BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033577
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L9P8|RLF33_ARATH Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1
Length = 116
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 83/111 (74%), Gaps = 13/111 (11%)
Query: 8 LLCVYLFLAALMMDSSTVVDAGVDQRLSWVPAKARCQGSMAEC---MADEEFGMDSEINR 64
+L V+ AA+ SS +VP +++C G++AEC A+EEF MDSEINR
Sbjct: 15 ILTVHFLFAAVTSQSSG----------DFVPIESKCNGTIAECSLSTAEEEFEMDSEINR 64
Query: 65 RILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
RILATTKYISYGAL+R++VPCS+RGASYYNC GAQANPYSRGCSAITRCR
Sbjct: 65 RILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115
>sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1
Length = 120
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 6/117 (5%)
Query: 6 AFLLCVYLFLAALMMDSSTVVDAGVDQRLSWVP------AKARCQGSMAECMADEEFGMD 59
+F L + L + + + SS V AG L V + C GS+AEC+ EE MD
Sbjct: 4 SFTLFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMD 63
Query: 60 SEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116
SEINRRILATTKYISY +L+R+SVPCS+RGASYYNC GAQANPYSRGCS I RCRS
Sbjct: 64 SEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1
Length = 115
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 85/120 (70%), Gaps = 9/120 (7%)
Query: 1 MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV-PAKAR--CQGSMAECMADEEFG 57
M +LCV + A + + D+G WV PA++ C+GS+ EC+A+EE
Sbjct: 1 MGVPSGLILCV--LIGAFFISMAAAGDSGA---YDWVMPARSGGGCKGSIGECIAEEEEF 55
Query: 58 -MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116
+DSE NRRILAT KYISYGALQ++SVPCS+RGASYYNC GAQANPYSRGCSAITRCRS
Sbjct: 56 ELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115
>sp|Q9LUS7|RLF23_ARATH Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23
PE=1 SV=1
Length = 138
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 80/131 (61%), Gaps = 22/131 (16%)
Query: 2 AKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWVPAKARCQGSMAECMADEEFG---- 57
A A LL + + ++ + S + AG + P + C+G++AEC G
Sbjct: 11 AAIFAILLILAVHNWSVAVSSQSTEFAG-----DFPPFETECRGTIAECSVSAALGDGGD 65
Query: 58 -------------MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPY 104
MDSEINRRILAT +YISYGAL+R+++PCS+RGASYYNC GAQANPY
Sbjct: 66 LFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPY 125
Query: 105 SRGCSAITRCR 115
SRGCSAITRCR
Sbjct: 126 SRGCSAITRCR 136
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 58 MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
DS+I+RRILA KYISYGA++R+SVPCS+RGASYYNC GAQANPYSRGCS ITRCR
Sbjct: 61 FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118
>sp|Q6NME6|RLF19_ARATH Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1
Length = 110
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 44 QGSMAECMADEEFGMDSEINRRILATTK-YISYGALQRDSVPCSQRGASYYNCHAGAQAN 102
QG + E + ++ MDSE NRR LA + YISYGAL++++VPCS+RG SYY+C +AN
Sbjct: 35 QGCIGE-DGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRAN 93
Query: 103 PYSRGCSAITRC 114
PY RGCS IT C
Sbjct: 94 PYRRGCSVITHC 105
>sp|Q9FZA0|RLF4_ARATH Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1
Length = 110
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 44 QGSMAECMADEEFG--MDSEINRRILAT-TKYISYGALQRDSVPCSQRGASYYNCHAGAQ 100
QG + E D+E MDSE NRR LA +YI Y AL++++VPCS+RG SYY+C +
Sbjct: 35 QGCIGE---DDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRR 91
Query: 101 ANPYSRGCSAITRC 114
NPY RGCSAIT C
Sbjct: 92 NNPYRRGCSAITHC 105
>sp|Q2HIM9|RLF31_ARATH Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1
Length = 113
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 51 MADEEFGMDSEINRRIL-ATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCS 109
+ ++E M +EI+RR+L A +YI Y L+RD VPC + GASYY+C +G QAN YSRGC
Sbjct: 41 IGEDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSG-QANSYSRGCD 99
Query: 110 AITRC 114
