 999999999999999999999999999999 8988864
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.56 E-value=4.3e-14 Score=87.92 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=62.8
Q ss_pred CeEEEEEEeccchhhHHHHHHHHhCCC-CccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEee
Q 033568 1 MKKAVFKVGVDDKKARTKVLKTMVGLA-GVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 1 M~kvvlKV~m~C~~C~~kv~k~ls~l~-GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv 67 (116)
|++++|+|+|+|.+|.+++.++|++++ ||.++.+|+..++++|.+.+++..|.++|++.| .+.++.+
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQ 72 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeeec
Confidence 578999999999999999999999999 999999999999999999999999999999999 7777653
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.50 E-value=1.5e-13 Score=85.27 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=62.0
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEEe
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIVS 66 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivs 66 (116)
|++++|.| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|..+|++.| .+++++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 89999999 99999999999999999999999999999999999864 79999999999999 788775
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.45 E-value=4.3e-13 Score=81.97 Aligned_cols=64 Identities=14% Similarity=0.295 Sum_probs=59.3
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEE--eeCCHHHHHHHHHhcC-CeEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVI--GDIDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~--G~vDp~~lv~~LrK~g-~aei 64 (116)
.++++|.| +|+|.+|.+++.++|.+++||.++.+|+..++++|. +.+++..|.++|++.| .+++
T Consensus 1 a~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 1 AQTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp CEEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 37899999 999999999999999999999999999999999998 5699999999999999 6654
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=86.87 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=64.9
Q ss_pred CeEEEEEEeccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEeeCCC
Q 033568 1 MKKAVFKVGVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVSVGPA 70 (116)
Q Consensus 1 M~kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~ 70 (116)
|.+++|+|.|+|.+|.++|.++|.+++||.++.+|+..++++|.+.+++..|.++|++.| .+.++..+..
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 467889999999999999999999999999999999999999999999999999999999 8888876655
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.40 E-value=6e-13 Score=83.19 Aligned_cols=64 Identities=19% Similarity=0.286 Sum_probs=60.1
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEe
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVS 66 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivs 66 (116)
|++++|+| +|+|.+|..++.++|.+ +||.++.+|+..++++|.++ ++..|..+|++.| .+.+++
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 78899999 99999999999999999 99999999999999999999 9999999999999 676654
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.28 E-value=5.9e-12 Score=75.86 Aligned_cols=61 Identities=23% Similarity=0.300 Sum_probs=55.5
Q ss_pred EEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEE
Q 033568 4 AVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 4 vvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aei 64 (116)
+.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|.+.+++..|.++|++.| .+..
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence 36888 8999999999999999999999999999999999977799999999999998 5543
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.27 E-value=8.1e-12 Score=73.54 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=54.6
Q ss_pred EEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC
Q 033568 4 AVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC 60 (116)
Q Consensus 4 vvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 60 (116)
++|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|.+.+++..|.++|++.|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G 60 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAG 60 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTT
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcC
Confidence 68999 8999999999999999999999999999999999998899999999999988
No 9
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.26 E-value=5.6e-11 Score=71.17 Aligned_cols=63 Identities=11% Similarity=0.183 Sum_probs=56.1
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee--CCHHHHHHHHHhcC-CeE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD--IDLVSLVSKLKKLC-HAE 63 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g-~ae 63 (116)
|+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++.| .+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHAR 68 (71)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEE
T ss_pred CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCce
Confidence 47789999 89999999999999999999999999999999999865 78889999999988 444
No 10
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.25 E-value=4.1e-11 Score=72.16 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=55.6
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
|+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.+.|++.|
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 67 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQG 67 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTT
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 67889999 89999999999999999999999999999999999854 78889999999888
No 11
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.22 E-value=1e-10 Score=68.68 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=55.7
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
|.++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|...|+..|
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 64 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQG 64 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 78889999 89999999999999999999999999999999999854 68888999999888
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.22 E-value=5.8e-11 Score=71.49 Aligned_cols=64 Identities=14% Similarity=0.189 Sum_probs=57.5
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 64 (116)
|+++.|+| +|+|.+|..++.++|.+++||.++.+|+..++++|..+ +++..|.+.|++.| .+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 46788999 99999999999999999999999999999999999865 68889999999988 5543
No 13
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.21 E-value=6.7e-11 Score=72.95 Aligned_cols=65 Identities=14% Similarity=0.155 Sum_probs=59.6
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIV 65 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeiv 65 (116)
|+++.|+| +|+|.+|..++.++|.+++||.++.+|+..++++|..+ +++..|.++|+..| .+.++
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence 89999999 99999999999999999999999999999999999864 68889999999999 66654
No 14
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.20 E-value=2.8e-11 Score=78.60 Aligned_cols=60 Identities=10% Similarity=0.032 Sum_probs=56.6
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 60 (116)
|++++|+| +|+|..|.+++.++|.+++||.++.+|+..++++|.+++++..|.++|++.|
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~G 81 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAG 81 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTT
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcC
Confidence 56788999 9999999999999999999999999999999999999999999999999988
No 15
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.19 E-value=1.8e-10 Score=70.36 Aligned_cols=61 Identities=28% Similarity=0.223 Sum_probs=55.2
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeC-CHHHHHHHHHhcCC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDI-DLVSLVSKLKKLCH 61 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~v-Dp~~lv~~LrK~g~ 61 (116)
|+++.|.| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+- ....|.+.|+..|+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy 64 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGY 64 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCC
Confidence 88899999 899999999999999999999999999999999998763 36678888998883
No 16
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.18 E-value=1.4e-10 Score=69.70 Aligned_cols=62 Identities=15% Similarity=0.176 Sum_probs=56.1
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeE
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAE 63 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~ae 63 (116)
+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++.| .+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDAT 69 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcE
Confidence 4678999 99999999999999999999999999999999999875 68889999999988 444
No 17
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.15 E-value=5.5e-10 Score=68.10 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=58.7
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEEee
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 67 (116)
.++.|.| +|+|.+|..++.++|.+++||.++.+|+..++++|..+ +++..|.+.|++.| .+.+...
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNI 72 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeecC
Confidence 4678999 99999999999999999999999999999999999864 68889999999999 6766543
No 18
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.15 E-value=3.2e-10 Score=68.13 Aligned_cols=64 Identities=16% Similarity=0.237 Sum_probs=57.6
Q ss_pred EEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee--CCHHHHHHHHHhcC-CeEEEe
Q 033568 3 KAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD--IDLVSLVSKLKKLC-HAEIVS 66 (116)
Q Consensus 3 kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g-~aeivs 66 (116)
++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++.| .+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 478999 89999999999999999999999999999999999864 78889999999999 777653
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.15 E-value=1.6e-10 Score=71.42 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=58.1
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIV 65 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeiv 65 (116)
++++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++.| .+.+.
