BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033572
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C1W5|TIM16_SCHPO Mitochondrial import inner membrane translocase subunit tim16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pam16 PE=3 SV=1
Length = 128
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQ----ETVQNIRRASKMMAEPEAR 58
R + + I++GS +M++A VQAY+Q +ANA++ Q ++ +RR M EA
Sbjct: 4 PRAVGRFIIVGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGE--MTIQEAG 61
Query: 59 QILGVTEQSSWE-EILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLETVYQKKHQ 111
IL + +S E E+ K++ +FE N K GSFYLQSKV RA E L++ +K Q
Sbjct: 62 SILNIKPESLEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKSELDQKIQ 117
>sp|Q9VF08|TIM16_DROME Mitochondrial import inner membrane translocase subunit Tim16
OS=Drosophila melanogaster GN=blp PE=2 SV=1
Length = 141
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 13/111 (11%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALAN----ASKSGVAQETVQ----NIRRASKMMAE 54
A+ IAQ+IV+G+ + RA +A RQ +A A ++G ++ + N+R M
Sbjct: 2 AKYIAQIIVLGAQAVGRAFTKALRQEIAASQEAARRAGGGKQGDKSAESNLRTG---MTL 58
Query: 55 PEARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLE 103
EA+QIL + + + + I K Y++LF+ N +K GSFY+QSKV RAKE L+
Sbjct: 59 EEAKQILNIDDPKNVDAITKNYEHLFQVNERSKGGSFYIQSKVFRAKERLD 109
>sp|Q7S6S4|TIM16_NEUCR Mitochondrial import inner membrane translocase subunit tim-16
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pam-16 PE=3 SV=1
Length = 141
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 12/122 (9%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQN--IRRAS--KMMAEPE 56
MA R+I Q++V+GS ++ RA +AY+QA A +S+ AQ+ N RAS M E
Sbjct: 1 MAYRLITQVVVVGSRVLGRAFAEAYKQAAA-SSQYQRAQQKNGNAATGRASLTSGMTLDE 59
Query: 57 ARQILGVTEQ-----SSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLETVYQKK 109
A +IL V + ++ EE+++++ LF+ N K GSFYLQSKV RA+E LE + K
Sbjct: 60 ACKILNVNKPADGTAANMEEVMERFKRLFDANDPEKGGSFYLQSKVVRARERLEAEIKPK 119
Query: 110 HQ 111
+
Sbjct: 120 ME 121
>sp|Q6NTU3|TI16A_XENLA Mitochondrial import inner membrane translocase subunit tim16-A
OS=Xenopus laevis GN=pam16-a PE=2 SV=1
Length = 125
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 17/126 (13%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANA-------SKSGVAQETVQNIRRASKMMAEP 55
A+ +AQ++VMG ++ RA +A RQ A + ++G V ++ S
Sbjct: 2 AKYLAQIVVMGMQVVGRAFTRALRQEFAASKVAAEARGRAGTESAAVSSLSGISLQ---- 57
Query: 56 EARQILGVTEQSSWEEILKKYDNLFEQNAKN--GSFYLQSKVHRAKECLE---TVYQKKH 110
EA+QIL V++ + EEI K Y++LF+ N K GSFYLQSKV RAKE L+ + K H
Sbjct: 58 EAQQILNVSKLTP-EEIQKNYEHLFKVNDKGLGGSFYLQSKVVRAKERLDQEMEIQSKTH 116
Query: 111 QGTEDS 116
+ E++
Sbjct: 117 KPKEET 122
>sp|Q54SV6|TIM16_DICDI Mitochondrial import inner membrane translocase subunit tim16
OS=Dictyostelium discoideum GN=timm16 PE=3 SV=1
Length = 113
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEARQI 60
MAAR+IA+++ ++ R++ AY+QAL A A +++ M+ EAR+I
Sbjct: 1 MAARLIAKIVFTSGTVLVRSIQMAYKQALLQAESGMGAAAGSMDVKSK---MSPIEARKI 57
Query: 61 LGV--TEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLET 104
LG+ E S E+I KKY+ L N GS YLQ K+ AK CL +
