BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033580
(116 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 128 bits (322), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 82/107 (76%)
Query: 4 FEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLAS 63
+ED+LPVMA+K+ E ++ELC GF LL D + +IT ESL+ N+ +LG++ ++ +
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 64 MVKEGDLDGDGALNQMEFCVLMFRLSPQLMEESQLWLREALNEELNN 110
MV+EGDLDGDGALNQ EFCVLM RLSP++ME+++ WL +AL +EL N
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCN 128
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DFE+ L +M K+G E+ F+L D G I+ ++LK A LG +++TD++L
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEEL 119
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFRLS 89
M+ E D DGDG +N+ EF +M + S
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIMKKTS 147
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 1 MVDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDK 60
++ ++D VM +K+ ++E+ FQL D G I+ ++L+ A LG + LTD++
Sbjct: 75 LMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEE 133
Query: 61 LASMVKEGDLDGDGALNQMEFCVL 84
L +M++E DLDGDG +N+ EF +
Sbjct: 134 LRAMIEEFDLDGDGEINENEFIAI 157
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F D L VM K+ + E+ F+L D G I+ ++LK A LG ++LTD++L
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEEL 59
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFRLS 89
M+ E D DGDG +++ EF +M + S
Sbjct: 60 QEMIDEADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F D L VM K+ + E+ F+L D G I+ ++LK A LG ++LTD++L
Sbjct: 59 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEEL 117
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M+ E D DGDG +++ EF +M
Sbjct: 118 QEMIDEADRDGDGEVSEQEFLRIM 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ + EL F++ G+I+ L+ LG + LTDD++
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGHINYEEFVRMM 145
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 78 QMEFCVLMFRLSPQLMEESQL 98
EF LM R + E +L
Sbjct: 65 FPEFLSLMARKMKEQDSEEEL 85
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ + EL F++ G+I+ L+ LG + LTDD++
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGHINYEEFVRMM 145
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 78 QMEFCVLMFRLSPQLMEESQL 98
EF LM R + E +L
Sbjct: 65 FPEFLSLMARKMKEQDSEEEL 85
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DFE+ L +M K+G E+ F+L D G IT + L+ A LG ++LT+++L
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEEL 139
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFRLS 89
M+ E D + D +++ EF +M + S
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMKKTS 167
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 4 FEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLAS 63
++D V +K+ ++E+ FQL D G I+ ++L+ A LG + LTD++L +
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 64 MVKEGDLDGDGALNQMEFCVL 84
++E DLDGDG +N+ EF +
Sbjct: 137 XIEEFDLDGDGEINENEFIAI 157
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F++ L +MA K+ EL F++ G I+ L+ LG + LTD+++
Sbjct: 63 IEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M+KE DLDGDG +N EF +M
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMM 145
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD L E +++ F L G IT E L L Q+ T+++L M+ E D D
Sbjct: 1 ADILSEEQIVD-FKEAFGLFDKDGDGCITVEELATVIRSLD-QNPTEEELQDMISEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G + EF LM +
Sbjct: 59 GNGTIEFDEFLSLMAK 74
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMM 146
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMM 145
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMM 146
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIRESDIDGDGQVNYEEFVTMM 146
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMM 145
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREALN 105
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAFR 91
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 119
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 63 FPEFLTMMARKMKDT--DSEEEIREAF 87
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DQMIREADIDGDGQVNYEEFVQMM 146
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 119
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 63 FPEFLTMMARKMKDT--DSEEEIREAF 87
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 60 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 118
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMM 142
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 61
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 62 FPEFLTMMARKMKDT--DSEEEIREAF 86
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 125
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 126 DEMIREADIDGDGQVNYEEFVQMM 149
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 10 VMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGD 69
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 3 AMADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVD 60
