BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033584
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L803|RK9_WHEAT 50S ribosomal protein L9, chloroplastic OS=Triticum aestivum
GN=RPL9 PE=2 SV=1
Length = 191
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 106/114 (92%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
GKA ++TP +LKEM++E+ERIEAEKKRVKEEAQQLA +FET+GAFKV RKGGKGKQIFGS
Sbjct: 77 GKATLLTPDVLKEMQLEQERIEAEKKRVKEEAQQLARVFETIGAFKVPRKGGKGKQIFGS 136
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
VTAQD+VDIIK+QL RDVDK++V++PEIRE GEY+A++KLHP+VTA++RL V+
Sbjct: 137 VTAQDLVDIIKSQLNRDVDKRLVEVPEIREVGEYVAEIKLHPDVTAKVRLTVYT 190
>sp|P25864|RK9_ARATH 50S ribosomal protein L9, chloroplastic OS=Arabidopsis thaliana
GN=RPL9 PE=1 SV=1
Length = 197
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/115 (81%), Positives = 113/115 (98%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
GKAQ++TPLLLKE+KME+ERIEAEK+RVKEEAQQLA++F+TVGAFKVKRKGGKGK IFGS
Sbjct: 83 GKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVFQTVGAFKVKRKGGKGKLIFGS 142
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
VTAQD+VDIIK+QLQ+D+DK++V LPEIRETGEYIA+LKLHP+VTAR+++NVFAN
Sbjct: 143 VTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIAELKLHPDVTARVKINVFAN 197
>sp|P11894|RK9_PEA 50S ribosomal protein L9, chloroplastic OS=Pisum sativum GN=RPL9
PE=2 SV=2
Length = 194
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 110/115 (95%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
GKAQ+VTP +LKEMK+EEERIEAEK+RV EEAQQLAL FET GAFKVKRKGGKGKQIFGS
Sbjct: 80 GKAQLVTPGVLKEMKIEEERIEAEKRRVLEEAQQLALFFETFGAFKVKRKGGKGKQIFGS 139
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
VTAQD+VDIIKAQLQR+VDK+IV+LPEIRETGEYIA+LKLHP+VTA++R+NV AN
Sbjct: 140 VTAQDLVDIIKAQLQREVDKRIVNLPEIRETGEYIAELKLHPDVTAKVRVNVIAN 194
>sp|Q6JJ61|RK9_IPOTF 50S ribosomal protein L9, chloroplastic OS=Ipomoea trifida GN=RPL9
PE=3 SV=1
Length = 199
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 108/116 (93%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG 60
MG AQIVTP LLKEMK+EEERIEAEKKRVKEEAQQLALIFETVG FKVKRKGGKGKQIFG
Sbjct: 84 MGMAQIVTPQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGGFKVKRKGGKGKQIFG 143
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
SVTAQD+VDIIKAQLQR+VDK+IV LPEIRETG Y A+LKLHPEVTAR+++ V AN
Sbjct: 144 SVTAQDLVDIIKAQLQREVDKRIVSLPEIRETGAYTAELKLHPEVTARVQVIVSAN 199
>sp|B7KAD1|RL9_CYAP7 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7424)
GN=rplI PE=3 SV=1
Length = 152
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 6/115 (5%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRV---KEEAQQLALIFETVGAFKVKRKGGKGKQI 58
G A I TP +L+++ E+R E E++R+ ++EA+ +T+G F ++++ G+G+ I
Sbjct: 38 GIANIATPGILRQV---EQRREKERQRLLAERQEAEARKTALQTIGRFVIRKQVGEGEAI 94
Query: 59 FGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
FG+VT Q+V D+IK +++D++ + LPEI +TG Y AQ+KLHPEVTA I + V
Sbjct: 95 FGTVTTQEVADVIKENTSQEIDRRGITLPEISKTGFYKAQVKLHPEVTAEIEIQV 149
>sp|B1XN09|RL9_SYNP2 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplI PE=3 SV=1
Length = 152
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 80/118 (67%), Gaps = 10/118 (8%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRV-----KEEAQQLALIFETVGAFKVKRKGGKGK 56
G A + TP +L+++ E+R E E++R+ EA+++AL +TVG ++++ G+