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEec
Confidence 46788999 99999999999999999999999999999999999864 67889999999999 56554
No 20
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.11 E-value=3.5e-10 Score=67.07 Aligned_cols=61 Identities=20% Similarity=0.340 Sum_probs=54.7
Q ss_pred EEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033568 4 AVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 4 vvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 64 (116)
+.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.+.|++.| .+++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 36888 99999999999999999999999999999999999875 68889999999988 5543
No 21
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.11 E-value=9.5e-11 Score=70.81 Aligned_cols=57 Identities=25% Similarity=0.338 Sum_probs=52.7
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 60 (116)
|+ ++|+| +|+|.+|..++.++|.++ ||.++.+|+..++++|.++.+ ..|..+|++.|
T Consensus 1 m~-~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~G 58 (67)
T 2kyz_A 1 MR-YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEID 58 (67)
T ss_dssp CE-EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTT
T ss_pred Ce-EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcC
Confidence 65 68999 999999999999999999 999999999999999998766 78999999988
No 22
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.09 E-value=2.9e-10 Score=68.63 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=55.3
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
|+++.|+| +|+|.+|..++.++|.+++||.++.+|+..++++|..+ +++..|...|+..|
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 68 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCC
Confidence 67889999 89999999999999999999999999999999999753 68889999999988
No 23
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.09 E-value=3.5e-10 Score=71.53 Aligned_cols=64 Identities=14% Similarity=0.205 Sum_probs=57.4
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEE
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIV 65 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeiv 65 (116)
+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.+.|++.| .+.+.
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 77 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK 77 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEec
Confidence 5678999 99999999999999999999999999999999999874 68889999999999 55443
No 24
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.08 E-value=4.3e-10 Score=69.03 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=58.1
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIV 65 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeiv 65 (116)
|.++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|...|.+.| .+.+.
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK 71 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEec
Confidence 78899999 89999999999999999999999999999999999753 68889999999999 55443
No 25
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.08 E-value=5.4e-10 Score=85.30 Aligned_cols=69 Identities=12% Similarity=0.279 Sum_probs=63.0
Q ss_pred eEEEEEEeccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEeeCCC
Q 033568 2 KKAVFKVGVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVSVGPA 70 (116)
Q Consensus 2 ~kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~ 70 (116)
.+++|+|.|+|.+|.+++.++|++++||.++.+|+..++++|.+.+++..|.++|++.| .+.++..++.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 46789999999999999999999999999999999999999999999999999999999 7887765544
No 26
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.07 E-value=4.5e-10 Score=66.26 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=53.1
Q ss_pred EEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee--CCHHHHHHHHHhcC
Q 033568 3 KAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD--IDLVSLVSKLKKLC 60 (116)
Q Consensus 3 kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g 60 (116)
++.|.| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ .++..|.++|++.|
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G 62 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAG 62 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHT
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcC
Confidence 367889 89999999999999999999999999999999999865 57888999999887
No 27
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.06 E-value=5.3e-10 Score=72.43 Aligned_cols=64 Identities=17% Similarity=0.249 Sum_probs=56.2
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhc---C-CeEEE
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKL---C-HAEIV 65 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~---g-~aeiv 65 (116)
.++.|+| +|+|..|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++. | .+.++
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~ 74 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSIT 74 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEe
Confidence 3578999 99999999999999999999999999999999999863 6888999999998 4 45444
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.06 E-value=5.4e-10 Score=66.25 Aligned_cols=60 Identities=22% Similarity=0.346 Sum_probs=54.7
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
|+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ ++...|...|+..|
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 65 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 65 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTT
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 56788999 89999999999999999999999999999999999854 67788999999888
No 29
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.06 E-value=3.8e-10 Score=68.29 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=55.4
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 64 (116)
+++.|+| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ +++..|.+.|+..| .+.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 4578899 99999999999999999999999999999999999875 56778899999888 4443
No 30
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.04 E-value=1.2e-09 Score=70.80 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=59.3
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEEee
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 67 (116)
|.++.|.| +|+|.+|...+.++|..++||.++.+|+..++++|..+ +++..|...|+..| .+.+...
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 86 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence 67789999 99999999999999999999999999999999999875 57889999999999 5655433
No 31
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.04 E-value=4.4e-10 Score=67.34 Aligned_cols=59 Identities=15% Similarity=0.159 Sum_probs=53.3
Q ss_pred EEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee--CCHHHHHHHHHhcC-CeE
Q 033568 5 VFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD--IDLVSLVSKLKKLC-HAE 63 (116)
Q Consensus 5 vlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g-~ae 63 (116)
.|.| +|+|.+|.+++.++|.+++||.++.+|+..++++|..+ .++..|..+|++.| .+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~ 65 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKAT 65 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceE
Confidence 5788 99999999999999999999999999999999999765 68889999999988 443
No 32
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.01 E-value=2.5e-09 Score=72.06 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=57.3
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAE 63 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~ae 63 (116)
|++++|+| +|+|..|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|+..| .+.
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~ 74 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 74 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEE
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeee
Confidence 67889999 89999999999999999999999999999999999865 67889999999988 443
No 33
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.99 E-value=2e-09 Score=83.64 Aligned_cols=68 Identities=12% Similarity=0.293 Sum_probs=62.9
Q ss_pred EEEEEEeccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC-CeEEEeeCCC
Q 033568 3 KAVFKVGVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC-HAEIVSVGPA 70 (116)
Q Consensus 3 kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~ 70 (116)
+++|+|.|+|.+|.++|.++|++++||.++.+|+..++++|.+.+++..|.++|++.| .+.++..++.
T Consensus 8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 4788889999999999999999999999999999999999999999999999999999 7888776554
No 34
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.97 E-value=1.4e-09 Score=74.76 Aligned_cols=65 Identities=20% Similarity=0.285 Sum_probs=58.3
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEEe
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIVS 66 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivs 66 (116)
.++.|.| +|+|..|.+++.++|.+++||.++.+|+..++++|..+ +++..|.++|++.| .+.+++
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 4678999 99999999999999999999999999999999999853 78999999999999 666543
No 35
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.97 E-value=1.7e-09 Score=73.85 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=56.2
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeE
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAE 63 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~ae 63 (116)
.++.|+| +|+|.+|..++.++|++++||.++.+|+..++++|..+ +++..|.++|++.| .+.