Query: 70 LDGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 93
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 65 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 123
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 124 DEMIREADIDGDGQVNYEEFVQMM 147
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 2 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 59
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF +M R +S+ +REA
Sbjct: 60 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 91
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 388
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMM 412
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 335 FLTMMARKMKDT--DSEEEIREAF 356
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 388
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMM 412
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 335 FLTMMARKMKDT--DSEEEIREAF 356
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 69 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 127
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 128 DEMIREADIDGDGQVNYEEFVQMM 151
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 7 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 64
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 65 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 95
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 59 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 117
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 118 DEMIREADIDGDGQVNYEEFVQMM 141
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 60
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 61 FPEFLTMMARKMKDT--DSEEEIREAF 85
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 119
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 63 FPEFLTMMARKMKDT--DSEEEIREAF 87
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 327 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 385
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMM 409
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 331
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R E + +REA
Sbjct: 332 FLTMMARKMKDTDSEEE--IREAF 353
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREALN 105
DG+G ++ EF +M R +S+ +REA
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDT--DSEEEIREAFR 91
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 62 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 120
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 63
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R +S+ +REA
Sbjct: 64 FPEFLTMMARKMKDT--DSEEEIREAF 88
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ EL F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADVDGDGQINYEEFVKVM 146
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L + I+E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLTDDQ-ISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF LM R +S+ L+EA
Sbjct: 59 DGNGTIDFPEFLNLMARKMKDT--DSEEELKEAF 90
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREALN 105
GDG ++ EF +M R +S+ +REA
Sbjct: 59 GDGTIDFPEFLTMMARKMKDT--DSEEEIREAFR 90
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 369 FLTMMARKMKDT--DSEEEIREAF 390
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 2 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 60 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 90
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 3 DFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLA 62
+F D L V K + E+ F+L D G I+ ++LK A LG ++LTD++L
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQ 143
Query: 63 SMVKEGDLDGDGALNQMEFCVLMFRLS 89
+ E D DGDG +++ EF + + S
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRIXKKTS 170
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 355 IDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 413
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMM 437
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DGDG ++
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTID 356
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF ++M R E + +REA
Sbjct: 357 FPEFLIMMARKMKDTDSEEE--IREAF 381
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 14 KLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGD 73
K+ + E+ F+L D G I+ ++LK A LG ++LTD++L M+ E D DGD
Sbjct: 3 KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGD 61
Query: 74 GALNQMEFCVLMFRLS 89
G +++ EF +M + S
Sbjct: 62 GEVSEQEFLRIMKKTS 77
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 365 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 423
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMM 447
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 369
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 370 FLTMMARKMKDT--DSEEEIREAF 391
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 369 FLTMMARKMKDT--DSEEEIREAF 390
