Query 033598
Match_columns 115
No_of_seqs 109 out of 1177
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 06:16:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033598.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033598hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tqx_A D-ribulose-5-phosphate 100.0 1E-32 3.6E-37 204.8 13.0 111 1-114 115-227 (227)
2 3inp_A D-ribulose-phosphate 3- 100.0 5.7E-32 2E-36 203.0 10.7 107 1-110 135-245 (246)
3 3ovp_A Ribulose-phosphate 3-ep 100.0 1.6E-31 5.5E-36 198.3 12.0 109 1-112 113-221 (228)
4 3ctl_A D-allulose-6-phosphate 100.0 1.2E-30 4.2E-35 194.0 10.1 107 1-110 107-219 (231)
5 3cu2_A Ribulose-5-phosphate 3- 100.0 8.9E-30 3E-34 190.1 9.9 104 1-108 127-236 (237)
6 1tqj_A Ribulose-phosphate 3-ep 99.9 1E-28 3.4E-33 183.0 6.4 108 1-111 113-224 (230)
7 1h1y_A D-ribulose-5-phosphate 99.9 1.7E-27 5.8E-32 175.4 12.0 112 1-115 114-228 (228)
8 1rpx_A Protein (ribulose-phosp 99.9 9.6E-24 3.3E-28 154.8 7.4 105 1-108 119-227 (230)
9 2fli_A Ribulose-phosphate 3-ep 99.9 3.7E-23 1.3E-27 150.1 10.3 106 1-109 110-219 (220)
10 3jr2_A Hexulose-6-phosphate sy 99.8 3.1E-20 1.1E-24 135.7 4.1 103 2-110 111-215 (218)
11 2czd_A Orotidine 5'-phosphate 99.8 4.5E-20 1.5E-24 134.0 1.7 103 4-109 101-206 (208)
12 3f4w_A Putative hexulose 6 pho 99.8 2.1E-18 7.3E-23 124.3 8.9 104 2-110 105-209 (211)
13 3ajx_A 3-hexulose-6-phosphate 99.7 8.2E-18 2.8E-22 120.9 5.8 99 2-107 105-205 (207)
14 2yyu_A Orotidine 5'-phosphate 99.7 2.9E-18 9.8E-23 127.8 -0.2 107 4-114 117-241 (246)
15 3o63_A Probable thiamine-phosp 99.7 1.5E-16 5E-21 118.9 8.6 100 8-110 141-241 (243)
16 3exr_A RMPD (hexulose-6-phosph 99.7 1.7E-16 5.7E-21 116.9 8.0 105 2-110 113-218 (221)
17 1q6o_A Humps, 3-keto-L-gulonat 99.7 2.3E-17 7.9E-22 120.2 3.2 99 2-110 108-213 (216)
18 1geq_A Tryptophan synthase alp 99.6 2.4E-16 8.1E-21 116.2 7.0 105 2-112 135-245 (248)
19 1eix_A Orotidine 5'-monophosph 99.6 1.2E-17 4E-22 124.5 -0.2 105 4-109 124-242 (245)
20 2tps_A Protein (thiamin phosph 99.6 8.6E-16 3E-20 111.4 9.5 104 6-112 120-224 (227)
21 1dbt_A Orotidine 5'-phosphate 99.6 1.8E-17 6.2E-22 122.9 0.1 106 4-111 116-237 (239)
22 1yad_A Regulatory protein TENI 99.6 3.3E-15 1.1E-19 108.6 12.0 105 2-112 112-216 (221)
23 1xi3_A Thiamine phosphate pyro 99.6 1.7E-15 5.8E-20 108.8 10.3 100 8-111 114-213 (215)
24 1rd5_A Tryptophan synthase alp 99.5 2.3E-14 8E-19 106.8 9.9 104 2-109 145-255 (262)
25 1qop_A Tryptophan synthase alp 99.5 5.3E-14 1.8E-18 105.7 9.6 105 2-110 149-261 (268)
26 3nl6_A Thiamine biosynthetic b 99.5 4.6E-14 1.6E-18 115.5 8.9 103 3-110 111-231 (540)
27 2v82_A 2-dehydro-3-deoxy-6-pho 99.4 4.2E-13 1.4E-17 96.8 9.1 91 9-111 108-203 (212)
28 1yxy_A Putative N-acetylmannos 99.4 9.4E-13 3.2E-17 96.2 6.8 96 4-109 135-233 (234)
29 1wa3_A 2-keto-3-deoxy-6-phosph 99.3 5.3E-12 1.8E-16 90.4 8.8 65 46-111 136-203 (205)
30 1y0e_A Putative N-acetylmannos 99.3 1.1E-11 3.8E-16 89.7 9.5 94 6-108 123-221 (223)
31 2yw3_A 4-hydroxy-2-oxoglutarat 99.3 2.4E-11 8.1E-16 88.4 8.8 89 8-108 110-201 (207)
32 3ceu_A Thiamine phosphate pyro 99.3 3.8E-12 1.3E-16 92.3 4.5 77 24-100 106-184 (210)
33 3vnd_A TSA, tryptophan synthas 99.2 5.3E-11 1.8E-15 89.9 9.5 105 2-110 150-262 (267)
34 1vzw_A Phosphoribosyl isomeras 99.2 2.3E-11 7.8E-16 89.2 6.6 97 2-104 124-239 (244)
35 1thf_D HISF protein; thermophI 99.2 1.9E-10 6.4E-15 84.5 10.0 90 11-106 152-243 (253)
36 2zbt_A Pyridoxal biosynthesis 99.1 7E-11 2.4E-15 89.3 6.9 65 45-110 193-260 (297)
37 1h5y_A HISF; histidine biosynt 99.1 2.9E-10 9.9E-15 82.5 9.2 89 11-105 155-245 (253)
38 1xm3_A Thiazole biosynthesis p 99.1 6.3E-10 2.2E-14 83.4 9.4 85 24-112 146-231 (264)
39 1mxs_A KDPG aldolase; 2-keto-3 99.1 6.1E-10 2.1E-14 82.1 8.4 76 8-95 125-201 (225)
40 2y88_A Phosphoribosyl isomeras 99.0 3.4E-10 1.2E-14 82.7 6.4 85 11-101 150-239 (244)
41 1wbh_A KHG/KDPG aldolase; lyas 99.0 9.5E-10 3.2E-14 80.4 7.1 78 8-97 115-193 (214)
42 3qja_A IGPS, indole-3-glycerol 98.9 2.7E-09 9.2E-14 80.6 8.5 93 8-108 168-262 (272)
43 1vhc_A Putative KHG/KDPG aldol 98.9 6.4E-09 2.2E-13 76.5 10.1 74 9-94 117-191 (224)
44 3m47_A Orotidine 5'-phosphate 98.9 6.7E-11 2.3E-15 87.2 -0.9 84 27-112 140-226 (228)
45 4adt_A Pyridoxine biosynthetic 98.9 2.5E-09 8.6E-14 81.9 7.7 64 47-111 195-261 (297)
46 2h6r_A Triosephosphate isomera 98.9 1.8E-09 6.2E-14 78.9 5.7 82 25-107 131-218 (219)
47 2yzr_A Pyridoxal biosynthesis 98.8 9E-10 3.1E-14 85.3 2.6 81 29-110 210-293 (330)
48 3igs_A N-acetylmannosamine-6-p 98.8 3.6E-08 1.2E-12 72.7 10.2 94 8-111 135-230 (232)
49 1w8s_A FBP aldolase, fructose- 98.8 2.2E-08 7.4E-13 75.1 8.8 76 24-110 171-253 (263)
50 2ekc_A AQ_1548, tryptophan syn 98.8 2.1E-08 7.3E-13 74.9 8.7 99 7-110 154-258 (262)
51 3ve9_A Orotidine-5'-phosphate 98.8 1E-08 3.4E-13 75.2 6.7 62 50-112 141-204 (215)
52 2b7n_A Probable nicotinate-nuc 98.7 1.6E-08 5.4E-13 76.4 6.6 76 8-95 188-264 (273)
53 2gjl_A Hypothetical protein PA 98.7 6.6E-08 2.3E-12 73.9 9.7 84 8-96 124-209 (328)
54 2nv1_A Pyridoxal biosynthesis 98.7 1.6E-08 5.5E-13 76.8 6.1 64 46-110 194-260 (305)
55 1o4u_A Type II quinolic acid p 98.7 1.8E-08 6E-13 76.8 5.9 75 9-95 200-275 (285)
56 3o07_A Pyridoxine biosynthesis 98.7 9.6E-09 3.3E-13 78.1 4.4 65 46-111 185-252 (291)
57 3nav_A Tryptophan synthase alp 98.7 1.3E-07 4.5E-12 71.4 10.2 101 5-109 155-263 (271)
58 3q58_A N-acetylmannosamine-6-p 98.7 8.8E-08 3E-12 70.5 8.9 91 8-108 135-227 (229)
59 2jbm_A Nicotinate-nucleotide p 98.7 3E-08 1E-12 75.9 6.5 77 7-95 202-279 (299)
60 3tsm_A IGPS, indole-3-glycerol 98.7 1.4E-07 4.7E-12 71.4 9.9 91 8-106 175-267 (272)
61 1qpo_A Quinolinate acid phosph 98.7 6.8E-08 2.3E-12 73.5 7.8 73 13-95 204-276 (284)
62 1x1o_A Nicotinate-nucleotide p 98.6 9.3E-08 3.2E-12 72.8 7.3 77 2-95 198-275 (286)
63 3ru6_A Orotidine 5'-phosphate 98.6 8.5E-08 2.9E-12 73.6 7.0 59 52-110 183-252 (303)
64 2qjg_A Putative aldolase MJ040 98.6 1.3E-07 4.4E-12 70.2 7.7 75 24-110 178-259 (273)
65 1vc4_A Indole-3-glycerol phosp 98.6 6.8E-08 2.3E-12 72.1 6.0 76 24-105 173-253 (254)
66 1ujp_A Tryptophan synthase alp 98.6 1.6E-07 5.5E-12 70.8 7.8 97 6-108 150-253 (271)
67 4e38_A Keto-hydroxyglutarate-a 98.6 2.2E-07 7.7E-12 68.8 8.3 74 10-94 135-208 (232)
68 1wv2_A Thiazole moeity, thiazo 98.6 5.7E-07 1.9E-11 67.7 10.1 82 24-109 155-237 (265)
69 1ka9_F Imidazole glycerol phos 98.5 5.3E-07 1.8E-11 65.8 9.5 88 13-106 155-244 (252)
70 3c2e_A Nicotinate-nucleotide p 98.5 6.7E-08 2.3E-12 73.7 4.3 79 5-95 202-284 (294)
71 3tfx_A Orotidine 5'-phosphate 98.5 1.3E-07 4.4E-12 71.1 5.5 49 63-111 180-239 (259)
72 1to3_A Putative aldolase YIHT; 98.5 5.3E-07 1.8E-11 68.9 8.6 51 60-110 221-288 (304)
73 1vqt_A Orotidine 5'-phosphate 98.5 1.4E-07 4.7E-12 68.8 5.0 57 49-108 146-212 (213)
74 4dbe_A Orotidine 5'-phosphate 98.5 2.7E-07 9.4E-12 67.7 6.5 62 49-111 147-210 (222)
75 3bw2_A 2-nitropropane dioxygen 98.5 7.9E-07 2.7E-11 69.0 8.9 82 10-97 153-246 (369)
76 1ep3_A Dihydroorotate dehydrog 98.5 1.3E-06 4.3E-11 65.7 9.8 96 11-109 177-292 (311)
77 2htm_A Thiazole biosynthesis p 98.4 1.5E-06 5.1E-11 65.5 8.8 83 24-109 144-228 (268)
78 3tha_A Tryptophan synthase alp 98.4 1.6E-06 5.4E-11 65.0 8.5 98 6-108 147-250 (252)
79 3lab_A Putative KDPG (2-keto-3 98.3 6.6E-07 2.3E-11 65.7 5.8 74 10-94 120-193 (217)
80 3tqv_A Nicotinate-nucleotide p 98.3 1.3E-06 4.5E-11 66.5 7.4 73 8-94 204-276 (287)
81 2w6r_A Imidazole glycerol phos 98.3 2E-06 6.7E-11 63.3 7.9 85 12-102 158-244 (266)
82 3bo9_A Putative nitroalkan dio 98.3 9.1E-07 3.1E-11 67.9 6.2 79 12-96 133-213 (326)
83 1qap_A Quinolinic acid phospho 98.3 7.4E-07 2.5E-11 68.1 5.6 73 8-95 214-287 (296)
84 3paj_A Nicotinate-nucleotide p 98.3 1.9E-06 6.5E-11 66.5 7.5 72 9-94 238-309 (320)
85 3l0g_A Nicotinate-nucleotide p 98.3 3.2E-06 1.1E-10 64.7 8.5 74 8-95 213-286 (300)
86 3tr2_A Orotidine 5'-phosphate 98.3 1.4E-06 4.9E-11 64.6 6.4 47 63-109 180-237 (239)
87 3gnn_A Nicotinate-nucleotide p 98.3 2.5E-06 8.7E-11 65.3 7.5 61 24-95 228-288 (298)
88 2z6i_A Trans-2-enoyl-ACP reduc 98.2 2.5E-06 8.4E-11 65.4 6.5 79 12-96 119-199 (332)
89 3ldv_A Orotidine 5'-phosphate 98.2 2.8E-06 9.6E-11 63.6 6.0 57 51-108 186-254 (255)
90 1jub_A Dihydroorotate dehydrog 98.1 2.1E-05 7.1E-10 59.3 10.5 105 5-110 163-295 (311)
91 3r2g_A Inosine 5'-monophosphat 98.1 8.8E-06 3E-10 63.7 8.2 81 8-94 148-234 (361)
92 2e6f_A Dihydroorotate dehydrog 98.1 2.1E-05 7.3E-10 59.3 10.0 72 39-110 223-297 (314)
93 3glc_A Aldolase LSRF; TIM barr 98.1 9.4E-06 3.2E-10 62.0 7.2 58 52-110 216-279 (295)
94 3khj_A Inosine-5-monophosphate 98.1 1.6E-05 5.3E-10 62.1 8.6 81 12-95 155-243 (361)
95 3tdn_A FLR symmetric alpha-bet 98.1 5.2E-07 1.8E-11 66.1 0.0 75 25-103 169-244 (247)
96 3vzx_A Heptaprenylglyceryl pho 98.0 1.5E-05 5E-10 58.9 6.6 82 5-95 119-215 (228)
97 3oix_A Putative dihydroorotate 98.0 4.9E-05 1.7E-09 59.0 9.6 108 3-110 196-328 (345)
98 4ef8_A Dihydroorotate dehydrog 98.0 5.4E-05 1.8E-09 59.0 9.6 107 4-110 197-330 (354)
99 1qo2_A Molecule: N-((5-phospho 97.9 1.8E-05 6.3E-10 57.5 6.4 85 11-101 145-237 (241)
100 1i4n_A Indole-3-glycerol phosp 97.9 4.3E-05 1.5E-09 57.1 8.3 76 25-106 171-248 (251)
101 4fo4_A Inosine 5'-monophosphat 97.9 4.9E-05 1.7E-09 59.5 8.2 79 13-94 160-246 (366)
102 3zwt_A Dihydroorotate dehydrog 97.9 8.3E-05 2.8E-09 58.1 9.2 105 4-109 224-350 (367)
103 3iwp_A Copper homeostasis prot 97.8 4.2E-05 1.4E-09 58.2 6.1 76 4-88 155-238 (287)
104 4gj1_A 1-(5-phosphoribosyl)-5- 97.8 6.3E-05 2.2E-09 55.5 6.9 83 9-97 30-113 (243)
105 3cwo_X Beta/alpha-barrel prote 97.8 0.00022 7.7E-09 50.0 9.4 86 13-105 133-221 (237)
106 3tdn_A FLR symmetric alpha-bet 97.7 9.8E-05 3.3E-09 53.9 7.4 80 12-97 37-117 (247)
107 3w01_A Heptaprenylglyceryl pho 97.7 4.4E-05 1.5E-09 56.6 5.5 61 25-94 159-220 (235)
108 3b0p_A TRNA-dihydrouridine syn 97.6 7.9E-05 2.7E-09 57.6 5.6 71 24-95 156-232 (350)
109 1jcn_A Inosine monophosphate d 97.6 0.00027 9.2E-09 56.9 8.9 80 12-95 306-394 (514)
110 1ka9_F Imidazole glycerol phos 97.6 0.00024 8.2E-09 51.6 7.5 80 11-96 32-112 (252)
111 1w0m_A TIM, triosephosphate is 97.6 0.00097 3.3E-08 49.0 10.5 80 31-110 137-224 (226)
112 1z41_A YQJM, probable NADH-dep 97.6 0.00055 1.9E-08 52.5 9.5 97 2-102 211-321 (338)
113 1f76_A Dihydroorotate dehydrog 97.5 0.00023 7.7E-09 54.3 7.1 93 4-97 215-328 (336)
114 3gr7_A NADPH dehydrogenase; fl 97.5 0.0011 3.6E-08 51.2 10.9 97 2-102 211-321 (340)
115 3i65_A Dihydroorotate dehydrog 97.5 0.00026 8.9E-09 56.3 7.2 106 4-110 273-398 (415)
116 3ffs_A Inosine-5-monophosphate 97.5 0.00035 1.2E-08 55.3 7.8 79 13-94 195-281 (400)
117 1gte_A Dihydropyrimidine dehyd 97.5 0.00085 2.9E-08 58.1 10.6 71 39-109 766-839 (1025)
118 1p0k_A Isopentenyl-diphosphate 97.5 0.00089 3.1E-08 51.3 9.7 83 9-94 188-286 (349)
119 1eep_A Inosine 5'-monophosphat 97.5 0.00045 1.6E-08 54.0 8.1 80 12-94 204-291 (404)
120 1thf_D HISF protein; thermophI 97.5 0.00061 2.1E-08 49.4 8.3 80 11-96 31-111 (253)
121 2f6u_A GGGPS, (S)-3-O-geranylg 97.4 0.00016 5.4E-09 53.5 5.0 74 12-94 147-224 (234)
122 3hgj_A Chromate reductase; TIM 97.4 0.00065 2.2E-08 52.4 8.7 96 3-102 222-332 (349)
123 3eww_A Ompdecase, orotidine-5' 97.4 0.00021 7.3E-09 53.5 5.7 45 63-107 193-249 (260)
124 1vhn_A Putative flavin oxidore 97.4 0.00039 1.3E-08 52.8 7.2 70 24-99 152-224 (318)
125 1tv5_A Dhodehase, dihydroorota 97.4 0.00062 2.1E-08 54.5 8.5 106 4-110 301-426 (443)
126 4avf_A Inosine-5'-monophosphat 97.4 0.00066 2.3E-08 54.7 8.7 79 13-94 281-367 (490)
127 2gou_A Oxidoreductase, FMN-bin 97.4 0.0013 4.6E-08 51.0 10.2 74 24-102 262-336 (365)
128 3vk5_A MOEO5; TIM barrel, tran 97.4 0.00063 2.2E-08 51.7 7.7 48 47-94 213-262 (286)
129 1hg3_A Triosephosphate isomera 97.4 0.0022 7.5E-08 47.0 10.3 76 31-106 140-223 (225)
130 2r14_A Morphinone reductase; H 97.4 0.0012 4.1E-08 51.6 9.4 80 18-102 262-342 (377)
131 1jvn_A Glutamine, bifunctional 97.3 0.00087 3E-08 54.7 8.8 80 11-93 281-372 (555)
132 1gox_A (S)-2-hydroxy-acid oxid 97.3 0.0013 4.5E-08 51.1 9.4 78 12-93 235-314 (370)
133 3qw3_A Orotidine-5-phosphate d 97.3 0.00049 1.7E-08 51.3 6.6 110 5-114 108-254 (255)
134 2agk_A 1-(5-phosphoribosyl)-5- 97.3 0.00041 1.4E-08 51.7 6.2 72 10-94 38-109 (260)
135 1vyr_A Pentaerythritol tetrani 97.3 0.002 6.8E-08 50.0 10.1 79 18-102 258-337 (364)
136 1viz_A PCRB protein homolog; s 97.3 0.00022 7.5E-09 52.9 4.4 56 47-105 169-225 (240)
137 3tjx_A Dihydroorotate dehydrog 97.3 0.00042 1.4E-08 53.3 6.2 74 38-111 255-331 (354)
138 1pii_A N-(5'phosphoribosyl)ant 97.3 0.0012 4.2E-08 52.9 8.9 89 8-105 163-253 (452)
139 3usb_A Inosine-5'-monophosphat 97.3 0.0012 4.1E-08 53.4 8.8 69 24-93 317-393 (511)
140 2i1o_A Nicotinate phosphoribos 97.3 0.00089 3.1E-08 52.9 7.8 66 25-95 236-305 (398)
141 3aty_A Tcoye, prostaglandin F2 97.2 0.0043 1.5E-07 48.5 11.3 77 18-102 273-350 (379)
142 2fds_A Orotidine-monophosphate 97.2 0.0003 1E-08 54.9 4.6 63 51-113 270-339 (352)
143 2agk_A 1-(5-phosphoribosyl)-5- 97.2 0.0012 4.2E-08 49.0 7.8 86 14-105 162-257 (260)
144 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.0011 3.6E-08 48.9 7.1 86 13-104 154-241 (243)
145 3l5l_A Xenobiotic reductase A; 97.2 0.0016 5.5E-08 50.5 8.2 76 24-102 258-339 (363)
146 1vcf_A Isopentenyl-diphosphate 97.2 0.0049 1.7E-07 46.9 10.7 81 9-92 191-289 (332)
147 2y88_A Phosphoribosyl isomeras 97.1 0.00085 2.9E-08 48.4 6.0 77 11-94 32-109 (244)
148 1v5x_A PRA isomerase, phosphor 97.1 0.0016 5.5E-08 47.0 7.3 62 26-93 118-179 (203)
149 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.0012 3.9E-08 54.5 7.3 54 48-102 269-324 (671)
150 1jvn_A Glutamine, bifunctional 97.1 0.0018 6.2E-08 52.9 8.3 86 13-104 455-543 (555)
151 1vzw_A Phosphoribosyl isomeras 97.1 0.00088 3E-08 48.4 5.6 77 11-94 33-110 (244)
152 2w6r_A Imidazole glycerol phos 97.1 0.0017 5.9E-08 47.4 7.0 76 11-92 31-107 (266)
153 2c6q_A GMP reductase 2; TIM ba 97.0 0.011 3.7E-07 45.7 11.6 78 12-93 171-257 (351)
154 3gka_A N-ethylmaleimide reduct 97.0 0.0039 1.3E-07 48.5 8.6 75 16-102 255-330 (361)
155 3sgz_A Hydroxyacid oxidase 2; 97.0 0.0028 9.5E-08 49.4 7.8 94 12-109 227-328 (352)
156 1h5y_A HISF; histidine biosynt 97.0 0.0043 1.5E-07 44.2 8.3 80 11-96 34-114 (253)
157 1nsj_A PRAI, phosphoribosyl an 96.9 0.0014 4.9E-08 47.2 5.2 63 26-93 120-185 (205)
158 1vrd_A Inosine-5'-monophosphat 96.9 0.0047 1.6E-07 49.3 8.5 78 12-92 288-373 (494)
159 3qw4_B UMP synthase; N-termina 96.8 0.0016 5.4E-08 52.2 5.6 110 5-114 109-255 (453)
160 2ffc_A Orotidine 5-monophospha 96.8 0.0027 9.2E-08 49.5 6.7 62 51-113 280-349 (353)
161 3kru_A NADH:flavin oxidoreduct 96.8 0.0067 2.3E-07 46.8 8.9 96 2-102 212-321 (343)
162 1qo2_A Molecule: N-((5-phospho 96.8 0.0017 5.8E-08 47.0 5.0 81 10-97 30-111 (241)
163 2p10_A MLL9387 protein; putati 96.8 0.0035 1.2E-07 47.6 6.8 84 24-111 182-281 (286)
164 4ab4_A Xenobiotic reductase B; 96.8 0.0058 2E-07 47.6 8.1 74 17-102 248-322 (362)
165 2yxb_A Coenzyme B12-dependent 96.7 0.042 1.4E-06 37.8 11.6 93 7-110 52-145 (161)
166 1p4c_A L(+)-mandelate dehydrog 96.7 0.0017 5.9E-08 50.6 4.9 77 12-93 235-312 (380)
167 4a29_A Engineered retro-aldol 96.7 0.0066 2.2E-07 45.5 7.8 70 24-98 172-243 (258)
168 3g3d_A UMP synthase, uridine 5 96.7 0.0026 8.8E-08 48.9 5.6 45 63-107 245-301 (312)
169 2hsa_B 12-oxophytodienoate red 96.7 0.016 5.5E-07 45.6 10.3 54 48-102 308-362 (402)
170 1ypf_A GMP reductase; GUAC, pu 96.7 0.0089 3E-07 45.7 8.6 79 11-93 158-244 (336)
171 4aaj_A N-(5'-phosphoribosyl)an 96.7 0.0044 1.5E-07 45.4 6.6 61 24-92 145-206 (228)
172 2qr6_A IMP dehydrogenase/GMP r 96.7 0.0048 1.7E-07 48.0 7.1 77 12-92 221-310 (393)
173 1twd_A Copper homeostasis prot 96.6 0.014 4.8E-07 43.6 9.0 71 11-89 129-199 (256)
174 2nli_A Lactate oxidase; flavoe 96.6 0.0059 2E-07 47.5 7.1 77 12-92 239-317 (368)
175 1icp_A OPR1, 12-oxophytodienoa 96.6 0.0099 3.4E-07 46.3 8.2 82 16-102 261-344 (376)
176 2bdq_A Copper homeostasis prot 96.6 0.0082 2.8E-07 44.1 7.2 82 10-99 133-218 (224)
177 4fxs_A Inosine-5'-monophosphat 96.5 0.0096 3.3E-07 48.0 8.2 78 14-94 284-369 (496)
178 4fxs_A Inosine-5'-monophosphat 96.5 0.02 7E-07 46.1 9.9 79 2-88 221-300 (496)
179 3sr7_A Isopentenyl-diphosphate 96.4 0.0081 2.8E-07 46.9 6.8 79 11-92 218-311 (365)
180 3gdm_A Orotidine 5'-phosphate 96.2 0.0082 2.8E-07 45.0 5.8 35 73-107 219-254 (267)
181 2nzl_A Hydroxyacid oxidase 1; 96.2 0.013 4.6E-07 45.9 7.1 78 12-93 262-341 (392)
182 4avf_A Inosine-5'-monophosphat 96.2 0.033 1.1E-06 44.8 9.4 79 2-88 219-298 (490)
183 2i14_A Nicotinate-nucleotide p 96.2 0.006 2.1E-07 48.0 4.9 65 25-95 234-302 (395)
184 1zfj_A Inosine monophosphate d 96.1 0.03 1E-06 44.4 8.7 69 24-93 294-370 (491)
185 4af0_A Inosine-5'-monophosphat 96.0 0.024 8.2E-07 46.5 7.7 79 2-88 271-350 (556)
186 3l5a_A NADH/flavin oxidoreduct 96.0 0.015 5E-07 46.1 6.3 51 51-102 308-360 (419)
187 2fli_A Ribulose-phosphate 3-ep 95.9 0.049 1.7E-06 38.4 8.4 93 7-106 13-107 (220)
188 1vrd_A Inosine-5'-monophosphat 95.8 0.067 2.3E-06 42.6 9.6 79 3-89 228-307 (494)
189 3f4w_A Putative hexulose 6 pho 95.7 0.082 2.8E-06 37.0 8.9 82 1-90 1-86 (211)
190 3usb_A Inosine-5'-monophosphat 95.7 0.072 2.5E-06 43.0 9.5 79 2-88 246-325 (511)
191 1vc4_A Indole-3-glycerol phosp 95.6 0.11 3.6E-06 38.4 9.4 82 10-101 65-147 (254)
192 3n3m_A Orotidine 5'-phosphate 95.6 0.026 8.9E-07 43.8 6.2 62 51-112 268-336 (342)
193 4fo4_A Inosine 5'-monophosphat 95.5 0.092 3.1E-06 40.9 9.2 78 3-88 99-177 (366)
194 3vkj_A Isopentenyl-diphosphate 95.5 0.03 1E-06 43.6 6.4 44 49-92 256-300 (368)
195 1kbi_A Cytochrome B2, L-LCR; f 95.5 0.052 1.8E-06 43.9 8.0 76 13-92 354-436 (511)
196 1me8_A Inosine-5'-monophosphat 95.5 0.033 1.1E-06 44.8 6.6 77 13-92 295-385 (503)
197 1eep_A Inosine 5'-monophosphat 95.3 0.18 6E-06 39.2 10.0 67 14-88 156-222 (404)
198 3kts_A Glycerol uptake operon 95.2 0.058 2E-06 38.6 6.5 58 25-94 127-186 (192)
199 1pii_A N-(5'phosphoribosyl)ant 95.1 0.059 2E-06 43.2 7.0 60 25-92 372-431 (452)
200 1geq_A Tryptophan synthase alp 95.1 0.071 2.4E-06 38.3 6.8 65 26-91 32-118 (248)
201 3ffs_A Inosine-5-monophosphate 95.0 0.13 4.3E-06 40.6 8.4 76 3-88 137-212 (400)
202 1ccw_A Protein (glutamate muta 94.9 0.15 5.1E-06 34.0 7.7 91 7-108 37-134 (137)
203 3khj_A Inosine-5-monophosphate 94.8 0.31 1.1E-05 37.7 10.3 76 3-88 98-173 (361)
204 3kht_A Response regulator; PSI 94.8 0.42 1.4E-05 30.3 10.5 78 24-113 50-131 (144)
205 2c6q_A GMP reductase 2; TIM ba 94.6 0.15 5.1E-06 39.2 7.9 69 14-88 121-189 (351)
206 2jgq_A Triosephosphate isomera 94.5 0.058 2E-06 39.7 5.1 72 30-101 153-230 (233)
207 3k30_A Histamine dehydrogenase 94.5 0.1 3.4E-06 43.1 7.1 52 49-101 284-337 (690)
208 1o94_A Tmadh, trimethylamine d 94.5 0.1 3.5E-06 43.5 7.2 53 48-101 280-334 (729)
209 3r2g_A Inosine 5'-monophosphat 94.4 0.16 5.3E-06 39.6 7.5 67 14-88 103-169 (361)
210 1yya_A Triosephosphate isomera 94.3 0.11 3.7E-06 38.6 6.3 71 31-101 162-246 (250)
211 3sy1_A UPF0001 protein YGGS; e 94.2 0.093 3.2E-06 38.5 5.7 76 20-97 153-232 (245)
212 4a3u_A NCR, NADH\:flavin oxido 94.2 0.22 7.5E-06 38.3 8.0 74 25-102 254-329 (358)
213 2j27_A Triosephosphate isomera 94.1 0.2 6.8E-06 37.2 7.4 72 30-102 162-247 (250)
214 3qja_A IGPS, indole-3-glycerol 94.1 0.17 5.8E-06 37.7 7.0 74 11-93 73-147 (272)
215 2yc6_A Triosephosphate isomera 93.9 0.42 1.4E-05 35.6 8.8 70 31-102 166-250 (257)
216 2btm_A TIM, protein (triosepho 93.9 0.12 4.2E-06 38.4 5.9 43 59-101 203-246 (252)
217 1o5x_A TIM, triosephosphate is 93.9 0.19 6.6E-06 37.2 6.9 72 30-102 160-245 (248)
218 4af0_A Inosine-5'-monophosphat 93.9 0.3 1E-05 40.1 8.5 80 8-93 329-418 (556)
219 3lte_A Response regulator; str 93.8 0.61 2.1E-05 28.9 8.5 75 24-110 49-125 (132)
220 1aw2_A Triosephosphate isomera 93.7 0.078 2.7E-06 39.5 4.5 72 31-102 165-249 (256)
221 3tsm_A IGPS, indole-3-glycerol 93.6 0.65 2.2E-05 34.7 9.4 78 7-93 75-154 (272)
222 1jcn_A Inosine monophosphate d 93.6 0.48 1.7E-05 37.8 9.2 78 3-88 246-324 (514)
223 3fok_A Uncharacterized protein 93.5 0.11 3.7E-06 39.8 5.0 51 60-110 237-297 (307)
224 3hv2_A Response regulator/HD d 93.5 0.91 3.1E-05 29.1 9.6 74 24-109 57-132 (153)
225 3snk_A Response regulator CHEY 93.4 0.42 1.5E-05 30.0 7.2 73 24-108 58-131 (135)
226 2qr6_A IMP dehydrogenase/GMP r 93.3 0.55 1.9E-05 36.2 8.9 82 3-89 158-240 (393)
227 1rpx_A Protein (ribulose-phosp 93.1 0.89 3E-05 32.1 9.2 93 9-106 22-116 (230)
228 2uva_G Fatty acid synthase bet 93.0 0.34 1.2E-05 45.2 8.3 69 24-93 715-800 (2060)
229 2qxy_A Response regulator; reg 92.9 1.1 3.6E-05 28.2 9.2 73 24-109 47-120 (142)
230 1tre_A Triosephosphate isomera 92.9 0.14 4.8E-06 38.1 4.8 44 60-103 204-248 (255)
