BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033591
(115 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
+ED P M EK+ E F+ EL GF LL D ++ LIT ESL++NS +LG++ MS E+
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 70 MLREGDLDGDGALNEMEFCTLMFRLSPGLMKNSTNLFLEALN 111
M+REGDLDGDGALN+ EFC LM RLSP +M+++ +AL
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALT 123
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 6 SGVV-FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
SG + FE+F M K+G +E+ FRL D++ G I+F++LK+ + LG ++M+D
Sbjct: 58 SGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTD 116
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLMFRLS 95
EEL M+ E D DGDG +NE EF +M + S
Sbjct: 117 EELQEMIDEADRDGDGEVNEEEFFRIMKKTS 147
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QE+ F L + G I + LK LG + EE+ M+ + D DG G ++ EF
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK-EEIKKMIADIDKDGSGTIDFEEF 66
Query: 88 CTLM 91
+M
Sbjct: 67 LQMM 70
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
F DF M +K+ + +E+ F+L D++ G I+F++LK+ + LG ++++DEEL
Sbjct: 3 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 61
Query: 70 MLREGDLDGDGALNEMEFCTLMFRLS 95
M+ E D DGDG ++E EF +M + S
Sbjct: 62 MIDEADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
F DF M +K+ + +E+ F+L D++ G I+F++LK+ + LG ++++DEEL
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 119
Query: 70 MLREGDLDGDGALNEMEFCTLMFR 93
M+ E D DGDG ++E EF +M +
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIMKK 143
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QE+ F L + G I + LK LG + EE+ M+ E D +G G +N +F
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKK-EEIKKMISEIDKEGTGKMNFGDF 64
Query: 88 CTLM 91
T+M
Sbjct: 65 LTVM 68
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
++DF+ M EK+ + E+ F+L D+ G I+ ++L++ + LG + ++DEEL
Sbjct: 78 YDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 70 MLREGDLDGDGALNEMEFCTL 90
M+ E DLDGDG +NE EF +
Sbjct: 137 MIEEFDLDGDGEINENEFIAI 157
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 6 SGVV-FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
SG + FE+F M K+G +E+ FRL D++ G IT + L++ + LG +++++
Sbjct: 78 SGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTE 136
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLMFRLS 95
EEL M+ E D + D ++E EF +M + S
Sbjct: 137 EELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QE+ F L + G I + LK LG + EE+ M+ E D DG G ++ EF
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK-EEIKKMISEIDKDGSGTIDFEEF 86
Query: 88 CTLM 91
T+M
Sbjct: 87 LTMM 90
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 18 VEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLD 77
+K+ + +E+ F+L D++ G I+F++LK+ + LG ++++DEEL M+ E D D
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRD 59
Query: 78 GDGALNEMEFCTLMFRLS 95
GDG ++E EF +M + S
Sbjct: 60 GDGEVSEQEFLRIMKKTS 77
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
F DF +K + +E+ F+L D++ G I+F++LK+ + LG ++++DEEL
Sbjct: 86 FGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 144
Query: 70 MLREGDLDGDGALNEMEFCTLMFRLS 95
+ E D DGDG ++E EF + + S
Sbjct: 145 XIDEADRDGDGEVSEQEFLRIXKKTS 170
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 10 FEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMC 69
++DF+ EK+ + E+ F+L D+ G I+ ++L++ + LG + ++DEEL
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRA 136
Query: 70 MLREGDLDGDGALNEMEFCTL 90
+ E DLDGDG +NE EF +
Sbjct: 137 XIEEFDLDGDGEINENEFIAI 157
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 117 LTDEEVDEMIRESDIDGDGQVNYEEFVTMM 146
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F++F M +K+ +EL F++ + G I+ L+ LG +
Sbjct: 57 ADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLMFRL 94
++DEE+ M++E DLDGDG +N EF +M +
Sbjct: 116 LTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 43 GLITFESLKKNSALLGL-QDMSDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
G IT E L + + L Q+ ++EEL M+ E D DG+G + EF +LM +
Sbjct: 25 GCITVEELA--TVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +EL FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F LM R
Sbjct: 69 FLNLMAR 75
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 324 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 382
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 383 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 335 FLTMMAR 341
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 324 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 382
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 383 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 335 FLTMMAR 341
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 369 FLTMMAR 375