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 146 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHAS 146 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEE
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceE
Confidence 3578999 99999999999999999999999999999999999865 68899999999999 454
No 36
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.93 E-value=3.1e-09 Score=64.50 Aligned_cols=55 Identities=22% Similarity=0.414 Sum_probs=48.9
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC 60 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 60 (116)
++++|.| +|+|.+|..++.++|.+++||.++.+|+..++++|.++.+ ...|++.|
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~G 58 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAG 58 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHH
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhC
Confidence 4778999 8999999999999999999999999999999999998765 34666666
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.93 E-value=4.2e-09 Score=71.86 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=57.9
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEI 64 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 64 (116)
|++++|.| +|+|.+|..++.++|.+++||.++.+|+..++++|..+ +++..|..+|+..| .+.+
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAV 71 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEe
Confidence 78999999 99999999999999999999999999999999999763 67889999999988 5544
No 38
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.85 E-value=1.2e-08 Score=74.27 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=57.9
Q ss_pred eEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC-CeEEEee
Q 033568 2 KKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 2 ~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 67 (116)
.++.|+| +|+|.+|..+|.++|.+++||.++.+|+..++++|..+ +++..|..+|++.| .+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 4578999 99999999999999999999999999999999999864 68899999999999 6766543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.64 E-value=7.6e-08 Score=70.06 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=53.5
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhc
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKL 59 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~ 59 (116)
|+++.|+| +|+|.+|..++.++|.+++||.++.+++..++++|..+ +++..|..+|+..
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 46788999 89999999999999999999999999999999999864 6788899999987
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.49 E-value=5e-07 Score=61.76 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=53.6
Q ss_pred CeEEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 1 MKKAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 1 M~kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
|++..|.| +|+|.+|..++.++|.+++||.++.+++..++++|..+ +++..|...++..|
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 68 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHT
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcC
Confidence 56678999 89999999999999999999999999999999998753 67888999898877
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.20 E-value=3.4e-06 Score=73.20 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=54.3
Q ss_pred EEEEEE-eccchhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee---CCHHHHHHHHHhcC
Q 033568 3 KAVFKV-GVDDKKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD---IDLVSLVSKLKKLC 60 (116)
Q Consensus 3 kvvlKV-~m~C~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g 60 (116)
+++|+| +|+|.+|..++.++|.+++||.++.+|...++++|..+ +++..|.+++++.|
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~G 64 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG 64 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcC
Confidence 368999 99999999999999999999999999999999999753 79999999999998
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=93.64 E-value=0.11 Score=35.45 Aligned_cols=44 Identities=18% Similarity=0.393 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCCccEEEe-----eCCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033568 17 TKVLKTMVGLAGVDTASM-----DEKEK--KLTVIGD-IDLVSLVSKLKKLC 60 (116)
Q Consensus 17 ~kv~k~ls~l~GV~sV~v-----D~~~~--kvtV~G~-vDp~~lv~~LrK~g 60 (116)
-.+-+.|++++||+.|.+ |.+.. ++||.|+ +|...|.++|.+.|
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~G 73 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMG 73 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 346688999999998765 33432 7888998 99999999999987
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=93.12 E-value=0.17 Score=34.28 Aligned_cols=43 Identities=14% Similarity=0.291 Sum_probs=35.1
Q ss_pred HHHHHHhCCCCccEEEe-----eCCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033568 18 KVLKTMVGLAGVDTASM-----DEKEK--KLTVIGD-IDLVSLVSKLKKLC 60 (116)
Q Consensus 18 kv~k~ls~l~GV~sV~v-----D~~~~--kvtV~G~-vDp~~lv~~LrK~g 60 (116)
.+-+.|++++||+.|.+ |.+.. ++||.|+ +|...|.++|.+.|
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~G 72 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEG 72 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 45678999999998765 33332 7888998 99999999999987
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=93.05 E-value=0.17 Score=34.36 Aligned_cols=44 Identities=20% Similarity=0.430 Sum_probs=35.3
Q ss_pred HHHHHHHhCCCCccEEEe-----eCCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033568 17 TKVLKTMVGLAGVDTASM-----DEKEK--KLTVIGD-IDLVSLVSKLKKLC 60 (116)
Q Consensus 17 ~kv~k~ls~l~GV~sV~v-----D~~~~--kvtV~G~-vDp~~lv~~LrK~g 60 (116)
-.+-+.|++++||+.|.+ |.+.. ++||.|+ +|...|.++|.+.|
T Consensus 22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~G 73 (97)
T 2raq_A 22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYG 73 (97)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 345678899999988765 44443 7889998 99999999999987
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=80.45 E-value=9.1 Score=25.07 Aligned_cols=45 Identities=16% Similarity=0.290 Sum_probs=31.3
Q ss_pred hhHHHHHHHHhCCCCccEEEeeCCCCeEEEEee-CCHHHHHHHHHh
Q 033568 14 KARTKVLKTMVGLAGVDTASMDEKEKKLTVIGD-IDLVSLVSKLKK 58 (116)
Q Consensus 14 ~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~LrK 58 (116)
+=...+..+|.+++||+--..|...++++|+=+ -+...|.+.|++
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 346889999999999954455776777776644 455556655554
No 46
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=75.49 E-value=4.5 Score=26.29 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=25.8
Q ss_pred EEEEEeccchhh------HHHHHHHHhCCCCccEEEeeC
Q 033568 4 AVFKVGVDDKKA------RTKVLKTMVGLAGVDTASMDE 36 (116)
Q Consensus 4 vvlKV~m~C~~C------~~kv~k~ls~l~GV~sV~vD~ 36 (116)
+.|.+.++..+| ++.+..+|.+++||.+|.+++
T Consensus 43 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 43 AYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 456666666666 478899999999999998864
No 47
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=74.12 E-value=11 Score=24.66 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=30.5
Q ss_pred HHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhcC
Q 033568 18 KVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKLC 60 (116)
Q Consensus 18 kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 60 (116)
+..+.+....|+.+|.++-++++|+|.| .|.+.+-++...+-
T Consensus 35 k~Ik~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~~I~ 76 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARGFLE 76 (91)
T ss_dssp HHHHHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHHHHH
Confidence 3456666778998899997779999999 56666666655433
No 48
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=72.10 E-value=3.2 Score=27.40 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=25.8
Q ss_pred EEEEEeccchhh------HHHHHHHH-hCCCCccEEEeeC
Q 033568 4 AVFKVGVDDKKA------RTKVLKTM-VGLAGVDTASMDE 36 (116)
Q Consensus 4 vvlKV~m~C~~C------~~kv~k~l-s~l~GV~sV~vD~ 36 (116)
+.|.+.++..+| +..+..+| ..++||.+|.+.+
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 556666666666 57788999 9999999998864
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=71.00 E-value=6.6 Score=25.42 Aligned_cols=34 Identities=6% Similarity=0.136 Sum_probs=25.4
Q ss_pred EEEEEEeccchhh------HHHHHHHHhCCCCccEEEeeC
Q 033568 3 KAVFKVGVDDKKA------RTKVLKTMVGLAGVDTASMDE 36 (116)
Q Consensus 3 kvvlKV~m~C~~C------~~kv~k~ls~l~GV~sV~vD~ 36 (116)
.+.|.+.++..+| ++.+..+|..++||.+|.+++
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 3556666665555 467889999999999998864
No 50
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=69.01 E-value=5.9 Score=24.56 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=29.6
Q ss_pred CeEEEEEEeccchhhH-----HHHHHHHhCCCCccEEEeeCCC
Q 033568 1 MKKAVFKVGVDDKKAR-----TKVLKTMVGLAGVDTASMDEKE 38 (116)
Q Consensus 1 M~kvvlKV~m~C~~C~-----~kv~k~ls~l~GV~sV~vD~~~ 38 (116)
|.+|+|=..-.|..|. +++++.|.+. ||.-..+|...