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 363 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 421
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 81 FCVLMFRLSPQLMEESQLWLREALN 105
F +M R +S+ +REA
Sbjct: 368 FLTMMARKMKDT--DSEEEIREAFR 390
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F +M R +S+ +REA
Sbjct: 369 FLTMMAR--KMKYTDSEEEIREAF 390
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ EL F++ G I+ L+ LG + LTD+++
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 123 DEMIREADVDGDGQINYDEFVKVM 146
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 11 MADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
MAD+L E I+E F L G ITT+ L LG Q+ T+ +L M+ E D
Sbjct: 1 MADQLT-EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDA 58
Query: 71 DGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
DG+G ++ EF LM R +S+ L+EA
Sbjct: 59 DGNGTIDFPEFLNLMARKMKDT--DSEEELKEAF 90
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DGDG ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 368
Query: 81 FCVLMFRLSPQLMEESQLWLREALN 105
F +M R +S+ +REA
Sbjct: 369 FLTMMAR--KMKYTDSEEEIREAFR 391
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 363 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 421
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 81 FCVLMFRLSPQLMEESQLWLREALN 105
F +M R +S+ +REA
Sbjct: 368 FLTMMAR--KMKYTDSEEEIREAFR 390
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 363 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 421
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 81 FCVLMFRLSPQLMEESQLWLREALN 105
F +M R +S+ +REA
Sbjct: 368 FLTMMAR--KMKYTDSEEEIREAFR 390
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ EL F++ G I+ L+ LG + LTD+++
Sbjct: 60 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 118
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVM 142
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 81 FCVLMFRLSPQLMEESQLWLREAL 104
F LM R +S+ L+EA
Sbjct: 65 FLNLMARKMKDT--DSEEELKEAF 86
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ EL F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVM 145
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTDE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF LM R +S+ L+EA
Sbjct: 59 GNGTIDFPEFLNLMARKMKDT--DSEEELKEAF 89
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E ++DGDG +N EF +M
Sbjct: 122 DEMIREANIDGDGQVNYEEFVQMM 145
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 89
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 119
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMM 143
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF +M R M++S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMAR----KMKDSEEEIREAF 87
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ +L F++ G I+ L+ LG + LTD+++
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVM 145
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTDE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF LM R +S+ L+EA
Sbjct: 59 GNGTIDFPEFLNLMARKMKDT--DSEEKLKEAF 89
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA + E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D+DGDG +N EF +M
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMM 446
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 81 FCVLMFRLSPQLMEESQLWLREALNEE 107
F +M R W+++ +EE
Sbjct: 369 FLTMMAR-----------WMKDTDSEE 384
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL F++ G+I+ L+ LG + LTDD++ M++E D+DGDG +N EF
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 83 VLM 85
+M
Sbjct: 68 RMM 70
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL F++ G I+ L+ LG + LTD+++ M+KE DLDGDG +N EF
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 83 VLM 85
+M
Sbjct: 69 KMM 71
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF L +MA K+ E+ F++ G I+ L+ LG + LTD+++
Sbjct: 364 IDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG-EKLTDEEV 422
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E +DGDG +N +F +M
Sbjct: 423 DEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL F++ G I+ L+ LG + LTD+++ M+KE DLDGDG +N EF
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 83 VLM 85
+M
Sbjct: 64 KMM 66
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
+DF + L +MA K+ + E+ F++ G I+ L+ LG + LTD+++
Sbjct: 59 IDFPEFLTMMARKMK-DTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEV 116
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E ++DGDG +N EF +M
Sbjct: 117 DEMIREANIDGDGQVNYEEFVQMM 140
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 60
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF +M R ++ + +REA
Sbjct: 61 FPEFLTMMAR---KMKDTDSEEIREAF 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 83 VLM 85
+M
Sbjct: 64 KVM 66
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
VDF + L +MA K+ E+ F++ G ++ L+ LG + L+D+++
Sbjct: 63 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG-EKLSDEEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++ D DGDG +N EF ++