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 89 TLMFR 93
T+M R
Sbjct: 71 TMMAR 75
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 321 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 379
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 380 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 331
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 332 FLTMMAR 338
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 369 FLTMMAR 375
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +EL FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
E + E F L + G IT + L LG Q+ ++ EL M+ E D DG+G +
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTI 64
Query: 83 NEMEFCTLMFR 93
+ EF LM R
Sbjct: 65 DFPEFLNLMAR 75
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 359 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 417
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 369
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 370 FLTMMAR 376
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 369 FLTMMAR 375
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 54 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 112
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 113 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 65 FLTMMAR 71
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 113
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 89 TLMFR 93
T+M R
Sbjct: 68 TMMAR 72
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 113
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 89 TLMFR 93
T+M R
Sbjct: 68 TMMAR 72
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 56 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 114
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 115 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 89 TLMFR 93
T+M R
Sbjct: 69 TMMAR 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 113
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 66 FLTMMAR 72
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 119
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 120 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 AMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGD 75
AM ++L E + E F L + G IT + L LG Q+ ++ EL M+ E D
Sbjct: 3 AMADQLTEEQ-IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVD 60
Query: 76 LDGDGALNEMEFCTLMFR 93
DG+G ++ EF T+M R
Sbjct: 61 ADGNGTIDFPEFLTMMAR 78
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 89 TLMFR 93
T+M R
Sbjct: 71 TMMAR 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 53 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 111
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 112 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 141
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 64 FLTMMAR 70
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 89 TLMFR 93
T+M R
Sbjct: 71 TMMAR 75
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 89 TLMFR 93
T+M R
Sbjct: 71 TMMAR 75
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 59 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 117
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 118 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 AMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGD 75
+M ++L E + E F L + G IT + L LG Q+ ++ EL M+ E D
Sbjct: 1 SMADQLTEEQ-IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVD 58
Query: 76 LDGDGALNEMEFCTLMFR 93
DG+G ++ EF T+M R
Sbjct: 59 ADGNGTIDFPEFLTMMAR 76
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 63 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 121
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 122 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 89 TLMFR 93
T+M R
Sbjct: 76 TMMAR 80
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 89 TLMFR 93
T+M R
Sbjct: 70 TMMAR 74
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EX 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EX 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +EL FR+ + G I+ L+ LG +
Sbjct: 54 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EK 112
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 113 LTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 87 FCTLMFR 93
F LM R
Sbjct: 65 FLNLMAR 71
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +EL FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F LM R
Sbjct: 68 FLNLMAR 74
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ + +EL F++ + GLI+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++D+E+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F +LM R
Sbjct: 68 FLSLMAR 74