231 1dbw_A Transcriptional regulat 92.9 0.99 3.4E-05 27.8 9.1 74 24-109 46-120 (126)
232 1mzh_A Deoxyribose-phosphate a 92.7 0.6 2E-05 33.5 7.9 56 24-85 144-201 (225)
233 3nhm_A Response regulator; pro 92.7 0.96 3.3E-05 28.0 8.1 76 24-111 46-123 (133)
234 2f7f_A Nicotinate phosphoribos 92.6 0.073 2.5E-06 43.1 3.1 36 58-93 284-321 (494)
235 4e7p_A Response regulator; DNA 92.4 1.3 4.6E-05 28.2 10.3 74 24-109 65-139 (150)
236 1ub3_A Aldolase protein; schif 92.4 0.29 9.8E-06 35.5 5.8 65 24-93 145-212 (220)
237 3gt7_A Sensor protein; structu 92.3 1.5 5E-05 28.2 9.6 75 24-110 50-127 (154)
238 1me8_A Inosine-5'-monophosphat 92.1 0.4 1.4E-05 38.4 6.8 79 3-89 234-313 (503)
239 3kto_A Response regulator rece 91.9 1.2 4.2E-05 27.8 7.9 76 25-110 50-126 (136)
240 3rqi_A Response regulator prot 91.8 1 3.5E-05 30.1 7.8 68 11-87 39-107 (184)
241 1ea0_A Glutamate synthase [NAD 91.8 0.92 3.1E-05 41.2 9.2 88 3-91 996-1096(1479)
242 2xij_A Methylmalonyl-COA mutas 91.6 3.6 0.00012 35.0 12.3 92 8-110 639-731 (762)
243 3sr7_A Isopentenyl-diphosphate 91.6 0.55 1.9E-05 36.5 6.9 80 6-88 150-237 (365)
244 1zfj_A Inosine monophosphate d 91.6 1.1 3.7E-05 35.4 8.8 78 3-88 224-302 (491)
245 3oa3_A Aldolase; structural ge 91.5 1 3.5E-05 34.0 8.1 59 24-85 200-260 (288)
246 2pln_A HP1043, response regula 91.4 1.7 5.7E-05 27.1 8.3 73 24-113 61-136 (137)
247 2zay_A Response regulator rece 91.4 1.7 5.9E-05 27.3 9.9 74 25-110 52-128 (147)
248 3zen_D Fatty acid synthase; tr 91.3 0.27 9.2E-06 47.5 5.6 42 52-94 599-652 (3089)
249 3eul_A Possible nitrate/nitrit 91.2 1.9 6.4E-05 27.4 9.8 74 24-109 60-134 (152)
250 3tjl_A NADPH dehydrogenase; OL 91.2 0.12 4E-06 40.9 2.7 74 26-102 280-360 (407)
251 4adt_A Pyridoxine biosynthetic 91.1 0.5 1.7E-05 35.7 6.1 78 4-85 23-104 (297)
252 1y80_A Predicted cobalamin bin 91.0 1.5 5E-05 30.7 8.2 86 6-107 121-208 (210)
253 3cfy_A Putative LUXO repressor 91.0 1.9 6.5E-05 27.1 10.1 73 25-109 48-121 (137)
254 3hzh_A Chemotaxis response reg 90.9 1.7 5.7E-05 28.1 8.0 71 25-107 83-154 (157)
255 2cu0_A Inosine-5'-monophosphat 90.9 0.87 3E-05 36.2 7.6 67 25-93 287-362 (486)
256 4dad_A Putative pilus assembly 90.9 2 6.8E-05 27.0 8.4 89 10-110 52-141 (146)
257 3cu5_A Two component transcrip 90.8 2 6.9E-05 27.1 9.5 74 24-109 48-122 (141)
258 3i42_A Response regulator rece 90.8 0.79 2.7E-05 28.2 6.0 74 24-110 46-122 (127)
259 3crn_A Response regulator rece 90.7 2 6.7E-05 26.7 9.6 74 24-109 46-120 (132)
260 1p0k_A Isopentenyl-diphosphate 90.7 2.6 8.8E-05 31.8 9.8 80 7-88 123-209 (349)
261 2i2x_B MTAC, methyltransferase 90.6 1.2 4.2E-05 32.5 7.7 72 6-85 156-227 (258)
262 3hdg_A Uncharacterized protein 90.6 2 6.8E-05 26.7 9.4 75 24-110 50-125 (137)
263 3cwo_X Beta/alpha-barrel prote 90.6 2.5 8.5E-05 28.8 9.0 82 5-96 7-90 (237)
264 2pl1_A Transcriptional regulat 90.6 1.8 6.2E-05 26.1 9.5 75 24-110 43-118 (121)
265 3ezx_A MMCP 1, monomethylamine 90.5 0.87 3E-05 32.5 6.7 85 6-106 125-213 (215)
266 3jte_A Response regulator rece 90.4 2.2 7.4E-05 26.7 11.6 74 24-109 48-122 (143)
267 1b9b_A TIM, protein (triosepho 90.3 0.16 5.3E-06 37.9 2.6 42 60-101 206-250 (255)
268 1vkf_A Glycerol uptake operon 90.2 0.34 1.2E-05 34.5 4.2 55 24-93 127-183 (188)
269 2vp8_A Dihydropteroate synthas 90.0 1.3 4.4E-05 33.9 7.6 73 14-91 69-147 (318)
270 3kcn_A Adenylate cyclase homol 90.0 2.5 8.5E-05 26.9 10.2 73 25-109 48-122 (151)
271 2ekc_A AQ_1548, tryptophan syn 89.9 2.6 8.9E-05 30.7 9.0 65 24-88 43-129 (262)
272 3eod_A Protein HNR; response r 89.8 2.3 7.9E-05 26.1 9.4 57 24-87 50-107 (130)
273 1ct5_A Protein (yeast hypothet 89.6 0.44 1.5E-05 34.9 4.6 74 22-97 170-249 (256)
274 1ofd_A Ferredoxin-dependent gl 89.6 1.6 5.5E-05 39.8 8.8 87 4-91 1032-1131(1520)
275 1mo0_A TIM, triosephosphate is 89.5 0.68 2.3E-05 34.8 5.6 72 30-102 179-265 (275)
276 3r79_A Uncharacterized protein 89.5 0.79 2.7E-05 33.6 5.8 70 23-98 156-225 (244)
277 1ypf_A GMP reductase; GUAC, pu 89.5 0.65 2.2E-05 35.2 5.6 56 26-88 121-177 (336)
278 1qkk_A DCTD, C4-dicarboxylate 89.4 2.8 9.7E-05 26.6 9.9 72 24-107 46-118 (155)
279 3m9y_A Triosephosphate isomera 89.3 0.57 2E-05 34.8 4.9 70 31-100 166-249 (254)
280 1req_A Methylmalonyl-COA mutas 89.3 5.4 0.00019 33.7 11.4 91 8-110 631-723 (727)
281 3lua_A Response regulator rece 89.2 2.1 7.3E-05 26.7 7.2 73 25-109 50-126 (140)
282 1tx2_A DHPS, dihydropteroate s 89.0 4.9 0.00017 30.3 10.1 66 24-91 75-145 (297)
283 1srr_A SPO0F, sporulation resp 89.0 2.6 8.8E-05 25.6 7.6 72 25-108 47-119 (124)
284 2qv0_A Protein MRKE; structura 89.0 2.9 9.8E-05 26.1 10.3 75 24-111 54-128 (143)
285 2ayx_A Sensor kinase protein R 88.9 4.7 0.00016 28.5 11.1 87 10-110 160-247 (254)
286 2i9e_A Triosephosphate isomera 88.7 0.41 1.4E-05 35.7 3.8 72 31-103 160-246 (259)
287 3f6c_A Positive transcription 88.7 2.2 7.5E-05 26.3 6.9 74 24-109 45-119 (134)
288 3hdv_A Response regulator; PSI 88.6 2.9 0.0001 25.8 8.9 73 25-109 52-126 (136)
289 2gkg_A Response regulator homo 88.6 2.5 8.6E-05 25.4 7.0 71 25-107 49-122 (127)
290 2r25_B Osmosensing histidine p 88.5 3.1 0.00011 25.9 8.0 74 25-110 52-127 (133)
291 1h7n_A 5-aminolaevulinic acid 88.5 2.1 7.2E-05 33.1 7.7 71 8-88 238-329 (342)
292 2vxn_A Triosephosphate isomera 88.5 0.81 2.8E-05 33.9 5.3 71 30-102 163-248 (251)
293 1n7k_A Deoxyribose-phosphate a 88.4 0.47 1.6E-05 34.7 3.9 62 24-92 160-227 (234)
294 3ajx_A 3-hexulose-6-phosphate 88.3 0.85 2.9E-05 31.5 5.1 78 1-88 1-84 (207)
295 3grc_A Sensor protein, kinase; 88.2 1.7 5.8E-05 27.1 6.2 76 24-111 49-128 (140)
296 3r0j_A Possible two component 88.2 5 0.00017 28.0 10.6 75 24-110 66-141 (250)
297 3h5i_A Response regulator/sens 88.1 2.6 8.7E-05 26.4 7.0 86 11-110 37-124 (140)
298 3lab_A Putative KDPG (2-keto-3 87.9 1.2 4.2E-05 32.2 5.9 44 45-88 49-92 (217)
299 1pv8_A Delta-aminolevulinic ac 87.8 2 6.7E-05 33.1 7.1 72 7-88 226-318 (330)
300 1a04_A Nitrate/nitrite respons 87.6 4.8 0.00016 27.1 9.7 73 25-109 51-124 (215)
301 1yxy_A Putative N-acetylmannos 87.5 5.5 0.00019 27.9 9.1 77 14-107 40-130 (234)
302 3gl9_A Response regulator; bet 87.5 3.4 0.00012 25.3 10.0 73 24-108 45-120 (122)
303 3cg4_A Response regulator rece 87.2 1.5 5.1E-05 27.4 5.4 77 24-112 50-129 (142)
304 3heb_A Response regulator rece 87.2 4.1 0.00014 25.8 10.0 73 24-108 58-133 (152)
305 1nvm_A HOA, 4-hydroxy-2-oxoval 87.2 0.88 3E-05 34.6 5.0 44 45-88 67-113 (345)
306 3ndo_A Deoxyribose-phosphate a 87.1 1.4 4.7E-05 32.2 5.8 56 24-85 158-216 (231)
307 1vhc_A Putative KHG/KDPG aldol 87.0 2.3 7.7E-05 30.6 6.8 66 13-89 32-97 (224)
308 1yio_A Response regulatory pro 86.9 4.5 0.00015 27.1 8.1 73 24-108 47-120 (208)
309 2rjn_A Response regulator rece 86.9 4.3 0.00015 25.7 10.1 84 13-109 40-125 (154)
310 3vkj_A Isopentenyl-diphosphate 86.9 1 3.5E-05 34.9 5.2 75 11-88 135-218 (368)
311 1qop_A Tryptophan synthase alp 86.7 2.8 9.7E-05 30.5 7.4 68 24-91 43-132 (268)
312 3t6k_A Response regulator rece 86.6 4.2 0.00014 25.4 8.9 86 11-110 36-124 (136)
313 3mm4_A Histidine kinase homolo 86.5 3.5 0.00012 28.1 7.4 57 25-88 119-181 (206)
314 1xhf_A DYE resistance, aerobic 86.3 3.8 0.00013 24.7 8.8 74 24-110 46-120 (123)
315 1wbh_A KHG/KDPG aldolase; lyas 86.3 2.8 9.6E-05 29.8 7.0 65 14-89 32-96 (214)
316 3igs_A N-acetylmannosamine-6-p 86.1 3.9 0.00013 29.4 7.7 58 48-106 58-127 (232)
317 3dzd_A Transcriptional regulat 86.0 8.1 0.00028 29.3 9.9 75 24-110 43-118 (368)
318 3eqz_A Response regulator; str 85.9 2 6.8E-05 26.4 5.5 72 26-109 47-124 (135)
319 3vnd_A TSA, tryptophan synthas 85.9 0.95 3.2E-05 33.6 4.4 78 13-92 35-134 (267)
320 3n53_A Response regulator rece 85.9 2.6 9E-05 26.2 6.1 74 24-109 45-121 (140)
321 3b2n_A Uncharacterized protein 85.8 4.5 0.00015 25.0 9.6 86 10-109 36-122 (133)
322 4gbu_A NADPH dehydrogenase 1; 85.5 0.71 2.4E-05 35.9 3.7 44 60-103 318-363 (400)
323 1y0e_A Putative N-acetylmannos 85.5 4.5 0.00015 28.1 7.7 58 49-107 46-116 (223)
324 3cnb_A DNA-binding response re 85.4 4.7 0.00016 24.8 10.4 75 24-110 53-130 (143)
325 2nv1_A Pyridoxal biosynthesis 85.2 3.3 0.00011 30.7 7.2 81 4-92 23-110 (305)
326 1r2r_A TIM, triosephosphate is 85.2 0.84 2.9E-05 33.7 3.8 70 30-100 160-244 (248)
327 3krs_A Triosephosphate isomera 85.2 3.2 0.00011 31.0 7.0 69 31-100 184-266 (271)
328 3ilh_A Two component response 85.2 4.9 0.00017 24.8 8.7 74 25-110 60-139 (146)
329 3jr2_A Hexulose-6-phosphate sy 85.2 2.2 7.6E-05 30.0 6.0 44 45-88 44-90 (218)
330 1k68_A Phytochrome response re 85.0 4.8 0.00016 24.6 10.4 75 25-111 55-132 (140)
331 2nli_A Lactate oxidase; flavoe 84.7 5.5 0.00019 30.6 8.4 62 46-108 216-281 (368)
332 1kgs_A DRRD, DNA binding respo 84.7 7.1 0.00024 26.3 8.9 75 24-110 45-120 (225)
333 3nav_A Tryptophan synthase alp 84.7 1 3.5E-05 33.5 4.1 78 13-92 37-136 (271)
334 3r12_A Deoxyribose-phosphate a 84.7 5.6 0.00019 29.5 8.1 56 24-85 185-242 (260)
335 4e38_A Keto-hydroxyglutarate-a 84.7 2 6.8E-05 31.3 5.6 65 14-89 50-114 (232)
336 1ney_A TIM, triosephosphate is 84.6 0.94 3.2E-05 33.5 3.8 69 31-101 160-243 (247)
337 2csu_A 457AA long hypothetical 84.5 13 0.00045 29.2 12.8 86 14-109 358-446 (457)
338 2dqw_A Dihydropteroate synthas 84.4 5.6 0.00019 29.9 8.1 80 7-91 49-133 (294)
339 1kbi_A Cytochrome B2, L-LCR; f 84.4 5.3 0.00018 32.2 8.4 61 47-108 331-395 (511)
340 1viz_A PCRB protein homolog; s 84.3 4.4 0.00015 29.5 7.3 74 6-93 14-89 (240)
341 3sgz_A Hydroxyacid oxidase 2; 84.1 5.7 0.00019 30.6 8.2 60 46-106 204-267 (352)
342 3cz5_A Two-component response 84.0 6.1 0.00021 24.9 8.9 58 24-88 50-108 (153)
343 1mvo_A PHOP response regulator 83.8 5.6 0.00019 24.4 9.1 73 25-109 47-120 (136)
344 3klo_A Transcriptional regulat 83.7 2.9 9.8E-05 28.7 5.9 74 24-109 53-128 (225)
345 2nzl_A Hydroxyacid oxidase 1; 83.6 5.2 0.00018 31.1 7.9 60 47-107 240-303 (392)
346 1m6j_A TIM, TPI, triosephospha 83.6 1.1 3.8E-05 33.3 3.8 71 30-101 169-254 (261)
347 1k66_A Phytochrome response re 83.3 6.1 0.00021 24.4 9.7 76 25-112 62-140 (149)
348 2v82_A 2-dehydro-3-deoxy-6-pho 83.2 2 6.7E-05 29.9 4.9 64 14-89 23-88 (212)
349 1zgz_A Torcad operon transcrip 83.1 5.6 0.00019 23.9 10.7 74 24-110 45-119 (122)
350 2f6u_A GGGPS, (S)-3-O-geranylg 82.9 4.7 0.00016 29.3 6.9 75 6-94 14-90 (234)
351 1tmy_A CHEY protein, TMY; chem 82.8 5.7 0.00019 23.8 9.2 70 25-106 47-117 (120)
352 1ujp_A Tryptophan synthase alp 82.8 4 0.00014 30.1 6.7 45 47-92 79-130 (271)
353 3cg0_A Response regulator rece 82.7 6.3 0.00022 24.2 10.6 74 25-111 54-129 (140)
354 3t8y_A CHEB, chemotaxis respon 82.7 6.9 0.00024 25.3 7.3 68 11-88 59-129 (164)
355 3ngj_A Deoxyribose-phosphate a 82.6 3.4 0.00012 30.3 6.1 56 24-85 169-226 (239)
356 3qst_A Triosephosphate isomera 81.6 4 0.00014 30.2 6.2 69 30-99 164-246 (255)
357 2uv8_G Fatty acid synthase sub 81.5 2 6.7E-05 40.3 5.3 68 25-93 723-807 (2051)
358 1ys7_A Transcriptional regulat 81.4 6.3 0.00022 26.8 7.0 86 11-110 39-125 (233)
359 3q58_A N-acetylmannosamine-6-p 81.4 6.5 0.00022 28.2 7.2 58 48-106 58-127 (229)
360 3na8_A Putative dihydrodipicol 81.3 15 0.0005 27.5 9.4 82 24-109 57-147 (315)
361 3q9s_A DNA-binding response re 81.3 12 0.0004 26.3 9.8 84 11-109 69-153 (249)
362 3s6d_A Putative triosephosphat 81.1 1.3 4.3E-05 33.9 3.4 77 30-107 218-308 (310)
363 1mxs_A KDPG aldolase; 2-keto-3 81.1 4.3 0.00015 29.1 6.2 66 13-89 41-106 (225)
364 3to5_A CHEY homolog; alpha(5)b 81.1 8.1 0.00028 25.1 7.1 85 10-108 44-131 (134)
365 1tqj_A Ribulose-phosphate 3-ep 81.0 11 0.00038 26.8 8.3 89 13-106 20-110 (230)
366 1dxe_A 2-dehydro-3-deoxy-galac 80.8 7.2 0.00025 28.2 7.4 75 13-90 158-239 (256)
367 3a10_A Response regulator; pho 80.5 4.4 0.00015 24.1 5.3 55 24-86 44-98 (116)
368 3h1g_A Chemotaxis protein CHEY 80.5 7.7 0.00026 23.7 9.9 86 10-108 37-125 (129)
369 3l21_A DHDPS, dihydrodipicolin 80.4 16 0.00053 27.2 9.8 82 24-109 48-138 (304)
370 1i3c_A Response regulator RCP1 80.2 8.7 0.0003 24.2 10.5 74 25-110 61-137 (149)
371 3qz6_A HPCH/HPAI aldolase; str 80.2 4.3 0.00015 29.7 6.0 77 12-90 155-238 (261)
372 3hl2_A O-phosphoseryl-tRNA(SEC 80.1 2.4 8.1E-05 34.4 4.8 74 11-87 200-280 (501)
373 1p2f_A Response regulator; DRR 79.8 11 0.00039 25.3 10.6 75 24-110 42-117 (220)
374 3n9r_A Fructose-bisphosphate a 79.6 7.3 0.00025 29.5 7.2 78 10-91 154-258 (307)
375 1p4c_A L(+)-mandelate dehydrog 79.6 3.5 0.00012 31.8 5.5 41 47-88 213-253 (380)
376 1gvf_A Tagatose-bisphosphate a 79.5 13 0.00046 27.7 8.6 78 10-91 154-235 (286)
377 1ny5_A Transcriptional regulat 79.5 15 0.00052 27.9 9.2 57 24-87 43-100 (387)
378 3iv3_A Tagatose 1,6-diphosphat 79.3 5.7 0.0002 30.4 6.6 45 49-94 235-286 (332)
379 1jbe_A Chemotaxis protein CHEY 79.3 8.1 0.00028 23.3 11.5 85 11-109 37-124 (128)
380 1gox_A (S)-2-hydroxy-acid oxid 79.3 4.6 0.00016 30.9 6.1 42 47-89 213-254 (370)
381 1vcv_A Probable deoxyribose-ph 79.2 12 0.0004 27.1 7.9 57 24-83 140-211 (226)
382 3qze_A DHDPS, dihydrodipicolin 78.9 18 0.00062 27.0 9.5 82 24-109 56-146 (314)
383 3luf_A Two-component system re 78.6 15 0.00051 26.0 9.8 87 11-110 156-245 (259)
384 2qr3_A Two-component system re 78.6 9 0.00031 23.4 8.7 79 24-109 46-125 (140)
385 3m6m_D Sensory/regulatory prot 78.5 9.9 0.00034 23.8 9.2 76 24-108 57-134 (143)
386 3tak_A DHDPS, dihydrodipicolin 78.5 17 0.0006 26.6 9.9 82 24-109 34-124 (291)
387 1s8n_A Putative antiterminator 78.2 11 0.00037 25.1 7.3 56 25-88 58-114 (205)
388 2v5j_A 2,4-dihydroxyhept-2-ENE 78.2 7.3 0.00025 28.9 6.8 76 12-90 178-260 (287)
389 4dpp_A DHDPS 2, dihydrodipicol 78.0 20 0.0007 27.6 9.4 80 24-107 92-180 (360)
390 1nvm_A HOA, 4-hydroxy-2-oxoval 77.6 8.5 0.00029 29.1 7.1 75 8-86 143-224 (345)
391 3si9_A DHDPS, dihydrodipicolin 77.4 20 0.00069 26.8 10.0 82 24-109 55-145 (315)
392 3bc8_A O-phosphoseryl-tRNA(SEC 77.4 8.1 0.00028 30.6 7.2 75 11-88 182-263 (450)
393 3ih5_A Electron transfer flavo 77.4 17 0.00057 25.8 8.9 72 40-111 14-90 (217)
394 2vws_A YFAU, 2-keto-3-deoxy su 77.3 9.9 0.00034 27.7 7.2 80 8-90 151-239 (267)
395 3flu_A DHDPS, dihydrodipicolin 77.0 20 0.00067 26.5 10.9 82 24-109 40-130 (297)
396 2ztj_A Homocitrate synthase; ( 76.9 6.8 0.00023 30.2 6.5 81 25-112 38-124 (382)
397 1w1z_A Delta-aminolevulinic ac 76.9 8 0.00027 29.7 6.6 71 7-88 227-318 (328)
398 2oz8_A MLL7089 protein; struct 76.8 5.1 0.00017 30.7 5.7 48 41-88 225-273 (389)
399 2zbt_A Pyridoxal biosynthesis 76.6 3.5 0.00012 30.3 4.6 71 11-85 29-104 (297)
400 2qsj_A DNA-binding response re 76.6 11 0.00039 23.5 8.4 87 10-109 36-123 (154)
401 1l6s_A Porphobilinogen synthas 76.3 9.6 0.00033 29.2 6.9 70 8-88 221-311 (323)
402 3eq2_A Probable two-component 75.9 22 0.00076 26.5 9.1 69 9-86 35-104 (394)
403 1w5q_A Delta-aminolevulinic ac 75.9 8.4 0.00029 29.7 6.6 71 7-88 234-324 (337)
404 3f6p_A Transcriptional regulat 75.9 11 0.00036 22.8 10.3 83 11-108 34-117 (120)
405 3m5v_A DHDPS, dihydrodipicolin 75.3 22 0.00076 26.2 9.9 82 24-109 40-131 (301)
406 2v5b_A Triosephosphate isomera 75.3 8.4 0.00029 28.2 6.3 70 30-101 156-240 (244)
407 2isw_A Putative fructose-1,6-b 75.1 8.3 0.00028 29.5 6.4 80 10-91 152-258 (323)
408 3qfw_A Ribulose-1,5-bisphospha 75.1 27 0.00093 27.2 9.4 88 24-114 276-370 (378)
409 2qvg_A Two component response 75.0 12 0.00041 23.0 6.4 70 25-106 59-131 (143)
410 1dc7_A NTRC, nitrogen regulati 74.4 1 3.6E-05 27.2 1.0 75 24-110 46-121 (124)
411 1xi3_A Thiamine phosphate pyro 74.2 12 0.00041 25.5 6.7 67 12-89 28-94 (215)
412 3q94_A Fructose-bisphosphate a 74.2 15 0.0005 27.6 7.5 78 10-91 158-239 (288)
413 1ydn_A Hydroxymethylglutaryl-C 74.0 23 0.00079 25.8 10.7 86 24-113 38-131 (295)
414 1qtw_A Endonuclease IV; DNA re 73.5 21 0.0007 25.0 11.4 106 1-108 2-130 (285)
415 2y5s_A DHPS, dihydropteroate s 73.4 14 0.00049 27.6 7.3 74 13-91 49-127 (294)
416 2tps_A Protein (thiamin phosph 73.4 11 0.00038 26.0 6.4 68 12-89 33-102 (227)
417 2x7v_A Probable endonuclease 4 72.9 21 0.00073 25.0 12.7 108 1-110 2-131 (287)
418 3ctl_A D-allulose-6-phosphate 72.7 20 0.00069 25.6 7.7 86 14-106 17-104 (231)
419 1eye_A DHPS 1, dihydropteroate 72.4 27 0.00092 25.9 10.7 65 24-91 41-110 (280)
420 2yw3_A 4-hydroxy-2-oxoglutarat 72.1 22 0.00076 24.8 8.0 68 9-89 24-91 (207)
421 3bul_A Methionine synthase; tr 72.1 16 0.00055 30.0 7.8 76 6-88 131-211 (579)
422 1aj0_A DHPS, dihydropteroate s 72.0 28 0.00094 25.8 10.3 66 24-91 50-120 (282)
423 1h1y_A D-ribulose-5-phosphate 72.0 21 0.00072 25.0 7.7 87 13-106 22-111 (228)
424 1dz3_A Stage 0 sporulation pro 72.0 14 0.00047 22.4 7.5 57 25-88 48-106 (130)
425 3daq_A DHDPS, dihydrodipicolin 71.8 27 0.00092 25.6 10.1 82 24-109 35-125 (292)
426 2jba_A Phosphate regulon trans 71.8 13 0.00046 22.2 7.1 74 24-109 45-121 (127)
427 1rvg_A Fructose-1,6-bisphospha 71.8 24 0.00083 26.6 8.3 78 10-91 152-256 (305)
428 4hb7_A Dihydropteroate synthas 71.5 17 0.00058 27.0 7.2 79 14-98 34-118 (270)
429 2qzj_A Two-component response 71.1 16 0.00053 22.6 11.4 74 24-110 47-121 (136)
430 3ovp_A Ribulose-phosphate 3-ep 70.9 23 0.0008 25.1 7.7 86 14-106 21-110 (228)
431 3w01_A Heptaprenylglyceryl pho 70.8 27 0.00093 25.3 8.1 78 5-97 16-95 (235)
432 3cwc_A Putative glycerate kina 70.8 8 0.00027 30.3 5.5 67 15-87 280-346 (383)
433 4g1k_A Triosephosphate isomera 69.9 14 0.00048 27.5 6.5 68 31-98 188-265 (272)
434 1rqb_A Transcarboxylase 5S sub 69.3 2 6.8E-05 35.1 1.8 48 44-91 80-140 (539)
435 2ftp_A Hydroxymethylglutaryl-C 69.3 16 0.00056 26.9 6.8 73 11-88 156-235 (302)
436 3c3w_A Two component transcrip 69.1 6.9 0.00024 26.8 4.5 67 10-85 34-101 (225)
437 3cpg_A Uncharacterized protein 69.1 7.8 0.00027 28.3 4.9 73 20-94 190-270 (282)
438 1efv_A Electron transfer flavo 68.9 29 0.001 26.0 8.2 74 37-110 9-84 (315)
439 3inp_A D-ribulose-phosphate 3- 68.9 30 0.001 25.1 10.4 86 14-106 44-132 (246)
440 2r91_A 2-keto-3-deoxy-(6-phosp 68.9 31 0.0011 25.2 11.2 81 24-109 31-119 (286)
441 1p1x_A Deoxyribose-phosphate a 68.8 5.4 0.00018 29.5 4.0 57 24-83 162-222 (260)
442 1w3i_A EDA, 2-keto-3-deoxy glu 68.7 32 0.0011 25.2 10.5 81 24-109 32-120 (293)
443 3obk_A Delta-aminolevulinic ac 68.6 39 0.0013 26.2 10.6 89 7-113 241-350 (356)
444 2a9o_A Response regulator; ess 68.3 16 0.00054 21.5 8.6 72 24-108 44-116 (120)
445 3nbk_A Phosphopantetheine aden 67.4 28 0.00096 24.1 8.0 70 14-90 39-110 (177)
446 2yci_X 5-methyltetrahydrofolat 67.4 26 0.0009 25.7 7.5 63 24-91 46-110 (271)
447 4ay7_A Methylcobalamin\: coenz 66.9 13 0.00046 27.8 6.0 65 24-89 202-270 (348)
448 1mzh_A Deoxyribose-phosphate a 66.9 26 0.0009 24.7 7.3 46 45-90 102-154 (225)
449 3gk0_A PNP synthase, pyridoxin 66.4 15 0.0005 27.6 5.9 104 2-112 157-270 (278)
450 4e69_A 2-dehydro-3-deoxyglucon 65.8 19 0.00065 26.4 6.6 86 14-105 137-236 (328)
451 3kxq_A Triosephosphate isomera 65.7 12 0.0004 28.0 5.3 68 30-97 185-265 (275)
452 2zad_A Muconate cycloisomerase 65.6 9.1 0.00031 28.6 4.8 47 40-87 216-264 (345)
453 3c85_A Putative glutathione-re 65.4 26 0.0009 23.1 7.2 68 11-90 92-161 (183)
454 1rd5_A Tryptophan synthase alp 65.3 34 0.0012 24.3 8.8 43 46-89 81-126 (262)
455 2hwg_A Phosphoenolpyruvate-pro 65.2 14 0.00047 30.3 6.1 85 3-90 426-528 (575)
456 1qpo_A Quinolinate acid phosph 65.2 13 0.00045 27.7 5.5 54 49-105 183-236 (284)
457 3tr9_A Dihydropteroate synthas 65.0 43 0.0015 25.3 10.0 66 24-91 61-135 (314)
458 2nx9_A Oxaloacetate decarboxyl 64.8 4.5 0.00016 32.3 3.1 48 44-91 63-123 (464)
459 3n0r_A Response regulator; sig 64.8 12 0.00042 27.1 5.3 87 9-111 191-278 (286)
460 1zlp_A PSR132, petal death pro 64.7 33 0.0011 26.0 7.7 101 5-109 42-167 (318)
461 2vef_A Dihydropteroate synthas 64.5 43 0.0015 25.2 9.9 85 15-103 38-127 (314)
462 3mcm_A 2-amino-4-hydroxy-6-hyd 64.1 13 0.00043 29.6 5.5 75 12-90 214-301 (442)
463 3th6_A Triosephosphate isomera 63.6 11 0.00038 27.7 4.8 64 31-94 161-238 (249)
464 2pgw_A Muconate cycloisomerase 63.5 14 0.00047 28.1 5.5 48 41-89 223-272 (384)
465 2jk1_A HUPR, hydrogenase trans 63.3 23 0.00079 21.7 9.9 72 24-107 43-116 (139)
466 3ta6_A Triosephosphate isomera 63.3 20 0.00067 26.6 6.1 71 31-101 168-252 (267)
467 2j48_A Two-component sensor ki 63.1 19 0.00066 20.7 5.8 52 25-85 45-98 (119)
468 1wa3_A 2-keto-3-deoxy-6-phosph 63.0 8 0.00027 26.4 3.8 53 24-85 34-87 (205)
469 3ke3_A Putative serine-pyruvat 63.0 32 0.0011 25.3 7.4 73 11-89 122-197 (379)
470 2oem_A 2,3-diketo-5-methylthio 63.0 54 0.0018 25.8 9.6 85 24-110 292-382 (413)
471 2hqr_A Putative transcriptiona 62.5 32 0.0011 23.0 9.4 68 24-108 43-113 (223)
472 3fwz_A Inner membrane protein 62.2 27 0.00093 22.1 7.6 66 11-88 59-125 (140)
473 3txv_A Probable tagatose 6-pho 62.2 3.2 0.00011 33.2 1.7 83 10-92 194-293 (450)