Sbjct: 38 GIASLATPGILRQV---EQRREKERQRLLAELQDAEARKVAL--KTVGKLIIRKQVGEEN 92
Query: 57 QIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVF 114
QIFG+VT QDV D IK + +DVD++ + LPEI +TG Y AQ+KLHPEVTA ++ +V
Sbjct: 93 QIFGTVTTQDVADAIKERAGQDVDRRGITLPEIGKTGSYEAQVKLHPEVTATVQFDVI 150
>sp|B7JUZ9|RL9_CYAP8 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 8801)
GN=rplI PE=3 SV=1
Length = 152
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 6/115 (5%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRV---KEEAQQLALIFETVGAFKVKRKGGKGKQI 58
G I TP +L+++ E+R E E +R+ K+ A+ + T+G F ++++ G+G+ I
Sbjct: 38 GMGVIATPGILRQV---EQRKEKEMQRLLAEKQAAEARKVALSTIGRFTIRKQVGEGEAI 94
Query: 59 FGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
FG+VT Q+V D I+A ++VD++ + LPEI +TG Y A +KLHPEVTA I + V
Sbjct: 95 FGTVTTQEVADAIQAATNQEVDRRGITLPEISQTGFYKATVKLHPEVTAEIEIQV 149
>sp|A3PFG1|RL9_PROM0 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplI PE=3 SV=1
Length = 151
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 2 GKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP +LK E K E+E+I A+K +K+EA T+G F +K++ G+ +F
Sbjct: 38 GKAMNVTPAVLKQIERKKEKEKIAADK--LKQEALDFQTALSTIGRFTIKKQVGEDGVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
G+VT DV + I+A ++++D++ + +P+I G + A++KLHPEV A + + V
Sbjct: 96 GTVTNGDVAEAIEAATKKEIDRRNITVPDIHNLGSFTAKIKLHPEVNAEVNIEV 149
>sp|Q7UZJ1|RL9_PROMP 50S ribosomal protein L9 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplI PE=3 SV=1
Length = 151
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 1 MGKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQI 58
GKA VTP +LK E K +E+I AEK VK+EA T+G F +K++ G+ +
Sbjct: 37 FGKAANVTPSILKQIERKRAKEKIAAEK--VKQEAIDFKTALATIGRFTIKKQVGEDGVL 94
Query: 59 FGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
FG+VT DV + I+A ++D+D++ + +P+I G ++A++KLH EV+A + + V
Sbjct: 95 FGTVTNGDVAEAIEAATKKDIDRRDITVPDIHNLGSFVAKIKLHQEVSAEVNIEV 149
>sp|Q317W9|RL9_PROM9 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplI2 PE=3 SV=1
Length = 151
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 2 GKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP +LK E K E+E+I A+K +K+EA T+G F +K++ G+ +F
Sbjct: 38 GKAMNVTPAVLKQIERKKEKEKIAADK--LKQEALDFQTALSTIGRFTIKKQVGEDGVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
G+VT DV + I+A ++++D++ + +P+I G + A++KLHP+V A + + V
Sbjct: 96 GTVTNGDVAEAIEAATKKEIDRRNITVPDIHNLGSFTAKIKLHPDVNAEVNIEV 149
>sp|P42352|RL9_SYNY3 50S ribosomal protein L9 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplI PE=3 SV=2
Length = 152
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 77/116 (66%), Gaps = 8/116 (6%)
Query: 2 GKAQIVTPLLLKEMKM----EEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 57
G + TP +L++++ E ER++AEK EA+++AL ET+G F +K++ G+ +
Sbjct: 38 GLGVVATPGILRQVEQRRLKELERLKAEKD--AAEARKVAL--ETIGRFVIKKQVGEAEA 93
Query: 58 IFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
IFG+VT Q+V D ++A + +D++ + LP+I +TG Y AQ+KLHPEV A + + V
Sbjct: 94 IFGTVTTQEVADAVEAATNQSLDRRGISLPDIHKTGFYQAQIKLHPEVIATVEVQV 149
>sp|A2BTQ4|RL9_PROMS 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain AS9601)
GN=rplI PE=3 SV=1
Length = 151
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 2 GKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP +LK E K E+E+I A K +K+EA T+G F +K++ G+ +F