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ + +EL F++ + GLI+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++D+E+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F +LM R
Sbjct: 68 FLSLMAR 74
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ + +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKM--KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EK 113
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF T+M
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYEEFVTMM 143
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFRLSPGLMKNSTNLFLEALNV 112
F T+M R MK+S EA V
Sbjct: 68 FLTMMAR----KMKDSEEEIREAFRV 89
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 357 ADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 415
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 416 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 368 FLTMMAR 374
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 357 ADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 415
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 416 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 368 FLTMMAR 374
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 368
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 369 FLTMMAR 375
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 357 ADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 415
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 416 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 368 FLTMMAR 374
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ ++L FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F LM R
Sbjct: 68 FLNLMAR 74
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 89 TLMFR 93
T+M R
Sbjct: 70 TMMAR 74
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE ++DGDG +N EF +M
Sbjct: 116 LTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFC 88
E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 89 TLMFR 93
T+M R
Sbjct: 70 TMMAR 74
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M + +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 87 FCTLMFRL 94
F T+M R
Sbjct: 369 FLTMMARW 376
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A + + F +F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 349 ADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 407
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE D+DGDG +N EF +M
Sbjct: 408 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 301 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 359
Query: 87 FCTLMFR 93
F +M R
Sbjct: 360 FLIMMAR 366
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F F M K+ +E+ FR+ + G I+ L+ LG +
Sbjct: 358 ADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG-EK 416
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE +DGDG +N +F +M
Sbjct: 417 LTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E DG+G ++ +
Sbjct: 310 IAEFKEAFSLFDKDGDGGITTKQLGTVMRSLG-QNPTEAELQDMINEVGADGNGTIDFPQ 368
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 369 FLTMMAR 375
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F M K+ + +E+ FR+ + G I+ L+ LG +
Sbjct: 53 ADGNGTIDFPEFLTMMARKM-KDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EK 110
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ M+RE ++DGDG +N EF +M
Sbjct: 111 LTDEEVDEMIREANIDGDGQVNYEEFVQMM 140
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 64 FLTMMAR 70
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+EL FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 88 CTLM 91
+M
Sbjct: 63 VKVM 66
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 4 ANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMS 63
N V F +F M K+ +E+ FR+ + G ++ L+ LG + +S
Sbjct: 59 GNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG-EKLS 117
Query: 64 DEELMCMLREGDLDGDGALNEMEFCTLM 91
DEE+ M+R D DGDG +N EF ++
Sbjct: 118 DEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F K +E+ FR+ + G I+ L+ LG +
Sbjct: 58 ADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EK 116
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFC 88
++DEE+ +RE D+DGDG +N EF
Sbjct: 117 LTDEEVDQXIREADIDGDGQVNYEEFV 143
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL + E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T R
Sbjct: 69 FLTXXAR 75
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 88 CTLM 91
+M
Sbjct: 61 VQMM 64
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 22 GAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGA 81
G +E+ FRL D++ G IT + L++ + LG +++++EEL M+ E D + D
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNE 61
Query: 82 LNEMEFCTLMFRLS 95
++E EF +M + S
Sbjct: 62 IDEDEFIRIMKKTS 75