474 2nuw_A 2-keto-3-deoxygluconate 62.1 44 0.0015 24.4 11.0 81 24-109 32-120 (288)
475 1o4u_A Type II quinolic acid p 61.6 19 0.00066 26.8 5.9 55 48-105 180-235 (285)
476 1vcf_A Isopentenyl-diphosphate 61.5 10 0.00035 28.3 4.4 40 47-88 170-212 (332)
477 1zh2_A KDP operon transcriptio 61.5 22 0.00076 20.8 9.8 73 25-110 45-118 (121)
478 1fmt_A Methionyl-tRNA FMet for 61.5 30 0.001 25.8 7.0 84 1-90 4-90 (314)
479 1xky_A Dihydrodipicolinate syn 60.1 49 0.0017 24.4 11.2 82 24-109 45-135 (301)
480 2gwr_A DNA-binding response re 59.7 37 0.0013 23.1 6.8 71 25-108 49-120 (238)
481 3qfe_A Putative dihydrodipicol 59.6 52 0.0018 24.5 10.5 82 24-109 44-136 (318)
482 3cu2_A Ribulose-5-phosphate 3- 59.5 4.2 0.00014 29.5 1.9 85 13-106 29-115 (237)
483 1a2o_A CHEB methylesterase; ba 59.4 53 0.0018 24.6 11.7 78 25-110 49-129 (349)
484 1ihn_A Hypothetical protein MT 59.4 18 0.00061 23.2 4.7 44 69-112 49-103 (113)
485 1dos_A Aldolase class II; lyas 59.3 20 0.00069 27.7 5.7 81 11-91 197-291 (358)
486 2fiq_A Putative tagatose 6-pho 59.0 11 0.00036 29.9 4.2 81 10-92 187-285 (420)
487 2z06_A Putative uncharacterize 59.0 35 0.0012 24.9 6.8 53 47-101 18-77 (252)
488 1dcf_A ETR1 protein; beta-alph 59.0 27 0.00094 21.1 7.7 70 27-108 52-127 (136)
489 1o5k_A DHDPS, dihydrodipicolin 58.7 52 0.0018 24.3 10.2 82 24-109 45-135 (306)
490 3dzv_A 4-methyl-5-(beta-hydrox 58.6 35 0.0012 25.1 6.8 66 12-85 48-119 (273)
491 2ehh_A DHDPS, dihydrodipicolin 58.5 51 0.0017 24.1 11.7 82 24-109 33-123 (294)
492 3l9w_A Glutathione-regulated p 58.4 22 0.00077 27.5 6.0 67 9-87 54-121 (413)
493 2wkj_A N-acetylneuraminate lya 58.3 53 0.0018 24.2 11.1 83 24-110 44-135 (303)
494 1mdl_A Mandelate racemase; iso 58.1 14 0.00048 27.7 4.6 47 41-88 222-270 (359)
495 3cpr_A Dihydrodipicolinate syn 58.0 54 0.0018 24.2 11.2 82 24-109 49-139 (304)
496 1ydn_A Hydroxymethylglutaryl-C 57.8 27 0.00093 25.4 6.1 74 10-88 151-231 (295)
497 2ojp_A DHDPS, dihydrodipicolin 57.8 53 0.0018 24.0 8.9 82 24-109 34-124 (292)
498 1f6k_A N-acetylneuraminate lya 57.5 53 0.0018 24.0 10.2 82 24-109 37-127 (293)
499 2yxg_A DHDPS, dihydrodipicolin 57.4 53 0.0018 23.9 10.9 82 24-109 33-123 (289)
500 3dz1_A Dihydrodipicolinate syn 57.4 56 0.0019 24.2 10.2 82 24-110 41-130 (313)
No 1
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=100.00 E-value=1e-32 Score=204.81 Aligned_cols=111 Identities=50% Similarity=0.804 Sum_probs=104.1
Q ss_pred CceEEEecCCCCHHhHHHhHhCCC--CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGAN--PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAA 78 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~--~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~ 78 (115)
+|+|+++||+||++.+++++ + .+|+|++|+|+|||+||+|.+..++|++++|++.++++|+||||||.+|++++.
T Consensus 115 ~k~gvalnp~tp~~~~~~~l---~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~ 191 (227)
T 1tqx_A 115 LWCGISIKPKTDVQKLVPIL---DTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISA 191 (227)
T ss_dssp CEEEEEECTTSCGGGGHHHH---TTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHH
T ss_pred CeEEEEeCCCCcHHHHHHHh---hcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHH
Confidence 58999999999999999999 8 899999999999999999999999999999998778999999999999999999
Q ss_pred HcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHhhc
Q 033598 79 SAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQKN 114 (115)
Q Consensus 79 ~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~~ 114 (115)
++|||++|+||+||+++||++++++|++.+++.++|
T Consensus 192 ~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~~~~~~ 227 (227)
T 1tqx_A 192 SHGANIIVAGTSIFNAEDPKYVIDTMRVSVQKYLNN 227 (227)
T ss_dssp HHTCCEEEESHHHHTCSSHHHHHHHHHHHHHHC---
T ss_pred HcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999988877654
No 2
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.97 E-value=5.7e-32 Score=203.01 Aligned_cols=107 Identities=37% Similarity=0.705 Sum_probs=99.1
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh----CCCCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR----YPSLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~----~~~~~i~~dGGI~~~ni~~ 76 (115)
+|+|+++||.||++.+++++ +.+|+|++|+|+|||+||+|.+.+++||+++|++ +++++|+||||||++|+++
T Consensus 135 ~k~Gvalnp~Tp~e~l~~~l---~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~ 211 (246)
T 3inp_A 135 IQAGLALNPATGIDCLKYVE---SNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAE 211 (246)
T ss_dssp SEEEEEECTTCCSGGGTTTG---GGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHH
T ss_pred CeEEEEecCCCCHHHHHHHH---hcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHH
Confidence 58999999999999999999 8899999999999999999999999999999876 3569999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 77 AASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 77 l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+.++|||++|+||+||+++||++++++|++.+.+
T Consensus 212 ~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i~~ 245 (246)
T 3inp_A 212 IAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNK 245 (246)
T ss_dssp HHTTTCCEEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEEEehHHhCCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987753
No 3
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.97 E-value=1.6e-31 Score=198.31 Aligned_cols=109 Identities=57% Similarity=0.955 Sum_probs=104.4
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
+|+|+++||.||++.+++++ +.+|||++|+|+|||+||+|.+..++|++++|+..++++|+||||||++|++++.++
T Consensus 113 ~k~gval~p~t~~e~l~~~l---~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~a 189 (228)
T 3ovp_A 113 MKVGLAIKPGTSVEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEA 189 (228)
T ss_dssp CEEEEEECTTSCGGGTGGGG---GGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHh---ccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHc
Confidence 57999999999999999999 889999999999999999999999999999999988899999999999999999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHHHHHh
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~ 112 (115)
|||++|+||+||+++||++++++|++.++++.
T Consensus 190 GAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 190 GANMIVSGSAIMRSEDPRSVINLLRNVCSEAA 221 (228)
T ss_dssp TCCEEEESHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888754
No 4
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.97 E-value=1.2e-30 Score=193.99 Aligned_cols=107 Identities=35% Similarity=0.596 Sum_probs=101.1
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC----CCCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY----PSLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~----~~~~i~~dGGI~~~ni~~ 76 (115)
+|+|+++||+||++.+++++ +.+|+|++|+|+|||+||+|.+..++||+++|++. .+++|+||||||++|+++
T Consensus 107 ~k~gv~lnp~tp~~~~~~~l---~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~ 183 (231)
T 3ctl_A 107 MKVGLILNPETPVEAMKYYI---HKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEK 183 (231)
T ss_dssp CEEEEEECTTCCGGGGTTTG---GGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHH
T ss_pred CeEEEEEECCCcHHHHHHHH---hcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHH
Confidence 58999999999999999999 89999999999999999999999999999999864 379999999999999999
Q ss_pred HHHcCCCEEEEc-ccccCCCC-HHHHHHHHHHHHHH
Q 033598 77 AASAGANCIVAG-SSVFGAPE-PAHVISLMRKSVED 110 (115)
Q Consensus 77 l~~~Gad~iv~G-saif~~~d-~~~~~~~l~~~~~~ 110 (115)
+.++|||++|+| |+||+++| |++++++|++.+++
T Consensus 184 ~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~~~~ 219 (231)
T 3ctl_A 184 LMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQILA 219 (231)
T ss_dssp HHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHHHHH
Confidence 999999999999 99999888 99999999987765
No 5
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.96 E-value=8.9e-30 Score=190.14 Aligned_cols=104 Identities=20% Similarity=0.367 Sum_probs=98.0
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC----CCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP----SLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~----~~~i~~dGGI~~~ni~~ 76 (115)
+++|+++||+||++.+++++ +.+|||++|+|+|||+||+|.+..++||+++++... +++|+||||||.+|+++
T Consensus 127 ~~~gv~l~p~Tp~~~l~~~l---~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~ 203 (237)
T 3cu2_A 127 VLIGACLCPETPISELEPYL---DQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKY 203 (237)
T ss_dssp CEEEEEECTTSCGGGGTTTT---TTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHH
T ss_pred ceEEEEEeCCChHHHHHHHh---hcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHH
Confidence 47899999999999999999 899999999999999999999999999999998753 69999999999999999
Q ss_pred HHH--cCCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 77 AAS--AGANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 77 l~~--~Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
+.+ +|||++|+||+||++ ||++++++|++.+
T Consensus 204 ~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~~~~ 236 (237)
T 3cu2_A 204 FKQGTHQIDWLVSGSALFSG-ELKTNLKVWKSSI 236 (237)
T ss_dssp HHHSSSCCCCEEECGGGGSS-CHHHHHHHHHHHC
T ss_pred HHHhCCCCcEEEEeeHHhCC-CHHHHHHHHHHhh
Confidence 999 999999999999998 9999999998753
No 6
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.95 E-value=1e-28 Score=182.99 Aligned_cols=108 Identities=42% Similarity=0.688 Sum_probs=95.8
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC----CCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP----SLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~----~~~i~~dGGI~~~ni~~ 76 (115)
+++|+++||+||.+.+++++ +.+|||++|+++|||+||+|.+..+++|+++|+..+ ++||++|||||.+|+++
T Consensus 113 ~~~gv~~~p~t~~e~~~~~~---~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~ 189 (230)
T 1tqj_A 113 KKAGAVLNPSTPLDFLEYVL---PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQ 189 (230)
T ss_dssp CEEEEEECTTCCGGGGTTTG---GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHH
T ss_pred CcEEEEEeCCCcHHHHHHHH---hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHH
Confidence 47999999999999999999 889999999999999999999999999999988643 79999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 77 AASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 77 l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
+.++|||++|+||+||+++||++++++|++.++++
T Consensus 190 ~~~aGad~vvvGSai~~a~d~~~~~~~l~~~~~~~ 224 (230)
T 1tqj_A 190 VLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPE 224 (230)
T ss_dssp HHHHTCCEEEESHHHHTSSCHHHHHHHHHTCCC--
T ss_pred HHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998766543
No 7
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.95 E-value=1.7e-27 Score=175.43 Aligned_cols=112 Identities=80% Similarity=1.275 Sum_probs=103.1
Q ss_pred CceEEEecCCCCHHhHHHhHhCCC---CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGAN---PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEA 77 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~---~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l 77 (115)
+++|++++|+|+++.+++++ + .+|||++|+++||++||+|.+..+++++++++..+++|+.++||||.+|++++
T Consensus 114 ~~igv~~~p~t~~e~~~~~~---~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~ 190 (228)
T 1h1y_A 114 MRPGVSLRPGTPVEEVFPLV---EAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVA 190 (228)
T ss_dssp CEEEEEECTTSCGGGGHHHH---HSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHH
T ss_pred CCEEEEEeCCCCHHHHHHHH---hcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHH
Confidence 46899999999999999999 7 89999999999999999999999999999999877899999999999999999
Q ss_pred HHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHhhcC
Q 033598 78 ASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQKNS 115 (115)
Q Consensus 78 ~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~~~ 115 (115)
.++|||++|+||+||+++||++++++|++.+++.+.+|
T Consensus 191 ~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~~~~~~~ 228 (228)
T 1h1y_A 191 ASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS 228 (228)
T ss_dssp HHHTCCEEEESHHHHTSSCHHHHHHHHHHHHHHC----
T ss_pred HHcCCCEEEECHHHHCCCCHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999988766554
No 8
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.89 E-value=9.6e-24 Score=154.76 Aligned_cols=105 Identities=43% Similarity=0.748 Sum_probs=96.7
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC----CCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP----SLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~----~~~i~~dGGI~~~ni~~ 76 (115)
+++|++++|+|+.+.++++. +.+|||++|+++|||+||.|.+..+++++++++..+ ++|+.++||||++|+.+
T Consensus 119 ~~ig~~~~p~t~~e~~~~~~---~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~ 195 (230)
T 1rpx_A 119 AKAGVVLNPGTPLTAIEYVL---DAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYK 195 (230)
T ss_dssp SEEEEEECTTCCGGGGTTTT---TTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHH
T ss_pred CcEEEEeCCCCCHHHHHHHH---hhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHH
Confidence 36899999999999999988 889999999999999999999989999998887643 79999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 77 AASAGANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 77 l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
+.++|||++++||+||+++||.+++++|++.+
T Consensus 196 ~~~aGad~vvvgSaI~~a~dp~~a~~~l~~~~ 227 (230)
T 1rpx_A 196 VIEAGANALVAGSAVFGAPDYAEAIKGIKTSK 227 (230)
T ss_dssp HHHHTCCEEEESHHHHTSSCHHHHHHHHHTCC
T ss_pred HHHcCCCEEEEChhhhCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998644
No 9
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.89 E-value=3.7e-23 Score=150.08 Aligned_cols=106 Identities=43% Similarity=0.748 Sum_probs=96.9
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC----CCCcEEEEcCCChhhHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY----PSLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~----~~~~i~~dGGI~~~ni~~ 76 (115)
+++|++++|+|+.+.++++. +.+|||++|+++|||+||.|.+..+++++++++.. .++|+.++|||+++|+++
T Consensus 110 ~~i~~~~~~~t~~e~~~~~~---~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~ 186 (220)
T 2fli_A 110 MKAGVVINPGTPATALEPLL---DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRA 186 (220)
T ss_dssp SEEEEEECTTSCGGGGGGGT---TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHH
T ss_pred CcEEEEEcCCCCHHHHHHHH---hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHH
Confidence 36899999999999999988 88999999999999999999988888888888754 279999999999999999
Q ss_pred HHHcCCCEEEEcccccCCCCHHHHHHHHHHHHH
Q 033598 77 AASAGANCIVAGSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 77 l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
+.++|||++++||+||+++||++++++|++.++
T Consensus 187 ~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~~~ 219 (220)
T 2fli_A 187 CYEAGANVFVAGSYLFKASDLVSQVQTLRTALN 219 (220)
T ss_dssp HHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEEChHHhCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999987653
No 10
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.79 E-value=3.1e-20 Score=135.73 Aligned_cols=103 Identities=16% Similarity=0.294 Sum_probs=89.8
Q ss_pred ceEE-EecCCCCHHhHHHhHhCCCCCCEEEE-EeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHH
Q 033598 2 RPGV-ALKPGTSVEEVYPLVEGANPVEMVLV-MTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAAS 79 (115)
Q Consensus 2 k~Gl-al~p~t~~~~~~~~~~~~~~vD~vlv-m~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~ 79 (115)
++++ .++|.|+ +..+.+.+ .++||+.+ |++.|+++||.+.+..+++|++++. +++|++++|||+++|++++.+
T Consensus 111 ~~~~d~l~~~T~-~~~~~~~~--~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~~ 185 (218)
T 3jr2_A 111 EIQIEIYGNWTM-QDAKAWVD--LGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFEG 185 (218)
T ss_dssp EEEEECCSSCCH-HHHHHHHH--TTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGTT
T ss_pred ccceeeeecCCH-HHHHHHHH--cCccceeeeeccccccCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHHH
Confidence 5677 8899997 55565552 38999765 8889999999999999999999875 479999999999999999999
Q ss_pred cCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 80 AGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 80 ~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+|||++|+||+||+++||.+++ ++++.+++
T Consensus 186 aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 186 IKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp SCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred cCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 9999999999999999999999 99988875
No 11
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.77 E-value=4.5e-20 Score=134.01 Aligned_cols=103 Identities=16% Similarity=0.213 Sum_probs=92.4
Q ss_pred EEEecCCCCHHhHHHh-HhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh--hHHHHHHc
Q 033598 4 GVALKPGTSVEEVYPL-VEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS--TIAEAASA 80 (115)
Q Consensus 4 Glal~p~t~~~~~~~~-~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~--ni~~l~~~ 80 (115)
|++++|.|+.+.++++ + +.+|+++.|+++||++||.+.+...++++++|+..+.-++.+||||+.+ |+.++.++
T Consensus 101 gv~vl~~t~~~~~~~~~~---~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~a 177 (208)
T 2czd_A 101 EIIMVVEMSHPGALEFIN---PLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKA 177 (208)
T ss_dssp EEEEECCCCSGGGGTTTG---GGHHHHHHHHHHHCCSEEECCCSSTHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHH
T ss_pred CcEEEEecCCcchhhHHH---HHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHc
Confidence 8999999999988776 6 7789999999999999999999888899999887654234599999998 99999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHHH
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
|||++|+||+||+++||.++++++++.++
T Consensus 178 Gad~vvvGr~I~~a~dp~~~~~~l~~~i~ 206 (208)
T 2czd_A 178 GADYIIVGRAIYNAPNPREAAKAIYDEIR 206 (208)
T ss_dssp TCSEEEECHHHHTSSSHHHHHHHHHHHHC
T ss_pred CCCEEEEChHHhcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999998764
No 12
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.76 E-value=2.1e-18 Score=124.34 Aligned_cols=104 Identities=20% Similarity=0.252 Sum_probs=91.1
Q ss_pred ceEEE-ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVA-LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Gla-l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
++++. ++|.|+.+.++.+.+ .++|+| .++||++||.+.+..+++++++++..+++|+.++|||+++|+..+.++
T Consensus 105 ~~~v~~~~~~t~~~~~~~~~~--~g~d~i---~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~ 179 (211)
T 3f4w_A 105 QVVVDMICVDDLPARVRLLEE--AGADML---AVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALL 179 (211)
T ss_dssp EEEEECTTCSSHHHHHHHHHH--HTCCEE---EEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTT
T ss_pred eEEEEecCCCCHHHHHHHHHH--cCCCEE---EEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHc
Confidence 56675 678888888888772 369986 467999999987667889999998877899999999999999999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
|||.+++||+||+++||.++++++++.+++
T Consensus 180 Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 180 GPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp CCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred CCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999988775
No 13
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.71 E-value=8.2e-18 Score=120.95 Aligned_cols=99 Identities=19% Similarity=0.227 Sum_probs=80.5
Q ss_pred ceEEEec-CCCCHHhHHHhHhCCCCCCEE-EEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHH
Q 033598 2 RPGVALK-PGTSVEEVYPLVEGANPVEMV-LVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAAS 79 (115)
Q Consensus 2 k~Glal~-p~t~~~~~~~~~~~~~~vD~v-lvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~ 79 (115)
++|+++. ++||-+.++.+.+ .++||| +.|++.|++.|+++.+ +++++++.. ++|+.++|||+++|++++.+
T Consensus 105 ~~gv~~~s~~~p~~~~~~~~~--~g~d~v~~~~~~~~~~~g~~~~~---~~i~~~~~~--~~pi~v~GGI~~~~~~~~~~ 177 (207)
T 3ajx_A 105 GVVVDLIGIEDKATRAQEVRA--LGAKFVEMHAGLDEQAKPGFDLN---GLLAAGEKA--RVPFSVAGGVKVATIPAVQK 177 (207)
T ss_dssp EEEEECTTCSSHHHHHHHHHH--TTCSEEEEECCHHHHTSTTCCTH---HHHHHHHHH--TSCEEEESSCCGGGHHHHHH
T ss_pred ceEEEEecCCChHHHHHHHHH--hCCCEEEEEecccccccCCCchH---HHHHHhhCC--CCCEEEECCcCHHHHHHHHH
Confidence 4677663 4455554444431 358999 8888888888988765 778888765 68999999999999999999
Q ss_pred cCCCEEEEcccccCCCCHHHHHHHHHHH
Q 033598 80 AGANCIVAGSSVFGAPEPAHVISLMRKS 107 (115)
Q Consensus 80 ~Gad~iv~Gsaif~~~d~~~~~~~l~~~ 107 (115)
+|||++++||+||+++||.++++++++.