Sbjct: 58 LGLENVETVSKEDIDKKYNELLTINDPKDGGSEYLQIKISGAKHCLHS 105
>sp|Q4I375|TIM16_GIBZE Mitochondrial import inner membrane translocase subunit TIM16
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=PAM16 PE=3 SV=1
Length = 138
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKM---MAEPEA 57
MA + + + GS I+ R+ V AY+QA A AS AQ N + + M EA
Sbjct: 1 MAHKFVVTAFLTGSRILGRSFVAAYKQAQA-ASAYQRAQVKAGNTTGGASLSSGMTLDEA 59
Query: 58 RQILGVTE----QSSWEEILKKYDNLFEQNA--KNGSFYLQSKVHRAKECLE 103
+IL V Q++ EE+L +Y LF+ N K GSFYLQSK+ RAKE E
Sbjct: 60 CKILNVKPPAGGQANVEEVLSRYKRLFDANDPQKGGSFYLQSKIVRAKERFE 111
>sp|Q5M995|TI16B_XENLA Mitochondrial import inner membrane translocase subunit tim16-B
OS=Xenopus laevis GN=pam16-b PE=2 SV=1
Length = 122
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 16/111 (14%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKS--------GVAQETVQNIRRASKMMAE 54
A+ +AQ+++MG ++ RA +A RQ A ASK+ G V ++ S
Sbjct: 2 AKYLAQIVLMGVQVVGRAFTRALRQEFA-ASKTAAEARGRAGTESAAVSSLSGISFQ--- 57
Query: 55 PEARQILGVTEQSSWEEILKKYDNLFEQNAK--NGSFYLQSKVHRAKECLE 103
EA+QIL V++ + EEI K Y++LF+ N K GSFYLQSKV RAKE L+
Sbjct: 58 -EAQQILNVSKLTP-EEIQKNYEHLFKVNDKAVGGSFYLQSKVVRAKERLD 106
>sp|Q9CQV1|TIM16_MOUSE Mitochondrial import inner membrane translocase subunit TIM16
OS=Mus musculus GN=Pam16 PE=2 SV=1
Length = 125
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAE---PEARQ 59
A+ +AQ+IVMG ++ RA +A RQ A + + A+ + A+ ++ EA+Q
Sbjct: 2 AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61
Query: 60 ILGVTEQSSWEEILKKYDNLFEQNAKN--GSFYLQSKVHRAKECLE 103
IL V++ S EE+ K Y++LF+ N K+ GSFYLQSKV RAKE L+
Sbjct: 62 ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLD 106
>sp|Q9Y3D7|TIM16_HUMAN Mitochondrial import inner membrane translocase subunit TIM16
OS=Homo sapiens GN=PAM16 PE=1 SV=2
Length = 125
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAE---PEARQ 59
A+ +AQ+IVMG ++ RA +A RQ A + + A+ + A+ ++ EA+Q
Sbjct: 2 AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61
Query: 60 ILGVTEQSSWEEILKKYDNLFEQNAKN--GSFYLQSKVHRAKECLETVYQKKHQGTED 115
IL V++ S EE+ K Y++LF+ N K+ GSFYLQSKV RAKE L+ + K Q ED
Sbjct: 62 ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDE--ELKIQAQED 116
>sp|Q5XGJ0|TIM16_XENTR Mitochondrial import inner membrane translocase subunit tim16
OS=Xenopus tropicalis GN=pam16 PE=2 SV=1
Length = 125
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKS-------GVAQETVQNIRRASKMMAEP 55
A+ +AQ++VMG ++ RA +A RQ A + + G V ++ S
Sbjct: 2 AKYLAQIMVMGMQVVGRAFTRALRQEFAASRAAAEARGRAGTESAAVSSLSGISLQ---- 57
Query: 56 EARQILGVTEQSSWEEILKKYDNLFEQNAK--NGSFYLQSKVHRAKECLE 103
EA+QIL V++ + EEI K Y++LF+ N K GSFYLQSKV RAKE L+
Sbjct: 58 EAQQILNVSKLTP-EEIQKNYEHLFKVNDKEVGGSFYLQSKVVRAKERLD 106
>sp|Q5B187|TIM16_EMENI Mitochondrial import inner membrane translocase subunit tim16
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pam16 PE=3 SV=1
Length = 135
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEARQI 60
MA RI+ Q++V G+ + RA +AY+QA A ASK +S + + EA +I
Sbjct: 1 MAHRIVTQVVVTGARVFGRAFAEAYKQASA-ASKYQQKTGKSAGGSSSSGITLD-EACKI 58
Query: 61 LGVTE----QSSWEEILKKYDNLFEQNA--KNGSFYLQSKVHRAKECLE 103