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
A +++L FR + G IT + L++ A LG Q + EEL M+RE D+D DG +
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRV 59
Query: 83 NEMEFCTLM 91
N EF ++
Sbjct: 60 NYEEFARML 68
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 88 CTLM 91
+M
Sbjct: 64 VQMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 88 CTLM 91
+M
Sbjct: 64 VQMM 67
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F K +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFC 88
++DEE+ +RE D+DGDG +N EF
Sbjct: 116 LTDEEVDEXIREADIDGDGQVNYEEFV 142
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL + E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T R
Sbjct: 68 FLTXXAR 74
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 88 CTLM 91
+M
Sbjct: 65 VQMM 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 88 CTLM 91
+M
Sbjct: 67 VQMM 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N EF
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 88 CTLM 91
+M
Sbjct: 68 VQMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+EL F++ + G I+ L+ LG + ++DEE+ M++E DLDGDG +N EF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 88 CTLM 91
+M
Sbjct: 63 VKMM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+EL F++ + G I+ L+ LG + ++DEE+ M++E DLDGDG +N EF
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 88 CTLM 91
+M
Sbjct: 68 VKMM 71
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 13 FFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLR 72
+F ++++ +E +E+ FR+ + G I+ L+ LG + ++DEE+ M+R
Sbjct: 17 YFQSLMKDTDSE---EEIREAFRVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIR 72
Query: 73 EGDLDGDGALNEMEFCTLM 91
E D+DGDG +N EF +M
Sbjct: 73 EADIDGDGQVNYEEFVQMM 91
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ FR+ + G I+ L+ LG + ++DEE+ M+RE D+DGDG +N +F
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 88 CTLM 91
+M
Sbjct: 66 VQMM 69
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+EL F++ + GLI+ L+ LG + ++D+E+ M+RE D+DGDG +N EF
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINYEEF 66
Query: 88 CTLM 91
+M
Sbjct: 67 VRMM 70
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
A N + F +F +E+ FR+ + G I+ L+ LG +
Sbjct: 57 ADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EK 115
Query: 62 MSDEELMCMLREGDLDGDGALNEMEF 87
++DEE+ +RE D+DGDG +N EF
Sbjct: 116 LTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG + ++ EL + E D DG+G +N E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGC-NPTEAELQDXINEVDADGNGTINFPE 67
Query: 87 FCTLMFR 93
F T R
Sbjct: 68 FLTXXAR 74
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 5 NSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
N + F +F M +++ +E+ F++ + G I+ L+ LG + ++D
Sbjct: 60 NGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTD 118
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLM 91
EE+ M+RE D DGDG +N EF ++
Sbjct: 119 EEIDEMIREADFDGDGMINYEEFVWMI 145
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+EL FR+L E KG+I + L+ LG +++++E+ M+ E D DG G ++ EF
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 88 CTLM 91
LM
Sbjct: 66 KCLM 69
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 5 NSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
N + F +F M +L + QEL F++ GLI+ LK +G + ++D
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTD 118
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLMFR 93
E+ MLRE DG G +N +F L+ +
Sbjct: 119 AEVDDMLREVS-DGSGEINIQQFAALLSK 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 5 NSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
N + F +F M +L + QEL F++ GLI+ LK +G + ++D
Sbjct: 61 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTD 119
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLMFRLSP 96
E+ MLRE DG G +N +F L+ + S
Sbjct: 120 AEVDDMLREVS-DGSGEINIQQFAALLSKGSS 150
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 12 DFFPAMVEKLGAEGFMQELSNGFRL-LMDEDKGLITFESLKKNSALLGLQDMSDEELMCM 70
D + A VE+L E E F + + D + G I+ + L K +LG Q+ + EEL M
Sbjct: 3 DIYKAAVEQLTEEQ-KNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEM 60
Query: 71 LREGDLDGDGALNEMEFCTLMFR 93
+ E D DG G ++ EF +M R
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 5 NSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSD 64
N + F +F M +L QEL F++ GLI+ LK +G + ++D
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTD 119
Query: 65 EELMCMLREGDLDGDGALNEMEFCTLMFR 93
E+ MLRE DG G +N +F L+ +
Sbjct: 120 AEVDEMLREVS-DGSGEINIKQFAALLSK 147
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 12 DFFPAMVEKLGAEGFMQELSNGFRL-LMDEDKGLITFESLKKNSALLGLQDMSDEELMCM 70
D + A VE+L E E F + + D + G I+ + L K +LG Q+ + EEL M