T Consensus 178 aGad~vvvGsaI~~~~dp~~~~~~~~~~ 205 (207)
T 3ajx_A 178 AGAEVAVAGGAIYGAADPAAAAKELRAA 205 (207)
T ss_dssp TTCSEEEESHHHHTSSSHHHHHHHHHHT
T ss_pred cCCCEEEEeeeccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999864
No 14
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.68 E-value=2.9e-18 Score=127.76 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=88.3
Q ss_pred EEEecCCCCH--HhH-HHh---HhCCCCCCEEEEEeee-CCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh----
Q 033598 4 GVALKPGTSV--EEV-YPL---VEGANPVEMVLVMTVE-PGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS---- 72 (115)
Q Consensus 4 Glal~p~t~~--~~~-~~~---~~~~~~vD~vlvm~v~-pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~---- 72 (115)
+++++|.|+. +.+ +++ + +..|+|+.|++. |+++++.|.....+ ++++|+..+..++.+||||+++
T Consensus 117 ~lav~~~Ts~~~~~l~~~~~~~~---~~~d~Vl~ma~~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~V~gGI~~~g~~~ 192 (246)
T 2yyu_A 117 CIAVTQLTSTDERMLHEELWISR---PLVETVAHYAALAKESGLDGVVCSANE-AAFIKERCGASFLAVTPGIRFADDAA 192 (246)
T ss_dssp EEEESSCTTCCHHHHHHTSCCCS---CHHHHHHHHHHHHHHHTCCEEECCHHH-HHHHHHHHCTTSEEEECCCCCCC---
T ss_pred EEEEEeCCCCCHHHHHHHhcCCC---CHHHHHHHHHHHHHHhCCCEEEeCHHH-HHHHHHhcCCCCEEEeCCcCCCCCCc
Confidence 5889999995 777 665 3 557999999886 88888889888877 8888877544449999999999
Q ss_pred -------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHhhc
Q 033598 73 -------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQKN 114 (115)
Q Consensus 73 -------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~~ 114 (115)
|+.++.++|+|++|+||+||+++||.++++++++.++++++.
T Consensus 193 ~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~~~~~~ 241 (246)
T 2yyu_A 193 HDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEWNGGERE 241 (246)
T ss_dssp ----CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHCC-----
T ss_pred ccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999988766543
No 15
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.67 E-value=1.5e-16 Score=118.87 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=82.5
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCChhhHHHHHHcCCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~~~ni~~l~~~Gad~iv 86 (115)
+.+|+.|..+... .++|||.+++++|..+.+...+..++.++++++.. .++|++++||||++|+.++.++|||.++
T Consensus 141 S~ht~~Ea~~A~~---~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gva 217 (243)
T 3o63_A 141 STHDPDQVAAAAA---GDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIV 217 (243)
T ss_dssp EECSHHHHHHHHH---SSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEE
T ss_pred eCCCHHHHHHHhh---CCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEE
Confidence 4577777666555 78999999999998877665566788899888763 4799999999999999999999999999
Q ss_pred EcccccCCCCHHHHHHHHHHHHHH
Q 033598 87 AGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 87 ~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+||+||+++||.+++++|++.+++
T Consensus 218 v~sai~~a~dp~~a~~~l~~~~~~ 241 (243)
T 3o63_A 218 VVRAITSADDPRAAAEQLRSALTA 241 (243)
T ss_dssp ESHHHHTCSSHHHHHHHHHHHHHT
T ss_pred EeHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999988765
No 16
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.66 E-value=1.7e-16 Score=116.86 Aligned_cols=105 Identities=15% Similarity=0.256 Sum_probs=82.4
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEE-EeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLV-MTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlv-m~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
++|++++++|+.+.++++++ ..+|++.+ |+..++++|+-..+.-++++++... ++++|+|||||+++|.+.+.++
T Consensus 113 ~~~Vt~lts~~~~~~~~~~~--~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~--~~~~i~v~gGI~~~~~~~~~~a 188 (221)
T 3exr_A 113 EIQVELYGDWTYDQAQQWLD--AGISQAIYHQSRDALLAGETWGEKDLNKVKKLIE--MGFRVSVTGGLSVDTLKLFEGV 188 (221)
T ss_dssp EEEEECCSSCCHHHHHHHHH--TTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHH--HTCEEEEESSCCGGGGGGGTTC
T ss_pred eEEEEEcCCCCHHHHHHHHc--CCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhc--CCceEEEECCCCHHHHHHHHHC
Confidence 57999999999999888872 26766544 5555555665433333444444332 3688999999999999999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
|||++|+||+||+++||.++++++++.+++
T Consensus 189 Gad~~VvG~~I~~a~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 189 DVFTFIAGRGITEAKNPAGAARAFKDEIKR 218 (221)
T ss_dssp CCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEECchhhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999988875
No 17
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.66 E-value=2.3e-17 Score=120.17 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=78.2
Q ss_pred ceEEEec-C--CCCHHhHHHhHhCCCCCCEEE---EEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCChhhH
Q 033598 2 RPGVALK-P--GTSVEEVYPLVEGANPVEMVL---VMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLGPSTI 74 (115)
Q Consensus 2 k~Glal~-p--~t~~~~~~~~~~~~~~vD~vl---vm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~~~ni 74 (115)
++|+.+. + .|+.+.++++ ...|+++ .|+++|||+| ..++++++|+..+ ++|+.++|||+++|+
T Consensus 108 ~~~~~ll~~~t~~~~~~l~~~----~~~~~vl~~a~~~~~~G~~g------~~~~i~~lr~~~~~~~~i~v~GGI~~~~~ 177 (216)
T 1q6o_A 108 DVQIELTGYWTWEQAQQWRDA----GIGQVVYHRSRDAQAAGVAW------GEADITAIKRLSDMGFKVTVTGGLALEDL 177 (216)
T ss_dssp EEEEEECSCCCHHHHHHHHHT----TCCEEEEECCHHHHHTTCCC------CHHHHHHHHHHHHTTCEEEEESSCCGGGG
T ss_pred CceeeeeeCCChhhHHHHHhc----CcHHHHHHHHHHHHhcCCCC------CHHHHHHHHHhcCCCCcEEEECCcChhhH
Confidence 4566344 4 4555555442 4567888 8899999998 3455666665543 688999999999999
Q ss_pred HHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 75 AEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 75 ~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
.++.++|||++|+||+||+++||.++++++++.+++
T Consensus 178 ~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 178 PLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp GGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988765
No 18
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.64 E-value=2.4e-16 Score=116.20 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=83.3
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCC-EEEEEeeeCCCCCcc--cchhHHHHHHHHHhhCCCCcEEEEcCCCh-hhHHHH
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVE-MVLVMTVEPGFGGQK--FMPEMMDKVRSLRNRYPSLDIEVDGGLGP-STIAEA 77 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD-~vlvm~v~pG~~gq~--~~~~~~~ki~~l~~~~~~~~i~~dGGI~~-~ni~~l 77 (115)
++++.++|.|+.+.++.+. ..+| ++.+|++ ||++|++ +.+..++.++++++.. ++|+.++|||+. +|+..+
T Consensus 135 ~~~~~i~~~t~~e~~~~~~---~~~d~~i~~~~~-~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~ 209 (248)
T 1geq_A 135 KTVFLAAPNTPDERLKVID---DMTTGFVYLVSL-YGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSL 209 (248)
T ss_dssp EEEEEECTTCCHHHHHHHH---HHCSSEEEEECC-C-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHH
T ss_pred CeEEEECCCCHHHHHHHHH---hcCCCeEEEEEC-CccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHH
Confidence 5788999999999999998 6678 9988999 9998886 6677889999999875 799999999999 999999
Q ss_pred HHcCCCEEEEcccccCCC--CHHHHHHHHHHHHHHHh
Q 033598 78 ASAGANCIVAGSSVFGAP--EPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 78 ~~~Gad~iv~Gsaif~~~--d~~~~~~~l~~~~~~~~ 112 (115)
.++|||.+++||+||+.. ++ ++++++.+.+++..
T Consensus 210 ~~~Gad~vivGsai~~~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 210 LKEGANGVVVGSALVKIIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHTTCSEEEECHHHHHHHHHHG-GGCHHHHHHHHHHH
T ss_pred HHcCCCEEEEcHHHHhhHhhCh-HHHHHHHHHHHHHh
Confidence 999999999999999752 34 56666666555543
No 19
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.64 E-value=1.2e-17 Score=124.48 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=85.8
Q ss_pred EEEecC--CCCHHhHHHhHhCCCCCCEEEEEee-eCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh--------
Q 033598 4 GVALKP--GTSVEEVYPLVEGANPVEMVLVMTV-EPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS-------- 72 (115)
Q Consensus 4 Glal~p--~t~~~~~~~~~~~~~~vD~vlvm~v-~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~-------- 72 (115)
++++++ +++.+.++++..+.+..|+|+.|++ .|+++++.|....++ ++++|+..++.++.+||||+++
T Consensus 124 ~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~ 202 (245)
T 1eix_A 124 LIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQE-AVRFKQVFGQEFKLVTPGIRPQGSEAGDQR 202 (245)
T ss_dssp EEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGGG-HHHHHHHHCSSSEEEECCBCCTTCCCTTCC
T ss_pred EEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHHH-HHHHHHhcCCCCEEEECCcCCCCCCccchh
Confidence 445554 5555888876100156799999988 788888889888877 8888877655689999999999
Q ss_pred ---hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHH
Q 033598 73 ---TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 73 ---ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
|+.++.++|+|++|+||+||+++||.++++++++.++
T Consensus 203 rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 242 (245)
T 1eix_A 203 RIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ 242 (245)
T ss_dssp SCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987654
No 20
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.64 E-value=8.6e-16 Score=111.42 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=85.8
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc-cchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCE
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK-FMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANC 84 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~-~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~ 84 (115)
.++++|+.+..+.+. .++||++++++.|+++++. +.+..++.++++++..+++|+.++|||+++|+.++.++|+|.
T Consensus 120 ~~s~~t~~e~~~a~~---~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~g 196 (227)
T 2tps_A 120 GVSAHTMSEVKQAEE---DGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADG 196 (227)
T ss_dssp EEEECSHHHHHHHHH---HTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSE
T ss_pred EEecCCHHHHHHHHh---CCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCE
Confidence 345677777555444 6899999999999877655 455567788888876545999999999999999999999999
Q ss_pred EEEcccccCCCCHHHHHHHHHHHHHHHh
Q 033598 85 IVAGSSVFGAPEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 85 iv~Gsaif~~~d~~~~~~~l~~~~~~~~ 112 (115)
+++||++|+++|+.+.++++++.++.++
T Consensus 197 v~vgs~i~~~~d~~~~~~~~~~~~~~~~ 224 (227)
T 2tps_A 197 VSMISAISQAEDPESAARKFREEIQTYK 224 (227)
T ss_dssp EEESHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred EEEhHHhhcCCCHHHHHHHHHHHHHhcc
Confidence 9999999998999999999998887654
No 21
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.63 E-value=1.8e-17 Score=122.87 Aligned_cols=106 Identities=20% Similarity=0.223 Sum_probs=86.4
Q ss_pred EEEec--CCCCHHhH-HHh-HhCCCCCCEEEEEeee-CCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhH----
Q 033598 4 GVALK--PGTSVEEV-YPL-VEGANPVEMVLVMTVE-PGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTI---- 74 (115)
Q Consensus 4 Glal~--p~t~~~~~-~~~-~~~~~~vD~vlvm~v~-pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni---- 74 (115)
++++. ++++.+.+ +++ +.. +..|+|+.|++. |+++++.|.... ++++++|+..++.++.+||||++++.
T Consensus 116 ~~~V~~~ts~~~~~l~~~~~~~~-~~~d~Vl~ma~~~~~~G~~g~v~~~-~~i~~lr~~~~~~~i~v~gGI~~~~~~~~d 193 (239)
T 1dbt_A 116 LIAVTQLTSTSEQIMKDELLIEK-SLIDTVVHYSKQAEESGLDGVVCSV-HEAKAIYQAVSPSFLTVTPGIRMSEDAAND 193 (239)
T ss_dssp EEEECSCTTCCHHHHHHTSCBCS-CHHHHHHHHHHHHHHTTCSEEECCG-GGHHHHTTTSCTTCEEEECCBCCTTSCCTT
T ss_pred EEEEEEcCCCCHHHHHHHhccCC-CHHHHHHHHHHHHHHhCCCEEEECH-HHHHHHHHhcCCCcEEEeCCcCCCCCCccc
Confidence 45555 45555777 665 421 347999999886 888888888776 78899988765578999999999998
Q ss_pred -------HHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 75 -------AEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 75 -------~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
.++.++|+|++|+||+||+++||.++++++++.+++.
T Consensus 194 q~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~~~ 237 (239)
T 1dbt_A 194 QVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGI 237 (239)
T ss_dssp CSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTC
T ss_pred eeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999887643
No 22
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.63 E-value=3.3e-15 Score=108.59 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=79.9
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
++|+.+ +|+.+..+... .++|||+++++.++.......+..++.++++++.. ++|+.++||||++|+.++.++|
T Consensus 112 ~ig~sv--~t~~~~~~a~~---~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI~~~nv~~~~~~G 185 (221)
T 1yad_A 112 HIGRSV--HSLEEAVQAEK---EDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGMTPDRLRDVKQAG 185 (221)
T ss_dssp EEEEEE--CSHHHHHHHHH---TTCSEEEEECCC----------CHHHHHHHHHHHC-CSCEEEESSCCGGGHHHHHHTT
T ss_pred EEEEEc--CCHHHHHHHHh---CCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECCCCHHHHHHHHHcC
Confidence 456655 46666666555 78999999887554221111245678888887765 7999999999999999999999
Q ss_pred CCEEEEcccccCCCCHHHHHHHHHHHHHHHh
Q 033598 82 ANCIVAGSSVFGAPEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 82 ad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~ 112 (115)
||++++||++|+++|+.+.++++++.++...
T Consensus 186 a~gv~vgs~i~~~~d~~~~~~~~~~~~~~~~ 216 (221)
T 1yad_A 186 ADGIAVMSGIFSSAEPLEAARRYSRKLKEMR 216 (221)
T ss_dssp CSEEEESHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEhHHhhCCCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998887654
No 23
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.63 E-value=1.7e-15 Score=108.78 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=81.4
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
.++|+.+..+.+. .++|||+++++.|+.+++.+.+..++.++++++.. ++|+.++|||+++|+.++.++|+|.+++
T Consensus 114 ~~~t~~e~~~~~~---~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~v 189 (215)
T 1xi3_A 114 SVYSLEEALEAEK---KGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV-KIPVVAIGGINKDNAREVLKTGVDGIAV 189 (215)
T ss_dssp EESSHHHHHHHHH---HTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC-SSCEEEESSCCTTTHHHHHTTTCSEEEE
T ss_pred ecCCHHHHHHHHh---cCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC-CCCEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 3467766555444 68999999998888766656667788888888765 7999999999999999999999999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
||++|+.+|+.+.++++++.+++.
T Consensus 190 gs~i~~~~d~~~~~~~~~~~~~~~ 213 (215)
T 1xi3_A 190 ISAVMGAEDVRKATEELRKIVEEV 213 (215)
T ss_dssp SHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred hHHHhCCCCHHHHHHHHHHHHhhc
Confidence 999999999999999999887754
No 24
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.55 E-value=2.3e-14 Score=106.80 Aligned_cols=104 Identities=14% Similarity=0.300 Sum_probs=83.2
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCc--ccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHH
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQ--KFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAA 78 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq--~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~ 78 (115)
+..+.++|+|+.+.++.+... ..+|+.++++ +|++|+ .+.+..++.++++++.. ++||.++|||+ ++|+..+.
T Consensus 145 ~~i~~~a~~t~~e~~~~~~~~--~~g~v~~~s~-~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~ 220 (262)
T 1rd5_A 145 ELVLLTTPAIPEDRMKEITKA--SEGFVYLVSV-NGVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIA 220 (262)
T ss_dssp EECEEECTTSCHHHHHHHHHH--CCSCEEEECS-SCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHH
T ss_pred ceEEEECCCCCHHHHHHHHhc--CCCeEEEecC-CCCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHH
Confidence 356778999999988887733 3368988886 899988 66677888999998875 79999999999 99999999
Q ss_pred HcCCCEEEEcccccCC----CCHHHHHHHHHHHHH
Q 033598 79 SAGANCIVAGSSVFGA----PEPAHVISLMRKSVE 109 (115)
Q Consensus 79 ~~Gad~iv~Gsaif~~----~d~~~~~~~l~~~~~ 109 (115)
++|||.+++||+|++. .++.+....+++.++
T Consensus 221 ~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~ 255 (262)
T 1rd5_A 221 QWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYAR 255 (262)
T ss_dssp HTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHH
T ss_pred HcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHH
Confidence 9999999999999964 245554445555444
No 25
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.52 E-value=5.3e-14 Score=105.72 Aligned_cols=105 Identities=15% Similarity=0.233 Sum_probs=80.7
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCc--ccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHH
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQ--KFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAA 78 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq--~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~ 78 (115)
+.+..++|+|+.+.++.+... .-+++.+|++. |++|| ++.+...++++++|+.. ++|+.++|||+ ++++..+.
T Consensus 149 ~~i~l~~p~t~~~~i~~i~~~--~~g~v~~~s~~-G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~ 224 (268)
T 1qop_A 149 APIFICPPNADDDLLRQVASY--GRGYTYLLSRS-GVTGAENRGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAV 224 (268)
T ss_dssp EEECEECTTCCHHHHHHHHHH--CCSCEEEESSS-SCCCSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHhh--CCCcEEEEecC-CcCCCccCCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHH
Confidence 456778999999998888843 23478888777 99998 66777888999999875 79999999998 99999988
Q ss_pred HcCCCEEEEcccccCC-----CCHHHHHHHHHHHHHH
Q 033598 79 SAGANCIVAGSSVFGA-----PEPAHVISLMRKSVED 110 (115)
Q Consensus 79 ~~Gad~iv~Gsaif~~-----~d~~~~~~~l~~~~~~ 110 (115)
.+|||++|+||+|++. .++.....++++.+++
T Consensus 225 ~agAD~vVVGSai~~~~~~~~~~~~~~~~~~~~~~~~ 261 (268)
T 1qop_A 225 RAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSA 261 (268)
T ss_dssp HTTCSEEEECHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEChHHhhhHhhcccCchHHHHHHHHHHHH
Confidence 9999999999999864 2334334445544443
No 26
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.50 E-value=4.6e-14 Score=115.51 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=83.5
Q ss_pred eEEEecCCCCHHhHHHhHhCCCC---CCEEEEEeeeCCCCCccc--chhHHHHHHHHHhh-----CCCCcEEEEcCCChh
Q 033598 3 PGVALKPGTSVEEVYPLVEGANP---VEMVLVMTVEPGFGGQKF--MPEMMDKVRSLRNR-----YPSLDIEVDGGLGPS 72 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~---vD~vlvm~v~pG~~gq~~--~~~~~~ki~~l~~~-----~~~~~i~~dGGI~~~ 72 (115)
+|+.. +|+.|..+... .+ +|||.+++++|..+++.. .+..++.++++++. ..++|++++|||+++
T Consensus 111 iG~S~--ht~eea~~A~~---~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ 185 (540)
T 3nl6_A 111 IGWSV--GFPEEVDELSK---MGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPD 185 (540)
T ss_dssp EEEEE--CSHHHHHHHHH---TCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCCTT
T ss_pred EEEEC--CCHHHHHHHHH---cCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCCHH
Confidence 45555 46666666655 67 999999999999888765 34556667666654 247999999999999
Q ss_pred hHHHHHH--------cCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 73 TIAEAAS--------AGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 73 ni~~l~~--------~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
|++++.+ +|+|+++++|+||+++||.+++++|++.+++
T Consensus 186 ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 186 NIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp THHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 9999997 8999999999999999999999999998875
No 27
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.44 E-value=4.2e-13 Score=96.77 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=75.6
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
++|+.+..+... .++|||++ +|+ + +..+++++++++..+ ++|+.++|||+.+|+.++.++|||.+++
T Consensus 108 ~~t~~e~~~a~~---~G~d~v~v---~~t---~---~~g~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 108 CATATEAFTALE---AGAQALKI---FPS---S---AFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp ECSHHHHHHHHH---TTCSEEEE---TTH---H---HHCHHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHH---CCCCEEEE---ecC---C---CCCHHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 567777766666 78999985 553 2 345688888888765 6999999999999999999999999999
Q ss_pred cccccCC----CCHHHHHHHHHHHHHHH
Q 033598 88 GSSVFGA----PEPAHVISLMRKSVEDA 111 (115)
Q Consensus 88 Gsaif~~----~d~~~~~~~l~~~~~~~ 111 (115)
||++|++ +||.+.+++|++.+++.
T Consensus 176 Gsai~~~~~~~~d~~~~~~~l~~~~~~~ 203 (212)
T 2v82_A 176 GSDLYRAGQSVERTAQQAAAFVKAYREA 203 (212)
T ss_dssp CTTTCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ChHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999997 68999999999888763
No 28
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.37 E-value=9.4e-13 Score=96.18 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=77.5
Q ss_pred EEEecCCCCHHhHHHhHhCCCCCCEE--EEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHc
Q 033598 4 GVALKPGTSVEEVYPLVEGANPVEMV--LVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASA 80 (115)
Q Consensus 4 Glal~p~t~~~~~~~~~~~~~~vD~v--lvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~ 80 (115)
.+.++++|+.+....+. .++|+| .+++++|++ +.+....++.++++++. ++|+.++|||+ .+++..+.++
T Consensus 135 ~v~~~~~t~~ea~~a~~---~Gad~i~~~v~g~~~~~--~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~ 207 (234)
T 1yxy_A 135 LLMADISTFDEGLVAHQ---AGIDFVGTTLSGYTPYS--RQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDL 207 (234)
T ss_dssp EEEEECSSHHHHHHHHH---TTCSEEECTTTTSSTTS--CCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTT
T ss_pred eEEEeCCCHHHHHHHHH---cCCCEEeeeccccCCCC--cCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHC
Confidence 45667888877766666 789999 788888765 33334456778888765 79999999999 9999999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHHH
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
|||.+++||++|+ |...+++|++.++
T Consensus 208 Gad~v~vGsal~~---p~~~~~~l~~~~~ 233 (234)
T 1yxy_A 208 GVAGIVVGGAITR---PKEIAERFIEALK 233 (234)
T ss_dssp CCSEEEECHHHHC---HHHHHHHHHHHTC
T ss_pred CCCEEEEchHHhC---hHHHHHHHHHHHh
Confidence 9999999999997 8888888877653
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.33 E-value=5.3e-12 Score=90.39 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=56.1
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCC---HHHHHHHHHHHHHHH
Q 033598 46 EMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPE---PAHVISLMRKSVEDA 111 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d---~~~~~~~l~~~~~~~ 111 (115)
...+.++++++..+++|+.++|||+.+|+.++.++|||.+++||++|+ +| +.+.++++++.+++.
T Consensus 136 ~g~~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~~~ 203 (205)
T 1wa3_A 136 VGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIRGC 203 (205)
T ss_dssp HHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHHhh
Confidence 345667777766668999999999999999999999999999999999 89 889999888887653
No 30
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.31 E-value=1.1e-11 Score=89.66 Aligned_cols=94 Identities=12% Similarity=0.185 Sum_probs=73.4
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCccc----chhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHc
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKF----MPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASA 80 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~----~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~ 80 (115)
.+++.|+.+..+... .++|+|. ..++||+++.+ ....++.++++++.. ++|+.++||| |.+++..+.++
T Consensus 123 ~~~~~t~~e~~~~~~---~G~d~i~--~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~ 196 (223)
T 1y0e_A 123 MADIATVEEAKNAAR---LGFDYIG--TTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDL 196 (223)
T ss_dssp EEECSSHHHHHHHHH---TTCSEEE--CTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHT
T ss_pred EecCCCHHHHHHHHH---cCCCEEE--eCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHc
Confidence 457778777655444 6799974 56778887765 334566777877764 7999999999 99999999999
Q ss_pred CCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 81 GANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 81 Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
|||.+++||+||+ +....++|++.+
T Consensus 197 Gad~v~vG~al~~---p~~~~~~~~~~~ 221 (223)
T 1y0e_A 197 GVHCSVVGGAITR---PKEITKRFVQVM 221 (223)
T ss_dssp TCSEEEECHHHHC---HHHHHHHHHHTT
T ss_pred CCCEEEEChHHcC---cHHHHHHHHHHh
Confidence 9999999999997 777777776544
No 31
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.25 E-value=2.4e-11 Score=88.37 Aligned_cols=89 Identities=15% Similarity=0.158 Sum_probs=68.9
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
...|+-|..+..- .++|||.+ +|. ... ..++.+++++...+++|+.+.||||.+|+.++.++|++.+++
T Consensus 110 G~~t~~e~~~A~~---~Gad~v~~---fpa---~~~--gG~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vav 178 (207)
T 2yw3_A 110 GVLTPTEVERALA---LGLSALKF---FPA---EPF--QGVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVG 178 (207)
T ss_dssp EECSHHHHHHHHH---TTCCEEEE---TTT---TTT--THHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEE
T ss_pred cCCCHHHHHHHHH---CCCCEEEE---ecC---ccc--cCHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEE
Confidence 4567666666655 78999976 552 111 145668888888789999999999999999999999999999
Q ss_pred cccccCCCC---HHHHHHHHHHHH
Q 033598 88 GSSVFGAPE---PAHVISLMRKSV 108 (115)
Q Consensus 88 Gsaif~~~d---~~~~~~~l~~~~ 108 (115)
||+||+ +| +.+.++++.+.+
T Consensus 179 gSai~~-~d~~~i~~~a~~~~~~~ 201 (207)
T 2yw3_A 179 GSWLLQ-GNLEAVRAKVRAAKALL 201 (207)
T ss_dssp ESGGGS-SCHHHHHHHHHHHHHHC
T ss_pred ehhhhC-CCHHHHHHHHHHHHHHh
Confidence 999998 88 566666665544
No 32
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=3.8e-12 Score=92.26 Aligned_cols=77 Identities=9% Similarity=0.123 Sum_probs=56.5
Q ss_pred CCCCEEEEEeeeCCCCCccc-chhHHHHHHHHHhhC-CCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKF-MPEMMDKVRSLRNRY-PSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~-~~~~~~ki~~l~~~~-~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
.++|||.+.++.|..+.... .+..++.++++++.. .++|+.+.|||+++|+.++.++|++.+.++|+||+.+|+.+.