Sbjct: 122 DEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 83 VLM 85
+M
Sbjct: 62 QMM 64
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 83 VLM 85
+M
Sbjct: 65 QMM 67
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEF 81
EL F++L + KGVI + L+ LG +LT+D++ +M+ E D DG G ++ EF
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 82 CVLM 85
LM
Sbjct: 66 KCLM 69
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 83 VLM 85
+M
Sbjct: 65 QMM 67
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 1 MVDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDK 60
+DF + L A K E+ F++ G I+ L+ LG + LTD++
Sbjct: 63 TIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEE 121
Query: 61 LASMVKEGDLDGDGALNQMEFC 82
+ ++E D+DGDG +N EF
Sbjct: 122 VDQXIREADIDGDGQVNYEEFV 143
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L + E D D
Sbjct: 2 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDAD 59
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF R +S+ +REA
Sbjct: 60 GNGTIDFPEFLTXXARKXKDT--DSEEEIREAF 90
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 1 MVDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDK 60
+DF + L A K E+ F++ G I+ L+ LG + LTD++
Sbjct: 62 TIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEE 120
Query: 61 LASMVKEGDLDGDGALNQMEFC 82
+ ++E D+DGDG +N EF
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L + E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G ++ EF R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTXXARKXKDT--DSEEEIREAF 89
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F+L D G IT + L+ A LG ++LT+++L M+ E D + D +++ EF
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDEDEFI 68
Query: 83 VLMFRLS 89
+M + S
Sbjct: 69 RIMKKTS 75
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 83 VLM 85
+M
Sbjct: 66 QMM 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 83 VLM 85
+M
Sbjct: 68 QMM 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 83 VLM 85
+M
Sbjct: 69 QMM 71
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F + +MA ++ E+ F++ G I+ L+ LG + +TD+++
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTDEEI 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M++E D DGDG +N EF ++
Sbjct: 122 DEMIREADFDGDGMINYEEFVWMI 145
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N EF
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 83 VLM 85
+M
Sbjct: 89 QMM 91
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
GDG ++ EF +M R
Sbjct: 59 GDGTIDFPEFLTMMAR 74
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ G I+ L+ LG + LTD+++ M++E D+DGDG +N +F
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 83 VLM 85
+M
Sbjct: 67 QMM 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREALN 105
G+G ++ EF +M R +S+ +REA
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT--DSEEEIREAFR 90
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 2 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 60 GNGTIDFPEFLTMMAR 75
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF +M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I+E F L G ITT+ L LG Q+ T+ +L M+ E D D
Sbjct: 1 ADQLTDE-QISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G ++ EF LM R
Sbjct: 59 GNGTIDFPEFLNLMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E I E F L G ITT+ L LG Q+ T+ +L M+ E D DG+G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 78 QMEFCVLMFR 87
EF +M R
Sbjct: 65 FPEFLTMMAR 74
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 37 GVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFCVLM 85
G IT + L+ A LG Q L ++L +M++E D+D DG +N EF ++
Sbjct: 21 GHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRVNYEEFARML 68
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 21 INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
I E F L G ITT+ L LGL + T+ +L M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLYDKDGDGTITTKELGTVMRSLGL-NPTEAELQDMINEVDADGNGTIDFPE 67
Query: 81 FCVLMFRL 88
F +M R+
Sbjct: 68 FLTMMARI 75
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 2 VDFEDLLPVMADKLGGEGL----INELCNGFQLLMDKVKGVITTESLK-LNAAVLGLQDL 56
VDF+D + +M KL E + EL + F+ G I+T L+ A+LG Q +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ-V 122
Query: 57 TDDKLASMVKEGDLDGDGALNQMEFCVLMFR 87
+ ++++ DL+GDG ++ EF +M R
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEF 81
E+ F++ G I+ L+ LG + LTD+++ ++E D+DGDG +N EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD+L E I E F L G ITT+ L LG + T+ +L + E D D
Sbjct: 1 ADQLTEE-QIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGC-NPTEAELQDXINEVDAD 58
Query: 72 GDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
G+G +N EF R +S+ +REA
Sbjct: 59 GNGTINFPEFLTXXARCXKDT--DSEEEIREAF 89
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQ-----LLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L +E N F+ + D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F L + +KL G + + N F ++ G I + L+ +G + TD+++