ITRC
Sbjct: 100 TITRC 104
>sp|Q9LK37|RLF24_ARATH Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1
Length = 118
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 60 SEINRRILATTK-YISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRC 114
SEI+RR++ K YISY L+RD VPC + GASYY C +G QAN Y+RGCS ITRC
Sbjct: 55 SEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSG-QANAYNRGCSVITRC 109
>sp|Q9FHA6|RLF34_ARATH Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1
Length = 129
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 22 SSTVVDAGVDQRLSWVPAKARCQGSMAECMADEEFGMDSEINRRILATTKYISYGALQRD 81
S T++ G D +S G + + +E+ G+ + T YISYGAL +
Sbjct: 31 SLTLLPDGFDWPISHSDEFDIIDGEESFEVTEEDDGVTDRRSLYWRRTKYYISYGALSAN 90
Query: 82 SVPCSQR-GASYY--NC-HAGAQANPYSRGCSAITRCR 115
VPC R G SYY NC A +PYSRGCS+ITRCR
Sbjct: 91 RVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCR 128
>sp|O23262|RLF32_ARATH Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1
Length = 117
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 43 CQGSMAEC---MADEEFG--MDSEINRRILATTKY-ISYGALQRDSVPC--SQRGASYYN 94
C GS+AEC + EE M+S ++R+ + +SYGAL+R+ C +RG SY
Sbjct: 34 CNGSVAECSSMVETEEMSVIMESWSSQRLTEEQAHKLSYGALRRNQPACDGGKRGESYST 93
Query: 95 CHAGAQANPYSRGCSAITRC 114
+NPYSRGCS RC
Sbjct: 94 QCLPPPSNPYSRGCSKHYRC 113
>sp|A8MQI8|RLF5_ARATH Protein RALF-like 5 OS=Arabidopsis thaliana GN=RALFL5 PE=2 SV=1
Length = 89
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 71 KYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
+YI Y Q+ PC+ R + +C+ ANPY RGC+ I+RCR
Sbjct: 27 RYIEYPPWQKH--PCNPRFPTP-DCYKRTPANPYRRGCTCISRCR 68
>sp|Q9SIU6|RLF14_ARATH Protein RALF-like 14 OS=Arabidopsis thaliana GN=RALFL14 PE=3 SV=1
Length = 101
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 3 KTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWVPAKARCQGSMAECMADEEFGMDSEI 62
K L F + + + L +++ S T+ DQ +C + + + G+D
Sbjct: 2 KLLIFAVIISVVLFPVLVSSRTI---KCDQ------LSGKCINGEEKEIMNMRLGLDVS- 51
Query: 63 NRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRC 114
+RRIL ++YISY AL+++ +P ++RG + NPY R C + C
Sbjct: 52 SRRILQASRYISYEALKKN-LPDNRRG------EPDQRDNPYRRSCDVHSHC 96
>sp|Q3ECL0|RLF9_ARATH Protein RALF-like 9 OS=Arabidopsis thaliana GN=RALFL9 PE=3 SV=1
Length = 75
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 70 TKYISYGALQR--DSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
T+YI+Y A+ R +V C + ++ N +ANPY RGC I RCR
Sbjct: 29 TRYITYPAIDRGDHAVHCDK---AHPNTCKKKEANPYQRGCEKINRCR 73
>sp|Q9LDU1|RLF28_ARATH Protein RALF-like 28 OS=Arabidopsis thaliana GN=RALFL28 PE=2 SV=1
Length = 85
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 63 NRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116
N +A I Y + R Q G + NC ANPY RGC RCR
Sbjct: 24 NNMNVAVANEIGYPGMGRGD---RQPGCDHGNCPPDQPANPYHRGCEKSKRCRG 74
>sp|Q0V822|RLF26_ARATH Protein RALF-like 26 OS=Arabidopsis thaliana GN=RALFL26 PE=3 SV=1
Length = 76
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 71 KYISYGALQRDSVPCSQRGASYYNCHAGAQA--NPYSRGCSAITRCR 115
KY++ G L R P G +N H + + YSRGCS ITRCR
Sbjct: 27 KYLNPGVLDRCRGPNPPAGCHPHNSHHKPRVPVHNYSRGCSRITRCR 73
>sp|O49320|RLF18_ARATH Protein RALF-like 18 OS=Arabidopsis thaliana GN=RALFL18 PE=3 SV=1
Length = 103
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 13 LFLAALMMDSSTVVDAGVDQRLSWVPAKARCQGSMAECMADEEFGMDS--EINRRILATT 70
L + A+M+ S+ ++ A V + P K C M +E M S +++ RIL
Sbjct: 7 LLIIAVMIISAALLPALV---VGSRPVK--CDNCMDGGEKEEIMKMSSGVDVSHRILQAK 61
Query: 71 KYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRC 114
++I Y AL+++ +P G N Y RGCSA T C
Sbjct: 62 RFIDYEALKKN-LPAKPDG------KPDKPDNKYRRGCSAATGC 98
>sp|Q1ECR9|RLF8_ARATH Protein RALF-like 8 OS=Arabidopsis thaliana GN=RALFL8 PE=2 SV=1
Length = 82
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 65 RILATTKYISYGALQR--DSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