Sbjct: 3 DIYKAAVEQLTDEQ-KNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEM 60
Query: 71 LREGDLDGDGALNEMEFCTLMFR 93
+ E D DG G ++ EF +M R
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 19 EKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDG 78
E++ E QEL FRL E G I+ + +++ A L + +S E+L M+ E D DG
Sbjct: 82 EEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD-ETLSSEDLDAMIDEIDADG 140
Query: 79 DGALNEMEFCTLM 91
G ++ EF +M
Sbjct: 141 SGTVDFEEFMGVM 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 8 VVFEDFFPAMVEKLGAEGF----MQELSNGFRLLMDEDKGLITFESLKKN-SALLGLQDM 62
V F+DF M KL AE ++EL + FR G I+ L++ ALLG Q +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ-V 122
Query: 63 SDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
++ ++R+ DL+GDG ++ EF +M R
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DGDG ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 12 DFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDEE 66
D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + EE
Sbjct: 3 DIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEE 56
Query: 67 LMCMLREGDLDGDGALNEMEFCTLMFR 93
L M+ E D DG G ++ EF +M R
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 12 DFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDEE 66
D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + EE
Sbjct: 3 DIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEE 56
Query: 67 LMCMLREGDLDGDGALNEMEFCTLMFR 93
L M+ E D DG G ++ EF +M R
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVEKLGAEG---FMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG V F++F MV + + +ELS+ FR+ G I E LK G +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ET 127
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++++++ ++++GD + DG ++ EF M
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFRLSPGLMKNST 103
EL M+ E D DG G ++ EF +M R K T
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKT 93
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVE--KLGAEGFMQE-LSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG V F++F MV K ++G +E LS+ FR+ G I E LK G +
Sbjct: 69 SGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ET 127
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++++++ ++++GD + DG ++ EF M
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVEKLGAEG---FMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG V F++F MV + + +ELS+ FR+ G I + LK G +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG-ET 127
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++++++ ++++GD + DG ++ EF M
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ EF +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVEKLGAEG---FMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG V F++F MV + + +ELS+ FR+ G I E LK G +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ET 127
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++++++ ++++GD + DG ++ EF M
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 69 FLTMMAR 75
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LGL + ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLYDKDGDGTITTKELGTVMRSLGL-NPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFRL 94
F T+M R+
Sbjct: 68 FLTMMARI 75
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 8 VVFEDFFPAMVEKLGAEGF----MQELSNGFRLLMDEDKGLITFESLKKN-SALLGLQDM 62
V F+DF M KL AE ++EL + FR G I+ L++ LLG Q +
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ-V 136
Query: 63 SDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
++ ++R+ DL+GDG ++ EF +M R
Sbjct: 137 GHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 8 VVFEDFFPAMVEKLGAEGF----MQELSNGFRLLMDEDKGLITFESLKKN-SALLGLQDM 62
V F+DF M KL AE ++EL + FR G I+ L++ LLG Q +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ-V 122
Query: 63 SDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
++ ++R+ DL+GDG ++ EF +M R
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ E+ +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEWLVMMVR 83
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 1 MASANSGVVFEDFFPAMVEKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQ 60
M+ A + F F EKL + N F +E G I + L++ +G +
Sbjct: 49 MSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR 108
Query: 61 DMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+DEE+ M RE +D G N +EF ++
Sbjct: 109 -FTDEEVDEMYREAPIDKKGNFNYVEFTRIL 138
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 32.0 bits (71), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 55 ALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFRLSPGLMKNSTNLF 106
AL L S +E+ M+ E D DGDG ++ EF + +PGLMK+ +F
Sbjct: 27 ALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFC-NANPGLMKDVAKVF 77