Sbjct: 56 INFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR-FTDEEV 114
Query: 62 ASMVKEGDLDGDGALNQMEFCVLM 85
M +E +D G N +EF ++
Sbjct: 115 DEMYREAPIDKKGNFNYVEFTRIL 138
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL----INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLT 57
VDF+D + +M KL E + EL + F+ G I+T L+ L +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 58 DDKLASMVKEGDLDGDGALNQMEFCVLMFR 87
+ ++++ DL+GDG ++ EF +M R
Sbjct: 124 HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL----INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLT 57
VDF+D + +M KL E + EL + F+ G I+T L+ L +
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 58 DDKLASMVKEGDLDGDGALNQMEFCVLMFR 87
+ ++++ DL+GDG ++ EF +M R
Sbjct: 138 HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQ-----LLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ + D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEG---LINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I E LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T++L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 75 FEEFLVMMVR 84
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
E+ F++ GVI + K +G + LTD ++ +KE D DG+G ++ EF
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 83 VLMFRLSPQLMEES 96
L+ + S ++ES
Sbjct: 69 DLI-KKSKNALKES 81
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I E LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 63
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 64 FEEFLVMMVR 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 75 FEEFLVMMVR 84
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F + L +M+ +L EL F++ G+I+ LK +G + LTD ++
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFRLSP 90
M++E DG G +N +F L+ + S
Sbjct: 123 DDMLREVS-DGSGEINIQQFAALLSKGSS 150
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F + L +M+ +L EL F++ G+I+ LK +G + LTD ++
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEV 121
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFR 87
M++E DG G +N +F L+ +
Sbjct: 122 DDMLREVS-DGSGEINIQQFAALLSK 146
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
+DFE+ L +M ++ + EL F++ G I E L G + +TD
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
+++ S++K+GD + DG ++ EF +M
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+ + L +LG Q T ++L ++++E D DG G ++
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGTID 71
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREALNE 106
EF V+M R Q+ E+++ E L E
Sbjct: 72 FEEFLVMMVR---QMKEDAKGKSEEELAE 97
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL + F++ G I E LK+ G + +T+D + ++K+GD + DG ++ EF
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 83 VLM 85
M
Sbjct: 65 EFM 67
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 75 FEEFLVMMVR 84
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 32.0 bits (71), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREALNE 106
EF V+M R Q+ E+++ E L +
Sbjct: 75 FEEFLVMMVR---QMKEDAKGKSEEELED 100
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 32.0 bits (71), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 75 FEEFLVMMVR 84
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 71
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF V+M R Q+ E+++ E L
Sbjct: 72 FEEFLVMMVR---QMKEDAKGKSEEEL 95
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T ++L ++++E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREAL 104
EF V+M R Q+ E+++ E L
Sbjct: 75 FEEFLVMMVR---QMKEDAKGKSEEEL 98
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL + F++ G I E LK+ G + +T+D + ++K+GD + DG ++ EF
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 83 VLM 85
M
Sbjct: 67 EFM 69
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMAD--KLGGEGLINE-LCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M K +G E L + F++ G I E LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 22 NELCNGFQLLMDKVK-GVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQME 80
NE F + + + G I+T+ L +LG Q+ T ++L M+ E D DG G ++ E
Sbjct: 18 NEFKAAFDIFVQGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 81 FCVLMFR 87
F V+M R
Sbjct: 77 FLVMMVR 83
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL + F++ G I E LK+ G + +T+D + ++K+GD + DG ++ EF
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 83 VLM 85
M
Sbjct: 70 EFM 72
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
+DFE+ L +M ++ + EL F++ G I E L G + +TD
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
+++ S++K+GD + DG ++ EF +M
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+ + L +LG Q T ++L ++++E D DG G ++
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGTID 71
Query: 78 QMEFCVLMFRLSPQLMEESQLWLREALNE 106
EF V+M R Q+ E+++ E L E
Sbjct: 72 FEEFLVMMVR---QMKEDAKGKSEEELAE 97
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKLNAAVL--GLQDLTDDKLASMVKEGDLDGDGALNQM 79
+++ F ++ G I + LKL V G + LTD + + +K GD DGDGA+