T Consensus 1 M~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~ 42 (93)
T 1t1v_A 1 MSGLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQ 42 (93)
T ss_dssp CCCEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTS
T ss_pred CCCEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCC
Confidence 7788888888899997 8899999886 88766666554
No 51
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=68.59 E-value=9.4 Score=25.00 Aligned_cols=32 Identities=16% Similarity=0.330 Sum_probs=25.7
Q ss_pred EEEEEEeccchhhHHHHHHHHhCCCCccEEEe
Q 033568 3 KAVFKVGVDDKKARTKVLKTMVGLAGVDTASM 34 (116)
Q Consensus 3 kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~v 34 (116)
++++.+.-....--....+.+..++||.|+++
T Consensus 43 kiVV~iEa~~~~~l~~~i~~I~~i~GVlst~l 74 (95)
T 2jsx_A 43 QLIVVVEAEDSETLIQTIESVRNVEGVLAVSL 74 (95)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTSTTEEEEEE
T ss_pred CEEEEEEeCCHHHHHHHHHHHhcCCCccEEeE
Confidence 57788866666666667799999999999987
No 52
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=65.71 E-value=9.2 Score=25.13 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=26.4
Q ss_pred eEEEEEEeccchhh--HHHHHHHHhCCCCccEEEee
Q 033568 2 KKAVFKVGVDDKKA--RTKVLKTMVGLAGVDTASMD 35 (116)
Q Consensus 2 ~kvvlKV~m~C~~C--~~kv~k~ls~l~GV~sV~vD 35 (116)
+++.+.+-|.++.. ...+..++++++||+|+.+-
T Consensus 51 k~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 51 VALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp EEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEE
T ss_pred eeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEE
Confidence 44556666666644 88999999999999999875
No 53
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=52.69 E-value=30 Score=20.47 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=17.2
Q ss_pred EEEEeccchhhHHHHHHHHhCCCCccEEEe
Q 033568 5 VFKVGVDDKKARTKVLKTMVGLAGVDTASM 34 (116)
Q Consensus 5 vlKV~m~C~~C~~kv~k~ls~l~GV~sV~v 34 (116)
+|.+......--..+++.|.+++||.+|..
T Consensus 48 ~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 48 NLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 344444444445666667777777766543
No 54
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=50.47 E-value=38 Score=20.31 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=31.8
Q ss_pred CeEEEEEEeccc----hhhHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCC
Q 033568 1 MKKAVFKVGVDD----KKARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDID 48 (116)
Q Consensus 1 M~kvvlKV~m~C----~~C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vD 48 (116)
|..+.|.+...- ++-..-+.+..+.+ |-..|.+.-+.+++||.|...
T Consensus 1 mervrisitartkkeaekfaailikvfael-gyndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 1 MERVRISITARTKKEAEKFAAILIKVFAEL-GYNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp -CEEEEEEECSSHHHHHHHHHHHHHHHHHT-TCCSCEEEECSSCEEEEEECC
T ss_pred CceEEEEEEecchhHHHHHHHHHHHHHHHh-CcccceeEEcCCEEEEEeEEc
Confidence 555556554433 23344455666777 899999999999999999753
No 55
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.57 E-value=23 Score=25.49 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=23.9
Q ss_pred EEeeCCCCeEEEEeeCCHHHHHHHHHh
Q 033568 32 ASMDEKEKKLTVIGDIDLVSLVSKLKK 58 (116)
Q Consensus 32 V~vD~~~~kvtV~G~vDp~~lv~~LrK 58 (116)
.++|.++++++|.|.+++..|-+.|++
T Consensus 72 g~id~~~~rlii~G~~~~~~i~~~L~~ 98 (157)
T 2e9h_A 72 TQFDVKNDRYIVNGSHEANKLQDMLDG 98 (157)
T ss_dssp EEEETTTTEEEEEBCCCHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 457888899999999999999999975
No 56
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=47.15 E-value=16 Score=26.21 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=27.5
Q ss_pred CCCCccEEEeeCCCCeEEEEee-CCHHHHHHHH
Q 033568 25 GLAGVDTASMDEKEKKLTVIGD-IDLVSLVSKL 56 (116)
Q Consensus 25 ~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~L 56 (116)
+++||+.+.+|+.+.+|+=.-+ +|-..+.+.|
T Consensus 119 aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 119 AIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECHHHHHHHH
T ss_pred ecCceEEEeecCCccchhhhHhHHhHHHHHHHh
Confidence 6899999999999999998777 8887777665
No 57
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=46.55 E-value=29 Score=22.52 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=25.3
Q ss_pred eEEEEEEeccch-hhHHHHHHHHhCCCCccEEEee
Q 033568 2 KKAVFKVGVDDK-KARTKVLKTMVGLAGVDTASMD 35 (116)
Q Consensus 2 ~kvvlKV~m~C~-~C~~kv~k~ls~l~GV~sV~vD 35 (116)
+++.+.+-|.++ .-...+..++++++||+|+.+-
T Consensus 49 k~L~i~~vveD~~~~td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 49 VALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp EEEEEEEEESSSCGGGGHHHHHHTTSCSSEEEEEE
T ss_pred eeEEEEEEEEcCCcChHHHHHHHhccCCccEEEEE
Confidence 344555555544 6678899999999999999875
No 58
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=45.63 E-value=43 Score=24.09 Aligned_cols=36 Identities=19% Similarity=0.059 Sum_probs=24.6
Q ss_pred CCCCccEEEeeCCCCeEEEEee-CCHHHHHHHHHhcC
Q 033568 25 GLAGVDTASMDEKEKKLTVIGD-IDLVSLVSKLKKLC 60 (116)
Q Consensus 25 ~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~LrK~g 60 (116)
.-.||.+-.+|..+|+|+|+-+ -.+......++..|
T Consensus 112 ~~~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG 148 (166)
T 3pro_C 112 PLDGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSG 148 (166)
T ss_dssp -CTTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHT
T ss_pred CCCCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhC
Confidence 3457889999999999999876 23444433334566
No 59
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=45.31 E-value=17 Score=22.62 Aligned_cols=25 Identities=12% Similarity=0.280 Sum_probs=19.6
Q ss_pred hCCCCc--cEEEeeCCCCeEEEEeeCC
Q 033568 24 VGLAGV--DTASMDEKEKKLTVIGDID 48 (116)
Q Consensus 24 s~l~GV--~sV~vD~~~~kvtV~G~vD 48 (116)
..++|+ +.|.+...++.|+|.|.-.