T Consensus 106 ~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s~i~~~~d~~~~ 184 (210)
T 3ceu_A 106 HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLGDLWNKFDACLD 184 (210)
T ss_dssp GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESHHHHTTCCTTTS
T ss_pred hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhHHhHcCCCHHHH
Confidence 46999999888765432111 122445567776653 479999999999999999999999999999999998888533
No 33
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.22 E-value=5.3e-11 Score=89.88 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=77.9
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCC-CEEEEEeeeCCCCCcc-cchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHH
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPV-EMVLVMTVEPGFGGQK-FMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAA 78 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~v-D~vlvm~v~pG~~gq~-~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~ 78 (115)
+....++|.|+.+.++.+. ... ++|.++++.+.++.+. +.+...+.++++|+.. +.|+.+.|||+ +++++...
T Consensus 150 ~~i~liaP~t~~eri~~i~---~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~ 225 (267)
T 3vnd_A 150 APIFIAPPNADADTLKMVS---EQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAI 225 (267)
T ss_dssp EEECEECTTCCHHHHHHHH---HHCCSCEEESCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHH---HhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHH
Confidence 3556789999999999988 544 5888888887666664 5666778899998874 79999999995 99999888
Q ss_pred HcCCCEEEEcccccC-----CCCHHHHHHHHHHHHHH
Q 033598 79 SAGANCIVAGSSVFG-----APEPAHVISLMRKSVED 110 (115)
Q Consensus 79 ~~Gad~iv~Gsaif~-----~~d~~~~~~~l~~~~~~ 110 (115)
..|||++|+||+|++ .+++.+..+.+++..++
T Consensus 226 ~~gADgvVVGSaiv~~i~~~~~~~~~~~~~~~~~~~~ 262 (267)
T 3vnd_A 226 KAGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTA 262 (267)
T ss_dssp HTTCSEEEECHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HcCCCEEEECHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 999999999999986 12455555566555443
No 34
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.21 E-value=2.3e-11 Score=89.19 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=69.4
Q ss_pred ceEEEecCC--------------CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc
Q 033598 2 RPGVALKPG--------------TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG 67 (115)
Q Consensus 2 k~Glal~p~--------------t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG 67 (115)
++++++++. |+++..+.+.+ .++|.|+++++.+++.+|.+..+. ++++++.. ++|+.++|
T Consensus 124 ~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~--~G~~~i~~~~~~~~~~~~g~~~~~---~~~i~~~~-~ipvia~G 197 (244)
T 1vzw_A 124 KIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK--EGCARYVVTDIAKDGTLQGPNLEL---LKNVCAAT-DRPVVASG 197 (244)
T ss_dssp GEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH--TTCCCEEEEEC-------CCCHHH---HHHHHHTC-SSCEEEES
T ss_pred cEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh--CCCCEEEEeccCcccccCCCCHHH---HHHHHHhc-CCCEEEEC
Confidence 356777765 77787777762 369999999999988777775444 55555543 79999999
Q ss_pred CCCh-hhHHHHHHc---CCCEEEEcccccCCC-CHHHHHHHH
Q 033598 68 GLGP-STIAEAASA---GANCIVAGSSVFGAP-EPAHVISLM 104 (115)
Q Consensus 68 GI~~-~ni~~l~~~---Gad~iv~Gsaif~~~-d~~~~~~~l 104 (115)
||+. +++..+.++ |+|.+++||++|+.+ ++.+..+.+
T Consensus 198 GI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 198 GVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp CCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHh
Confidence 9995 999999999 999999999999876 555555443
No 35
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.17 E-value=1.9e-10 Score=84.48 Aligned_cols=90 Identities=19% Similarity=0.202 Sum_probs=72.2
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
++++.++.+.+ .++|.|+++++.++...+.+. ++.++++++.. ++|+.+.|||+ ++++..+.++|+|.+++||
T Consensus 152 ~~~e~~~~~~~--~G~~~i~~~~~~~~g~~~g~~---~~~~~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vGs 225 (253)
T 1thf_D 152 LLRDWVVEVEK--RGAGEILLTSIDRDGTKSGYD---TEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAAS 225 (253)
T ss_dssp EHHHHHHHHHH--TTCSEEEEEETTTTTSCSCCC---HHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHHH--CCCCEEEEEeccCCCCCCCCC---HHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCChHHHHHH
Confidence 45676777662 469999999999887666664 44566666654 79999999999 5999999999999999999
Q ss_pred cccCCC-CHHHHHHHHHH
Q 033598 90 SVFGAP-EPAHVISLMRK 106 (115)
Q Consensus 90 aif~~~-d~~~~~~~l~~ 106 (115)
++++.+ ++.+..+.+++
T Consensus 226 al~~~~~~~~~~~~~l~~ 243 (253)
T 1thf_D 226 VFHFREIDVRELKEYLKK 243 (253)
T ss_dssp HHHTTCSCHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHH
Confidence 999887 88888777654
No 36
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.14 E-value=7e-11 Score=89.31 Aligned_cols=65 Identities=18% Similarity=0.346 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHhhCCCCcEE--EEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 45 PEMMDKVRSLRNRYPSLDIE--VDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 45 ~~~~~ki~~l~~~~~~~~i~--~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+..+++++++++.. ++|+. ++||| |.+++..+.++|||.+++||+||+++||.+.+++|++.+++
T Consensus 193 ~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~ 260 (297)
T 2zbt_A 193 GAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAH 260 (297)
T ss_dssp TCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHH
Confidence 34567788888764 67776 99999 99999999999999999999999999999999999988764
No 37
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.12 E-value=2.9e-10 Score=82.48 Aligned_cols=89 Identities=20% Similarity=0.270 Sum_probs=69.0
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
|+.+.++.+.+ .++|+|+++++.|++.++.+. ++.++++++.. ++|+.++|||+ .+++.++.++|||.+++||
T Consensus 155 ~~~e~~~~~~~--~G~d~i~~~~~~~~g~~~~~~---~~~i~~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 155 DAVKWAKEVEE--LGAGEILLTSIDRDGTGLGYD---VELIRRVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp EHHHHHHHHHH--HTCSEEEEEETTTTTTCSCCC---HHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHHh--CCCCEEEEecccCCCCcCcCC---HHHHHHHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH
Confidence 56677777661 369999999999987777764 45566666654 79999999999 5999999999999999999
Q ss_pred cccCCC-CHHHHHHHHH
Q 033598 90 SVFGAP-EPAHVISLMR 105 (115)
Q Consensus 90 aif~~~-d~~~~~~~l~ 105 (115)
++|+.+ ++.+..+.++
T Consensus 229 al~~~~~~~~~~~~~l~ 245 (253)
T 1h5y_A 229 LFHFRVLSIAQVKRYLK 245 (253)
T ss_dssp HHHTTSSCHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHH
Confidence 999876 4454444443
No 38
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.07 E-value=6.3e-10 Score=83.42 Aligned_cols=85 Identities=24% Similarity=0.350 Sum_probs=64.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|||+.+....|.. +... ..+.++++++. .++|+.+.|||+ ++++.++.++|||.+++||+|++++|+.+.++
T Consensus 146 ~gad~v~~~~~~~Gt~-~~~~--~~~~l~~i~~~-~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~ 221 (264)
T 1xm3_A 146 LGVHAIMPGASPIGSG-QGIL--NPLNLSFIIEQ-AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMAR 221 (264)
T ss_dssp HTCSCBEECSSSTTCC-CCCS--CHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHH
T ss_pred hCCCEEEECCcccCCC-CCCC--CHHHHHHHHhc-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHH
Confidence 4789984332222321 1111 24456666664 489999999996 99999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 033598 103 LMRKSVEDAQ 112 (115)
Q Consensus 103 ~l~~~~~~~~ 112 (115)
+|++.++..+
T Consensus 222 ~l~~~v~~~~ 231 (264)
T 1xm3_A 222 AMKLAVEAGR 231 (264)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887543
No 39
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.05 E-value=6.1e-10 Score=82.06 Aligned_cols=76 Identities=9% Similarity=0.170 Sum_probs=59.2
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHH-cCCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAAS-AGANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~-~Gad~iv 86 (115)
...||-|..+.+- .++|||.+ +| .+.. ...+.+++++...+++|+.+.||||++|++++.+ .|+++++
T Consensus 125 G~~t~~e~~~A~~---~Gad~vk~---FP---a~~~--~G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 125 GISTPSEIMMGYA---LGYRRFKL---FP---AEIS--GGVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp EECSHHHHHHHHT---TTCCEEEE---TT---HHHH--THHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE
T ss_pred eeCCHHHHHHHHH---CCCCEEEE---cc---Cccc--cCHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE
Confidence 3566666655554 78999986 55 1111 1366788888887899999999999999999999 7999999
Q ss_pred EcccccCCC
Q 033598 87 AGSSVFGAP 95 (115)
Q Consensus 87 ~Gsaif~~~ 95 (115)
||+||+++
T Consensus 194 -gSai~~~~ 201 (225)
T 1mxs_A 194 -TTWMLDSS 201 (225)
T ss_dssp -ECTTSCHH
T ss_pred -EchhcCch
Confidence 99999844
No 40
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.04 E-value=3.4e-10 Score=82.68 Aligned_cols=85 Identities=11% Similarity=0.142 Sum_probs=66.8
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh-hhHHHHHHc---CCCEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP-STIAEAASA---GANCIV 86 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~-~ni~~l~~~---Gad~iv 86 (115)
|+++.++.+.+ .++|.|+++++.+++.++.+.. +.++++++. .++|+.++|||+. +++..+.++ |+|.++
T Consensus 150 ~~~e~~~~~~~--~G~~~i~~~~~~~~~~~~g~~~---~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 150 DLWDVLERLDS--EGCSRFVVTDITKDGTLGGPNL---DLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EHHHHHHHHHH--TTCCCEEEEETTTTTTTSCCCH---HHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHh--CCCCEEEEEecCCccccCCCCH---HHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEE
Confidence 56777777762 3699999999999877776644 445556554 4799999999995 999999998 999999
Q ss_pred EcccccCCC-CHHHHH
Q 033598 87 AGSSVFGAP-EPAHVI 101 (115)
Q Consensus 87 ~Gsaif~~~-d~~~~~ 101 (115)
+||++|+.+ ++.+..
T Consensus 224 vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 224 VGKALYARRFTLPQAL 239 (244)
T ss_dssp ECHHHHTTSSCHHHHH
T ss_pred EcHHHHCCCcCHHHHH
Confidence 999999876 444443
No 41
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.99 E-value=9.5e-10 Score=80.40 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=61.4
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc-CCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA-GANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~-Gad~iv 86 (115)
...|+-|..+..- .++|||.+ +|. +.. ...+.++++++..+++|+.+.||||++|++++.++ |++++.
T Consensus 115 G~~t~~e~~~A~~---~Gad~v~~---Fpa---~~~--gG~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 115 GISTVSELMLGMD---YGLKEFKF---FPA---EAN--GGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp EESSHHHHHHHHH---TTCCEEEE---TTT---TTT--THHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE
T ss_pred ecCCHHHHHHHHH---CCCCEEEE---ecC---ccc--cCHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE
Confidence 3567667666665 78999986 662 111 13567888888878999999999999999999999 999998
Q ss_pred EcccccCCCCH
Q 033598 87 AGSSVFGAPEP 97 (115)
Q Consensus 87 ~Gsaif~~~d~ 97 (115)
||+|++++++
T Consensus 184 -gS~i~~~~~~ 193 (214)
T 1wbh_A 184 -GSWLVPADAL 193 (214)
T ss_dssp -EGGGSCHHHH
T ss_pred -eccccChhhh
Confidence 9999986544
No 42
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.95 E-value=2.7e-09 Score=80.63 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=68.9
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
..+|+.+ ++..++ .++|+|.+-+.+ ...|.. .++.+.++++..+ ++|+.+.|||+ ++++..+.++|+|.+
T Consensus 168 ev~t~ee-~~~A~~--~Gad~IGv~~r~----l~~~~~-dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 168 EVHTEQE-ADRALK--AGAKVIGVNARD----LMTLDV-DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp EESSHHH-HHHHHH--HTCSEEEEESBC----TTTCCB-CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred EcCCHHH-HHHHHH--CCCCEEEECCCc----cccccc-CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 3455544 444331 589999764322 223322 2455667776655 79999999998 999999999999999
Q ss_pred EEcccccCCCCHHHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
++||+|++++||.+.+++|.+..
T Consensus 240 lVGsal~~a~dp~~~~~~l~~~~ 262 (272)
T 3qja_A 240 LVGEGLVTSGDPRAAVADLVTAG 262 (272)
T ss_dssp EECHHHHTCSCHHHHHHHHHTTT
T ss_pred EEcHHHhCCCCHHHHHHHHHhhh
Confidence 99999999999999999988654
No 43
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.94 E-value=6.4e-09 Score=76.53 Aligned_cols=74 Identities=18% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc-CCCEEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA-GANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~-Gad~iv~ 87 (115)
..|+-|..+..- .++|||.+ +|. +.. ..++.++++++..+++|+.+.||||++|++++.++ |++++.
T Consensus 117 v~t~~e~~~A~~---~Gad~vk~---Fpa---~~~--gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~- 184 (224)
T 1vhc_A 117 VNNPMAIEIALE---MGISAVKF---FPA---EAS--GGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG- 184 (224)
T ss_dssp ECSHHHHHHHHH---TTCCEEEE---TTT---TTT--THHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-
T ss_pred cCCHHHHHHHHH---CCCCEEEE---eeC---ccc--cCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-
Confidence 456666666655 78999986 562 111 13667888888878899999999999999999999 999998
Q ss_pred cccccCC
Q 033598 88 GSSVFGA 94 (115)
Q Consensus 88 Gsaif~~ 94 (115)
||+|+++
T Consensus 185 gS~i~~~ 191 (224)
T 1vhc_A 185 GSWFVEK 191 (224)
T ss_dssp ECGGGCH
T ss_pred EchhcCc
Confidence 9999974
No 44
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=98.93 E-value=6.7e-11 Score=87.23 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=55.1
Q ss_pred CEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCC-CcEEEEcCCChh--hHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 27 EMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPS-LDIEVDGGLGPS--TIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 27 D~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~-~~i~~dGGI~~~--ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
+.+.-|+.++|+.|.-......+.++++|+..++ +++ +++||+++ +. +..++|+|++|+||+||+++||.+++++
T Consensus 140 ~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~ 217 (228)
T 3m47_A 140 DEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAG 217 (228)
T ss_dssp HHHHHHHHHTTCCEEECCSSCHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEECCCChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHH
Confidence 3444456667776654432224556677766544 766 99999987 77 8889999999999999999999999999
Q ss_pred HHHHHHHHh
Q 033598 104 MRKSVEDAQ 112 (115)
Q Consensus 104 l~~~~~~~~ 112 (115)
+++.++++.
T Consensus 218 ~~~~~~~~~ 226 (228)
T 3m47_A 218 AIESIKDLL 226 (228)
T ss_dssp HHHHC----
T ss_pred HHHHHHHHh
Confidence 999887653
No 45
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.93 E-value=2.5e-09 Score=81.85 Aligned_cols=64 Identities=22% Similarity=0.363 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhCCCCcEE--EEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 47 MMDKVRSLRNRYPSLDIE--VDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~--~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
.++.++++++.. ++|+. ++||| +++++..+.++|||.+++||+||+++||.+.+++|++.++++
T Consensus 195 ~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 195 PIDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp CHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 456677777664 46665 99999 999999999999999999999999999999999999888754
No 46
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=1.8e-09 Score=78.92 Aligned_cols=82 Identities=22% Similarity=0.315 Sum_probs=54.2
Q ss_pred CCCEEEEEeeeC-CCCC---cccchhHHHH-HHHHHhhCCCCcEEEEcCCCh-hhHHHHHHcCCCEEEEcccccCCCCHH
Q 033598 25 PVEMVLVMTVEP-GFGG---QKFMPEMMDK-VRSLRNRYPSLDIEVDGGLGP-STIAEAASAGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 25 ~vD~vlvm~v~p-G~~g---q~~~~~~~~k-i~~l~~~~~~~~i~~dGGI~~-~ni~~l~~~Gad~iv~Gsaif~~~d~~ 98 (115)
..++|.+-++.. | +| +.+.++.++. ++.+++...++|+.+.|||+. +.+..+.+.|+|++++||++++++|+.
T Consensus 131 ~~~~i~~~~~~~iG-tG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~ 209 (219)
T 2h6r_A 131 SPDCIAVEPPELIG-TGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVE 209 (219)
T ss_dssp CCSEEEECCCC---------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHH
T ss_pred CCCEEEEEeccccc-cCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHH
Confidence 356666555544 5 56 6665553333 334444444799999999995 777779999999999999999999999
Q ss_pred HHHHHHHHH
Q 033598 99 HVISLMRKS 107 (115)
Q Consensus 99 ~~~~~l~~~ 107 (115)
+.+++|++.
T Consensus 210 ~~~~~l~~~ 218 (219)
T 2h6r_A 210 EAIRELIKF 218 (219)
T ss_dssp HHHHHHCC-
T ss_pred HHHHHHHHh
Confidence 998887643
No 47
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.84 E-value=9e-10 Score=85.32 Aligned_cols=81 Identities=15% Similarity=0.270 Sum_probs=64.8
Q ss_pred EEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcE--EEEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHH
Q 033598 29 VLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDI--EVDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMR 105 (115)
Q Consensus 29 vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i--~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~ 105 (115)
+.+.+++|.++........++.++++++.. .+|+ .+.||| |++++.++.++|+|.+.+||+||+++||.+.+++|+
T Consensus 210 Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~ 288 (330)
T 2yzr_A 210 LENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIV 288 (330)
T ss_dssp CTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHH
T ss_pred cccccccCCCcccCCCcchHHHHHHHHHhC-CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHH
Confidence 445566666555433344557788887753 5777 699999 699999999999999999999999999999999999
Q ss_pred HHHHH
Q 033598 106 KSVED 110 (115)
Q Consensus 106 ~~~~~ 110 (115)
+.++.
T Consensus 289 ~ai~~ 293 (330)
T 2yzr_A 289 EATYN 293 (330)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
No 48
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.81 E-value=3.6e-08 Score=72.70 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=68.1
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCc-ccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQ-KFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq-~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
+.+|..+.....- .++|+|.+ ..-||+.. +.....++.++++++. ++|+.+.||| +++++..+.++|||.+
T Consensus 135 ~v~t~eea~~a~~---~Gad~Ig~--~~~g~t~~~~~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (232)
T 3igs_A 135 DCSSVDDGLACQR---LGADIIGT--TMSGYTTPDTPEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAV 207 (232)
T ss_dssp ECCSHHHHHHHHH---TTCSEEEC--TTTTSSSSSCCSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred eCCCHHHHHHHHh---CCCCEEEE--cCccCCCCCCCCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 4455444444333 68999953 22344332 1123356778888775 7999999999 6999999999999999
Q ss_pred EEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
++||+|++ |....++|.+.+++.
T Consensus 208 ~VGsal~~---p~~~~~~~~~~i~~~ 230 (232)
T 3igs_A 208 TVGSAITR---LEHICGWYNDALKKA 230 (232)
T ss_dssp EECHHHHC---HHHHHHHHHHHHHHH
T ss_pred EEehHhcC---HHHHHHHHHHHHHHh
Confidence 99999995 778888888877654
No 49
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.80 E-value=2.2e-08 Score=75.11 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=61.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh-------hHHHHHHcCCCEEEEcccccCCCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS-------TIAEAASAGANCIVAGSSVFGAPE 96 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~-------ni~~l~~~Gad~iv~Gsaif~~~d 96 (115)
.++|||-+- .|+ ..+.++++++..+.+|+.+.|||+.+ ++..+.++||+++++|++||+++|
T Consensus 171 ~GAD~vkt~--~~~---------~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~d 239 (263)
T 1w8s_A 171 LGADAMKIK--YTG---------DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRD 239 (263)
T ss_dssp HTCSEEEEE--CCS---------SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTT
T ss_pred cCCCEEEEc--CCC---------CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcC
Confidence 479998754 231 34567777766544599999999976 888888999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 033598 97 PAHVISLMRKSVED 110 (115)
Q Consensus 97 ~~~~~~~l~~~~~~ 110 (115)
|.+++++|++.+++
T Consensus 240 p~~~~~~l~~~v~~ 253 (263)
T 1w8s_A 240 ALKFARALAELVYG 253 (263)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998865
No 50
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.80 E-value=2.1e-08 Score=74.94 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=67.2
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc--cc-hhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCC
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK--FM-PEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGA 82 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~--~~-~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Ga 82 (115)
+.|+|+.+.++.+...+. +++.++ ...|.+|.. +. +...+.++++|+.. ++|+.+.|||+ ++++.. ...||
T Consensus 154 ~~p~t~~~rl~~ia~~a~--gfiy~v-s~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gA 228 (262)
T 2ekc_A 154 GAPTSTRKRIKLICEAAD--EMTYFV-SVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFA 228 (262)
T ss_dssp ECTTCCHHHHHHHHHHCS--SCEEEE-SSCC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTS
T ss_pred eCCCCCHHHHHHHHHhCC--CCEEEE-ecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCC
Confidence 578888888888775434 344443 345555543 23 44567888888875 79999999998 999999 57799
Q ss_pred CEEEEcccccCC--CCHHHHHHHHHHHHHH
Q 033598 83 NCIVAGSSVFGA--PEPAHVISLMRKSVED 110 (115)
Q Consensus 83 d~iv~Gsaif~~--~d~~~~~~~l~~~~~~ 110 (115)
|++|+||+|.+. ++..+.++++-+.+++
T Consensus 229 DgvIVGSai~~~~~~~~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 229 DGVVVGSALVKLAGQKKIEDLGNLVKELKE 258 (262)
T ss_dssp SEEEECHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEECHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 999999999875 4445555555555544
No 51
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=98.80 E-value=1e-08 Score=75.18 Aligned_cols=62 Identities=19% Similarity=0.434 Sum_probs=54.2
Q ss_pred HHHHHHhhCCCCcEEEEcCCChh--hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHh
Q 033598 50 KVRSLRNRYPSLDIEVDGGLGPS--TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 50 ki~~l~~~~~~~~i~~dGGI~~~--ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~ 112 (115)
.++++|+..++ .+.+++||+++ +..+..++|+|.+|+|++||+++||.++++++++.++++.
T Consensus 141 e~~~ir~~~~~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 141 MISRVKGDFPD-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp HHHHHHHHCTT-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45566666667 68899999999 9999999999999999999999999999999999887643
No 52
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.75 E-value=1.6e-08 Score=76.40 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=55.4
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHH-HHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR-SLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~-~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv 86 (115)
..+|.-+..+.+- .++|+|++.+. .++.+.++. .++..+|+++|++.||||++|++.+.++|+|.+.
T Consensus 188 ev~tlee~~~A~~---aGaD~I~ld~~---------~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~ 255 (273)
T 2b7n_A 188 ECESFEEAKNAMN---AGADIVMCDNL---------SVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAIS 255 (273)
T ss_dssp EESSHHHHHHHHH---HTCSEEEEETC---------CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEE
T ss_pred EcCCHHHHHHHHH---cCCCEEEECCC---------CHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEE
Confidence 4455544333333 58999997652 234444433 3444467899999999999999999999999999
Q ss_pred EcccccCCC
Q 033598 87 AGSSVFGAP 95 (115)
Q Consensus 87 ~Gsaif~~~ 95 (115)
+||.+++++
T Consensus 256 vGs~i~~a~ 264 (273)
T 2b7n_A 256 VGALIHQAT 264 (273)
T ss_dssp CTHHHHTCC
T ss_pred EcHHhcCCC
Confidence 999998754
No 53
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.73 E-value=6.6e-08 Score=73.89 Aligned_cols=84 Identities=19% Similarity=0.137 Sum_probs=63.5
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC-CCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGF-GGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~-~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
+..|+.+....+. .++|+|++.+..+|. .|+ +....++.+.++++.. ++|+.++||| +.+++..+...|||.+
T Consensus 124 ~v~t~~~a~~~~~---~GaD~i~v~g~~~GG~~G~-~~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV 198 (328)
T 2gjl_A 124 KCTAVRHALKAER---LGVDAVSIDGFECAGHPGE-DDIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAI 198 (328)
T ss_dssp EESSHHHHHHHHH---TTCSEEEEECTTCSBCCCS-SCCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred eCCCHHHHHHHHH---cCCCEEEEECCCCCcCCCC-ccccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 3455555555555 789999987766542 233 2335667788887654 7999999999 6899999999999999
Q ss_pred EEcccccCCCC
Q 033598 86 VAGSSVFGAPE 96 (115)
Q Consensus 86 v~Gsaif~~~d 96 (115)
.+||+++..++
T Consensus 199 ~vGs~~~~~~e 209 (328)
T 2gjl_A 199 NMGTRFLATRE 209 (328)
T ss_dssp EESHHHHTSSS
T ss_pred EECHHHHcCcc
Confidence 99999998665
No 54
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.72 E-value=1.6e-08 Score=76.84 Aligned_cols=64 Identities=19% Similarity=0.363 Sum_probs=55.0
Q ss_pred hHHHHHHHHHhhCCCCcEE--EEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 46 EMMDKVRSLRNRYPSLDIE--VDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~--~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
..++.++++++. .++|+. +.||| |.+++..+.++|||.+++||++|+++||...+++|++.+.+
T Consensus 194 ~~~~~i~~i~~~-~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~ 260 (305)
T 2nv1_A 194 APYELLLQIKKD-GKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTH 260 (305)
T ss_dssp CCHHHHHHHHHH-TSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHh-cCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHH
Confidence 345667777765 368888 99999 99999999999999999999999999999999999887764
No 55
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=98.71 E-value=1.8e-08 Score=76.80 Aligned_cols=75 Identities=17% Similarity=0.314 Sum_probs=55.3
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHH-HHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDK-VRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~k-i~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
.+| ++.+++.++ .++|+|++-.. .++.+.+ ++.++..++++++++.||||++|++++.++|+|++++
T Consensus 200 V~t-leea~eA~~--aGaD~I~LDn~---------~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~Isv 267 (285)
T 1o4u_A 200 VEN-LEDALRAVE--AGADIVMLDNL---------SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISS 267 (285)
T ss_dssp ESS-HHHHHHHHH--TTCSEEEEESC---------CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEE
T ss_pred eCC-HHHHHHHHH--cCCCEEEECCC---------CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 345 444444442 58999987663 3344433 3444444567999999999999999999999999999
Q ss_pred cccccCCC
Q 033598 88 GSSVFGAP 95 (115)
Q Consensus 88 Gsaif~~~ 95 (115)
||.+++++
T Consensus 268 Gslt~sa~ 275 (285)
T 1o4u_A 268 SRLTLQEV 275 (285)
T ss_dssp GGGTSSCC
T ss_pred eHHHcCCC
Confidence 99998765
No 56
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.71 E-value=9.6e-09 Score=78.09 Aligned_cols=65 Identities=15% Similarity=0.328 Sum_probs=56.1
Q ss_pred hHHHHHHHHHhhCCCCcEEE--EcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 46 EMMDKVRSLRNRYPSLDIEV--DGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~~--dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
..++.|+++++. +++|+.+ .||| |++++.++.++|+|.+.+||+||+++||...+++|++.+..+
T Consensus 185 ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 185 VPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTHF 252 (291)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHhc
Confidence 346777888776 4788865 5999 899999999999999999999999999999999999887643
No 57
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.69 E-value=1.3e-07 Score=71.41 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=69.5
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc--cchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK--FMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG 81 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~--~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G 81 (115)
..+.|.|+.+.++.+.+. .-+||-+.+ ..|++|.. +.+...+.++++|+.. +.|+.+.+|| +++++......|
T Consensus 155 ~lvap~t~~eri~~i~~~--~~gfiY~vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~g 230 (271)
T 3nav_A 155 FIAPPTASDETLRAVAQL--GKGYTYLLS-RAGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAG 230 (271)
T ss_dssp EEECTTCCHHHHHHHHHH--CCSCEEECC-CC--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTT
T ss_pred EEECCCCCHHHHHHHHHH--CCCeEEEEe-ccCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcC
Confidence 356788999988888732 346655433 55666653 4455667788888875 7999999999 599999888999
Q ss_pred CCEEEEcccccC-----CCCHHHHHHHHHHHHH
Q 033598 82 ANCIVAGSSVFG-----APEPAHVISLMRKSVE 109 (115)
Q Consensus 82 ad~iv~Gsaif~-----~~d~~~~~~~l~~~~~ 109 (115)
||++|+||+|.+ .+++.+..+.+++..+
T Consensus 231 ADgvIVGSAiv~~i~~~~~~~~~~~~~~~~~~~ 263 (271)
T 3nav_A 231 AAGAISGSAVVKIIETHLDNPAKQLTELANFTQ 263 (271)
T ss_dssp CSEEEESHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCEEEECHHHHHHHHhhccchHHHHHHHHHHHH
Confidence 999999999885 2245555555555444
No 58
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.69 E-value=8.8e-08 Score=70.54 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=64.4
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCc-ccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQ-KFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq-~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
+.+|..+.....- .++|+|.+ ..-||++. ......++.++++++. ++|+.+.||| |++++..+.++|||.+
T Consensus 135 ~v~t~eea~~a~~---~Gad~Ig~--~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 135 DCSTVNEGISCHQ---KGIEFIGT--TLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp ECSSHHHHHHHHH---TTCSEEEC--TTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred ecCCHHHHHHHHh---CCCCEEEe--cCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 4455544444444 68999953 22355432 1123356778888765 7999999999 6999999999999999
Q ss_pred EEcccccCCCCHHHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
++||+|++ |....+++.+.+
T Consensus 208 ~VGsai~~---p~~~~~~f~~~~ 227 (229)
T 3q58_A 208 TVGSAITR---IEHICQWFSHAV 227 (229)
T ss_dssp EECHHHHC---HHHHHHHHHHHH
T ss_pred EEchHhcC---hHHHHHHHHHHH
Confidence 99999996 566666666554
No 59
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.68 E-value=3e-08 Score=75.85 Aligned_cols=77 Identities=22% Similarity=0.387 Sum_probs=55.8
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHH-HHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR-SLRNRYPSLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~-~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
+..+|.-+..+.+- .++|+|++.+ |.++.+.++. .++..+++++|++.||||++|++.+.++|+|.+
T Consensus 202 vev~tlee~~~A~~---aGaD~I~ld~---------~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i 269 (299)
T 2jbm_A 202 VECSSLQEAVQAAE---AGADLVLLDN---------FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVI 269 (299)
T ss_dssp EEESSHHHHHHHHH---TTCSEEEEES---------CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEE
T ss_pred EecCCHHHHHHHHH---cCCCEEEECC---------CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEE
Confidence 34455544434433 6899999865 2234444433 334446789999999999999999999999999
Q ss_pred EEcccccCCC
Q 033598 86 VAGSSVFGAP 95 (115)
Q Consensus 86 v~Gsaif~~~ 95 (115)
.+||.+++++
T Consensus 270 ~vGs~i~~a~ 279 (299)
T 2jbm_A 270 SMGMLTQAAP 279 (299)
T ss_dssp ECTHHHHSCC
T ss_pred EEChhhcCCC
Confidence 9999988764
No 60
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.68 E-value=1.4e-07 Score=71.38 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=65.5
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
..+|..|. +..++ .++|+|++-..+. .. |.. .++...++.+..| ++++++.||| |++++..+.++|+|.+
T Consensus 175 evh~~eEl-~~A~~--~ga~iIGinnr~l--~t--~~~-dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 175 EVHDEAEM-ERALK--LSSRLLGVNNRNL--RS--FEV-NLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp EECSHHHH-HHHTT--SCCSEEEEECBCT--TT--CCB-CTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEE
T ss_pred EeCCHHHH-HHHHh--cCCCEEEECCCCC--cc--CCC-ChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 34454444 44341 5899997643332 22 222 2344555555544 6899999999 9999999999999999
Q ss_pred EEcccccCCCCHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRK 106 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~ 106 (115)
++|++|++++||.+++++|..