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F T+M R
Sbjct: 68 FLTMMAR 74
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 55 ALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFRLSPGLMKNSTNLF 106
AL L S +E+ M+ E D DGDG ++ EF + +PGLMK+ +F
Sbjct: 28 ALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFC-NANPGLMKDVAKVF 78
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K +LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG G ++ E+ +M R
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEWLVMMAR 83
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 58 GLQDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
G + ++D E L+ GD DGDGA+ E+ L+
Sbjct: 74 GARALTDAETKAFLKAGDSDGDGAIGVDEWAALV 107
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QEL FRL E G I+ + +++ A L + +S E+L M+ E D DG G ++ EF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELD-ETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 88 CTLM 91
+M
Sbjct: 62 MGVM 65
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDE-ELMCMLREGDLDGDGALNEM 85
++E+ F++ + G I+ + L +A+ L M +E EL +++ D+DGDG ++
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQEL--GTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 86 EFCTLM 91
EF TL+
Sbjct: 93 EFVTLL 98
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L + G IT + L LG Q+ ++ EL M+ E D DG+G ++ E
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 87 FCTLMFR 93
F LM R
Sbjct: 68 FLNLMAR 74
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVEKLGAEG---FMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG + FE+F MV ++ + +EL+ FR+ G I E L + G +
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG-EH 125
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ ++++GD + DG ++ EF +M
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q + EEL ++ E D DG G +
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGTI 70
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 71 DFEEFLVMMVR 81
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+E+ F++ G+I F+ K +G + ++D E+ ++E D DG+G ++ EF
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 88 CTLMFRLSPGLMKNS 102
L+ + S +K S
Sbjct: 68 MDLI-KKSKNALKES 81
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QE+ F L + G I + LK LG + EE+ M+ E D DG G ++ EF
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEEF 88
Query: 88 CTLM 91
T+M
Sbjct: 89 LTMM 92
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 6 SGVV-FEDFFPAMVEKLGAEG---FMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQD 61
SG + FE+F MV ++ + +EL+ FR+ G I E L + G +
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG-EH 125
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++DEE+ ++++GD + DG ++ EF +M
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 43 GLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
G I+ + L +LG Q + EEL ++ E D DG G ++ EF +M R
Sbjct: 32 GDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 14 FPAMVEKLGAEGFMQELSNGFRLLMDEDK-GLITFESLKKNSALL--GLQDMSDEELMCM 70
+ A K G G + + +D+DK G I + LK + G + ++D E
Sbjct: 27 YKAFFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAF 86
Query: 71 LREGDLDGDGALNEMEFCTLM 91
L+ GD DGDGA+ E+ L+
Sbjct: 87 LKAGDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 14 FPAMVEKLGAEGFMQELSNGFRLLMDEDK-GLITFESLKKNSALL--GLQDMSDEELMCM 70
+ A K G G + + +D+DK G I + LK + G + ++D E
Sbjct: 26 YKAFFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAF 85
Query: 71 LREGDLDGDGALNEMEFCTLM 91
L+ GD DGDGA+ E+ L+
Sbjct: 86 LKAGDSDGDGAIGVEEWVALV 106
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 60 QDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+D+S +E ++ GD DGDG + EF TL+
Sbjct: 75 RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 55 ALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFRLSPGLMKNSTNLF 106
AL L ++ +E+ M+ E D DGDG ++ EF T R + GL+K+ +F
Sbjct: 34 ALKTLGSITPDEVKHMMAEIDTDGDGFISFQEF-TDFGRANRGLLKDVAKIF 84
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 60 QDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+D+S +E ++ GD DGDG + EF TL+
Sbjct: 75 RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 60 QDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+D+S +E ++ GD DGDG + EF TL+
Sbjct: 39 RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 70
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 61 DMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
D+S +E ++ GD DGDG + EF TL+
Sbjct: 76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 21 LGAEGFMQELSNGFRLLMDED-KGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGD 79
+ AE Q++++ R+ D G S + AL L ++ +E+ M+ E D DGD
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGD 60