T Consensus 13 ~dlPG~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 13 LDVNHFAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp EECTTTCCSEEEEEEETTEEEEEEEEC
T ss_pred EECCCCChHHEEEEEECCEEEEEEEEc
Confidence 357787 4588888899999999843
No 60
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=42.02 E-value=20 Score=26.09 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=23.5
Q ss_pred EEeeCCCCeEEEEeeCCHHHHHHHHHh
Q 033568 32 ASMDEKEKKLTVIGDIDLVSLVSKLKK 58 (116)
Q Consensus 32 V~vD~~~~kvtV~G~vDp~~lv~~LrK 58 (116)
.++|.++++++|.|.+++..|-+.|++
T Consensus 65 g~id~~~~rliinG~~~~~~i~~~L~~ 91 (170)
T 2g2k_A 65 TQFDVKNDRYIVNGSHEANKLQDMLDG 91 (170)
T ss_dssp CEECTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 357887899999999999999998875
No 61
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=40.76 E-value=16 Score=23.58 Aligned_cols=23 Identities=9% Similarity=0.085 Sum_probs=18.3
Q ss_pred hCCCCcc--EEEeeCCCCeEEEEee
Q 033568 24 VGLAGVD--TASMDEKEKKLTVIGD 46 (116)
Q Consensus 24 s~l~GV~--sV~vD~~~~kvtV~G~ 46 (116)
..|+|+. .|.+...++.|+|.|.
T Consensus 17 ~dlPG~~~edI~V~v~~~~L~I~g~ 41 (101)
T 2wj5_A 17 LDVKHFSPEEISVKVVGDHVEVHAR 41 (101)
T ss_dssp EECTTSCGGGEEEEEETTEEEEEEE
T ss_pred EECCCCcHHHeEEEEECCEEEEEEE
Confidence 3577874 4888888899999997
No 62
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=37.07 E-value=11 Score=25.65 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=20.4
Q ss_pred HHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHH
Q 033568 18 KVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVS 54 (116)
Q Consensus 18 kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~ 54 (116)
.+++.++.++ .+++..+++.||++|.++-..-..
T Consensus 68 ~aL~~~~~l~---~i~V~V~~g~VtLsG~v~s~~~r~ 101 (132)
T 2kgs_A 68 PVFTASVPIP---DFGLKVERDTVTLTGTAPSSEHKD 101 (132)
T ss_dssp HHHHHHTTCT---TCEEEEEETEEEEECEESSHHHHH
T ss_pred HHHHhcCcCC---ceEEEEECCEEEEEEEECCHHHHH
Confidence 3444444443 455666678999999876554333
No 63
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=37.05 E-value=63 Score=20.96 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=25.6
Q ss_pred eEEEEEEeccch-hhHHHHHHHHhCCCC-ccEEEeeC
Q 033568 2 KKAVFKVGVDDK-KARTKVLKTMVGLAG-VDTASMDE 36 (116)
Q Consensus 2 ~kvvlKV~m~C~-~C~~kv~k~ls~l~G-V~sV~vD~ 36 (116)
+++.+.+-|.++ .-...+...++.++| |+|+.+..
T Consensus 51 kkL~i~~vveDd~v~tD~lee~i~~~ed~VqSvdI~~ 87 (91)
T 1b64_A 51 KKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAA 87 (91)
T ss_dssp EEEEEEEEECTTSSCHHHHHHHHTTCTTTEEEEEESC
T ss_pred EEEEEEEEEECCccChHHHHHHHHhccCceeEEEEEE
Confidence 344555556554 567888999999999 99998754
No 64
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=36.69 E-value=49 Score=21.65 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=23.3
Q ss_pred EEEEEEeccch-hhHHHHHHHHhCCCC-ccEEEee
Q 033568 3 KAVFKVGVDDK-KARTKVLKTMVGLAG-VDTASMD 35 (116)
Q Consensus 3 kvvlKV~m~C~-~C~~kv~k~ls~l~G-V~sV~vD 35 (116)
++.+.+-|.++ .-...+...++.++| |+|+.+.