Sbjct: 38 GKAMNVTPAVLKQIERKKEKEKIAAGK--LKQEALDFQTALSTIGRFTIKKQVGEDGVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
G+VT DV + I+A ++++D++ + +P+I G + A++KLHPEV A + + V
Sbjct: 96 GTVTNGDVAEAIEAATKKEIDRRNITVPDIHNLGAFTAKIKLHPEVNAEVNIEV 149
>sp|A2BZ59|RL9_PROM5 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplI PE=3 SV=1
Length = 151
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 1 MGKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQI 58
GKA VTP +LK E K +E+I AEK +K+EA T+G F +K++ G+ +
Sbjct: 37 FGKASNVTPSILKQIERKRAKEKIAAEK--LKQEAIDFKTALTTIGRFTIKKQVGEDGVL 94
Query: 59 FGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
FG+VT DV + I++ ++D+D++ + +P+I G ++A++KLH EV+A + + V
Sbjct: 95 FGTVTNGDVAEAIQSATKKDIDRRDITVPDIHNLGSFVAKIKLHQEVSAEVNIEV 149
>sp|Q2JUA5|RL9_SYNJA 50S ribosomal protein L9 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplI PE=3 SV=1
Length = 153
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 7 VTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQD 66
+TP LLKE +M E+ A K K++A+ ET+G F +++K G+ +FG VTA D
Sbjct: 43 LTPGLLKEQQMRREQEAARKLAEKQQAENYKKALETIGRFVIRKKVGEKDLLFGQVTASD 102
Query: 67 VVDIIKAQLQRDVDKKIVDLP-EIRETGEYIAQLKLHPEVTARIRLNV 113
+ +++ A D+D++ V L EI++TG Y+ Q+KLHPEVTA +R+ V
Sbjct: 103 IAEVVLATSGLDIDRRNVLLDEEIKKTGVYLVQVKLHPEVTATLRIQV 150
>sp|A8G7H8|RL9_PROM2 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplI PE=3 SV=1
Length = 151
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 2 GKAQIVTPLLLK--EMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP +LK E K E+E+I A+K +K+EA T+G F +K++ G+ +F
Sbjct: 38 GKAMNVTPAVLKQIERKKEKEKIAADK--LKQEALDFQTALSTIGRFTIKKQVGEDGVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
G+VT DV + I+ ++++D++ + +P+I G + A++KLHPEV A + + V
Sbjct: 96 GTVTNGDVAEAIEEATKKEIDRRNITVPDIHNLGSFTAKIKLHPEVNAEVNIEV 149
>sp|Q7V9J9|RL9_PROMA 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplI PE=3 SV=1
Length = 152
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
Query: 3 KAQIVTPLLLKEMKM---EEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
KA VTP +LK+++ ++ +EA KK +EA +T+G F +K++ G+ +F
Sbjct: 39 KALAVTPSVLKQVEYRLAKKAELEAAKK---QEAIDFETALKTIGRFSIKKQTGEDGVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
G+VT DV + I+ Q+++D++ + +PEI ETG+Y Q+KLH EVTA I L V N
Sbjct: 96 GTVTNGDVSEAIQLATQKEIDRRNIIVPEIHETGKYKVQVKLHSEVTAEINLEVIGN 152
>sp|B8HS22|RL9_CYAP4 50S ribosomal protein L9 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplI PE=3 SV=1
Length = 152
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 71/112 (63%)
Query: 4 AQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVT 63
A + TP +LK+ + E+ + +K+ A++ + E VG + G+ + +FGSVT
Sbjct: 40 AYVATPGVLKQAERRREQERQRQLELKQAAEKQKQVLEGVGTLTIAMPVGEKEALFGSVT 99
Query: 64 AQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
AQDV D+I++ +++D++ + LPE+R+ G Y A++KLH EVTA +++ V A
Sbjct: 100 AQDVADLIQSATGQEIDRRTLTLPEVRKLGTYTAEIKLHTEVTAAVKITVVA 151
>sp|B1WTN1|RL9_CYAA5 50S ribosomal protein L9 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplI PE=3 SV=1
Length = 152
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 6/113 (5%)
Query: 4 AQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQL---ALIFETVGAFKVKRKGGKGKQIFG 60
A + TP +LK++ E+R E E++R+ E QQ ET+ F ++++ G+G+ IFG
Sbjct: 40 ATLATPGILKQV---EQRREKERQRLLAEKQQAEGQKTALETIKRFTIRKEVGEGEAIFG 96