L V +++ E++++++ LF+ N K GSFYLQSK+ RA+E +E
Sbjct: 59 LNVKPPQAGETNLEQVMERFKKLFDLNDPQKGGSFYLQSKILRARERIE 107
>sp|P42949|TIM16_YEAST Mitochondrial import inner membrane translocase subunit TIM16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PAM16 PE=1 SV=1
Length = 149
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRAS-KMMAEPEARQ 59
MA R Q+I+ G+ + +A +AYRQA + + K G + + + + E+ +
Sbjct: 1 MAHRAFIQVIITGTQVFGKAFAEAYRQAASQSVKQGATNASRRGTGKGEYGGITLDESCK 60
Query: 60 ILGVTEQS---SWEEILKKYDNLFEQNA--KNGSFYLQSKVHRAKECLE 103
IL + E + ++I +++ LFE N K GSFYLQSKV+RA E L+
Sbjct: 61 ILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLK 109
>sp|Q6PBL0|TIM16_DANRE Mitochondrial import inner membrane translocase subunit tim16
OS=Danio rerio GN=pam16 PE=2 SV=1
Length = 129
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 36/121 (29%)
Query: 3 ARIIAQLIVMGSGIMARAVV------------------QAYRQALANASKSGVAQETVQN 44
A+ +AQ+IVMG+ ++ RA QA RQ+ A +S +G
Sbjct: 2 AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTG-------- 53
Query: 45 IRRASKMMAEPEARQILGVTEQSSWEEILKKYDNLFEQNAK--NGSFYLQSKVHRAKECL 102
M EA+QIL ++ + EEI K Y++LF+ N K GSFY+QSKV RAKE L
Sbjct: 54 -------MTLQEAQQILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERL 105
Query: 103 E 103
+
Sbjct: 106 D 106
>sp|Q6BXP3|TIM16_DEBHA Mitochondrial import inner membrane translocase subunit TIM16
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=PAM16 PE=3 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQ---ALANASKSGVAQETVQNIRRASKMMAEPEA 57
MA R++ +I G+ + RA +AY+Q A A+ + G A+ T + + EA
Sbjct: 1 MAHRLLVNVIFTGASVFGRAFTEAYKQAAKATASTPQGGAAKST------SVGGIPTDEA 54
Query: 58 RQILGVTEQS-SWEEILKKYDNLFEQNAKN--GSFYLQSKVHRAKECL--ETVYQKKHQG 112
+IL + + S +I +KY LF+ N+K+ SFYLQSKV+ A + L E Y K +
Sbjct: 55 LKILDLKKTDLSVAKIDEKYAYLFDVNSKDKGNSFYLQSKVYYAMDSLRKELDYLDKLKK 114
Query: 113 TED 115
T+D
Sbjct: 115 TKD 117
>sp|Q754J4|TIM16_ASHGO Mitochondrial import inner membrane translocase subunit TIM16
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=PAM16 PE=3 SV=2
Length = 136
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAE------ 54
MA R++ Q+I G+ + RA +AY+Q A +K G T R M E
Sbjct: 1 MAHRVLVQVIFTGARVFGRAFTEAYKQTAAQMAKQG----TSSAARSQGGMTNEYGGITL 56
Query: 55 PEARQILGVTEQS---SWEEILKKYDNLFEQNA--KNGSFYLQSKVHRAKECLE 103
E+ +IL + E + +++ +++ LF+ N K GSFYLQSK++RA E L+
Sbjct: 57 DESCKILNIEENGPEMNLDKVEQRFKYLFDINDKEKGGSFYLQSKIYRAAERLK 110
>sp|Q6C331|TIM16_YARLI Mitochondrial import inner membrane translocase subunit TIM16
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=PAM16 PE=3 SV=1
Length = 147
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 20/120 (16%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYR-----QALANASKSGVAQETVQNIRRASKMMAEP 55
MA R+I Q++V G+ + A+A QAY+ QA + SKS ++ + A K++
Sbjct: 1 MAHRLIYQVVVTGTQVFAKAFTQAYKQAATAQAASKTSKSAASKFGGLQLDEACKILDVD 60
Query: 56 EA------------RQILGVTE-QSSWEEILKKYDNLFEQNA--KNGSFYLQSKVHRAKE 100
E ++ + E +S +I KK+ +L+ N+ K+GSFYLQSKV+RA E
Sbjct: 61 ETALDKVVAELNKKHKLEDIAESESVLAQIDKKFTHLYTVNSEHKSGSFYLQSKVYRAME 120
>sp|Q6EIX2|TIM16_RAT Mitochondrial import inner membrane translocase subunit TIM16