Query: 80 GALNEMEFCTLMFRLSPGLMKNSTNLF 106
G ++ EF R + GL+K+ + +F
Sbjct: 61 GFISFDEFTDFA-RANRGLVKDVSKIF 86
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 0.89, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+ L F+ + G IT E L + L G+ ++ DE +L+E D + DG ++ EF
Sbjct: 397 ERLLAAFQQFDSDGSGKITNEELGR---LFGVTEVDDETWHQVLQECDKNNDGEVDFEEF 453
Query: 88 CTLMFRL 94
+M ++
Sbjct: 454 VEMMQKI 460
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
QE+ F L + G I + LK LG + EE+ M+ E D +G G +N +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDKEGTGKMNFGDF 89
Query: 88 CTLM 91
T+M
Sbjct: 90 LTVM 93
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 37 LMDED-KGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
L D+D G IT E L L Q+ ++EEL M+ E D DG+G + EF +LM +
Sbjct: 18 LFDKDGDGCITVEELATVIRSLD-QNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKN-SALLGLQDMSDEELMCMLREGDLDGDGALNEM 85
++EL + FR G I+ L++ LLG Q + ++ ++R+ DL+GDG ++
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ-VGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 86 EFCTLMFR 93
EF +M R
Sbjct: 65 EFVRMMSR 72
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 11 EDFFPAMVEKLGAEGFMQELSNGFRLLMD-----EDKGLITFESLKKNSALLGLQDMSDE 65
+D + A VE+L +E N F+ D + G I+ + L K LG Q+ + E
Sbjct: 2 DDIYKAAVEQL-----TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLG-QNPTPE 55
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL + E D DG G ++ EF R
Sbjct: 56 ELQEXIDEVDEDGSGTVDFDEFLVXXVR 83
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 2 ASANSGVVFEDFFPAMVEKLGAEGFMQE--LSNGFRLLMDEDKGLITFESLKKNSALLGL 59
++A+ + + DF A ++K + ++++ F+ + G I+ E LK+ + G
Sbjct: 104 SNASGQIHYTDFLAATIDK---QTYLKKEVCLIPFKFFDIDGNGKISVEELKR---IFGR 157
Query: 60 QDMS----DEELMCMLREGDLDGDGALNEMEFCTLMFR 93
D+ D+ + +L+E DL+GDG ++ EF +M +
Sbjct: 158 DDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 37 LMDED-KGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
L D+D G IT E L L Q+ ++EEL M+ E D DG+G + EF +LM +
Sbjct: 18 LFDKDGDGCITVEELATVIRSLD-QNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 60 QDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+D+S +E ++ GD DGDG + EF TL+
Sbjct: 76 RDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 6 SGVV-FEDFFPAMVE--KLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDM 62
SG + + +F A V KL E + L + F + G IT + +++ GL D+
Sbjct: 60 SGTIDYGEFIAATVHLNKLERE---ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI 116
Query: 63 SDEELMCMLREGDLDGDGALNEMEFCTLMFR 93
++ M++E D D DG ++ EF +M +
Sbjct: 117 HIDD---MIKEIDQDNDGQIDYGEFAAMMRK 144
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 34 FRLLMDEDKGLITFESLKKNSALLGL----QDMSDEELMCMLREGDLDGDGALNEMEFCT 89
F +L + G I E LK L G +D++D E +L GD D DG + EF
Sbjct: 47 FEILDKDQSGFIEEEELK--GVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAK 104
Query: 90 LM 91
++
Sbjct: 105 MV 106
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQD-MSDEELMCMLREGDLDGDGALNEME 86
+E+ + FR L E G I L++ LL L D ++ E+ +++E + GDGA+N
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQ--LLLNLGDALTSSEVEELMKEVSVSGDGAINYES 133
Query: 87 FCTLMFRLSP 96
F ++ P
Sbjct: 134 FVDMLVTGYP 143
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++D E L+ GD DGDG + EF L+
Sbjct: 78 LTDGETKTFLKAGDSDGDGKIGVDEFTALV 107
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ ++L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 QDMSDEELMCMLREGDLDGDGALNEMEFCTLM 91
+D+S +E ++ GD DG G + EF TL+
Sbjct: 75 RDLSAKETKTLMAAGDKDGSGKIEVEEFSTLV 106
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 43 GLITFESLKKNSALLGLQDMSDEE--LMCMLREGDLDGDGALNEMEFCTL 90
G I K +A + QD+SDE+ L + + D DGDG L + E T
Sbjct: 51 GEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTF 100
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 62
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 63 DFEEFLVMMVR 73
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 33 GFRLL-MDEDKGLITFESLKKNSALLGLQDMSDEELMCM----LREGDLDGDGALNEMEF 87
FRL +D+D+ + E L+ ++G+ ++SDE+L + ++E D DGD A++ EF
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
Query: 88 CTLM 91
++
Sbjct: 177 VKVL 180
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+ E F L E G IT E L+ G++ + M E D G+G + E
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVR-VEPAAFNEMFNEADATGNGKIQFPE 63
Query: 87 FCTLMFRLSPGLMKNSTN 104
F ++M R MK +T+
Sbjct: 64 FLSMMGR----RMKQTTS 77
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+Q+ F ++ G+I + L++ A +G ++ +EEL M++E G +N
Sbjct: 11 IQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTV 66
Query: 87 FCTL 90
F T+
Sbjct: 67 FLTM 70
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
MQEL F ++ + G I E LK + LG + D+EL ML+E G LN