++ A+ +YI+Y A+ R +V C + ++ N QANPY RGC + C
Sbjct: 25 KVEASVRYITYPAIDRGDHAVHCDK---AHPNTCKKKQANPYRRGCGVLEGCH 74
>sp|A8MRF9|RLF21_ARATH Protein RALF-like 21 OS=Arabidopsis thaliana GN=RALFL21 PE=2 SV=1
Length = 105
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 67 LATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
+ K I Y L+ D +PC + NPY RGCS I RCR
Sbjct: 27 MTVGKVIGYPGLKPD-LPCDHHRYPSACAPSEQPVNPYRRGCSKIHRCR 74
>sp|A8MQM7|RLF15_ARATH Protein RALF-like 15 OS=Arabidopsis thaliana GN=RALFL15 PE=3 SV=1
Length = 79
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 67 LATTKYISYGALQR--DSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
+ T+YISY + ++ C + ++ N ANPY RGC I RCR
Sbjct: 26 VEATRYISYRGMNHGDHAIHCDK---AHPNTCKKQVANPYRRGCGTIERCR 73
>sp|A8MQ92|RLF2_ARATH Protein RALF-like 2 OS=Arabidopsis thaliana GN=RALFL2 PE=3 SV=1
Length = 97
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 71 KYISYGALQRDSVPCSQRGASYYNCHAGAQA-NPYSRGCSAITRC 114
K I Y A+ RD RG S + Q PY RGC ITRC
Sbjct: 27 KVIGYPAIGRDGA----RGCSPKDPSCPQQPEKPYKRGCEKITRC 67
>sp|A7REE5|RLF3_ARATH Protein RALF-like 3 OS=Arabidopsis thaliana GN=RALFL3 PE=3 SV=1
Length = 90
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 95 CHAGAQANPYSRGCSAITRCR 115
C ANPY RGC ITRC+
Sbjct: 67 CLPKQPANPYRRGCLKITRCQ 87
>sp|A8MRM1|RLF16_ARATH Protein RALF-like 16 OS=Arabidopsis thaliana GN=RALFL16 PE=3 SV=1
Length = 95
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 73 ISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRC 114
+ YG+++ D +P G N N Y RGC ITRC
Sbjct: 32 LGYGSIKGDRIPAC--GYKNPNSCVKQPVNHYHRGCEKITRC 71
>sp|Q5XF90|AT134_MOUSE Probable cation-transporting ATPase 13A4 OS=Mus musculus GN=Atp13a4
PE=2 SV=1
Length = 1193
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 39 AKARCQGSMAECMADEEFGMDSEINRRILATTKYISYGALQR-DSVPCSQRGASYYNCHA 97
A+ R + C++ + + ++N T ++ G L VPC Q G + A
Sbjct: 458 AQRRLKKKGIFCISPQRINVCGQLNLVCFDKTGTLTRGGLDPWGVVPCDQNGFQAVHSFA 517
Query: 98 GAQANPYSRGCSAITRCRS 116
+A P C+A+ C S
Sbjct: 518 SGKALPQGPLCAAMASCHS 536
>sp|A8MRD4|RLF7_ARATH Protein RALF-like 7 OS=Arabidopsis thaliana GN=RALFL7 PE=3 SV=1
Length = 81
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 71 KYISYGALQRDSVP-CSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
K I+Y L +D++P C+ + C AN Y RGC TRC
Sbjct: 31 KQINYKDLIKDTIPGCTSKNPK--EC-VKVPANTYHRGCEISTRCH 73
>sp|A3CLF8|GATA_STRSV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus
sanguinis (strain SK36) GN=gatA PE=3 SV=1
Length = 488
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 57 GMDSEINRRILATTKYI-SYGALQRD-SVPCSQRGASYYNCHAGAQAN 102
G+DS++ ILA K++ S GA+ + S+P S+ G + Y A ++A+
Sbjct: 269 GIDSKVKETILAAAKHLESLGAIVEEVSLPHSKYGVAVYYIIASSEAS 316
>sp|A8AVE2|GATA_STRGC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus
gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
V288) GN=gatA PE=3 SV=1
Length = 488
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 57 GMDSEINRRILATTKYI-SYGALQRD-SVPCSQRGASYYNCHAGAQAN 102
G+DS++ ILA K++ S GA+ + S+P S+ G + Y A ++A+
Sbjct: 269 GIDSKVKETILAAAKHLESLGAIVEEVSLPHSKYGVAVYYIIASSEAS 316
>sp|A8MR00|RLF36_ARATH Protein RALF-like 36 OS=Arabidopsis thaliana GN=At2g32885 PE=3 SV=1
Length = 72
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 66 ILATTKYISYGA-LQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCR 115
+++TT+ S GA R+ +P S C ANPY GC A RCR
Sbjct: 21 VMSTTEANSIGAPAMREDLPKGCAPGSSAGCKM-QPANPYKPGCEASQRCR 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.131 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,099,502
Number of Sequences: 539616
Number of extensions: 1280644
Number of successful extensions: 2958
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2924
Number of HSP's gapped (non-prelim): 42
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)