OS=Rattus norvegicus GN=Magmas-ps1 PE=3 SV=1
Length = 124
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 3 ARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAE---PEARQ 59
A+ + Q+IVMG ++ R +A RQ A + + A+ + A+ ++ EA+Q
Sbjct: 2 AKYLTQIIVMGVQVVGRDFAKALRQEFAASQAAADARGHAGHQSAAASNLSGLSLQEAQQ 61
Query: 60 ILGVTEQSSWEEILKKYDNLFEQNAKN--GSFYLQSKVHRAKECLE 103
IL +++ S E ++ Y++LF+ N K+ SFYLQSKV RAKE L+
Sbjct: 62 ILNISKLSPEE--VQNYEHLFKVNDKSVGDSFYLQSKVVRAKERLD 105
>sp|Q59ZW9|TIM16_CANAL Mitochondrial import inner membrane translocase subunit TIM16
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=PAM16 PE=3 SV=1
Length = 121
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEARQI 60
MA R++ +I G+ + RA +AYRQA ++ + + ++ + EA +I
Sbjct: 1 MAHRLLVNVIFTGASVFGRAFTEAYRQAAKASAAGAAGRPAKAS---SAGGIPVEEAMKI 57
Query: 61 LGVTE-QSSWEEILKKYDNLFEQNAK--NGSFYLQSKVHRAKECL 102
L + + + S +++ +KY+ LF N+K SFYLQSKV+ A + L
Sbjct: 58 LDLEKSELSLDKVEEKYEYLFNVNSKEQGNSFYLQSKVYYAMDTL 102
>sp|Q60RS2|TIM16_CAEBR Mitochondrial import inner membrane translocase subunit tim-16
OS=Caenorhabditis briggsae GN=tim-16 PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 40 ETVQNIRRASKM-MAEPEARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVH 96
ET +N +K+ ++ E+ QIL V + E++ K Y++LF N AK G+FYLQSKV+
Sbjct: 49 ETKENANANAKLGISLEESLQILNVKTPLNREDVEKHYEHLFAINDKAKGGTFYLQSKVY 108
Query: 97 RAKECLETVYQKKHQGTEDS 116
RAKE ++ + Q +E++
Sbjct: 109 RAKERIDEELSRLEQKSEEN 128
>sp|O62250|TIM16_CAEEL Mitochondrial import inner membrane translocase subunit tim-16
OS=Caenorhabditis elegans GN=tim-16 PE=3 SV=1
Length = 136
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYR-------QALAN--ASKSGVAQETVQNIRRASKM 51
M R ++ + +A+A+ +A R QA A AS A ET +N +K+
Sbjct: 1 MPWRTALKVALAAGEAVAKALTRAVRDEIKQTQQAAARHAASTGQSASETRENANSNAKL 60
Query: 52 -MAEPEARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLETVY 106
++ E+ QIL V + EE+ K Y++LF N +K G+ YLQSKV RAKE ++ +
Sbjct: 61 GISLEESLQILNVKTPLNREEVEKHYEHLFNINDKSKGGTLYLQSKVFRAKERIDEEF 118
>sp|Q6CK35|TIM16_KLULA Mitochondrial import inner membrane translocase subunit TIM16
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAM16
PE=3 SV=1
Length = 139
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAE------ 54
MA R Q+I G+ + RA ++YRQA A + N R AE
Sbjct: 1 MAHRAFIQVIFTGAQVFGRAFAESYRQAAA------QTAKQTANASRGRGASAEYGGITL 54
Query: 55 PEARQILGV-TEQS-SWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECL 102
E+ +IL + EQ + ++I +++ LFE N K GSFYLQSK++RA E L
Sbjct: 55 DESSKILNIENEQDMNLDKINERFKYLFEINDKEKGGSFYLQSKIYRAAERL 106
>sp|Q54QN1|TIM14_DICDI Mitochondrial import inner membrane translocase subunit TIM14
OS=Dictyostelium discoideum GN=dnajc19 PE=3 SV=1
Length = 113
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 1 MAARIIAQLIVMGSGIMARAVVQAY-----RQALANASKSGVAQETVQNIRRASKMMAEP 55
MA II + G +R +++ +Q S G ET+++ M
Sbjct: 1 MATPIIVGATIAGIAYSSRFLIRVIQRAKSKQLFEMVSTPGFTVETIED--GFENKMTPA 58
Query: 56 EARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLET 104
EA ILG+ E+S+ EEI ++ L +N K GS YL +K++ A+ L +
Sbjct: 59 EAANILGLKEESTKEEIKIRHKLLMIKNHPDKGGSSYLATKINEARNVLSS 109