Sbjct: 15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLG-RVPPDDELNAMLKE----CPGQLNFTA 69
Query: 87 FCTL 90
F TL
Sbjct: 70 FLTL 73
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 66 ELMCMLREGDLDGDGALNEMEFCTLMFR 93
EL M+ E D DG+G ++ EF T+M R
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMAR 29
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 29 ELSNGFRLLMDEDKGLITFESLKKNSALLGLQD-------MSDEELMCMLREGDLDGDGA 81
++ F ++ + G I + LK L LQ+ ++D E L+ GD DGDG
Sbjct: 42 DVKKAFAIIAQDKSGFIEEDELK-----LFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 82 LNEMEFCTLM 91
+ E+ L+
Sbjct: 97 IGVDEWTALV 106
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 33 GFRLL-MDEDKGLITFESLKKNSALLGLQDMSDEELMCM----LREGDLDGDGALNEMEF 87
FRL +D+D + E L+ ++G+ ++SDE+L + ++E D DGD A++ EF
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
Query: 88 CTLM 91
++
Sbjct: 177 VKVL 180
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 35/114 (30%)
Query: 9 VFEDFFPAMVEKLGAEGFMQELSNGFRLLMDED---KGLITFESL--KKNSALLGLQ--- 60
+ E FFP +++ GF++ L++ FR + DED + E L ++N Q
Sbjct: 66 IIESFFPDGSQRVDFPGFVRVLAH-FRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYD 124
Query: 61 -----DMSDEELMCMLR---------------------EGDLDGDGALNEMEFC 88
+S E++ +LR E D DGDGA++ +EF
Sbjct: 125 LDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++D E L+ GD DGDG + E+ L+
Sbjct: 77 LTDGETKTFLKAGDSDGDGKIGVDEWTALV 106
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 27 MQELSNGFRLLMDED-KGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEM 85
+++L + F L++DED KG IT E LKK GL+ + +L +L + D DG G ++
Sbjct: 51 VEKLKSTF-LVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYT 107
Query: 86 EFCT 89
EF
Sbjct: 108 EFIA 111
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 62 MSDEELMCMLREGDLDGDGALNEMEFCTLM 91
++D E L +GD DGDG + EF ++
Sbjct: 77 LTDAETKAFLADGDKDGDGMIGVDEFAAMI 106
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 43 GLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEFCTLMFRL 94
G IT E L + L G+ ++ DE +L+E D + DG ++ EF +M ++
Sbjct: 138 GKITNEELGR---LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+ELS+ FR+ G I E LK G + ++++++ ++++GD + DG ++ EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 88 CTLM 91
M
Sbjct: 64 LEFM 67
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 70
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 71 DFEEFLVMMVR 81
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 23 AEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGAL 82
+E + E F + + G I+ + L +LG Q+ + EEL ++ E D DG G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTI 73
Query: 83 NEMEFCTLMFR 93
+ EF +M R
Sbjct: 74 DFEEFLVMMVR 84
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+ELS+ FR+ G I E LK G + ++++++ ++++GD + DG ++ EF
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 88 CTLM 91
M
Sbjct: 66 LEFM 69
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+ELS+ FR+ G I E LK G + ++++++ ++++GD + DG ++ EF
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 88 CTLM 91
M
Sbjct: 69 LEFM 72
>pdb|1OSM|A Chain A, Osmoporin (Ompk36) From Klebsiella Pneumoniae
pdb|1OSM|B Chain B, Osmoporin (Ompk36) From Klebsiella Pneumoniae
pdb|1OSM|C Chain C, Osmoporin (Ompk36) From Klebsiella Pneumoniae
Length = 342
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 20/85 (23%)
Query: 5 NSGVVFE-----DFFPAMV-EKLGAEGFMQELSNGFRLLMDEDKGLITFESLKKNSALLG 58
N GVV++ D P + G++ F+Q +NG + T+ +NS G
Sbjct: 94 NYGVVYDVTSWTDVLPEFGGDTYGSDNFLQSRANG----------VATY----RNSDFFG 139
Query: 59 LQDMSDEELMCMLREGDLDGDGALN 83
L D + L + G + G+GA N
Sbjct: 140 LVDGLNFALQYQGKNGSVSGEGATN 164
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 QELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEMEF 87
+ELS+ FR+ G I E LK G + ++++++ ++++GD + DG ++ EF
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 88 CTLM 91
M
Sbjct: 74 LEFM 77
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 27 MQELSNGFRLLMDEDKGLITFESLKKNSALLGLQDMSDEELMCMLREGDLDGDGALNEME 86
+++ F ++ G+I + L++ A +G ++ +EEL M++E G +N
Sbjct: 6 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTV 61
Query: 87 FCTL 90
F T+
Sbjct: 62 FLTM 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,221,231
Number of Sequences: 62578
Number of extensions: 118990
Number of successful extensions: 675
Number of sequences better than 100.0: 189
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 332
length of query: 115
length of database: 14,973,337
effective HSP length: 78
effective length of query: 37
effective length of database: 10,092,253
effective search space: 373413361
effective search space used: 373413361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)