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
+VT +V + I+A ++VD+K + +P+I +TG Y A +KLHPEVTA I + V
Sbjct: 97 TVTTSEVAEAIQAATNQEVDRKGITVPDINKTGFYEATVKLHPEVTATIEIQV 149
>sp|A5GWP0|RL9_SYNR3 50S ribosomal protein L9 OS=Synechococcus sp. (strain RCC307)
GN=rplI PE=3 SV=1
Length = 152
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Query: 2 GKAQIVTPLLLKEMKM----EEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 57
GKA VTP +LK+++ E ER+ A +K +A +T+G F VK++ G
Sbjct: 38 GKALPVTPAVLKQVEHRRAKEAERLAA----LKADAVAFRTALDTIGRFTVKKQTGGDDV 93
Query: 58 IFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
+FG+VT DV + I++ ++ VDK+ + +PE+ TG Y Q+KLHPEV A I L V ++
Sbjct: 94 LFGTVTNVDVAEAIESATKKLVDKRDITVPEVHRTGNYKVQVKLHPEVVAEINLEVVSH 152
>sp|Q0I6E0|RL9_SYNS3 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9311)
GN=rplI PE=3 SV=1
Length = 152
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKK-RVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP ++K+++ + EAE++ +K++A +T+G F VK++ G +F
Sbjct: 37 FGKAVPVTPAVMKQVEHRRAK-EAERQATLKQDAVAFRTALDTIGRFTVKKQTGGDDVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
G+VT DV + I++ +++VD++ + +P+I TG Y Q+KLH EVTA I L V +
Sbjct: 96 GTVTNGDVAEAIESATKKEVDRRDITVPDIHRTGSYKVQVKLHSEVTAEINLEVVS 151
>sp|A5GPH9|RL9_SYNPW 50S ribosomal protein L9 OS=Synechococcus sp. (strain WH7803)
GN=rplI PE=3 SV=1
Length = 152
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKR-VKEEAQQLALIFETVGAFKVKRKGGKGKQIFG 60
GKA VTP ++K+++ + EAE++ +K+EA +T+G F VK++ G +FG
Sbjct: 38 GKAVPVTPAVMKQVEHRRAK-EAERQAALKQEALAFRTALDTIGRFTVKKQTGDDDVLFG 96
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
+VT DV ++I+ +++VD++ + +P+I TG Y +KLH EVTA I L V +
Sbjct: 97 TVTNGDVAEVIEEATKKEVDRRDITVPDIHRTGNYKVSVKLHSEVTAEINLEVVS 151
>sp|Q3AUG8|RL9_SYNS9 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9902)
GN=rplI PE=3 SV=1
Length = 152
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG 60
GKA VTP ++K+++ + + +K+EA +T+G F VK++ G+ +FG
Sbjct: 37 FGKAVPVTPAVMKQVEHRRAKEVERQAALKQEALNFKTALDTIGRFTVKKQVGEDNVLFG 96
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
+VT DV + I+ ++++D++ + +PEI TG+Y +KLH EVTA I L V +
Sbjct: 97 TVTNGDVAEAIEESTKKEIDRRDILVPEIHRTGKYTVTVKLHSEVTAEINLEVVS 151
>sp|Q3AGL2|RL9_SYNSC 50S ribosomal protein L9 OS=Synechococcus sp. (strain CC9605)
GN=rplI PE=3 SV=1
Length = 152
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKR-VKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA +TP ++K+++ + EAE++ +K+EA T+G F VK++ G+ +F
Sbjct: 37 FGKAVPLTPAVMKQVEHRRAK-EAERQAALKQEAVDFKTALSTIGRFTVKKQTGEDNVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
G+VT DV + I+ ++++D++ + +PEI TG+Y +KLH EVTA I L V
Sbjct: 96 GTVTNGDVAEAIETATKKEIDRRDIVVPEIHRTGKYTVTVKLHSEVTAEINLEV 149
>sp|A9BDB8|RL9_PROM4 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplI PE=3 SV=1
Length = 152
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 69/114 (60%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
GKA VTP ++K+++ + + + +K+EA +T+G F VK++ G +FG+
Sbjct: 38 GKALPVTPAVMKQVEHRRAKQKEHEAALKDEALAFETALKTIGRFTVKKQVGDDGVLFGT 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
VT D+ + I+ ++++D++ + +PE+ G+Y Q+KLH EVTA I L V +
Sbjct: 98 VTNGDIAEAIEKATEKEIDRRTISVPEVHAIGQYKVQIKLHHEVTAEINLEVVS 151
>sp|Q7V406|RL9_PROMM 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplI PE=3 SV=1