>sp|Q6FT88|TIM16_CANGA Mitochondrial import inner membrane translocase subunit TIM16
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=PAM16 PE=3 SV=1
Length = 146
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 70 EEILKKYDNLFEQNAK--NGSFYLQSKVHRAKECL 102
+++ +++D LF N K GSFYLQSK++RA E L
Sbjct: 78 DKVNQRFDYLFNINDKEKGGSFYLQSKIYRASERL 112
>sp|Q8CNB2|PTXBC_STAES PTS system EIIBC component SE_1890 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1890 PE=3 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 10 IVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEA----RQILGVTE 65
+V+G GI+ + + +A+ S + +A+ET +N ++ K AE A +Q +
Sbjct: 63 VVVGPGIVNKVA-----KLMADQSGATLAEETTEN--QSYKSQAEKRAYEHKKQFQSQRK 115
Query: 66 QSSWEEILKKYDNLF 80
QS W ++LK N+F
Sbjct: 116 QSKWNKVLKSIANIF 130
>sp|Q5HLT2|PTXBC_STAEQ PTS system EIIBC component SERP1900 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP1900 PE=3 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 10 IVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEA----RQILGVTE 65
+V+G GI+ + + +A+ S + +A+ET +N ++ K AE A +Q +
Sbjct: 63 VVVGPGIVNKVA-----KLMADQSGATLAEETTEN--QSYKSQAEKRAYEHKKQFQSQRK 115
Query: 66 QSSWEEILKKYDNLF 80
QS W ++LK N+F
Sbjct: 116 QSKWNKVLKSIANIF 130
>sp|P0A3F3|GLGA1_RHIRD Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1
Length = 480
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 10 IVMGSGIMARAVVQAYRQALANASKSGVAQETV------QNIRRASKMMAEPE---ARQI 60
+V +G +A V+ A ALA+ + +GV V Q IRR + +P+ Q
Sbjct: 393 VVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452
Query: 61 LGVTEQSSWEEILKKYDNLFEQNAKNG 87
LG+ SWE+ Y L+ Q G
Sbjct: 453 LGMKSDVSWEKSAGLYAALYSQLISKG 479
>sp|P0A3F2|GLGA1_AGRT5 Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=glgA1 PE=3 SV=1
Length = 480
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 10 IVMGSGIMARAVVQAYRQALANASKSGVAQETV------QNIRRASKMMAEPE---ARQI 60
+V +G +A V+ A ALA+ + +GV V Q IRR + +P+ Q
Sbjct: 393 VVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452
Query: 61 LGVTEQSSWEEILKKYDNLFEQNAKNG 87
LG+ SWE+ Y L+ Q G
Sbjct: 453 LGMKSDVSWEKSAGLYAALYSQLISKG 479
>sp|Q9Y5T4|DJC15_HUMAN DnaJ homolog subfamily C member 15 OS=Homo sapiens GN=DNAJC15 PE=1
SV=2
Length = 150
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 4 RIIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRAS----------KMMA 53
R++ LI +G G+ A A Y + + V ET + I S + M+
Sbjct: 35 RLVRSLIAVGLGVAALAFAGRYAFRIWKPLEQ-VITETAKKISTPSFSSYYKGGFEQKMS 93
Query: 54 EPEARQILGVTEQSSWEEILKKYDN--LFEQNAKNGSFYLQSKVHRAKECLET 104
EA ILGV+ + +I + + K GS Y+ +K++ AK+ LET
Sbjct: 94 RREAGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLET 146
>sp|Q5RCP4|DJC15_PONAB DnaJ homolog subfamily C member 15 OS=Pongo abelii GN=DNAJC15 PE=2
SV=1
Length = 150
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 5 IIAQLIVMGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRAS----------KMMAE 54
++ LI +G G+ A A Y + + V ET + I S K M+
Sbjct: 36 LVRSLIAVGLGVAAFAFAGRYAFRIWKPLEQ-VITETAKKISTPSLSSYYKGGFEKKMSR 94
Query: 55 PEARQILGVTEQSSWEEILKKYDN--LFEQNAKNGSFYLQSKVHRAKECLET 104
EA ILGV+ + +I + + K GS Y+ +K++ AK+ LET