T Consensus 247 LVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 247 LIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp EECHHHHTSSCHHHHHHHHHH
T ss_pred EEcHHHcCCcCHHHHHHHHHh
Confidence 999999999999999888764
No 61
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=98.66 E-value=6.8e-08 Score=73.48 Aligned_cols=73 Identities=21% Similarity=0.322 Sum_probs=54.5
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEccccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif 92 (115)
++.+++.++ .++|+|++-...| ....+-++.++..++++++++.||||++|++++.++|+|++++|+.+.
T Consensus 204 ~eea~eal~--aGaD~I~LDn~~~--------~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 204 LEQLDAVLP--EKPELILLDNFAV--------WQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp HHHHHHHGG--GCCSEEEEETCCH--------HHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGGGTS
T ss_pred HHHHHHHHH--cCCCEEEECCCCH--------HHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECHHHc
Confidence 455555552 4899998766433 222233555565566899999999999999999999999999999887
Q ss_pred CCC
Q 033598 93 GAP 95 (115)
Q Consensus 93 ~~~ 95 (115)
+++
T Consensus 274 ~a~ 276 (284)
T 1qpo_A 274 SVR 276 (284)
T ss_dssp SBC
T ss_pred CCC
Confidence 655
No 62
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.61 E-value=9.3e-08 Score=72.79 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=53.6
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
+.|+ ..+|..+..+... .++|||++-.+.| +.+. ++.+. ..++|+++.||||++|++++.++
T Consensus 198 ~IgV--ev~t~eea~eA~~---aGaD~I~ld~~~~---------~~~k---~av~~v~~~ipi~AsGGIt~eni~~~a~t 260 (286)
T 1x1o_A 198 KVEV--EVRSLEELEEALE---AGADLILLDNFPL---------EALR---EAVRRVGGRVPLEASGNMTLERAKAAAEA 260 (286)
T ss_dssp CEEE--EESSHHHHHHHHH---HTCSEEEEESCCH---------HHHH---HHHHHHTTSSCEEEESSCCHHHHHHHHHH
T ss_pred EEEE--EeCCHHHHHHHHH---cCCCEEEECCCCH---------HHHH---HHHHHhCCCCeEEEEcCCCHHHHHHHHHc
Confidence 3455 3355334444433 5899998766543 2222 22222 23699999999999999999999
Q ss_pred CCCEEEEcccccCCC
Q 033598 81 GANCIVAGSSVFGAP 95 (115)
Q Consensus 81 Gad~iv~Gsaif~~~ 95 (115)
|+|++++||.+++++
T Consensus 261 GvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 261 GVDYVSVGALTHSAK 275 (286)
T ss_dssp TCSEEECTHHHHSCC
T ss_pred CCCEEEEcHHHcCCC
Confidence 999999999888754
No 63
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.61 E-value=8.5e-08 Score=73.59 Aligned_cols=59 Identities=17% Similarity=0.314 Sum_probs=49.4
Q ss_pred HHHHhhCCCCcEEEEcCCChh-----------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 52 RSLRNRYPSLDIEVDGGLGPS-----------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 52 ~~l~~~~~~~~i~~dGGI~~~-----------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+.+|+..++-.+.+.+||+++ |+.++.++|||++|+||+||+++||.++++++++.++.
T Consensus 183 ~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 183 KKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp HHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-
T ss_pred HHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHh
Confidence 344554444448899999987 89999999999999999999999999999999987764
No 64
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.60 E-value=1.3e-07 Score=70.18 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=61.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhh-------HHHHHHcCCCEEEEcccccCCCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPST-------IAEAASAGANCIVAGSSVFGAPE 96 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~n-------i~~l~~~Gad~iv~Gsaif~~~d 96 (115)
.++|||.+- |+ ..++.++++++.. ++|+.+.|||+.+| +..+.++|++.+.+||+|++++|
T Consensus 178 ~Gad~i~~~---~~--------~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~ 245 (273)
T 2qjg_A 178 LGADIVKTS---YT--------GDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDD 245 (273)
T ss_dssp TTCSEEEEC---CC--------SSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSS
T ss_pred cCCCEEEEC---CC--------CCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCC
Confidence 579998753 31 2356677777654 69999999999776 88888999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 033598 97 PAHVISLMRKSVED 110 (115)
Q Consensus 97 ~~~~~~~l~~~~~~ 110 (115)
|.+.++++++.+++
T Consensus 246 ~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 246 VVGITRAVCKIVHE 259 (273)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988865
No 65
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.59 E-value=6.8e-08 Score=72.14 Aligned_cols=76 Identities=11% Similarity=0.107 Sum_probs=56.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC----CCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP----SLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~----~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~ 98 (115)
.+.|+|.+-..+.. .-....+. ..++++..+ ++++.+.|||+ ++++..+.+ |+|.+++||+|++++||.
T Consensus 173 ~gad~IGvn~~~l~--~~~~dl~~---~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~ 246 (254)
T 1vc4_A 173 AGAEVLGINNRDLA--TLHINLET---APRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLE 246 (254)
T ss_dssp HTCSEEEEESBCTT--TCCBCTTH---HHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCHH
T ss_pred cCCCEEEEccccCc--CCCCCHHH---HHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCHH
Confidence 36799986555532 21222233 334433322 68899999998 999999999 999999999999999999
Q ss_pred HHHHHHH
Q 033598 99 HVISLMR 105 (115)
Q Consensus 99 ~~~~~l~ 105 (115)
+++++|.
T Consensus 247 ~~~~~l~ 253 (254)
T 1vc4_A 247 AALRELV 253 (254)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 66
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.58 E-value=1.6e-07 Score=70.77 Aligned_cols=97 Identities=26% Similarity=0.355 Sum_probs=64.4
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc--cchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCC
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK--FMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGA 82 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~--~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Ga 82 (115)
.+.|.|+.+.++.+...+.+.+|+. ...|++|.. +.....+.++++++.. ++|+.+-|||+ ++++.++ .||
T Consensus 150 liap~s~~eri~~ia~~~~gfiy~v---s~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~--~~A 223 (271)
T 1ujp_A 150 LLAPTSTDARIATVVRHATGFVYAV---SVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA--AVA 223 (271)
T ss_dssp EECTTCCHHHHHHHHTTCCSCEEEE---CC------------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH--TTS
T ss_pred EeCCCCCHHHHHHHHHhCCCCEEEE---ecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh--cCC
Confidence 3678899998888885545555443 335666643 2344456788888764 79999999998 9999997 899
Q ss_pred CEEEEcccccCCC----CHHHHHHHHHHHH
Q 033598 83 NCIVAGSSVFGAP----EPAHVISLMRKSV 108 (115)
Q Consensus 83 d~iv~Gsaif~~~----d~~~~~~~l~~~~ 108 (115)
|++|+||+|.+.- ...+.++.+++.+
T Consensus 224 DgVIVGSAi~~~~~~~~~~~~fv~~l~~~~ 253 (271)
T 1ujp_A 224 DGVVVGSALVRALEEGRSLAPLLQEIRQGL 253 (271)
T ss_dssp SEEEECHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CEEEEChHHhcccchHHHHHHHHHHHHHHH
Confidence 9999999998632 3455555555444
No 67
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.57 E-value=2.2e-07 Score=68.81 Aligned_cols=74 Identities=16% Similarity=0.152 Sum_probs=60.1
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.||-|....+- .++|+|-+ +|.. .. ...+.|+.++.-.+++|+.+.|||+++|++++.++|+..+++||
T Consensus 135 ~TptEi~~A~~---~Gad~vK~---FPa~---~~--gG~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs 203 (232)
T 4e38_A 135 NNPSTVEAALE---MGLTTLKF---FPAE---AS--GGISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGT 203 (232)
T ss_dssp CSHHHHHHHHH---TTCCEEEE---CSTT---TT--THHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEEC
T ss_pred CCHHHHHHHHH---cCCCEEEE---CcCc---cc--cCHHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECc
Confidence 47777777766 78999975 6641 11 24577888888778999999999999999999999999999999
Q ss_pred cccCC
Q 033598 90 SVFGA 94 (115)
Q Consensus 90 aif~~ 94 (115)
.++..
T Consensus 204 ~l~~~ 208 (232)
T 4e38_A 204 WMVDK 208 (232)
T ss_dssp GGGCH
T ss_pred hhcCh
Confidence 99863
No 68
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.55 E-value=5.7e-07 Score=67.73 Aligned_cols=82 Identities=18% Similarity=0.268 Sum_probs=64.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
-+.|+|+-++..-| +|+... ..+.|+++++. .++|+.++|||. ++.+....+.|+|.+++||+|++++||...++
T Consensus 155 ~G~~aVmPlg~pIG-sG~Gi~--~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~ 230 (265)
T 1wv2_A 155 IGCIAVMPLAGLIG-SGLGIC--NPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAE 230 (265)
T ss_dssp SCCSEEEECSSSTT-CCCCCS--CHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHH
T ss_pred hCCCEEEeCCccCC-CCCCcC--CHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHH
Confidence 57888843333224 454442 24556777774 589999999996 69999999999999999999999999999999
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
++.+.++
T Consensus 231 af~~Av~ 237 (265)
T 1wv2_A 231 AMKHAIV 237 (265)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998775
No 69
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.54 E-value=5.3e-07 Score=65.84 Aligned_cols=88 Identities=20% Similarity=0.175 Sum_probs=64.2
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsai 91 (115)
.+.++.+.+ .+++.+++.++... |....+ .++.++++++.. ++|+.+.|||+ ++++..+.++|+|.+++||++
T Consensus 155 ~e~~~~~~~--~G~~~i~~~~~~~~--g~~~g~-~~~~i~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal 228 (252)
T 1ka9_F 155 VEWAVKGVE--LGAGEILLTSMDRD--GTKEGY-DLRLTRMVAEAV-GVPVIASGGAGRMEHFLEAFQAGAEAALAASVF 228 (252)
T ss_dssp HHHHHHHHH--HTCCEEEEEETTTT--TTCSCC-CHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHH--cCCCEEEEecccCC--CCcCCC-CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHH
Confidence 555555551 36898887654432 222222 366777777764 79999999999 599999999999999999999
Q ss_pred cCCC-CHHHHHHHHHH
Q 033598 92 FGAP-EPAHVISLMRK 106 (115)
Q Consensus 92 f~~~-d~~~~~~~l~~ 106 (115)
++.+ ++.+..+.+++
T Consensus 229 ~~~~~~~~~~~~~l~~ 244 (252)
T 1ka9_F 229 HFGEIPIPKLKRYLAE 244 (252)
T ss_dssp HTTSSCHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHH
Confidence 9887 78777666543
No 70
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.52 E-value=6.7e-08 Score=73.73 Aligned_cols=79 Identities=14% Similarity=0.222 Sum_probs=43.9
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHH-HHhh---CCCCcEEEEcCCChhhHHHHHHc
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRS-LRNR---YPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~-l~~~---~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
+.+..+|.-+..+.+- .++|+|++-+.. ++.+.++.+ ++.. .++++|++.||||++|++.+.++
T Consensus 202 i~vev~tlee~~~A~~---aGaD~I~ld~~~---------~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~ 269 (294)
T 3c2e_A 202 IEVECLSEDEATEAIE---AGADVIMLDNFK---------GDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCD 269 (294)
T ss_dssp EEEECSSSHHHHHHHH---HTCSEEECCC------------------------------CCEEEEECCCCC------CCC
T ss_pred EEEecCCHHHHHHHHH---cCCCEEEECCCC---------HHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHc
Confidence 3446677755444443 589999874422 223222222 2211 24699999999999999999999
Q ss_pred CCCEEEEcccccCCC
Q 033598 81 GANCIVAGSSVFGAP 95 (115)
Q Consensus 81 Gad~iv~Gsaif~~~ 95 (115)
|+|.+.+||.+++++
T Consensus 270 GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 270 DIDIYSTSSIHQGTP 284 (294)
T ss_dssp SCSEEECGGGTSSCC
T ss_pred CCCEEEEechhcCCC
Confidence 999999999998754
No 71
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=98.51 E-value=1.3e-07 Score=71.11 Aligned_cols=49 Identities=24% Similarity=0.373 Sum_probs=44.4
Q ss_pred EEEEcCCChh-----------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 63 IEVDGGLGPS-----------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 63 i~~dGGI~~~-----------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
+.+..||++. |..++.++|||++|+||+||+++||.++++++++.++.+
T Consensus 180 ~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~~ 239 (259)
T 3tfx_A 180 LYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNAE 239 (259)
T ss_dssp EEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTCT
T ss_pred EEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHH
Confidence 6789999987 588999999999999999999999999999999887643
No 72
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.49 E-value=5.3e-07 Score=68.93 Aligned_cols=51 Identities=20% Similarity=0.455 Sum_probs=47.1
Q ss_pred CCc-EEEEcCCCh----hhHHHHHHcCCCEEEEcccccCC----CCHHHHH--------HHHHHHHHH
Q 033598 60 SLD-IEVDGGLGP----STIAEAASAGANCIVAGSSVFGA----PEPAHVI--------SLMRKSVED 110 (115)
Q Consensus 60 ~~~-i~~dGGI~~----~ni~~l~~~Gad~iv~Gsaif~~----~d~~~~~--------~~l~~~~~~ 110 (115)
..| +.+.||++. ++++.+.++|++++++|++||++ +||.+.+ ++|++++++
T Consensus 221 ~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~ 288 (304)
T 1to3_A 221 NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDE 288 (304)
T ss_dssp CSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhc
Confidence 689 999999998 56999999999999999999999 9999999 999998876
No 73
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=98.48 E-value=1.4e-07 Score=68.83 Aligned_cols=57 Identities=18% Similarity=0.256 Sum_probs=45.0
Q ss_pred HHHHHHHhhCCCCcEEEEcCCChhh----------HHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 49 DKVRSLRNRYPSLDIEVDGGLGPST----------IAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~dGGI~~~n----------i~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
+.++++|+..+. + .+++||++++ ..+ .++|+|++|+|++||+++||.++++++++.+
T Consensus 146 ~~~~~ir~~~~~-~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 146 PWAKALREKIKG-K-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp HHHHHHTTTCCS-C-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC--
T ss_pred HHHHHHHHHCCC-C-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHHHh
Confidence 566777776544 5 9999999987 578 8999999999999999999999999998654
No 74
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=98.48 E-value=2.7e-07 Score=67.72 Aligned_cols=62 Identities=26% Similarity=0.492 Sum_probs=53.5
Q ss_pred HHHHHHHhhCCCCcEEEEcCCChh--hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHH
Q 033598 49 DKVRSLRNRYPSLDIEVDGGLGPS--TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~dGGI~~~--ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
+.++.+|+..++ .+.+.+||.++ +..+..++|+|.+|+|+.|++++||.++++++++.+++.
T Consensus 147 ~e~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~~ 210 (222)
T 4dbe_A 147 DHITQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDK 210 (222)
T ss_dssp HHHHHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHHH
Confidence 446666766666 57899999998 788888999999999999999999999999999988764
No 75
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.45 E-value=7.9e-07 Score=69.03 Aligned_cols=82 Identities=18% Similarity=0.272 Sum_probs=59.0
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc--cc---------hhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHH
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK--FM---------PEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEA 77 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~--~~---------~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l 77 (115)
.|+.+....+- .++|+|.+- .|+++|+. +. ...++.++++++.. ++|+.++||| +.+++..+
T Consensus 153 ~t~~~a~~a~~---~GaD~i~v~--g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~~~~~~ 226 (369)
T 3bw2_A 153 TTPEEARAVEA---AGADAVIAQ--GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGGQIAAV 226 (369)
T ss_dssp SSHHHHHHHHH---TTCSEEEEE--CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHH---cCCCEEEEe--CCCcCCcCCCcccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHHHHHHH
Confidence 34444444444 689999873 33333321 11 12367788887664 7999999999 99999999
Q ss_pred HHcCCCEEEEcccccCCCCH
Q 033598 78 ASAGANCIVAGSSVFGAPEP 97 (115)
Q Consensus 78 ~~~Gad~iv~Gsaif~~~d~ 97 (115)
++.|||.+.+||+++..+++
T Consensus 227 l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 227 LAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp HHTTCSEEEESHHHHTSTTC
T ss_pred HHcCCCEEEEChHHhCCccc
Confidence 99999999999999987665
No 76
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.45 E-value=1.3e-06 Score=65.66 Aligned_cols=96 Identities=16% Similarity=0.274 Sum_probs=65.4
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeee------C------------CCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-Ch
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVE------P------------GFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GP 71 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~------p------------G~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~ 71 (115)
+..+..+.+. + .++|+|.+-... + |++|....+..++.++++++.. ++|+.+.||| +.
T Consensus 177 ~~~~~a~~l~-~-~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~ 253 (311)
T 1ep3_A 177 DIVPIAKAVE-A-AGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANA 253 (311)
T ss_dssp CSHHHHHHHH-H-TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSH
T ss_pred HHHHHHHHHH-H-cCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEEECCcCCH
Confidence 3344444443 2 579999874321 1 2344443344567788888764 7999999999 79
Q ss_pred hhHHHHHHcCCCEEEEcccccCCCCHH-HHHHHHHHHHH
Q 033598 72 STIAEAASAGANCIVAGSSVFGAPEPA-HVISLMRKSVE 109 (115)
Q Consensus 72 ~ni~~l~~~Gad~iv~Gsaif~~~d~~-~~~~~l~~~~~ 109 (115)
+++.++.++|||.+.+|++++..++.- +..+.++..+.
T Consensus 254 ~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l~~~~~ 292 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTANFADPFVCPKIIDKLPELMD 292 (311)
T ss_dssp HHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHHHHHHHH
Confidence 999999999999999999988766653 33344444443
No 77
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.39 E-value=1.5e-06 Score=65.55 Aligned_cols=83 Identities=23% Similarity=0.338 Sum_probs=63.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCC-CcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPS-LDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~-~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
-+.|.|+-++..-| +|+.... .+.++++++..++ +|+.++|||. ++.+....+.|+|.+.+||+|++++||...+
T Consensus 144 ~G~~aVmPlg~pIG-sG~Gi~~--~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma 220 (268)
T 2htm_A 144 LGTATVMPLAAPIG-SGWGVRT--RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMA 220 (268)
T ss_dssp HTCSCBEEBSSSTT-TCCCSTT--HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHH
T ss_pred cCCCEEEecCccCc-CCcccCC--HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHH
Confidence 36777733322234 4554422 3347777774457 9999999996 5999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 033598 102 SLMRKSVE 109 (115)
Q Consensus 102 ~~l~~~~~ 109 (115)
+++++.++
T Consensus 221 ~af~~Av~ 228 (268)
T 2htm_A 221 EAFRLAVE 228 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 78
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.37 E-value=1.6e-06 Score=64.98 Aligned_cols=98 Identities=19% Similarity=0.252 Sum_probs=70.8
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc--cchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCC
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQK--FMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGA 82 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~--~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Ga 82 (115)
-+.|.|+.+.++.+.+. .-+||-+.+ ..|.+|.. +.+...+.++++|+.. +.|+.+-+|| +++++..+.+ +|
T Consensus 147 lvaP~t~~eRi~~ia~~--a~gFiY~Vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~A 221 (252)
T 3tha_A 147 LVSVTTPKERVKKLVKH--AKGFIYLLA-SIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VA 221 (252)
T ss_dssp EEETTSCHHHHHHHHTT--CCSCEEEEC-CSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TS
T ss_pred EeCCCCcHHHHHHHHHh--CCCeEEEEe-cCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cC
Confidence 45788999999998832 235555533 45666654 3344566788888774 7999999999 8999999876 69
Q ss_pred CEEEEcccccC---CCCHHHHHHHHHHHH
Q 033598 83 NCIVAGSSVFG---APEPAHVISLMRKSV 108 (115)
Q Consensus 83 d~iv~Gsaif~---~~d~~~~~~~l~~~~ 108 (115)
|++|+||++.+ ..++.+..+.+++.+
T Consensus 222 DGVIVGSAiVk~i~~~~~~~~~~~~~~~~ 250 (252)
T 3tha_A 222 DGVIVGTSIVKCFKQGNLDIIMKDIEEIF 250 (252)
T ss_dssp SEEEECHHHHHHTTSSCHHHHHHHHHHHC
T ss_pred CEEEECHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99999999864 446666666665543
No 79
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.35 E-value=6.6e-07 Score=65.74 Aligned_cols=74 Identities=12% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.||-|....+- .++|+|- ++|+.. . ...+.|+.++.-.|++++.+.||||++|+.++.++|+..++.||
T Consensus 120 ~TptE~~~A~~---~Gad~vK---~FPa~~---~--gG~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgGs 188 (217)
T 3lab_A 120 ATASEVMIAAQ---AGITQLK---CFPASA---I--GGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGGS 188 (217)
T ss_dssp CSHHHHHHHHH---TTCCEEE---ETTTTT---T--THHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEES
T ss_pred CCHHHHHHHHH---cCCCEEE---ECcccc---c--cCHHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCCEEEEECh
Confidence 57777777766 7899995 456421 1 13566888888888999999999999999999999999998889
Q ss_pred cccCC
Q 033598 90 SVFGA 94 (115)
Q Consensus 90 aif~~ 94 (115)
.++..
T Consensus 189 ~l~~~ 193 (217)
T 3lab_A 189 WLTES 193 (217)
T ss_dssp GGGCH
T ss_pred hhcCh
Confidence 88864
No 80
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=98.33 E-value=1.3e-06 Score=66.55 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=50.7
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
..+|..|..+.+- .++|+|++-...| +.+.++-+. ..+++++++.||||++|++++.++|+|+|.+
T Consensus 204 Ev~tl~ea~eAl~---aGaD~I~LDn~~~---------~~l~~av~~--~~~~v~ieaSGGIt~~~i~~~a~tGVD~Isv 269 (287)
T 3tqv_A 204 EVTNLDELNQAIA---AKADIVMLDNFSG---------EDIDIAVSI--ARGKVALEVSGNIDRNSIVAIAKTGVDFISV 269 (287)
T ss_dssp EESSHHHHHHHHH---TTCSEEEEESCCH---------HHHHHHHHH--HTTTCEEEEESSCCTTTHHHHHTTTCSEEEC
T ss_pred EeCCHHHHHHHHH---cCCCEEEEcCCCH---------HHHHHHHHh--hcCCceEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 3444434444444 6899999855333 333332222 2357999999999999999999999999999
Q ss_pred cccccCC
Q 033598 88 GSSVFGA 94 (115)
Q Consensus 88 Gsaif~~ 94 (115)
|+.+-+.