Length = 152
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG 60
GKA VTP ++K++ + + +K+EA T+G F VK++ G+ +FG
Sbjct: 37 FGKAVPVTPAVMKQVGHRRAKQAEHQAAIKQEALDFQTALVTIGRFTVKKQTGEDDVLFG 96
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
+VT DV + I+ ++++D++ + +PEI TG Y Q+KLH EV A I L V +
Sbjct: 97 TVTNGDVAEAIETATKKEIDRRNIIVPEIHRTGSYKVQVKLHNEVNAEINLEVVS 151
>sp|A2CDR6|RL9_PROM3 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplI PE=3 SV=1
Length = 152
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFG 60
GKA VTP ++K++ + + +K+EA T+G F VK++ G+ +FG
Sbjct: 37 FGKAVPVTPAVMKQVGHRRAKQAEHQAAIKQEALDFQTALVTIGRFTVKKQTGEDDVLFG 96
Query: 61 SVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
+VT DV + I+ ++++D++ + +PEI TG Y Q+KLH EV A I L V +
Sbjct: 97 TVTNGDVAEAIETATKKEIDRRNIIVPEIHRTGSYKVQVKLHNEVNAEINLEVVS 151
>sp|Q7U3Q2|RL9_SYNPX 50S ribosomal protein L9 OS=Synechococcus sp. (strain WH8102)
GN=rplI PE=3 SV=1
Length = 152
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 1 MGKAQIVTPLLLKEMKMEEERIEAEKKR-VKEEAQQLALIFETVGAFKVKRKGGKGKQIF 59
GKA VTP ++K+++ + EAE++ +K+ A +T+G F VK++ G+ +F
Sbjct: 37 FGKAVPVTPAVMKQVEHRRAK-EAERQAALKQAALDFRTALDTIGRFTVKKQTGEDNVLF 95
Query: 60 GSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
G+VT DV + I+ ++++D++ + +PEI TG+Y +KLH EVTA I L V +
Sbjct: 96 GTVTNGDVAEAIQDATKKEIDRRDIVVPEIHRTGKYSVTVKLHSEVTAEINLEVVS 151
>sp|Q46IB6|RL9_PROMT 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain NATL2A)
GN=rplI PE=3 SV=1
Length = 152
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 3 KAQIVTPLLLKEMKMEEERIEAEKKRVK-EEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
KA VTP +LK+++ + +AEK+ K +EA T+G F VK++ G+ +FG+
Sbjct: 39 KALPVTPTVLKQVEHRRAK-QAEKEAAKKQEAIDFQTALTTIGRFTVKKQVGEDGVLFGT 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
VT DV +++K ++D+D++ + +PEI G+Y Q+KLH EV A I L V
Sbjct: 98 VTNGDVAEVVKEATKKDIDRRDISIPEIHGVGKYKVQIKLHNEVNAEINLEV 149
>sp|A2C5D9|RL9_PROM1 50S ribosomal protein L9 OS=Prochlorococcus marinus (strain NATL1A)
GN=rplI PE=3 SV=1
Length = 152
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 3 KAQIVTPLLLKEMKMEEERIEAEKKRVK-EEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
KA VTP +LK+++ + +AEK+ K +EA T+G F VK++ G+ +FG+
Sbjct: 39 KALPVTPTVLKQVEHRRAK-QAEKEAAKKQEAIDFQTALTTIGRFTVKKQVGEDGVLFGT 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
VT DV +++K ++D+D++ + +PEI G+Y Q+KLH EV A I L V
Sbjct: 98 VTNGDVAEVVKEATKKDIDRRDISVPEIHGVGKYKVQIKLHNEVNAEINLEV 149
>sp|Q5N1S9|RL9_SYNP6 50S ribosomal protein L9 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplI PE=3 SV=1
Length = 152
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
G AQ VT +LK+++ R A KE A ET+G F +K++ G+G+ IFG+
Sbjct: 38 GLAQPVTRGVLKQVEFRRAREAARLVAEKEAAVARKTALETIGRFVIKKQAGEGESIFGT 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
VT DV + I+ ++VD++ + LPEI + G Y Q+KLH +VTA + + V A
Sbjct: 98 VTNGDVAEAIQVATTQEVDRREITLPEIHKLGFYKVQVKLHADVTAEVEIQVAA 151
>sp|Q31K30|RL9_SYNE7 50S ribosomal protein L9 OS=Synechococcus elongatus (strain PCC
7942) GN=rplI PE=3 SV=1
Length = 152
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
G AQ VT +LK+++ R A KE A ET+G F +K++ G+G+ IFG+
Sbjct: 38 GLAQPVTRGVLKQVEFRRAREAARLVAEKEAAVARKTALETIGRFVIKKQAGEGESIFGT 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