Sbjct: 95 REAGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLET 146
>sp|Q78YY6|DJC15_MOUSE DnaJ homolog subfamily C member 15 OS=Mus musculus GN=Dnajc15 PE=2
SV=1
Length = 149
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 52 MAEPEARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLE 103
M++ EA ILGV+ + +I + + N K GS YL SK++ AK+ LE
Sbjct: 90 MSKREASLILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLE 143
>sp|Q9CQV7|TIM14_MOUSE Mitochondrial import inner membrane translocase subunit TIM14
OS=Mus musculus GN=Dnajc19 PE=2 SV=3
Length = 116
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 1 MAARIIA-QLIVMGSGIMARAVVQA-------YRQALANASKSGVAQETVQNIRRASKMM 52
MA+ ++A L + +G R V+QA +Q + KS A M
Sbjct: 1 MASTVVAVGLTIAAAGFAGRYVLQAMKHVEPQVKQVFQSLPKS--AFGGGYYRGGFEPKM 58
Query: 53 AEPEARQILGVTEQSSWEEILKKYDN--LFEQNAKNGSFYLQSKVHRAKECLE 103
+ EA ILGV+ ++ +I + L K GS Y+ +K++ AK+ LE
Sbjct: 59 TKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111
>sp|Q6AA78|ARCA_PROAC Arginine deiminase OS=Propionibacterium acnes (strain KPA171202 /
DSM 16379) GN=arcA PE=3 SV=1
Length = 414
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 60 ILGVTEQSSWEEILKKYDNLFEQNAKNGSFYLQSKVHRAKECLETVY 106
++G+ E+SSW+ I + +LF QNA RA L+TV+
Sbjct: 234 LIGMGERSSWQAITQVARSLFAQNAARRMVVAAMAPDRASMHLDTVF 280
>sp|C4R331|RRG9_PICPG Required for respiratory growth protein 9, mitochondrial
OS=Komagataella pastoris (strain GS115 / ATCC 20864)
GN=RRG9 PE=3 SV=1
Length = 218
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 20/97 (20%)
Query: 33 SKSGVAQETVQNIRRASKMMAE-------------PEA-RQILGVTEQSSWEEILKKYDN 78
K ++++T++ IR + + E PEA R+IL +S WE L++ +N
Sbjct: 112 PKKKLSRDTIEGIRLLKEKLPELKADYFAEQFQVSPEAVRRIL----KSRWEPTLEEREN 167
Query: 79 LFEQNAKNGSFYLQSKVHRAKECLETVYQKKHQGTED 115
+ E+ + G +LQ K+ ++ L+TV +K + +D
Sbjct: 168 IEERWKRRGVKHLQLKI--KEQLLKTVKEKGEKSEDD 202
>sp|A3MWR8|APGM_PYRCJ 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1)
GN=apgM PE=3 SV=1
Length = 411
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 12 MGSGIMARAVVQAYRQALANASKSGVAQETVQNIRRASKMMAEPEARQILGVTEQSSWEE 71
+G+GI R A+R LA SGV + RRA + +A E R + V + +E
Sbjct: 79 LGAGIELRPGDVAFRTNLATVDSSGVVID-----RRAGRYIAPEETRAVEEVMAKIG-DE 132
Query: 72 ILKKY 76
+ K+Y
Sbjct: 133 VAKRY 137
>sp|Q5RF34|TIM14_PONAB Mitochondrial import inner membrane translocase subunit TIM14
OS=Pongo abelii GN=DNAJC19 PE=3 SV=3
Length = 116
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 1 MAARIIA-QLIVMGSGIMARAVVQAYR----------QALANASKSGVAQETVQNIRRAS 49
MA+ ++A L + +G R V+QA + Q+L ++ SG R
Sbjct: 1 MASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSG-------GYYRGG 53
Query: 50 --KMMAEPEARQILGVTEQSSWEEILKKYDN--LFEQNAKNGSFYLQSKVHRAKECLE 103
M + EA ILGV+ ++ +I + L K GS Y+ +K++ AK+ LE
Sbjct: 54 FEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111
>sp|Q96DA6|TIM14_HUMAN Mitochondrial import inner membrane translocase subunit TIM14
OS=Homo sapiens GN=DNAJC19 PE=1 SV=3
Length = 116
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 1 MAARIIA-QLIVMGSGIMARAVVQAYR----------QALANASKSGVAQETVQNIRRAS 49
MA+ ++A L + +G R V+QA + Q+L ++ SG R