T Consensus 55 kL~i~~vveDd~~~tD~lee~i~~~ed~VqSvdI~ 89 (94)
T 1f60_B 55 KLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIA 89 (94)
T ss_dssp EEEEEEEEETTTCCHHHHHHHHHTCTTTEEEEEEE
T ss_pred EEEEEEEEECCccChHHHHHHHHhccCceeEEEEE
Confidence 34444455544 557888888999999 9988874
No 65
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=36.17 E-value=31 Score=24.50 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=21.8
Q ss_pred EEeeCCCCeEEEEeeCCHHHHHHHHHh
Q 033568 32 ASMDEKEKKLTVIGDIDLVSLVSKLKK 58 (116)
Q Consensus 32 V~vD~~~~kvtV~G~vDp~~lv~~LrK 58 (116)
-++| +++++|.|.+++..|-+.|++
T Consensus 75 g~id--~~rlii~G~~~~~~i~~~L~~ 99 (148)
T 2d74_B 75 GTLE--GRRVVLQGRFTPYLIANKLKK 99 (148)
T ss_dssp EEEE--TTEEEESSCCCHHHHHHHHHH
T ss_pred eeec--CCEEEEEeeeCHHHHHHHHHH
Confidence 4556 789999999999999999986
No 66
>2y3m_A Emhofq, protein transport protein HOFQ; secretin, DNA uptake, competence; 2.30A {Aggregatibacter actinomycetemcomitans}
Probab=35.55 E-value=87 Score=21.45 Aligned_cols=20 Identities=10% Similarity=0.245 Sum_probs=17.0
Q ss_pred cEEEeeCCCCeEEEEeeCCH
Q 033568 30 DTASMDEKEKKLTVIGDIDL 49 (116)
Q Consensus 30 ~sV~vD~~~~kvtV~G~vDp 49 (116)
-+|.+|...|.|+|.|+-+-
T Consensus 136 g~v~~d~~tN~liv~~~~~~ 155 (175)
T 2y3m_A 136 GSITFDDRSNLLLIQDEPRS 155 (175)
T ss_dssp CEEEEETTTTEEEEEECHHH
T ss_pred ceEEEECCCCEEEEEcCHHH
Confidence 38999999999999997433
No 67
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=34.45 E-value=23 Score=22.17 Aligned_cols=23 Identities=9% Similarity=0.124 Sum_probs=18.1
Q ss_pred hCCCCcc--EEEeeCCCCeEEEEee
Q 033568 24 VGLAGVD--TASMDEKEKKLTVIGD 46 (116)
Q Consensus 24 s~l~GV~--sV~vD~~~~kvtV~G~ 46 (116)
..++|+. .|.+...++.|+|.|.
T Consensus 12 ~dlPG~~~edi~V~v~~~~L~I~g~ 36 (90)
T 2y1y_A 12 LDVKHFSPEELKVKVLGDVIEVHGK 36 (90)
T ss_dssp EECTTSCGGGEEEEEETTEEEEEEE
T ss_pred EECCCCcHHHeEEEEECCEEEEEEE
Confidence 3577875 4888888899999996
No 68
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=33.20 E-value=51 Score=19.41 Aligned_cols=26 Identities=19% Similarity=0.366 Sum_probs=18.7
Q ss_pred EEEeccchhhHHHHHHHHhCCCCccEEEeeC
Q 033568 6 FKVGVDDKKARTKVLKTMVGLAGVDTASMDE 36 (116)
Q Consensus 6 lKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~ 36 (116)
+.+.|.+.. .+.|++++||..|+-|.
T Consensus 35 ~~~~lp~~~-----~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 35 VVVDVPANA-----VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEEECGGG-----HHHHHTSTTEEEEEECC
T ss_pred EEEEeCHHH-----HHHHhcCCCceEEecCc
Confidence 344555544 46788999999999884
No 69
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=32.25 E-value=64 Score=19.03 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=22.6
Q ss_pred CeEEEEEEeccchhhHHHHHHHHhCCCCccEEEeeCC
Q 033568 1 MKKAVFKVGVDDKKARTKVLKTMVGLAGVDTASMDEK 37 (116)
Q Consensus 1 M~kvvlKV~m~C~~C~~kv~k~ls~l~GV~sV~vD~~ 37 (116)
|.++++--.-.|..|++ ++..|... |+.-..+|..
T Consensus 5 m~~v~ly~~~~C~~C~~-~~~~L~~~-~i~~~~~di~ 39 (92)
T 2khp_A 5 MVDVIIYTRPGCPYCAR-AKALLARK-GAEFNEIDAS 39 (92)
T ss_dssp CCCEEEEECTTCHHHHH-HHHHHHHT-TCCCEEEEST
T ss_pred cccEEEEECCCChhHHH-HHHHHHHc-CCCcEEEECC
Confidence 45566655778999974 56667665 6665555543
No 70
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=32.14 E-value=20 Score=22.61 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=17.8
Q ss_pred CCCCcc--EEEeeCCCCeEEEEeeC
Q 033568 25 GLAGVD--TASMDEKEKKLTVIGDI 47 (116)
Q Consensus 25 ~l~GV~--sV~vD~~~~kvtV~G~v 47 (116)
.|+|+. .|++...++.|+|.|..
T Consensus 21 ~lPG~~~edi~v~~~~~~L~I~g~~ 45 (100)
T 3gla_A 21 DLPGIDPSQIEVQMDKGILSIRGER 45 (100)
T ss_dssp ECTTSCGGGCEEEEETTEEEEEEEE
T ss_pred ECCCCCHHHEEEEEECCEEEEEEEE
Confidence 567774 47777788999999973
No 71
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=31.31 E-value=68 Score=21.00 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=25.4
Q ss_pred hHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHH
Q 033568 15 ARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLV 50 (116)
Q Consensus 15 C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~ 50 (116)
-..-+.+..+.+ |-..|.+..+..++||.|...--
T Consensus 63 faailikvfael-gyndinvtfdgdtvtvegqlegg 97 (106)
T 1qys_A 63 FAAILIKVFAEL-GYNDINVTFDGDTVTVEGQLEGG 97 (106)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEETTEEEEEEEC---
T ss_pred HHHHHHHHHHHh-CCcceeEEEcCCeEEEEeEEcCC
Confidence 344455666777 99999999999999999986543
No 72
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=30.17 E-value=22 Score=23.42 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=18.4
Q ss_pred hCCCCcc--EEEeeCCC-CeEEEEeeC
Q 033568 24 VGLAGVD--TASMDEKE-KKLTVIGDI 47 (116)
Q Consensus 24 s~l~GV~--sV~vD~~~-~kvtV~G~v 47 (116)
..|+|+. .|++...+ +.|+|.|.-
T Consensus 40 ~~lPG~~~edi~V~v~~~~~L~I~g~~ 66 (123)
T 3aab_A 40 ADLAGFNKEKIKARVSGQNELIIEAER 66 (123)
T ss_dssp EECCSCCGGGCEEEEETTTEEEEEEEC
T ss_pred EECCCCCHHHEEEEEeCCCEEEEEEEE
Confidence 3578884 47777777 899999984
No 73
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=30.09 E-value=22 Score=22.68 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=18.7
Q ss_pred hCCCCcc--EEEeeCCCCeEEEEeeC
Q 033568 24 VGLAGVD--TASMDEKEKKLTVIGDI 47 (116)
Q Consensus 24 s~l~GV~--sV~vD~~~~kvtV~G~v 47 (116)
..|+||. .|++...++.|+|.|..