VT DV + I+ ++VD++ + LPEI + G Y Q+KLH +VTA + + V A
Sbjct: 98 VTNGDVAEAIQVATTQEVDRREITLPEIHKLGFYKVQVKLHADVTAEVEIQVAA 151
>sp|B0CAV7|RL9_ACAM1 50S ribosomal protein L9 OS=Acaryochloris marina (strain MBIC
11017) GN=rplI PE=3 SV=1
Length = 152
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKR---VKEEAQQLALIFETVGAFKVKRKGGKGKQI 58
G A TP +LK++ E R E KR +K+EA + + +T+G F++++K G+ +
Sbjct: 38 GIAYRATPGVLKQI---EHRKAEELKRLEGIKDEAAKQKVALQTIGTFRIEQKAGEEDML 94
Query: 59 FGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNV 113
FG VT+ DV ++I ++DK+ +D+P+IR+ G Y +KLHPEV A +++ V
Sbjct: 95 FGRVTSPDVAELIANISGFEIDKRGIDIPDIRKLGTYSVDIKLHPEVIATVKVEV 149
>sp|Q2JMI4|RL9_SYNJB 50S ribosomal protein L9 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplI PE=3 SV=1
Length = 149
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 7 VTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQD 66
VTP +LKE ++ E+ A K +++A+ ET+G F +++K G+ +FG VT D
Sbjct: 39 VTPGILKEQQVRLEQEAARKLAERQQAENYKTALETIGRFVIRKKVGEHDLLFGQVTTSD 98
Query: 67 VVDIIKAQLQRDVDKKIVDLP-EIRETGEYIAQLKLHPEVTARIRLNV 113
+ +++ A D+D++ + L EI++TG Y Q+KLHPEVTA +R+ V
Sbjct: 99 IAEVVLATSGLDIDRRNILLNEEIKKTGVYPVQVKLHPEVTATLRIQV 146
>sp|Q115S4|RL9_TRIEI 50S ribosomal protein L9 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplI PE=3 SV=1
Length = 152
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 69/109 (63%)
Query: 8 TPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDV 67
TP +LK+++ +E+ + +K+ A ETVG FK+ ++ G+ IFG+VT +++
Sbjct: 44 TPGVLKQVERRQEQERQRQIELKQGALAQKTALETVGRFKIAKQVGENDAIFGTVTDREL 103
Query: 68 VDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
V++IK +++D++ V LPEI + G Y A++KLHPEV A + + V +
Sbjct: 104 VEVIKESTGQEIDRRGVTLPEISKIGFYKAEIKLHPEVIAEVEIQVVGH 152
>sp|P0A499|RL9_THEEB 50S ribosomal protein L9 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplI PE=3 SV=1
Length = 152
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
G A+ TP L+ ++ +E+ +K A++ E + + G+ +FGS
Sbjct: 38 GIAEPATPSALRRVERLQEKERQRLAALKSIAEKQKATLEKLATITISMPVGEKDMLFGS 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
VT QDV D I+A +D++ + LPEIR+ G Y A++KLHPEVT ++ + V A+
Sbjct: 98 VTPQDVADAIQAITGETIDRREMILPEIRKLGTYTAEIKLHPEVTVKLNIQVVAD 152
>sp|P0A4A0|RL9_SYNEL 50S ribosomal protein L9 OS=Synechococcus elongatus GN=rplI PE=3
SV=1
Length = 152
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 2 GKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGS 61
G A+ TP L+ ++ +E+ +K A++ E + + G+ +FGS
Sbjct: 38 GIAEPATPSALRRVERLQEKERQRLAALKSIAEKQKATLEKLATITISMPVGEKDMLFGS 97
Query: 62 VTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 116
VT QDV D I+A +D++ + LPEIR+ G Y A++KLHPEVT ++ + V A+
Sbjct: 98 VTPQDVADAIQAITGETIDRREMILPEIRKLGTYTAEIKLHPEVTVKLNIQVVAD 152
>sp|Q1XDF2|RK9_PORYE 50S ribosomal protein L9, chloroplastic OS=Porphyra yezoensis
GN=rpl9 PE=3 SV=1
Length = 155
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%)
Query: 4 AQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVT 63
A + T +LK+ K E + K KE A+++ + E + F V +K G G IFGSVT
Sbjct: 41 AAVATNGILKQQKFYAAIREEKLKTAKENAKKVKQLLEEIQRFSVSKKTGDGHNIFGSVT 100
Query: 64 AQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVF 114
+++ IIK D++K+ + LP+++ G Y ++KL +VTA I+L V
Sbjct: 101 EKEISQIIKNTTNIDIEKQSISLPDVKTIGIYDVEIKLLHQVTANIKLQVL 151