T Consensus 270 Galt~sa 276 (287)
T 3tqv_A 270 GAITKHI 276 (287)
T ss_dssp SHHHHSB
T ss_pred ChhhcCC
Confidence 9876544
No 81
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.32 E-value=2e-06 Score=63.34 Aligned_cols=85 Identities=21% Similarity=0.182 Sum_probs=55.2
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa 90 (115)
+.+..+.+.+ .++++|.+..+... |..... .++.++++++.. ++|+.+.|||+ ++++..+.++|||.+++||+
T Consensus 158 ~~e~~~~~~~--~G~~~i~~t~~~~~--g~~~g~-~~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsa 231 (266)
T 2w6r_A 158 LRDWVVEVEK--RGAGEILLTSIDRD--GTKSGY-DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASV 231 (266)
T ss_dssp HHHHHHHHHH--TTCSEEEEEETTTT--TTCSCC-CHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTT
T ss_pred HHHHHHHHHH--cCCCEEEEEeecCC--CCcCCC-CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHH
Confidence 4455455441 47999987655432 222211 366778887764 79999999999 59999999999999999999
Q ss_pred ccCCCCH-HHHHH
Q 033598 91 VFGAPEP-AHVIS 102 (115)
Q Consensus 91 if~~~d~-~~~~~ 102 (115)
+++.++. .+..+
T Consensus 232 l~~~~~~~~~~~~ 244 (266)
T 2w6r_A 232 FHFREIDMRELKE 244 (266)
T ss_dssp TC-----------
T ss_pred HHcCCCCHHHHHH
Confidence 9987743 44333
No 82
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.31 E-value=9.1e-07 Score=67.86 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=59.1
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCC-CCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGF-GGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~-~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
..+....+.+ .++|+|++.+..+|. .|+. ..++.+.++++.. ++|+.++|||+ .+++..+...|||.+.+||
T Consensus 133 s~~~a~~a~~--~GaD~i~v~g~~~GG~~G~~---~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs 206 (326)
T 3bo9_A 133 SDSLARMVER--AGADAVIAEGMESGGHIGEV---TTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGT 206 (326)
T ss_dssp SHHHHHHHHH--TTCSCEEEECTTSSEECCSS---CHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred CHHHHHHHHH--cCCCEEEEECCCCCccCCCc---cHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEech
Confidence 4444444441 579999988765543 3432 3566777777654 79999999998 9999999999999999999
Q ss_pred cccCCCC
Q 033598 90 SVFGAPE 96 (115)
Q Consensus 90 aif~~~d 96 (115)
+++..++
T Consensus 207 ~~~~~~e 213 (326)
T 3bo9_A 207 RFVASVE 213 (326)
T ss_dssp HHHTBSS
T ss_pred HHHcCcc
Confidence 9887554
No 83
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.31 E-value=7.4e-07 Score=68.07 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=51.9
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCChhhHHHHHHcCCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~~~ni~~l~~~Gad~iv 86 (115)
..+|. +.+.+.++ .++|+|++-+ +.++. ++++++.. ++++|++.||||++|++.+.++|+|.+.
T Consensus 214 ev~tl-ee~~eA~~--aGaD~I~ld~---------~~~e~---l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~GvD~is 278 (296)
T 1qap_A 214 EVENL-DELDDALK--AGADIIMLDN---------FNTDQ---MREAVKRVNGQARLEVSGNVTAETLREFAETGVDFIS 278 (296)
T ss_dssp EESSH-HHHHHHHH--TTCSEEEESS---------CCHHH---HHHHHHTTCTTCCEEECCCSCHHHHHHHHHTTCSEEE
T ss_pred EeCCH-HHHHHHHH--cCCCEEEECC---------CCHHH---HHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEE
Confidence 34454 43444442 5899998743 33333 44444443 4699999999999999999999999999
Q ss_pred EcccccCCC
Q 033598 87 AGSSVFGAP 95 (115)
Q Consensus 87 ~Gsaif~~~ 95 (115)
+|+.+++++
T Consensus 279 vGsli~~a~ 287 (296)
T 1qap_A 279 VGALTKHVR 287 (296)
T ss_dssp CSHHHHEEE
T ss_pred EeHHHcCCC
Confidence 999877543
No 84
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.29 E-value=1.9e-06 Score=66.53 Aligned_cols=72 Identities=17% Similarity=0.237 Sum_probs=50.4
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
.+|. +.+++.++ .++|+|++-+. .++.+.++.+. ..++++|++.||||++|++++.++|+|++++|
T Consensus 238 Vdtl-dea~eAl~--aGaD~I~LDn~---------~~~~l~~av~~--l~~~v~ieaSGGIt~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 238 TETL-AELEEAIS--AGADIIMLDNF---------SLEMMREAVKI--NAGRAALENSGNITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp ESSH-HHHHHHHH--TTCSEEEEESC---------CHHHHHHHHHH--HTTSSEEEEESSCCHHHHHHHHTTTCSEEECT
T ss_pred ECCH-HHHHHHHH--cCCCEEEECCC---------CHHHHHHHHHH--hCCCCeEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 3444 44444442 58999998553 23343333222 23579999999999999999999999999999
Q ss_pred ccccCC
Q 033598 89 SSVFGA 94 (115)
Q Consensus 89 saif~~ 94 (115)
+...++
T Consensus 304 alt~sa 309 (320)
T 3paj_A 304 ALTKHL 309 (320)
T ss_dssp HHHHSB
T ss_pred ceecCC
Confidence 876544
No 85
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=98.28 E-value=3.2e-06 Score=64.71 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=50.9
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
-.+|. +.+++.++ .++|.|++-... ++.+.+.-+. ...++.+++.||||++|++.+.++|+|+|++
T Consensus 213 Ev~tl-~e~~eAl~--aGaDiImLDn~s---------~~~l~~av~~--~~~~v~leaSGGIt~~~i~~~A~tGVD~Isv 278 (300)
T 3l0g_A 213 ECDNI-SQVEESLS--NNVDMILLDNMS---------ISEIKKAVDI--VNGKSVLEVSGCVNIRNVRNIALTGVDYISI 278 (300)
T ss_dssp EESSH-HHHHHHHH--TTCSEEEEESCC---------HHHHHHHHHH--HTTSSEEEEESSCCTTTHHHHHTTTCSEEEC
T ss_pred EECCH-HHHHHHHH--cCCCEEEECCCC---------HHHHHHHHHh--hcCceEEEEECCCCHHHHHHHHHcCCCEEEe
Confidence 34443 44444442 689999986533 3333332222 2347999999999999999999999999999
Q ss_pred cccccCCC
Q 033598 88 GSSVFGAP 95 (115)
Q Consensus 88 Gsaif~~~ 95 (115)
|+...+++
T Consensus 279 Galthsa~ 286 (300)
T 3l0g_A 279 GCITNSFQ 286 (300)
T ss_dssp GGGTSSCC
T ss_pred CccccCCC
Confidence 98775543
No 86
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=98.28 E-value=1.4e-06 Score=64.55 Aligned_cols=47 Identities=21% Similarity=0.399 Sum_probs=39.7
Q ss_pred EEEEcCCChh-----------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHH
Q 033598 63 IEVDGGLGPS-----------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 63 i~~dGGI~~~-----------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
+.+..||.++ |..++.++|+|++|+||+||+++||.++++++++.+.
T Consensus 180 l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~i~ 237 (239)
T 3tr2_A 180 LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKDIK 237 (239)
T ss_dssp EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHC-
T ss_pred EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHh
Confidence 6688999876 4778899999999999999999999999999988664
No 87
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.26 E-value=2.5e-06 Score=65.25 Aligned_cols=61 Identities=21% Similarity=0.230 Sum_probs=46.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
.++|+|++-...| +.+.+.-+ ...+++++++.||||++|++++.++|+|+|.+|+...+++
T Consensus 228 aGaD~I~LDn~~~---------~~l~~av~--~i~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~lt~sa~ 288 (298)
T 3gnn_A 228 HGARSVLLDNFTL---------DMMRDAVR--VTEGRAVLEVSGGVNFDTVRAIAETGVDRISIGALTKDVR 288 (298)
T ss_dssp TTCEEEEEESCCH---------HHHHHHHH--HHTTSEEEEEESSCSTTTHHHHHHTTCSEEECGGGGTSCC
T ss_pred cCCCEEEECCCCH---------HHHHHHHH--HhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCeecCCC
Confidence 5899999865333 33333221 1246799999999999999999999999999999876654
No 88
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.21 E-value=2.5e-06 Score=65.42 Aligned_cols=79 Identities=23% Similarity=0.253 Sum_probs=58.0
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCC-CCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGF-GGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~-~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.++..+.+.+ .++|+|.+.+..+|. .|+. ..++.++++++.. ++|+.++|||+ .+++..+...|||.+.+||
T Consensus 119 ~~~~a~~~~~--~GaD~i~v~g~~~GG~~g~~---~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs 192 (332)
T 2z6i_A 119 SVALAKRMEK--IGADAVIAEGMEAGGHIGKL---TTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGT 192 (332)
T ss_dssp SHHHHHHHHH--TTCSCEEEECTTSSEECCSS---CHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHH--cCCCEEEEECCCCCCCCCCc---cHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecH
Confidence 3444444441 579999987654432 2432 3556677777654 79999999998 9999999999999999999
Q ss_pred cccCCCC
Q 033598 90 SVFGAPE 96 (115)
Q Consensus 90 aif~~~d 96 (115)
+++..++
T Consensus 193 ~~l~~~e 199 (332)
T 2z6i_A 193 RFVVAKE 199 (332)
T ss_dssp HHHTBTT
T ss_pred HHhcCcc
Confidence 9887653
No 89
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=98.17 E-value=2.8e-06 Score=63.64 Aligned_cols=57 Identities=25% Similarity=0.404 Sum_probs=44.7
Q ss_pred HHHHHhhCC-CCcEEEEcCCChh-----------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 51 VRSLRNRYP-SLDIEVDGGLGPS-----------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 51 i~~l~~~~~-~~~i~~dGGI~~~-----------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
++.+|+..+ ++ +.+..||.++ |..++.++|+|.+|+|++||+++||.++++++++.+
T Consensus 186 ~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 186 ASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL 254 (255)
T ss_dssp HHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHHhh
Confidence 334444333 34 6688999876 467889999999999999999999999999998754
No 90
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.15 E-value=2.1e-05 Score=59.33 Aligned_cols=105 Identities=20% Similarity=0.343 Sum_probs=68.8
Q ss_pred EEecCCCCHHhH---HHhHhCCCCCCEEEEEee-------e--------------CCCCCcccchhHHHHHHHHHhhCC-
Q 033598 5 VALKPGTSVEEV---YPLVEGANPVEMVLVMTV-------E--------------PGFGGQKFMPEMMDKVRSLRNRYP- 59 (115)
Q Consensus 5 lal~p~t~~~~~---~~~~~~~~~vD~vlvm~v-------~--------------pG~~gq~~~~~~~~ki~~l~~~~~- 59 (115)
+=+.|+...+.+ ...+++ .++|+|.+-.. + -|++|....+..++.++++++..+
T Consensus 163 vKi~~~~~~~~~~~~a~~~~~-~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~ 241 (311)
T 1jub_A 163 VKLPPYFDLVHFDIMAEILNQ-FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKP 241 (311)
T ss_dssp EEECCCCSHHHHHHHHHHHTT-SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCT
T ss_pred EEECCCCCHHHHHHHHHHHHH-cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCC
Confidence 335565444333 334433 47999876332 1 123344444566778888887653
Q ss_pred CCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccC-CCCH-HHHHHHHHHHHHH
Q 033598 60 SLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFG-APEP-AHVISLMRKSVED 110 (115)
Q Consensus 60 ~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~-~~d~-~~~~~~l~~~~~~ 110 (115)
++||.+.||| +.+.+.++..+|||.+.+|++++. .++. .+..+.+++.+.+
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~ 295 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQ 295 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHH
Confidence 7999999999 789999988999999999999884 6654 2333345554444
No 91
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.13 E-value=8.8e-06 Score=63.68 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=58.1
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCc-----ccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcC
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQ-----KFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAG 81 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq-----~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~G 81 (115)
+..|+.+...-.- .++|+|.+ +.+||.... .+....+..|.++++... |+.+||||+ .+++...+++|
T Consensus 148 ~V~T~e~A~~a~~---aGaD~I~V-g~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~--PVIAdGGI~~~~di~kALa~G 221 (361)
T 3r2g_A 148 NVATYAGADYLAS---CGADIIKA-GIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR--SIVADGGIKTSGDIVKALAFG 221 (361)
T ss_dssp EECSHHHHHHHHH---TTCSEEEE-CCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS--EEEEESCCCSHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHH---cCCCEEEE-cCCCCcCccccccCCccHHHHHHHHHHHHhCC--CEEEECCCCCHHHHHHHHHcC
Confidence 4556655554444 68999998 677875321 111125566666655432 999999995 99999999999
Q ss_pred CCEEEEcccccCC
Q 033598 82 ANCIVAGSSVFGA 94 (115)
Q Consensus 82 ad~iv~Gsaif~~ 94 (115)
||.+.+|+.++..
T Consensus 222 Ad~V~iGr~f~~t 234 (361)
T 3r2g_A 222 ADFVMIGGMLAGS 234 (361)
T ss_dssp CSEEEESGGGTTB
T ss_pred CCEEEEChHHhCC
Confidence 9999999998865
No 92
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.12 E-value=2.1e-05 Score=59.33 Aligned_cols=72 Identities=18% Similarity=0.245 Sum_probs=54.2
Q ss_pred CCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccC-CCCHH-HHHHHHHHHHHH
Q 033598 39 GGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFG-APEPA-HVISLMRKSVED 110 (115)
Q Consensus 39 ~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~-~~d~~-~~~~~l~~~~~~ 110 (115)
+|....+..++.++++++..+++|+.+.|||+ .+++.++..+|||.+.+|++++. .++.- +..+.++..+..
T Consensus 223 sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~~~~~~ 297 (314)
T 2e6f_A 223 GGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEIMAR 297 (314)
T ss_dssp ESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHHHHHHHH
Confidence 44444456678888888776689999999995 99999988999999999999884 67653 333345555544
No 93
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.07 E-value=9.4e-06 Score=61.95 Aligned_cols=58 Identities=17% Similarity=0.303 Sum_probs=49.0
Q ss_pred HHHHhhCCCCcEEEEcCCChh------hHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 52 RSLRNRYPSLDIEVDGGLGPS------TIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 52 ~~l~~~~~~~~i~~dGGI~~~------ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+++.+.. .+|+.+.||++.+ +++...++||+++++|++||+++||.+.++.+++.+++
T Consensus 216 ~~vv~~~-~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 216 ERIVAGC-PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHTC-SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhC
Confidence 4444433 5899999999853 68888899999999999999999999999999988764
No 94
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.07 E-value=1.6e-05 Score=62.08 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=54.5
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCC--Cc---ccchhHHHHHHHHHhhC--CCCcEEEEcCC-ChhhHHHHHHcCCC
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFG--GQ---KFMPEMMDKVRSLRNRY--PSLDIEVDGGL-GPSTIAEAASAGAN 83 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~--gq---~~~~~~~~ki~~l~~~~--~~~~i~~dGGI-~~~ni~~l~~~Gad 83 (115)
..+..+.+++ .++|+|.+ +..||.- .+ .+....+..+.++++.. .++|+.++||| +.+++..++.+|||
T Consensus 155 t~e~A~~l~~--aGaD~I~V-G~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd 231 (361)
T 3khj_A 155 TEEATKELIE--NGADGIKV-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGAS 231 (361)
T ss_dssp SHHHHHHHHH--TTCSEEEE-CSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCS
T ss_pred CHHHHHHHHH--cCcCEEEE-ecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCC
Confidence 3444455442 68999987 6667641 11 11112334444443321 26999999999 79999999999999
Q ss_pred EEEEcccccCCC
Q 033598 84 CIVAGSSVFGAP 95 (115)
Q Consensus 84 ~iv~Gsaif~~~ 95 (115)
.+.+||+++..+
T Consensus 232 ~V~vGs~~~~t~ 243 (361)
T 3khj_A 232 SVMIGSILAGTE 243 (361)
T ss_dssp EEEESTTTTTBT
T ss_pred EEEEChhhhcCC
Confidence 999999988753
No 95
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.06 E-value=5.2e-07 Score=66.13 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
++|++.+..+.+....+. ..++.++++++.. ++|+.+.|||+ ++++..+.++|+|.+++||++++.+++.+.+++
T Consensus 169 G~~~i~~t~~~~~g~~~g---~~~~~~~~i~~~~-~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 169 GAGEILLTSIDRDGTKSG---YDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEecccCCCCcCC---CCHHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHH
Confidence 688888766544311111 1334566666553 79999999998 999999999999999999999999988665544
No 96
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.99 E-value=1.5e-05 Score=58.92 Aligned_cols=82 Identities=16% Similarity=0.284 Sum_probs=56.4
Q ss_pred EEecCCCCH------------HhHHHhHhCCC--CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC
Q 033598 5 VALKPGTSV------------EEVYPLVEGAN--PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG 70 (115)
Q Consensus 5 lal~p~t~~------------~~~~~~~~~~~--~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~ 70 (115)
+.+||++++ +.+..|...+. ..++|-+-. .|..+ ..+.++++++...+.|+.+=|||+
T Consensus 119 ivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~--sG~~~------~~~~i~~i~~~~~~~Pv~vGGGI~ 190 (228)
T 3vzx_A 119 CIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--SGVLG------DIEAVKKTKAVLETSTLFYGGGIK 190 (228)
T ss_dssp EECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--TTSCC------CHHHHHHHHHHCSSSEEEEESSCC
T ss_pred EEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcC------CHHHHHHHHHhcCCCCEEEeCCCC
Confidence 467787777 66666653211 356665443 33222 345567777765468999999995
Q ss_pred -hhhHHHHHHcCCCEEEEcccccCCC
Q 033598 71 -PSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 71 -~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
++.++.+. .|||.+|+||++++.+
T Consensus 191 t~e~a~~~~-~gAD~VVVGSa~v~~p 215 (228)
T 3vzx_A 191 DAETAKQYA-EHADVIVVGNAVYEDF 215 (228)
T ss_dssp SHHHHHHHH-TTCSEEEECTHHHHCH
T ss_pred CHHHHHHHH-hCCCEEEEChHHhcCH
Confidence 78899887 6999999999999743
No 97
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.97 E-value=4.9e-05 Score=59.00 Aligned_cols=108 Identities=19% Similarity=0.309 Sum_probs=74.5
Q ss_pred eEEEecCCCCHHhHHHhHhC--CCCCCEEEEE-------eee------------CCCCCcccchhHHHHHHHHHhhCC-C
Q 033598 3 PGVALKPGTSVEEVYPLVEG--ANPVEMVLVM-------TVE------------PGFGGQKFMPEMMDKVRSLRNRYP-S 60 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~--~~~vD~vlvm-------~v~------------pG~~gq~~~~~~~~ki~~l~~~~~-~ 60 (115)
+.+=|.|++..+.+...++. ++.+|++... .++ -|++|....+..++.+.++++..+ +
T Consensus 196 V~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ 275 (345)
T 3oix_A 196 LGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPS 275 (345)
T ss_dssp EEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTT
T ss_pred eEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCC
Confidence 34556788777777766654 3467766422 122 134555666677888999988764 7
Q ss_pred CcEEEEcCCC-hhhHHHHHHcCCCEEEEccc-ccCCCCH-HHHHHHHHHHHHH
Q 033598 61 LDIEVDGGLG-PSTIAEAASAGANCIVAGSS-VFGAPEP-AHVISLMRKSVED 110 (115)
Q Consensus 61 ~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa-if~~~d~-~~~~~~l~~~~~~ 110 (115)
+||.+.|||. .+.+.+++.+|||.+-+|++ +|..+.. .+..+.|++.+++
T Consensus 276 ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~~~l~~ 328 (345)
T 3oix_A 276 IQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKELXAIMTE 328 (345)
T ss_dssp SEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHHHHHHH
Confidence 9999999995 78888888999999999999 7776654 3333445554443
No 98
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.95 E-value=5.4e-05 Score=58.99 Aligned_cols=107 Identities=19% Similarity=0.290 Sum_probs=73.5
Q ss_pred EEEecCCCCHHhHHHhHh---CCCCCCEEEE-------Eeee--------------CCCCCcccchhHHHHHHHHHhhCC
Q 033598 4 GVALKPGTSVEEVYPLVE---GANPVEMVLV-------MTVE--------------PGFGGQKFMPEMMDKVRSLRNRYP 59 (115)
Q Consensus 4 Glal~p~t~~~~~~~~~~---~~~~vD~vlv-------m~v~--------------pG~~gq~~~~~~~~ki~~l~~~~~ 59 (115)
.+=+.|+...+.+..+++ ++..+|.|.+ |.++ -|++|....+..++.+.++++..+
T Consensus 197 ~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~ 276 (354)
T 4ef8_A 197 GVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCP 276 (354)
T ss_dssp EEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCT
T ss_pred EEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCC
Confidence 445667766665555543 3224999875 2222 134556666778888999988866
Q ss_pred CCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCC-CCH-HHHHHHHHHHHHH
Q 033598 60 SLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGA-PEP-AHVISLMRKSVED 110 (115)
Q Consensus 60 ~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~-~d~-~~~~~~l~~~~~~ 110 (115)
++||.+.|||. .+.+.+++.+|||.+-+|++++.. +.. .+..+.|++.++.
T Consensus 277 ~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~~~m~~ 330 (354)
T 4ef8_A 277 GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAK 330 (354)
T ss_dssp TSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999995 888888889999999999997754 554 3333445554443
No 99
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.94 E-value=1.8e-05 Score=57.54 Aligned_cols=85 Identities=12% Similarity=0.178 Sum_probs=58.8
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHc-----C-CC
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASA-----G-AN 83 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~-----G-ad 83 (115)
++.+..+.+. + .++++|.+..+... |....+ .++.++++++.. ++|+.+.|||+ ++++..+.+. | +|
T Consensus 145 ~~~e~~~~~~-~-~G~~~i~~t~~~~~--g~~~g~-~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~~~~~~G~ad 218 (241)
T 1qo2_A 145 DPVSLLKRLK-E-YGLEEIVHTEIEKD--GTLQEH-DFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKVHTETNGLLK 218 (241)
T ss_dssp CHHHHHHHHH-T-TTCCEEEEEETTHH--HHTCCC-CHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHHHHHTTTSEE
T ss_pred CHHHHHHHHH-h-CCCCEEEEEeeccc--ccCCcC-CHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhcccccCCeEe
Confidence 4445555554 2 47999987554321 211111 356677776654 79999999999 5999999998 9 99
Q ss_pred EEEEcccccCCC-CHHHHH
Q 033598 84 CIVAGSSVFGAP-EPAHVI 101 (115)
Q Consensus 84 ~iv~Gsaif~~~-d~~~~~ 101 (115)
.+++||++++.+ ++.+..
T Consensus 219 gv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 219 GVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp EEEECHHHHTTSSCHHHHH
T ss_pred EEEeeHHHHcCCCCHHHHH
Confidence 999999999766 444443
No 100
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.93 E-value=4.3e-05 Score=57.06 Aligned_cols=76 Identities=16% Similarity=0.314 Sum_probs=57.6
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
++|+|++= ++++.+ |..+ ++...++.+..| +.++.+-|||+ ++.+..+.++ +|.|++|++|.+++||.+.++
T Consensus 171 g~~iIGin--nr~l~t--~~~d-~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 171 RPKIIGIN--TRDLDT--FEIK-KNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLE 244 (251)
T ss_dssp CCSEEEEE--CBCTTT--CCBC-TTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHH
T ss_pred CCCEEEEe--Cccccc--CCCC-HHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHH
Confidence 78988642 344433 3221 344455555544 57888999996 9999999999 999999999999999999998
Q ss_pred HHHH
Q 033598 103 LMRK 106 (115)
Q Consensus 103 ~l~~ 106 (115)
+|..
T Consensus 245 ~l~~ 248 (251)
T 1i4n_A 245 EMRA 248 (251)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 101
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.88 E-value=4.9e-05 Score=59.48 Aligned_cols=79 Identities=25% Similarity=0.351 Sum_probs=53.5
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCC--c---ccchhHHHHHHHHHhh--CCCCcEEEEcCC-ChhhHHHHHHcCCCE
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGG--Q---KFMPEMMDKVRSLRNR--YPSLDIEVDGGL-GPSTIAEAASAGANC 84 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~g--q---~~~~~~~~ki~~l~~~--~~~~~i~~dGGI-~~~ni~~l~~~Gad~ 84 (115)
.+..+.+.+ .++|+|.+ ...||... . .+....+..+.++++. ..++|+.++||| +.+++...+.+|||.
T Consensus 160 ~e~A~~a~~--aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~ 236 (366)
T 4fo4_A 160 AEGARALIE--AGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASC 236 (366)
T ss_dssp HHHHHHHHH--HTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHH--cCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCE
Confidence 344444441 58999987 56676421 1 0111234445555432 137999999999 799999999999999
Q ss_pred EEEcccccCC
Q 033598 85 IVAGSSVFGA 94 (115)
Q Consensus 85 iv~Gsaif~~ 94 (115)
+.+||++...
T Consensus 237 V~vGs~f~~t 246 (366)
T 4fo4_A 237 VMVGSMFAGT 246 (366)
T ss_dssp EEESTTTTTB
T ss_pred EEEChHhhcC
Confidence 9999998764
No 102
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.86 E-value=8.3e-05 Score=58.12 Aligned_cols=105 Identities=16% Similarity=0.234 Sum_probs=70.2
Q ss_pred EEEecCCCCHHh---HHHhHhCCCCCCEEEEEeeeC---------------CCCCcccchhHHHHHHHHHhhCC-CCcEE
Q 033598 4 GVALKPGTSVEE---VYPLVEGANPVEMVLVMTVEP---------------GFGGQKFMPEMMDKVRSLRNRYP-SLDIE 64 (115)
Q Consensus 4 Glal~p~t~~~~---~~~~~~~~~~vD~vlvm~v~p---------------G~~gq~~~~~~~~ki~~l~~~~~-~~~i~ 64 (115)
.+=+.|+...+. +...+++ .++|.|.+-.... |++|....+..++.++++++..+ ++||.
T Consensus 224 ~vKi~p~~~~~~~~~ia~~~~~-aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI 302 (367)
T 3zwt_A 224 LVKIAPDLTSQDKEDIASVVKE-LGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPII 302 (367)
T ss_dssp EEEECSCCCHHHHHHHHHHHHH-HTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEE
Confidence 344567655433 3333333 5799998654321 34455555667788999988764 79999
Q ss_pred EEcCCC-hhhHHHHHHcCCCEEEEcccc-cCCCCH-HHHHHHHHHHHH
Q 033598 65 VDGGLG-PSTIAEAASAGANCIVAGSSV-FGAPEP-AHVISLMRKSVE 109 (115)
Q Consensus 65 ~dGGI~-~~ni~~l~~~Gad~iv~Gsai-f~~~d~-~~~~~~l~~~~~ 109 (115)
+.|||+ .+.+.+++.+|||.+.+|+++ ++.+.. .+..+.+.+.++
T Consensus 303 ~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~~m~ 350 (367)
T 3zwt_A 303 GVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLK 350 (367)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHHHHH
Confidence 999995 888999999999999999997 654543 233333444443
No 103
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.78 E-value=4.2e-05 Score=58.24 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=57.4
Q ss_pred EEEecCC-----CCHHhHHHhHhCCC-CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCChhhHHH
Q 033598 4 GVALKPG-----TSVEEVYPLVEGAN-PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLGPSTIAE 76 (115)
Q Consensus 4 Glal~p~-----t~~~~~~~~~~~~~-~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~~~ni~~ 76 (115)
+++++.. +|.+.++.++ + ++|.||- .| +++-..+.++.|+++.+.. ..++|.+.||||.+|+++
T Consensus 155 ~vTFHRAFD~~~d~~~Ale~Li---~lGvdrILT----SG--~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~ 225 (287)
T 3iwp_A 155 PVTFHRAFDMVHDPMAALETLL---TLGFERVLT----SG--CDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQR 225 (287)
T ss_dssp CEEECGGGGGCSCHHHHHHHHH---HHTCSEEEE----CT--TSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHH
T ss_pred cEEEECchhccCCHHHHHHHHH---HcCCCEEEC----CC--CCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHH
Confidence 5566655 6888888888 6 8999984 12 2333467778888876653 359999999999999999
Q ss_pred HHH-cCCCEEEEc
Q 033598 77 AAS-AGANCIVAG 88 (115)
Q Consensus 77 l~~-~Gad~iv~G 88 (115)
+.+ +|++.|=..
T Consensus 226 l~~~tG~~~~H~S 238 (287)
T 3iwp_A 226 ILEGSGATEFHCS 238 (287)
T ss_dssp HHHHHCCSEEEEC
T ss_pred HHHhhCCCEEeEC
Confidence 877 999988554
No 104
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.77 E-value=6.3e-05 Score=55.47 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=64.2
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~ 87 (115)
...|++..+.|.+ .++|.+.+.-....+.|.....+. ++++.+.. .+|+++.|||+ .+++..+.++|||-+++
T Consensus 30 ~~dP~~~a~~~~~--~gad~lhvvDld~a~~~~~~~~~~---i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii 103 (243)
T 4gj1_A 30 KYNPLKKFKEYEK--AGAKELHLVDLTGAKDPSKRQFAL---IEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVI 103 (243)
T ss_dssp CCCHHHHHHHHHH--HTCCEEEEEEHHHHHCGGGCCHHH---HHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHH--CCCCEEEEEecCcccccchhHHHH---HHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEE
Confidence 3578888777773 489999988877766666554444 55555553 69999999995 69999999999999999
Q ss_pred cccccCCCCH
Q 033598 88 GSSVFGAPEP 97 (115)
Q Consensus 88 Gsaif~~~d~ 97 (115)
+|+.++.++.