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVD 101
Query: 80 EFCVLM 85
E+ L+
Sbjct: 102 EWAALV 107
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I + LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I + LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ E+ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 GEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGAL 76
G+ ++E F+L + G IT E L+ G++ + M E D G+G +
Sbjct: 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVR-VEPAAFNEMFNEADATGNGKI 59
Query: 77 NQMEFCVLMFRLSPQLMEESQLWLREALN 105
EF +M R Q E LR+A
Sbjct: 60 QFPEFLSMMGRRMKQTTSED--ILRQAFR 86
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL + F++ G I E LK+ G + +T+D + ++K+GD + DG ++ EF
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 83 VLM 85
M
Sbjct: 75 EFM 77
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 22 NELCNGFQLL-MDKVKGVITTESLKLNAAVLGLQDLTDDKLASM----VKEGDLDGDGAL 76
N+L FQL +D+ + E L++ ++G+Q +T+++L ++ V+E D DGDGA+
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQ-VTEEQLENIADRTVQEADEDGDGAV 172
Query: 77 NQMEFC 82
+ +EF
Sbjct: 173 SFVEFT 178
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I + LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ EF V+M R
Sbjct: 65 DEDGSGTVDFDEFLVMMVR 83
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 2 VDFEDLLPVMADKLGGEGL---INELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTD 58
VDF++ L +M + + EL + F++ G I + LK+ G + +T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITE 130
Query: 59 DKLASMVKEGDLDGDGALNQMEFCVLM 85
D + ++K+GD + DG ++ E M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKLNAAVL--GLQDLTDDKLASMVKEGDLDGDGALNQM 79
+++ F + G I + LKL V G + LTD + + +K GD DGDGA+
Sbjct: 42 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 101
Query: 80 EFCVLM 85
E+ L+
Sbjct: 102 EWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKLNAAVL--GLQDLTDDKLASMVKEGDLDGDGALNQM 79
+++ F + G I + LKL V G + LTD + + +K GD DGDGA+
Sbjct: 41 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 100
Query: 80 EFCVLM 85
E+ L+
Sbjct: 101 EWVALV 106
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 30.8 bits (68), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 VDFEDLLPVMADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKL 61
++F + L +M+ +L EL F++ G+I+ LK +G + LTD ++
Sbjct: 64 IEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEV 122
Query: 62 ASMVKEGDLDGDGALNQMEFCVLMFR 87
M++E DG G +N +F L+ +
Sbjct: 123 DEMLREVS-DGSGEINIKQFAALLSK 147
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
EL + F++ G I + LK+ G + +T+D + ++K+GD + DG ++ EF
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 83 VLM 85
M
Sbjct: 66 EFM 68
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 24 LCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFCV 83
L + F G IT + ++ GL D+ + M+KE D D DG ++ EF
Sbjct: 84 LVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI---HIDDMIKEIDQDNDGQIDYGEFAA 140
Query: 84 LMFR------LSPQLMEESQLWLREAL 104
+M + + + M ++ L LR+AL
Sbjct: 141 MMRKRKGNGGIGRRTMRKT-LNLRDAL 166
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ E+ V+M R
Sbjct: 65 DEDGSGTVDFDEWLVMMVR 83
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 2 VDFEDLLPVMADKLGGEGLINELC-NGFQLLMDKVKGVITTESLKLNAAVLGLQD----L 56
+ + D L DK L E+C F+ G I+ E LK + G D L
Sbjct: 110 IHYTDFLAATIDK--QTYLKKEVCLIPFKFFDIDGNGKISVEELK---RIFGRDDIENPL 164
Query: 57 TDDKLASMVKEGDLDGDGALNQMEFCVLM 85
D + S+++E DL+GDG ++ EF ++M
Sbjct: 165 IDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 13 DKLGGEGLINEL--CNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
DK + + + L NGF L DKVK V+ L + D L + + D+
Sbjct: 13 DKAKYDAIFDSLSPVNGF-LSGDKVKPVLLNSKLPV------------DILGRVWELSDI 59
Query: 71 DGDGALNQMEFCVLMF 86
D DG L++ EF V MF
Sbjct: 60 DHDGMLDRDEFAVAMF 75
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 14 KLGGEGLINELCNGFQLLMD-----KVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEG 68
K E L E N F+ D G I+T+ L +LG Q+ T ++L M+ E
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEV 64
Query: 69 DLDGDGALNQMEFCVLMFR 87
D DG G ++ E+ V+M R
Sbjct: 65 DEDGSGTVDFDEWLVMMAR 83
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 13 DKLGGEGLINEL--CNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
DK + + + L NGF L DKVK V+ L + D L + + D+
Sbjct: 8 DKAKYDAIFDSLSPVNGF-LSGDKVKPVLLNSKLPV------------DILGRVWELSDI 54
Query: 71 DGDGALNQMEFCVLMF 86
D DG L++ EF V MF
Sbjct: 55 DHDGMLDRDEFAVAMF 70
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 2 VDFEDLLPVMADKLGGEGLI--NELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDD 59
+D+ + + V D+ + L+ ++L + FQ G I+ + L A+V GL L
Sbjct: 124 IDYSEFVTVAMDR---KSLLSKDKLESAFQKFDQDGNGKISVDEL---ASVFGLDHLESK 177
Query: 60 KLASMVKEGDLDGDGALNQMEFCVLMFRL----SPQL 92
M+ D + DG ++ EFC ++ +L PQL
Sbjct: 178 TWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNEPQL 214
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLK--LNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQM 79