>sp|Q3MGD1|RL9_ANAVT 50S ribosomal protein L9 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplI PE=3 SV=1
Length = 152
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%)
Query: 40 FETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQL 99
E VG+ K+ ++ G+ + IFG+VT+QDV D I+A ++VD++ + +P+I + G Y A++
Sbjct: 76 LEKVGSLKIAKQVGENEAIFGTVTSQDVADAIQAATSQEVDRRGITIPDIGKLGTYKAEI 135
Query: 100 KLHPEVTARIRLNVFAN 116
KL +VTA+I + V A+
Sbjct: 136 KLFSDVTAQIDIEVVAS 152
>sp|Q8YZA0|RL9_NOSS1 50S ribosomal protein L9 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplI PE=3 SV=1
Length = 152
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%)
Query: 40 FETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQL 99
E VG+ K+ ++ G+ + IFG+VT+QDV D I+A ++VD++ + +P+I + G Y A++
Sbjct: 76 LEKVGSLKIAKQVGENEAIFGTVTSQDVADAIQAATSQEVDRRGITIPDIGKLGTYKAEI 135
Query: 100 KLHPEVTARIRLNVFAN 116
KL +VTA+I + V A+
Sbjct: 136 KLFSDVTAQIDIEVVAS 152
>sp|B0JQ94|RL9_MICAN 50S ribosomal protein L9 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplI PE=3 SV=1
Length = 152
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 15 MKMEEERIEAEKKRV---KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDII 71
+K E R E E++R+ K+EA+ E + + + ++ G+ + IFG+VT+QDV +I
Sbjct: 48 IKQAEFRKEKERQRLLAEKQEAETRKTAIEKLSPYSIPKQVGENEAIFGTVTSQDVATVI 107
Query: 72 KAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFA 115
+ ++D++ + +P+I + G Y Q+KLHPEV+A I + V A
Sbjct: 108 LENAKLEIDRRGITVPDIGQLGVYKVQVKLHPEVSADIEIKVIA 151
>sp|P51334|RK9_PORPU 50S ribosomal protein L9, chloroplastic OS=Porphyra purpurea
GN=rpl9 PE=3 SV=1
Length = 155
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%)
Query: 30 KEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 89
KE A++ + E + F + +K G G+ IFGSVT +++ IIK D+DK+ + +PEI
Sbjct: 67 KENARKTQQLLEEIQKFSISKKTGDGETIFGSVTEKEISQIIKNTTNVDIDKQNILIPEI 126
Query: 90 RETGEYIAQLKLHPEVTARIRLNVF 114
+ G Y ++KL +VTA I+L V
Sbjct: 127 KTIGLYNIEIKLFNQVTANIQLQVL 151
>sp|B2IVH8|RL9_NOSP7 50S ribosomal protein L9 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rplI PE=3 SV=1
Length = 152
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 51/77 (66%)
Query: 40 FETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQL 99
E VG+ + ++ G+ + IFG++T QDV D IKA ++VD++ + +P+I G Y A++
Sbjct: 76 LEKVGSLTIAKQVGENEAIFGTITTQDVADAIKAATGQEVDRRGITIPDINHLGTYQAEI 135
Query: 100 KLHPEVTARIRLNVFAN 116
KL+ +V A++ + V A+
Sbjct: 136 KLYSDVAAQVDIQVVAS 152
>sp|A3DHN0|RL9_CLOTH 50S ribosomal protein L9 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplI PE=3 SV=1
Length = 148
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Query: 18 EEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQR 77
E+ R E E + KE A++L I T+ K K G+ ++FGS+T++DV D +K Q
Sbjct: 54 EKNRKERELAQAKELAEKLKGIVVTL-----KAKAGENGKLFGSMTSKDVSDYLKKQHNL 108
Query: 78 DVDKKIVDLPE-IRETGEYIAQLKLHPEVTARIRLNV 113
D+DKK + LPE ++ G Y A++KL+P V+A++ + +
Sbjct: 109 DIDKKKISLPESMKSLGTYEAEVKLYPGVSAKLTVKI 145
>sp|B1KU91|RL9_CLOBM 50S ribosomal protein L9 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplI PE=3 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 31 EEAQQLA--LIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 88
EEAQ+LA L+ + + FKVK G+ ++FGS+T++D+ + +K Q D+DKK +
Sbjct: 63 EEAQKLAKSLMGKEI-KFKVKI--GENGRLFGSITSKDISEKLKEQYNMDIDKKKIVAET 119