T Consensus 22 ~~lPG~~~edi~v~~~~~~L~I~g~~ 47 (102)
T 4fei_A 22 LDVPGVDAGTLALAEDGGQLTVSGER 47 (102)
T ss_dssp EECTTCCGGGCEEEEETTEEEEEEEE
T ss_pred EECCCCchHhEEEEEECCEEEEEEEE
Confidence 3578874 57777888999999974
No 74
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=28.72 E-value=32 Score=22.29 Aligned_cols=22 Identities=9% Similarity=0.202 Sum_probs=17.7
Q ss_pred CCCCcc--EEEeeCCCCeEEEEee
Q 033568 25 GLAGVD--TASMDEKEKKLTVIGD 46 (116)
Q Consensus 25 ~l~GV~--sV~vD~~~~kvtV~G~ 46 (116)
.|+|+. .|.+...++.|+|.|.
T Consensus 19 dlPG~~~edi~V~v~~~~L~I~g~ 42 (106)
T 3l1e_A 19 DVKHFSPEDLTVKVQEDFVEIHGK 42 (106)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCChHHEEEEEECCEEEEEEE
Confidence 567874 4888888899999995
No 75
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=28.02 E-value=90 Score=20.15 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=19.2
Q ss_pred HHHHHHhCCCCccEEEeeCCCCeEEEEee
Q 033568 18 KVLKTMVGLAGVDTASMDEKEKKLTVIGD 46 (116)
Q Consensus 18 kv~k~ls~l~GV~sV~vD~~~~kvtV~G~ 46 (116)
.+++......|| .|.+...++.+||.|.
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~~~~~ItI~G~ 75 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTEGEDKITLEGP 75 (102)
T ss_dssp HHHHHHHHCSSS-EEEECSSSCEEEEEEC
T ss_pred cHHHHHHHcCCc-EEEeCCCCCEEEEECC
Confidence 444555556675 5666656789999998
No 76
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=27.52 E-value=1.2e+02 Score=19.15 Aligned_cols=35 Identities=6% Similarity=-0.102 Sum_probs=21.1
Q ss_pred EEEEE-eccchhhHHHH------HHHHhCCCCccEEEeeCCC
Q 033568 4 AVFKV-GVDDKKARTKV------LKTMVGLAGVDTASMDEKE 38 (116)
Q Consensus 4 vvlKV-~m~C~~C~~kv------~k~ls~l~GV~sV~vD~~~ 38 (116)
++|-+ .-.|..|++-. .+....+.|+.-+.+|...
T Consensus 34 vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~ 75 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTA 75 (134)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTT
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCC
Confidence 44555 55699998743 2334455677777776543
No 77
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=26.99 E-value=34 Score=23.57 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=24.6
Q ss_pred CCeEEEEeeCCHHHHHHHHHhc-C-CeEEEee
Q 033568 38 EKKLTVIGDIDLVSLVSKLKKL-C-HAEIVSV 67 (116)
Q Consensus 38 ~~kvtV~G~vDp~~lv~~LrK~-g-~aeivsv 67 (116)
+.-+.|+|+-|-.-++++||.. | .+.++++
T Consensus 110 d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 110 DRVILVSGDGDFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp SEEEEECCCGGGHHHHHHHHHHHCCEEEEEEC
T ss_pred CEEEEEECChhHHHHHHHHHHHcCcEEEEEeC
Confidence 3457788999999999999984 9 7888865
No 78
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=26.76 E-value=1.3e+02 Score=19.44 Aligned_cols=38 Identities=8% Similarity=0.217 Sum_probs=28.9
Q ss_pred HHHHHhCCCCccEEEeeCCCCeEEEEee--CCHHHHHHHHHh
Q 033568 19 VLKTMVGLAGVDTASMDEKEKKLTVIGD--IDLVSLVSKLKK 58 (116)
Q Consensus 19 v~k~ls~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK 58 (116)
.-+.|-.++||++|-+. .+-+||+-. +|-..|.-.++.
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 45566689999999886 567888763 788777777664
No 79
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=25.70 E-value=1.2e+02 Score=22.86 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCCCccEEEeeCCCCeEEEEee-CCHHHHHHHHHhcC-CeEEEee
Q 033568 16 RTKVLKTMVGLAGVDTASMDEKEKKLTVIGD-IDLVSLVSKLKKLC-HAEIVSV 67 (116)
Q Consensus 16 ~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~LrK~g-~aeivsv 67 (116)
...+...+...+|| .|......+.++|.|+ -+...+...|+..| .+..+.+
T Consensus 137 ~~~v~~~l~~~~~v-~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~L~v 189 (305)
T 2cuy_A 137 LEEIQKALEGLEGV-EIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPV 189 (305)
T ss_dssp HHHHHHHHTTCSSE-EEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHhhcCCe-EEEEEecCCcEEEEcCHHHHHHHHHHHHhCCceEEECCC
Confidence 45567777777774 3444444568999999 45556788888777 5555544
No 80
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=25.53 E-value=37 Score=23.44 Aligned_cols=23 Identities=17% Similarity=0.237 Sum_probs=17.3
Q ss_pred CCCCcc--EEEeeCCCCeEEEEeeC
Q 033568 25 GLAGVD--TASMDEKEKKLTVIGDI 47 (116)
Q Consensus 25 ~l~GV~--sV~vD~~~~kvtV~G~v 47 (116)
.|+||. .|.|...++.|+|.|.-
T Consensus 73 dlPG~~~edi~V~~~~~~L~I~g~~ 97 (161)
T 4eld_A 73 WLPGVNKEDIILNAVGDTLEIRAKR 97 (161)
T ss_dssp ECTTCCGGGEEEEEETTEEEEEEEC
T ss_pred ECCCCChHhEEEEEECCEEEEEEEE
Confidence 567774 47788888899998863
No 81
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=24.46 E-value=1.2e+02 Score=23.23 Aligned_cols=43 Identities=9% Similarity=0.119 Sum_probs=31.2
Q ss_pred hHHHHHHHHhCCCCccEEEeeCCCCeEEEEeeCCHHHHHHHHHhc
Q 033568 15 ARTKVLKTMVGLAGVDTASMDEKEKKLTVIGDIDLVSLVSKLKKL 59 (116)
Q Consensus 15 C~~kv~k~ls~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~ 59 (116)
..+.++++|.. +++..-.+....+++.|.++ |+..++++|+++
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~~gri~V~~~-~~~~~~~~L~~v 68 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSRHGRIIVKTN-SPKEAANVLVRV 68 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEETTEEEEECS-CHHHHHHHHTTS
T ss_pred HHHHHHHHhcc-cCccceeEEEECCEEEEEcC-CHHHHHHHHhhc
Confidence 56778888887 66662113445678888875 888999999984
No 82
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=23.66 E-value=50 Score=22.69 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=17.2
Q ss_pred hCCCCcc--EEEeeC-CCCeEEEEee
Q 033568 24 VGLAGVD--TASMDE-KEKKLTVIGD 46 (116)
Q Consensus 24 s~l~GV~--sV~vD~-~~~kvtV~G~ 46 (116)
..|+||. .|.+.. .++.|+|.|.