Sbjct: 1 MASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSG-------GYYRGG 53
Query: 50 --KMMAEPEARQILGVTEQSSWEEILKKYDN--LFEQNAKNGSFYLQSKVHRAKECLE 103
M + EA ILGV+ ++ +I + L K GS Y+ +K++ AK+ LE
Sbjct: 54 FEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111
>sp|Q07914|TIM14_YEAST Mitochondrial import inner membrane translocase subunit TIM14
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PAM18 PE=1 SV=1
Length = 168
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 52 MAEPEARQILGVTEQSSWEEILKKYDN---LFEQNAKNGSFYLQSKVHRAKECLE 103
M EA QIL +TE + ++ LK+ L K GS +L +K++ AK+ LE
Sbjct: 108 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLE 162
>sp|Q8CWP9|DIV4A_STRR6 Cell division protein DivIVA OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=divIVA PE=1 SV=2
Length = 262
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 26 RQALANASKSGVAQETVQNIRRASKMMAEPEARQILGVTEQSSWEEILK 74
RQA NA K V E ++N R + L + E S WE+IL+
Sbjct: 116 RQATDNAKKVAVETEELKNKSRVFHQRLKSTIESQLAIVESSDWEDILR 164
>sp|Q921G8|GCP2_MOUSE Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2
SV=2
Length = 905
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 70 EEILKKYDNLFEQNAKNGS--FYLQSKVHRAKECLETVYQKKHQGTE 114
E+ LKKYD L +N +N YL SK+ KE L+ + Q + E
Sbjct: 61 EDFLKKYDELKSKNTRNLDPLVYLLSKLTEDKETLQFLQQNAKERAE 107
>sp|Q5R5J6|GCP2_PONAB Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2
SV=1
Length = 902
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 70 EEILKKYDNLFEQNAKNGS--FYLQSKVHRAKECLETVYQ 107
E+ LKKYD L +N +N YL SK+ KE L+ + Q
Sbjct: 61 EDFLKKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQ 100
>sp|Q9BSJ2|GCP2_HUMAN Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1
SV=2
Length = 902
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 70 EEILKKYDNLFEQNAKNGS--FYLQSKVHRAKECLETVYQ 107
E+ LKKYD L +N +N YL SK+ KE L+ + Q
Sbjct: 61 EDFLKKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQ 100
>sp|A7GYY9|PURL_CAMC5 Phosphoribosylformylglycinamidine synthase 2 OS=Campylobacter
curvus (strain 525.92) GN=purL PE=3 SV=1
Length = 729
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 32 ASKSGVAQETVQNIRRASKMMAEPEARQILGVTEQSSWEEILKKYDNLFEQNAKNGS--F 89
A SG+ E ++ +A+ + E +R ++GVT ++ + E+ K+ FE+ G F
Sbjct: 642 ACISGIGAECKFDVAQANFIFDESFSRALVGVTSEAKFSELAAKFGVKFEKIGVTGGDKF 701
Query: 90 YLQSKVHRAKECLETVYQK 108
L KE E + +
Sbjct: 702 RLNEIDENLKEISEIYFNE 720
>sp|Q6DDA1|DJC15_XENTR DnaJ homolog subfamily C member 15 OS=Xenopus tropicalis GN=dnajc15
PE=2 SV=1
Length = 149
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 56 EARQILGVTEQSSWEEILKKYDNLFEQN--AKNGSFYLQSKVHRAKECLETV 105
EA ILGV+ +S +I + + N K GS Y+ K++ AK+ LE+
Sbjct: 95 EASLILGVSPSASKSKIRAAHRKIMILNHPDKGGSPYMAMKINEAKDLLEST 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.124 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,656,057
Number of Sequences: 539616
Number of extensions: 1128186
Number of successful extensions: 4919
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4858
Number of HSP's gapped (non-prelim): 57
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)