Query: 89 IRETGEYIAQLKLHPEVTARIRLNVF 114
IR+TG Y A++K++PEV+ +++++V
Sbjct: 120 IRQTGVYEAEIKIYPEVSTKVKVSVL 145
>sp|A7GJL8|RL9_CLOBL 50S ribosomal protein L9 OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=rplI PE=3 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 31 EEAQQLA--LIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 88
EEAQ+LA L+ + + FKVK G+ ++FGS+T++D+ + +K Q D+DKK +
Sbjct: 63 EEAQKLAKSLMGKEI-KFKVKI--GENGRLFGSITSKDISEKLKEQYNMDIDKKKIVAET 119
Query: 89 IRETGEYIAQLKLHPEVTARIRLNVF 114
IR+TG Y A++K++PEV+ +++++V
Sbjct: 120 IRQTGVYEAEIKIYPEVSTKVKVSVL 145
>sp|B1IHP8|RL9_CLOBK 50S ribosomal protein L9 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplI PE=3 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 31 EEAQQLA--LIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 88
EEAQ+LA L+ + + FKVK G+ ++FGS+T++D+ + +K Q D+DKK +
Sbjct: 63 EEAQKLAKSLMGKEI-KFKVKI--GENGRLFGSITSKDISEKLKEQYNMDIDKKKIVAET 119
Query: 89 IRETGEYIAQLKLHPEVTARIRLNVF 114
IR+TG Y A++K++PEV+ +++++V
Sbjct: 120 IRQTGVYEAEIKIYPEVSTKVKVSVL 145
>sp|C1FP10|RL9_CLOBJ 50S ribosomal protein L9 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplI PE=3 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 31 EEAQQLA--LIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 88
EEAQ+LA L+ + + FKVK G+ ++FGS+T++D+ + +K Q D+DKK +
Sbjct: 63 EEAQKLAKSLMGKEI-KFKVKI--GENGRLFGSITSKDISEKLKEQYNMDIDKKKIVAET 119
Query: 89 IRETGEYIAQLKLHPEVTARIRLNVF 114
IR+TG Y A++K++PEV+ +++++V
Sbjct: 120 IRQTGVYEAEIKIYPEVSTKVKVSVL 145
>sp|C3KWH4|RL9_CLOB6 50S ribosomal protein L9 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplI PE=3 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 31 EEAQQLA--LIFETVGAFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPE 88
EEAQ+LA L+ + + FKVK G+ ++FGS+T++D+ + +K Q D+DKK +
Sbjct: 63 EEAQKLAKSLMGKEI-KFKVKI--GENGRLFGSITSKDISEKLKEQYNMDIDKKKIVAET 119
Query: 89 IRETGEYIAQLKLHPEVTARIRLNVF 114
IR+TG Y A++K++PEV+ +++++V
Sbjct: 120 IRQTGVYEAEIKIYPEVSTKVKVSVL 145
>sp|A4T4P0|RL9_MYCGI 50S ribosomal protein L9 OS=Mycobacterium gilvum (strain PYR-GCK)
GN=rplI PE=3 SV=1
Length = 151
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 31 EEAQQLALIFETVGA--FKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLP- 87
E A++L E + + VK G GK +FGSVTA DVV IK +++K+ VDLP
Sbjct: 63 EHARELKTAIEALESVELSVKTAGDSGK-LFGSVTAADVVSAIKKAGGPNLEKRTVDLPK 121
Query: 88 -EIRETGEYIAQLKLHPEVTARIRLNVFAN 116
I+ TG + ++LHP+V A + LNV A
Sbjct: 122 AHIKSTGTHPITVRLHPDVNAALSLNVVAG 151
>sp|Q97CX9|RL9_CLOAB 50S ribosomal protein L9 OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=rplI PE=3 SV=1
Length = 147
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 31 EEAQQLALIFETVG-AFKVKRKGGKGKQIFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEI 89
EEAQ+LA E G K+ K G+ ++FG++T++D+ IK Q D+DKK V+ I
Sbjct: 63 EEAQKLA--NELKGKVLKLSAKAGENGRLFGAITSKDIAAEIKKQFNVDIDKKKVNSETI 120
Query: 90 RETGEYIAQLKLHPEVTARIRL 111
R+ G Y +LKL+PE++ +I +
Sbjct: 121 RKLGNYEIELKLYPEISTKINV 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,431,561
Number of Sequences: 539616
Number of extensions: 1522409
Number of successful extensions: 10460
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 9584
Number of HSP's gapped (non-prelim): 885
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)