N++ F+ + G I E LK L + +DLTD + + +K D DGDG +
Sbjct: 42 NDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGID 101
Query: 80 EFCVLM 85
EF L+
Sbjct: 102 EFETLV 107
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD L E +++ F L G IT E L L Q+ T+++L M+ E D D
Sbjct: 1 ADILSEEQIVD-FKEAFGLFDKDGDGCITVEELATVIRSLD-QNPTEEELQDMISEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G + EF LM +
Sbjct: 59 GNGTIEFDEFLSLMAK 74
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 39 ITTESLKLNAAVLGLQDLTD-DKLASMVKEGDLDGDGALNQMEFCVLMFRLS 89
I+ E LKL LG L L M++E D +GDG ++ EF V+M ++S
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKIS 75
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 13 DKLGGEGLINEL--CNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
DK + + + L NGF L DKVK V+ L + D L + + D+
Sbjct: 8 DKAKYDAIFDSLSPVNGF-LSGDKVKPVLLNSKLPV------------DILGRVWELSDI 54
Query: 71 DGDGALNQMEFCVLMF 86
D DG L++ EF V MF
Sbjct: 55 DHDGMLDRDEFAVAMF 70
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 13 DKLGGEGLINEL--CNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDL 70
DK + + + L NGF L DKVK V+ L + D L + + D+
Sbjct: 13 DKAKYDAIFDSLSPVNGF-LSGDKVKPVLLNSKLPV------------DILGRVWELSDI 59
Query: 71 DGDGALNQMEFCVLMF 86
D DG L++ EF V MF
Sbjct: 60 DHDGMLDRDEFAVAMF 75
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.5 bits (62), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD L E +++ F L G IT E L L Q+ T+++L M+ E D D
Sbjct: 1 ADILSEEQIVD-FKEAFGLFDKDGDGCITVEELATVIRSLD-QNPTEEELQDMISEVDAD 58
Query: 72 GDGALNQMEFCVLMFR 87
G+G + EF LM +
Sbjct: 59 GNGTIEFDEFLSLMAK 74
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 22 NELCNGFQLL-MDKVKGVITTESLKLNAAVLGLQDLTDDKLASM----VKEGDLDGDGAL 76
N+L F+L +DK + + E L++ ++G+ +++D++L S+ ++E D DGD A+
Sbjct: 113 NKLHFAFRLYDLDKDEKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAI 171
Query: 77 NQMEFCVLM 85
+ EF ++
Sbjct: 172 SFTEFVKVL 180
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 18 EGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALN 77
E +I E F + G I+T+ L +LG Q+ T +L +++ E D DG G ++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKCELDAIICEVDEDGSGTID 74
Query: 78 QMEFCVLMFR 87
EF V+M R
Sbjct: 75 FEEFLVMMVR 84
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2 VDFEDLLPVMADKLG----GEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLT 57
+DF+ + A LG E + EL F+L + G I+T+ ++ A L + L+
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD-ETLS 125
Query: 58 DDKLASMVKEGDLDGDGALNQMEFCVLM 85
+ L +M+ E D DG G ++ EF +M
Sbjct: 126 SEDLDAMIDEIDADGSGTVDFEEFMGVM 153
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLK--LNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQM 79
N++ + F+ + + G + E LK L G ++LT+ + S++ D DGDG +
Sbjct: 42 NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
Query: 80 EF 81
EF
Sbjct: 102 EF 103
>pdb|1G5Z|A Chain A, Crystal Structure Of Lyme Disease Antigen Outer Surface
Protein C (Ospc) From Borrelia Burgdorferi Strain N40
Length = 164
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 41 TESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEFCVLMFRLSPQLMEESQLWL 100
T LK AVLGL +LTDD + + + D ++E +F+ L + +Q L
Sbjct: 95 TNKLKSEHAVLGLDNLTDDNAQRAILKKHANKDKGAAELEK---LFKAVENLSKAAQDTL 151
Query: 101 REALNE 106
+ A+ E
Sbjct: 152 KNAVKE 157
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 2 VDFEDLLPVMADKLGGEGLI--NELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDD 59
+D+ + + V D+ + L+ ++L + FQ G I+ + L A+V GL L
Sbjct: 407 IDYSEFVTVAMDR---KSLLSKDKLESAFQKFDQDGNGKISVDEL---ASVFGLDHLESK 460
Query: 60 KLASMVKEGDLDGDGALNQMEFCVLMFRL 88
M+ D + DG ++ EFC ++ +L
Sbjct: 461 TWKEMISGIDSNNDGDVDFEEFCKMIQKL 489
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 22 NELCNGFQLL-MDKVKGVITTESLKLNAAVLGLQDLTDDKLASM----VKEGDLDGDGAL 76
N+L F+L +DK + E L++ ++G+ +++D++L S+ ++E D DGD A+
Sbjct: 113 NKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAI 171
Query: 77 NQMEFCVLM 85
+ EF ++
Sbjct: 172 SFTEFVKVL 180
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 45 KLNAAVLG-----LQDLTDDKLASMVKEGDLDGDGALNQMEFC 82
K++AA LG L +T D++ M+ E D DGDG ++ EF
Sbjct: 25 KISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFT 67
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 56 LTDDKLASMVKEGDLDGDGALNQMEFCVLM 85
LTD + + +K GD DGDG + EF L+
Sbjct: 78 LTDGETKTFLKAGDSDGDGKIGVDEFTALV 107
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLDGDGALNQMEF 81
EL F+L + G I+T+ ++ A L + L+ + L +M+ E D DG G ++ EF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELD-ETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 82 CVLM 85
+M
Sbjct: 62 MGVM 65
>pdb|2OWY|A Chain A, The Recombination-Associated Protein Rdgc Adopts A Novel
Toroidal Architecture For Dna Binding
pdb|2OWY|B Chain B, The Recombination-Associated Protein Rdgc Adopts A Novel
Toroidal Architecture For Dna Binding
Length = 306
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 4 FEDLLPVMADKLGGEGLINELCNGFQLLM 32