T Consensus 59 ~dlPGv~kedI~V~v~~~~~L~I~g~ 84 (151)
T 1gme_A 59 ADLPGVKKEEVKVEVEDGNVLVVSGE 84 (151)
T ss_dssp EECTTCCGGGEEEEEETTTEEEEEEC
T ss_pred EECCCCChHHEEEEEecCCEEEEEEE
Confidence 3577874 477877 5679999996
No 83
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=22.62 E-value=64 Score=24.70 Aligned_cols=21 Identities=14% Similarity=0.349 Sum_probs=18.5
Q ss_pred eEEEEeeCCHHHHHHHHHh-cC
Q 033568 40 KLTVIGDIDLVSLVSKLKK-LC 60 (116)
Q Consensus 40 kvtV~G~vDp~~lv~~LrK-~g 60 (116)
.+.|.|++|+..+...+++ ++
T Consensus 191 ~l~vvGd~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 191 TVVVVGDVEHEAVFRLAEQTYG 212 (445)
T ss_dssp EEEEEESCCHHHHHHHHHHTGG
T ss_pred EEEEEcCCCHHHHHHHHHHHhc
Confidence 7889999999999999987 44
No 84
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.46 E-value=1.3e+02 Score=19.08 Aligned_cols=35 Identities=6% Similarity=-0.003 Sum_probs=26.1
Q ss_pred EEEEEEeccchhhHH-----HHHHHHhCCCCccEEEeeCCC
Q 033568 3 KAVFKVGVDDKKART-----KVLKTMVGLAGVDTASMDEKE 38 (116)
Q Consensus 3 kvvlKV~m~C~~C~~-----kv~k~ls~l~GV~sV~vD~~~ 38 (116)
+|+|-..-.|..|.. ++++.|... ||.-..+|...
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~ 48 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM 48 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC
Confidence 355555678999996 899999886 88766666654
No 85
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=21.34 E-value=1e+02 Score=19.85 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=22.5
Q ss_pred HHHHHhCCCCccEEEeeCCC--------CeEEEEeeCCHHHHHHHHH
Q 033568 19 VLKTMVGLAGVDTASMDEKE--------KKLTVIGDIDLVSLVSKLK 57 (116)
Q Consensus 19 v~k~ls~l~GV~sV~vD~~~--------~kvtV~G~vDp~~lv~~Lr 57 (116)
..+.|....|+ +|.++... +.|+|.| +++.+..++.
T Consensus 28 ~Ik~I~~~TGa-~I~I~~~~~~~~~~~~r~V~I~G--~~e~v~~A~~ 71 (107)
T 2hh2_A 28 NVKAINQQTGA-FVEISRQLPPNGDPNFKLFIIRG--SPQQIDHAKQ 71 (107)
T ss_dssp HHHHHHHHSSS-EEEECCCCCTTCCTTEEEEEEES--CHHHHHHHHH
T ss_pred HHHHHHHHhCC-EEEEcCccCCCCCCCceEEEEEC--CHHHHHHHHH
Confidence 34556666787 48887642 5899999 4445544443
No 86
>2y9k_A Protein INVG; protein transport, type III secretion system, outer membrane secretin family, C15 fold; 8.30A {Salmonella enterica subsp}
Probab=20.05 E-value=1.6e+02 Score=19.58 Aligned_cols=35 Identities=11% Similarity=-0.010 Sum_probs=23.6
Q ss_pred HHHHHHHhCC---CCccEEEeeCCCCeEEEEeeCCHHH
Q 033568 17 TKVLKTMVGL---AGVDTASMDEKEKKLTVIGDIDLVS 51 (116)
Q Consensus 17 ~kv~k~ls~l---~GV~sV~vD~~~~kvtV~G~vDp~~ 51 (116)
+.+.+.|..+ +.--++.+|..+|.+.|+|.-.-..
T Consensus 87 ~~l~~~L~~~~ll~~rg~v~~d~~tn~l~v~g~~~~v~ 124 (137)
T 2y9k_A 87 NEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVD 124 (137)
T ss_dssp HHHHHHHCCTTCCCSSSCEEECSSTTEEEEEECHHHHH
T ss_pred HHHHHHHHHcCCCCCCCceEECCCCCEEEEECcHHHHH
Confidence 4455555544 3344699999999999999843333
No 87
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=20.02 E-value=1.8e+02 Score=19.23 Aligned_cols=47 Identities=4% Similarity=0.074 Sum_probs=30.6
Q ss_pred chhhH------HHHHHHHhCCCC-ccEEEeeCCC-C--eEEEEe-----------eCCHHHHHHHHHh
Q 033568 12 DKKAR------TKVLKTMVGLAG-VDTASMDEKE-K--KLTVIG-----------DIDLVSLVSKLKK 58 (116)
Q Consensus 12 C~~C~------~kv~k~ls~l~G-V~sV~vD~~~-~--kvtV~G-----------~vDp~~lv~~LrK 58 (116)
|..|. .=+...++.+++ +.+|+..+.. + .|+|.| -.|+..|...||.
T Consensus 11 C~~C~w~~Ra~~laqeLl~tF~~~l~~v~l~P~~~G~FEV~vng~lV~SKk~~ggFPe~~eLkq~Vrd 78 (105)
T 2p0g_A 11 CRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRD 78 (105)
T ss_dssp ETTTTCHHHHHHHHHHHHHHTTTTEEEEEEEEESTTCEEEEETTEEEEEHHHHTSCCCHHHHHHHHHT
T ss_pred CCCCCChHHHHHHHHHHHHHcCcccceEEEEeCCCceEEEEECCEEEEEEecCCCCCCHHHHHHHHHH
Confidence 66664 345667777776 5577776644 4 444443 2589899989886
Done!