FEDLL A+K GGE + +L F L+M
Sbjct: 255 FEDLLQEQAEKDGGEDALGQLDASFTLMM 283
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 12 ADKLGGEGLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKEGDLD 71
AD +G + EL + F+ G I+T L+ L + + ++++ DL+
Sbjct: 1 ADMIG----VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLN 56
Query: 72 GDGALNQMEFCVLMFR 87
GDG ++ EF +M R
Sbjct: 57 GDGRVDFEEFVRMMSR 72
>pdb|2XKJ|E Chain E, Crystal Structure Of Catalytic Core Of A. Baumannii Topo
Iv (Pare-Parc Fusion Truncate)
Length = 767
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 52 GLQDLTDDKLASMVKEGDLDGDGALNQMEFCVLMFRLSPQLMEESQLWL 100
G DL++ + + D D DG C L + P L+EE L++
Sbjct: 105 GSDDLSELRYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYV 153
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 66 KEGDLDGDGALNQMEFCVLMFRLSPQLMEESQ 97
KE D++ DGA+N EF +L+ ++ ++S
Sbjct: 56 KELDINTDGAVNFQEFLILVIKMGVAAHKKSH 87
>pdb|2XKK|A Chain A, Crystal Structure Of Moxifloxacin, Dna, And A. Baumannii
Topo Iv (Pare-Parc Fusion Truncate)
pdb|2XKK|C Chain C, Crystal Structure Of Moxifloxacin, Dna, And A. Baumannii
Topo Iv (Pare-Parc Fusion Truncate)
Length = 767
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 52 GLQDLTDDKLASMVKEGDLDGDGALNQMEFCVLMFRLSPQLMEESQLWL 100
G DL++ + + D D DG C L + P L+EE L++
Sbjct: 105 GSDDLSELRYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYV 153
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 66 KEGDLDGDGALNQMEFCVLMFRLSPQLMEESQ 97
KE D++ DGA+N EF +L+ ++ ++S
Sbjct: 56 KELDINTDGAVNFQEFLILVIKMGVAAHKKSH 87
>pdb|1B7B|A Chain A, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|B Chain B, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|C Chain C, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|D Chain D, Carbamate Kinase From Enterococcus Faecalis
pdb|2WE4|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|D Chain D, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE5|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
Length = 310
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 99 WLREALNEELNNAG 112
WL ALN+ELN AG
Sbjct: 89 WLSNALNQELNKAG 102
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 60 KLASMVKEGDLDGDGALNQMEFCVLMFRLSPQLMEESQLWLREAL 104
+L M+ E D DG+G ++ EF +M R +S+ +REA
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDT--DSEEEIREAF 44
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 41 TESLKLNAAVLGLQDLTDDK--LASMVKEGDLDGDGALNQMEFCVLM 85
E K ++ G QDL+DDK L + K D+DGDG L + E
Sbjct: 56 NEFAKFYGSIQG-QDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF 101
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 41 TESLKLNAAVLGLQDLTDDK--LASMVKEGDLDGDGALNQMEFCVLM 85
E K ++ G QDL+DDK L + K D+DGDG L + E
Sbjct: 56 NEFAKFYGSIQG-QDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF 101
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 23 ELCNGFQLLMDKVKGVITTESLKLNAAVLGLQD-LTDDKLASMVKEGDLDGDGALNQMEF 81
E+ + F+ L + G I + +L +L L D LT ++ ++KE + GDGA+N F
Sbjct: 77 EMLDAFRALDKEGNGTI--QEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESF 134
Query: 82 CVLMFRLSP 90
++ P
Sbjct: 135 VDMLVTGYP 143
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 22 NELCNGFQLLMDKVKGVITTESLKL--NAAVLGLQDLTDDKLASMVKEGDLDGDGALNQM 79
+++ F ++ G I + LKL + LTD + + +K GD DGDG +
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 100
Query: 80 EFCVLM 85
E+ L+
Sbjct: 101 EWTALV 106
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 19 GLINELCNGFQLLMDKVKGVITTESLKLNAAVLGLQDLTDDKLASMVKE 67
GLI E+C Q L ++VK + S A+ + L K A +K+
Sbjct: 181 GLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEELKQ 229
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 23 ELCNGFQLLMDKVKG---VITTESLK--LNAAVLGLQDLTDDKLA-----SMVKEGDLDG 72
E+ + F+ L K+ G I+ + L+ LN + +DL + + SMV D DG
Sbjct: 531 EIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG 590
Query: 73 DGALNQMEFCVLMFRLSPQL 92
+G L +EF +L R+ L
Sbjct: 591 NGKLGLVEFNILWNRIRNYL 610
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 48 AAVLGLQDLTDDK--LASMVKEGDLDGDGALNQMEFCVLMFRL 88
AA + QDL+D+K L + K D DGDG L + E +
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF 104
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 56 LTDDKLASMVKEGDLDGDGALNQMEFCVLM 85
LTD + + +K GD DGDG + E+ L+
Sbjct: 77 LTDGETKTFLKAGDSDGDGKIGVDEWTALV 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,369,238
Number of Sequences: 62578
Number of extensions: 118650
Number of successful extensions: 610
Number of sequences better than 100.0: 192
Number of HSP's better than 100.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 370
Number of HSP's gapped (non-prelim): 261
length of query: 116
length of database: 14,973,337
effective HSP length: 79
effective length of query: 37
effective length of database: 10,029,675
effective search space: 371097975
effective search space used: 371097975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)