T Consensus 104 ~t~a~~~p~l 113 (243)
T 4gj1_A 104 GSMAIKDATL 113 (243)
T ss_dssp CTTTTTCHHH
T ss_pred ccccccCCch
Confidence 9999876554
No 105
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.76 E-value=0.00022 Score=50.03 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=59.2
Q ss_pred HHhHHHhHhCCCCCCEEEEEee-eCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTV-EPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v-~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa 90 (115)
.+.++.+.. .....++++.+ ..|. +..+. .+.|+++++.. +.|+.+.||++ ++++.++.+.|+|.+++||+
T Consensus 133 ~~~i~~~~~--~~~~~vli~~~~~~g~-~~g~~---~~~i~~~~~~~-~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a 205 (237)
T 3cwo_X 133 RDWVVEVEK--RGAGEILLTSIDRDGT-KSGYD---TEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASV 205 (237)
T ss_dssp HHHHHHHHH--HTCSEEEEEETTTTTC-CSCCC---HHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHhh--cCCCeEEEEecCCCCc-ccccc---HHHHHHHHHhc-CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHH
Confidence 344444431 24667777765 2332 22222 56677777654 79999999998 78999999999999999999
Q ss_pred cc-CCCCHHHHHHHHH
Q 033598 91 VF-GAPEPAHVISLMR 105 (115)
Q Consensus 91 if-~~~d~~~~~~~l~ 105 (115)
++ +..++.+..+.++
T Consensus 206 ~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 206 FHFREIDVRELKEYLK 221 (237)
T ss_dssp HHTTSSCHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHH
Confidence 85 4457777666554
No 106
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.74 E-value=9.8e-05 Score=53.89 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=59.0
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa 90 (115)
+++..+.+. + .++|+|.+......+.++.. .++.++++++.. ++|+.+.|||+ ++.+..+.+.|||.+++|++
T Consensus 37 ~~~~a~~~~-~-~G~~~i~v~d~~~~~~~~~~---~~~~i~~i~~~~-~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 37 LRDWVVEVE-K-RGAGEILLTSIDRDGTKSGY---DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTA 110 (247)
T ss_dssp HHHHHHHHH-H-TTCSEEEEEETTTTTCSSCC---CHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEECCSHH
T ss_pred HHHHHHHHH-H-cCCCEEEEEecCcccCCCcc---cHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhH
Confidence 345555555 2 58999988766554443332 345677777764 79999999997 58899999999999999999
Q ss_pred ccCCCCH
Q 033598 91 VFGAPEP 97 (115)
Q Consensus 91 if~~~d~ 97 (115)
.+..++.
T Consensus 111 ~l~dp~~ 117 (247)
T 3tdn_A 111 AVENPSL 117 (247)
T ss_dssp HHHCTHH
T ss_pred HhhChHH
Confidence 8876653
No 107
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.73 E-value=4.4e-05 Score=56.59 Aligned_cols=61 Identities=18% Similarity=0.350 Sum_probs=46.1
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccCC
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~ 94 (115)
...+|-+-+ .|..| ..+.++++|+..++.|+.+=||| +++.++.+.+ |||.+|+||++++.
T Consensus 159 g~~~vY~e~--sG~~g------~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 159 RLPVMYIEY--SGIYG------DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp CCSEEEEEC--TTSCC------CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CCCEEEEec--CCCcC------CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 446666544 55544 24557777776557999999999 5788888887 99999999999973
No 108
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.62 E-value=7.9e-05 Score=57.62 Aligned_cols=71 Identities=18% Similarity=0.341 Sum_probs=49.9
Q ss_pred CCCCEEEEEeeeC--CCCCcc---cchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 24 NPVEMVLVMTVEP--GFGGQK---FMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 24 ~~vD~vlvm~v~p--G~~gq~---~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
.++|+|.+-+... |++|.. ..+..++.+.++++..+++|+.+.||| +.+.+..+++ |||.+.+|++++..+
T Consensus 156 aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P 232 (350)
T 3b0p_A 156 AGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDP 232 (350)
T ss_dssp TTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCG
T ss_pred cCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCc
Confidence 5899998643322 344421 112346778888887668999999999 7899999988 999999998875443
No 109
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.61 E-value=0.00027 Score=56.90 Aligned_cols=80 Identities=21% Similarity=0.290 Sum_probs=57.0
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCC--cc---c---chhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCC
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGG--QK---F---MPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGA 82 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~g--q~---~---~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Ga 82 (115)
..+..+.+.+ .++|+|.+ +.+||... .. + ....+..+.++++.. ++|+.++|||+ .+++..+..+||
T Consensus 306 t~~~a~~l~~--aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GA 381 (514)
T 1jcn_A 306 TAAQAKNLID--AGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGA 381 (514)
T ss_dssp SHHHHHHHHH--HTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred hHHHHHHHHH--cCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCC
Confidence 3444555441 48999988 66676320 00 1 234556677776653 79999999995 799999999999
Q ss_pred CEEEEcccccCCC
Q 033598 83 NCIVAGSSVFGAP 95 (115)
Q Consensus 83 d~iv~Gsaif~~~ 95 (115)
|.+.+|+++...+
T Consensus 382 d~V~iG~~~l~~~ 394 (514)
T 1jcn_A 382 STVMMGSLLAATT 394 (514)
T ss_dssp SEEEESTTTTTST
T ss_pred CeeeECHHHHcCC
Confidence 9999999987643
No 110
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.58 E-value=0.00024 Score=51.57 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=57.0
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.+++..+.+.+ .++|++.+.-...++.+. ...++.++++++.. ++|+.+.|||+ .+.+..+.++|||.+++|+
T Consensus 32 d~~~~a~~~~~--~Gad~i~v~d~~~~~~~~---~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 105 (252)
T 1ka9_F 32 DPVEAARAYDE--AGADELVFLDISATHEER---AILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKVSVNS 105 (252)
T ss_dssp CHHHHHHHHHH--HTCSCEEEEECCSSTTCH---HHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred CHHHHHHHHHH--cCCCEEEEEcCCccccCc---cccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 34555555552 479998765332222222 23456677887764 79999999998 7899999999999999999
Q ss_pred cccCCCC
Q 033598 90 SVFGAPE 96 (115)
Q Consensus 90 aif~~~d 96 (115)
+.+..++
T Consensus 106 ~~l~~p~ 112 (252)
T 1ka9_F 106 AAVRRPE 112 (252)
T ss_dssp HHHHCTH
T ss_pred HHHhCcH
Confidence 9886553
No 111
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.56 E-value=0.00097 Score=48.99 Aligned_cols=80 Identities=19% Similarity=0.361 Sum_probs=60.8
Q ss_pred EEeeeCC---CCC---cccchhHHHHHHH-HHhhCCCCcEEEEcCCChhhHH-HHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 31 VMTVEPG---FGG---QKFMPEMMDKVRS-LRNRYPSLDIEVDGGLGPSTIA-EAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 31 vm~v~pG---~~g---q~~~~~~~~ki~~-l~~~~~~~~i~~dGGI~~~ni~-~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
++.++|- -+| +.+.++..+...+ +|+...+.++..-|||+..|.. .+.+.|+|++-+|+++.+++|+.+.++
T Consensus 137 iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 137 AVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp EEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHH
T ss_pred EEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHH
Confidence 4456663 255 6777775555444 4445557899999999976665 468999999999999999999999999
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
++.+.+.+
T Consensus 217 ~l~~~~~~ 224 (226)
T 1w0m_A 217 ELAKPLSE 224 (226)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98887765
No 112
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.55 E-value=0.00055 Score=52.46 Aligned_cols=97 Identities=13% Similarity=0.149 Sum_probs=64.0
Q ss_pred ceEEEecCC------CCHH---hHHHhHhCCCCCCEEEEEeeeCCCCCc--ccch-hHHHHHHHHHhhCCCCcEEEEcCC
Q 033598 2 RPGVALKPG------TSVE---EVYPLVEGANPVEMVLVMTVEPGFGGQ--KFMP-EMMDKVRSLRNRYPSLDIEVDGGL 69 (115)
Q Consensus 2 k~Glal~p~------t~~~---~~~~~~~~~~~vD~vlvm~v~pG~~gq--~~~~-~~~~ki~~l~~~~~~~~i~~dGGI 69 (115)
.+++=|+|. .+.+ .+...+++ .++|||-+..- ++..+ ...+ ..++.++++++.. ++|+.+.|||
T Consensus 211 pv~vris~~~~~~~g~~~~~~~~~a~~l~~-~Gvd~i~v~~~--~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi 286 (338)
T 1z41_A 211 PLFVRVSASDYTDKGLDIADHIGFAKWMKE-QGVDLIDCSSG--ALVHADINVFPGYQVSFAEKIREQA-DMATGAVGMI 286 (338)
T ss_dssp CEEEEEECCCCSTTSCCHHHHHHHHHHHHH-TTCCEEEEECC--CSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEECSSC
T ss_pred cEEEEecCcccCCCCCCHHHHHHHHHHHHH-cCCCEEEEecC--ccccCCCCCCccchHHHHHHHHHHC-CCCEEEECCC
Confidence 356666663 2333 23333433 57999987532 11122 1111 2345566776654 7999999999
Q ss_pred -ChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 70 -GPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 70 -~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
+.+.+.++++.| ||.+.+|++++..+|+-+.++
T Consensus 287 ~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~ 321 (338)
T 1z41_A 287 TDGSMAEEILQNGRADLIFIGRELLRDPFFARTAA 321 (338)
T ss_dssp CSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHH
T ss_pred CCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHH
Confidence 799999999999 999999999998888755443
No 113
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.54 E-value=0.00023 Score=54.27 Aligned_cols=93 Identities=23% Similarity=0.257 Sum_probs=60.5
Q ss_pred EEEecCCCCHHh---HHHhHhCCCCCCEEEEEeeeC---------------CCCCcccchhHHHHHHHHHhhCC-CCcEE
Q 033598 4 GVALKPGTSVEE---VYPLVEGANPVEMVLVMTVEP---------------GFGGQKFMPEMMDKVRSLRNRYP-SLDIE 64 (115)
Q Consensus 4 Glal~p~t~~~~---~~~~~~~~~~vD~vlvm~v~p---------------G~~gq~~~~~~~~ki~~l~~~~~-~~~i~ 64 (115)
.+=++++...+. +...+++ .++|+|.+-.... |++|....+..++.++++++..+ ++||.
T Consensus 215 ~vKi~~~~~~~~~~~~a~~l~~-~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi 293 (336)
T 1f76_A 215 AVKIAPDLSEEELIQVADSLVR-HNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPII 293 (336)
T ss_dssp EEECCSCCCHHHHHHHHHHHHH-TTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEE
T ss_pred EEEecCCCCHHHHHHHHHHHHH-cCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEE
Confidence 344555544333 2333433 5799998653211 12333333455677778877543 79999
Q ss_pred EEcCCC-hhhHHHHHHcCCCEEEEcccccC-CCCH
Q 033598 65 VDGGLG-PSTIAEAASAGANCIVAGSSVFG-APEP 97 (115)
Q Consensus 65 ~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~-~~d~ 97 (115)
+.|||+ .+.+.+++++|||.+-+|+++.. .++.
T Consensus 294 ~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~ 328 (336)
T 1f76_A 294 GVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPL 328 (336)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHH
T ss_pred EECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHH
Confidence 999995 89999999999999999999653 4443
No 114
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.53 E-value=0.0011 Score=51.16 Aligned_cols=97 Identities=11% Similarity=0.069 Sum_probs=63.8
Q ss_pred ceEEEecCCC------CHH---hHHHhHhCCCCCCEEEEEeeeCCCCCccc---chhHHHHHHHHHhhCCCCcEEEEcCC
Q 033598 2 RPGVALKPGT------SVE---EVYPLVEGANPVEMVLVMTVEPGFGGQKF---MPEMMDKVRSLRNRYPSLDIEVDGGL 69 (115)
Q Consensus 2 k~Glal~p~t------~~~---~~~~~~~~~~~vD~vlvm~v~pG~~gq~~---~~~~~~ki~~l~~~~~~~~i~~dGGI 69 (115)
.+|+=|+|.. +.+ .+...+++ .++|||-+.. .++..+.. ....++-++++++.. ++|+.+-|||
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI 286 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKE-QGVDLVDVSS--GAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGLI 286 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHH-TTCCEEEEEC--CCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSC
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHH-cCCCEEEEec--CCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCC
Confidence 3566677642 222 23333433 4799998743 22222211 112345566777665 7999999999
Q ss_pred -ChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 70 -GPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 70 -~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
+++.+.++++.| +|.+.+|++++..+|.-+.++
T Consensus 287 ~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~ 321 (340)
T 3gr7_A 287 TSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAA 321 (340)
T ss_dssp CCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHH
T ss_pred CCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHH
Confidence 599999999999 999999999998888755443
No 115
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.50 E-value=0.00026 Score=56.30 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=71.4
Q ss_pred EEEecCCCCHH---hHHHhHhCCCCCCEEEEEeee-------------CCCCCcccchhHHHHHHHHHhhCC-CCcEEEE
Q 033598 4 GVALKPGTSVE---EVYPLVEGANPVEMVLVMTVE-------------PGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVD 66 (115)
Q Consensus 4 Glal~p~t~~~---~~~~~~~~~~~vD~vlvm~v~-------------pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~d 66 (115)
.+=|.|+.+.+ .+...+++ .++|.|.+-... -|++|....+.+++-+.++++... ++||.+.
T Consensus 273 ~VKi~pd~~~~~i~~iA~~a~~-aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~ 351 (415)
T 3i65_A 273 FVKLAPDLNQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 351 (415)
T ss_dssp EEEECSCCCHHHHHHHHHHHHH-HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEC
T ss_pred EEEecCCCCHHHHHHHHHHHHH-cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEE
Confidence 45566776643 33333433 479999765432 134566656777888999988754 6999999
Q ss_pred cCCC-hhhHHHHHHcCCCEEEEccccc-CCCCH-HHHHHHHHHHHHH
Q 033598 67 GGLG-PSTIAEAASAGANCIVAGSSVF-GAPEP-AHVISLMRKSVED 110 (115)
Q Consensus 67 GGI~-~~ni~~l~~~Gad~iv~Gsaif-~~~d~-~~~~~~l~~~~~~ 110 (115)
|||+ .+.+.+.+.+|||.+.+|++++ +.+.. .+..+.|++.+++
T Consensus 352 GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~ 398 (415)
T 3i65_A 352 GGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQ 398 (415)
T ss_dssp SSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9997 6788888899999999999975 32443 3344445554443
No 116
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=97.49 E-value=0.00035 Score=55.26 Aligned_cols=79 Identities=23% Similarity=0.299 Sum_probs=51.3
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCC--Cc---ccchhHHHHHHHHHhh--CCCCcEEEEcCC-ChhhHHHHHHcCCCE
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFG--GQ---KFMPEMMDKVRSLRNR--YPSLDIEVDGGL-GPSTIAEAASAGANC 84 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~--gq---~~~~~~~~ki~~l~~~--~~~~~i~~dGGI-~~~ni~~l~~~Gad~ 84 (115)
.+..+.+++ .++|+|.+ ...||-- .. .+....+..+.++++. ..++|+.++||| +.+++..++.+|||.
T Consensus 195 ~e~A~~a~~--aGAD~I~v-G~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~ 271 (400)
T 3ffs_A 195 EEATKELIE--NGADGIKV-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASS 271 (400)
T ss_dssp HHHHHHHHH--TTCSEEEE-CC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSE
T ss_pred HHHHHHHHH--cCCCEEEE-eCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCE
Confidence 444455442 58999987 4445421 11 1112234555555543 247999999999 599999999999999
Q ss_pred EEEcccccCC
Q 033598 85 IVAGSSVFGA 94 (115)
Q Consensus 85 iv~Gsaif~~ 94 (115)
+.+|+++...
T Consensus 272 V~vGt~f~~t 281 (400)
T 3ffs_A 272 VMIGSILAGT 281 (400)
T ss_dssp EEECGGGTTB
T ss_pred EEEChHHhcC
Confidence 9999998763
No 117
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.47 E-value=0.00085 Score=58.11 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccC-CCCH-HHHHHHHHHHHH
Q 033598 39 GGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFG-APEP-AHVISLMRKSVE 109 (115)
Q Consensus 39 ~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~-~~d~-~~~~~~l~~~~~ 109 (115)
.|....+..++.+.++++..+++||.+.||| |.+.+.+++.+|||.+.+|++++. ..+. .....+|+..+.
T Consensus 766 sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~ 839 (1025)
T 1gte_A 766 SGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLY 839 (1025)
T ss_dssp ESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHH
Confidence 3444444556778888877668999999999 789999999999999999999875 4443 455555665554
No 118
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.47 E-value=0.00089 Score=51.30 Aligned_cols=83 Identities=20% Similarity=0.248 Sum_probs=55.8
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCC--------CC-------cccchhHHHHHHHHHhhCCCCcEEEEcCCC-hh
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGF--------GG-------QKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PS 72 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~--------~g-------q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ 72 (115)
+....+....+.+ .++|+|.+-. +.|. .. ........+.|.++++..+++|+.++|||+ .+
T Consensus 188 ~~~~~~~a~~a~~--~Gad~I~v~~-~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~ 264 (349)
T 1p0k_A 188 FGMSKASAGKLYE--AGAAAVDIGG-YGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDAL 264 (349)
T ss_dssp SCCCHHHHHHHHH--HTCSEEEEEC----------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHH
T ss_pred CCCCHHHHHHHHH--cCCCEEEEcC-CCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHH
Confidence 3344555555541 4899998753 2221 11 112234556677777665679999999996 89
Q ss_pred hHHHHHHcCCCEEEEcccccCC
Q 033598 73 TIAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 73 ni~~l~~~Gad~iv~Gsaif~~ 94 (115)
.+..++.+|||.+.+|++++..
T Consensus 265 d~~k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 265 DVAKAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp HHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHHH
Confidence 9999889999999999997653
No 119
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=97.46 E-value=0.00045 Score=54.04 Aligned_cols=80 Identities=19% Similarity=0.292 Sum_probs=52.6
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCc-----ccchhHHHHHHHHHhh--CCCCcEEEEcCCC-hhhHHHHHHcCCC
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQ-----KFMPEMMDKVRSLRNR--YPSLDIEVDGGLG-PSTIAEAASAGAN 83 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq-----~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~-~~ni~~l~~~Gad 83 (115)
..+..+.+. + .++|+|.+ +..||.-.. .+....++.+..+++. ..++|+.++|||+ .+++..++.+|||
T Consensus 204 ~~~~a~~a~-~-~Gad~I~v-g~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd 280 (404)
T 1eep_A 204 TKEAALDLI-S-VGADCLKV-GIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGAD 280 (404)
T ss_dssp SHHHHHHHH-T-TTCSEEEE-CSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCS
T ss_pred cHHHHHHHH-h-cCCCEEEE-CCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCC
Confidence 355555555 2 58999998 666653100 0111123334444432 1379999999996 8999999999999
Q ss_pred EEEEcccccCC
Q 033598 84 CIVAGSSVFGA 94 (115)
Q Consensus 84 ~iv~Gsaif~~ 94 (115)
.+.+|+++..+
T Consensus 281 ~V~iG~~~l~~ 291 (404)
T 1eep_A 281 SVMIGNLFAGT 291 (404)
T ss_dssp EEEECHHHHTB
T ss_pred HHhhCHHHhcC
Confidence 99999998543
No 120
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.46 E-value=0.00061 Score=49.40 Aligned_cols=80 Identities=15% Similarity=0.227 Sum_probs=56.7
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.+++..+.+. + .++|++.+......+.+. ...++.++++++. .++|+.+.|||+ ++.+..+.++|||.+++|+
T Consensus 31 d~~~~a~~~~-~-~Gad~i~v~d~~~~~~~~---~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~ 104 (253)
T 1thf_D 31 DPVELGKFYS-E-IGIDELVFLDITASVEKR---KTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINT 104 (253)
T ss_dssp CHHHHHHHHH-H-TTCCEEEEEESSCSSSHH---HHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHH-H-cCCCEEEEECCchhhcCC---cccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 3445555554 2 589998876443333322 3445667777765 379999999998 5779999999999999999
Q ss_pred cccCCCC
Q 033598 90 SVFGAPE 96 (115)
Q Consensus 90 aif~~~d 96 (115)
+.+..++
T Consensus 105 ~~l~~p~ 111 (253)
T 1thf_D 105 AAVENPS 111 (253)
T ss_dssp HHHHCTH
T ss_pred HHHhChH
Confidence 9886553
No 121
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.45 E-value=0.00016 Score=53.48 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=50.8
Q ss_pred CHHhHHHhHhCCC-CC--CEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEE
Q 033598 12 SVEEVYPLVEGAN-PV--EMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVA 87 (115)
Q Consensus 12 ~~~~~~~~~~~~~-~v--D~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~ 87 (115)
+.+.++.+...+. .+ .+|-+.+ .| .. ...+.++++++...++|+.+-|||+ ++.++.+.+ |||.+|+
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~--~G---~~---~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIV 217 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY--SG---TY---GNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIV 217 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC--TT---SC---CCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC--CC---Cc---chHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEE
Confidence 4455666653312 12 5555443 33 22 2345577777765479999999998 599999989 9999999
Q ss_pred cccccCC
Q 033598 88 GSSVFGA 94 (115)
Q Consensus 88 Gsaif~~ 94 (115)
||++.+.
T Consensus 218 GSa~v~~ 224 (234)
T 2f6u_A 218 GNVIYEK 224 (234)
T ss_dssp CHHHHHH
T ss_pred ChHHHhC
Confidence 9999863
No 122
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.44 E-value=0.00065 Score=52.37 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=62.5
Q ss_pred eEEEecCC------CCHHh---HHHhHhCCCCCCEEEEEeeeCCCCCcc---c-chhHHHHHHHHHhhCCCCcEEEEcCC
Q 033598 3 PGVALKPG------TSVEE---VYPLVEGANPVEMVLVMTVEPGFGGQK---F-MPEMMDKVRSLRNRYPSLDIEVDGGL 69 (115)
Q Consensus 3 ~Glal~p~------t~~~~---~~~~~~~~~~vD~vlvm~v~pG~~gq~---~-~~~~~~ki~~l~~~~~~~~i~~dGGI 69 (115)
+|+=|+|. ...+. +...+++ .++|||-+.. .++..+. . ....++-++++++.. ++|+.+.|||
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi 297 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKE-LGVDLLDCSS--GGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLI 297 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHH-TTCCEEEEEC--CCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSC
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHH-cCCCEEEEec--CCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCC
Confidence 56667773 23332 2233333 4799998653 2222111 0 112344566666653 6999999999
Q ss_pred -ChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 70 -GPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 70 -~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
+++.+.++++.| +|.+.+|++++..+|+.+.+.
T Consensus 298 ~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~ 332 (349)
T 3hgj_A 298 TTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAA 332 (349)
T ss_dssp CCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred CCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHH
Confidence 699999999999 999999999998888754433
No 123
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=97.43 E-value=0.00021 Score=53.52 Aligned_cols=45 Identities=18% Similarity=0.386 Sum_probs=40.4
Q ss_pred EEEEcCCChh-----------hHHHHH-HcCCCEEEEcccccCCCCHHHHHHHHHHH
Q 033598 63 IEVDGGLGPS-----------TIAEAA-SAGANCIVAGSSVFGAPEPAHVISLMRKS 107 (115)
Q Consensus 63 i~~dGGI~~~-----------ni~~l~-~~Gad~iv~Gsaif~~~d~~~~~~~l~~~ 107 (115)
+.+.-||.+. |..+.. ++|+|.+|+|+.||+++||.++++++++.
T Consensus 193 ~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aGad~iVvGR~I~~a~dp~~a~~~~~~~ 249 (260)
T 3eww_A 193 LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKA 249 (260)
T ss_dssp EEEECSBCSSSEECTTSCEEBCHHHHHTTSCCSEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred EEECCCcCCCCCCCccCCCccCHHHHHHhcCCCEEEEChhhcCCCCHHHHHHHHHHH
Confidence 5678899875 688898 99999999999999999999999999875
No 124
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.43 E-value=0.00039 Score=52.77 Aligned_cols=70 Identities=17% Similarity=0.248 Sum_probs=48.8
Q ss_pred CCCCEEEEEeeeCCCCCcccc-hhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHH-cCCCEEEEcccccCCCCHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFM-PEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAAS-AGANCIVAGSSVFGAPEPAH 99 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~-~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~-~Gad~iv~Gsaif~~~d~~~ 99 (115)
.++|+|.+ +++...+.+. +..++.+.++++ ++|+.+.||| +.+.+..+++ .|||.+.+|++++..++.-.
T Consensus 152 ~G~d~i~v---~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~ 224 (318)
T 1vhn_A 152 EGVDEVFI---HTRTVVQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFK 224 (318)
T ss_dssp TTCCEEEE---ESSCTTTTTSSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHH
T ss_pred hCCCEEEE---cCCCccccCCCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHH
Confidence 57999976 4443222111 112233455544 7999999999 7899999887 79999999999887676543
No 125
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.42 E-value=0.00062 Score=54.49 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=68.2
Q ss_pred EEEecCCCCHHh---HHHhHhCCCCCCEEEEEeeeC-------------CCCCcccchhHHHHHHHHHhhCC-CCcEEEE
Q 033598 4 GVALKPGTSVEE---VYPLVEGANPVEMVLVMTVEP-------------GFGGQKFMPEMMDKVRSLRNRYP-SLDIEVD 66 (115)
Q Consensus 4 Glal~p~t~~~~---~~~~~~~~~~vD~vlvm~v~p-------------G~~gq~~~~~~~~ki~~l~~~~~-~~~i~~d 66 (115)
.+=+.|+...+. +...+++ .++|.|.+-.... |++|....+..++-++++++... ++||.+.
T Consensus 301 ~vKispd~~~ed~~~iA~~~~~-aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~ 379 (443)
T 1tv5_A 301 FVKLAPDLNQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 379 (443)
T ss_dssp EEEECSCCCHHHHHHHHHHHHH-TTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE
Confidence 455667654333 3444444 5799997654311 22333333456777888887653 7999999
Q ss_pred cCC-ChhhHHHHHHcCCCEEEEccc-ccCCCCHH-HHHHHHHHHHHH
Q 033598 67 GGL-GPSTIAEAASAGANCIVAGSS-VFGAPEPA-HVISLMRKSVED 110 (115)
Q Consensus 67 GGI-~~~ni~~l~~~Gad~iv~Gsa-if~~~d~~-~~~~~l~~~~~~ 110 (115)
||| +.+.+.+.+.+|||.+-+|++ +++.+..- +..+.+.+.++.
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~ 426 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQ 426 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHH
Confidence 998 588899999999999999999 44455443 333344444443
No 126
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.42 E-value=0.00066 Score=54.68 Aligned_cols=79 Identities=24% Similarity=0.359 Sum_probs=52.8
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCC--Cc---ccchhHHHHHHHHHhhC--CCCcEEEEcCC-ChhhHHHHHHcCCCE
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFG--GQ---KFMPEMMDKVRSLRNRY--PSLDIEVDGGL-GPSTIAEAASAGANC 84 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~--gq---~~~~~~~~ki~~l~~~~--~~~~i~~dGGI-~~~ni~~l~~~Gad~ 84 (115)
.+..+.+++ .++|+|.+ +..||.. +. .+....+..+.++++.. .++|+.++||| +.+++..++.+|||.
T Consensus 281 ~e~a~~l~~--aGaD~I~v-g~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~ 357 (490)
T 4avf_A 281 AEAAKALAE--AGADAVKV-GIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYC 357 (490)
T ss_dssp HHHHHHHHH--TTCSEEEE-CSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHH--cCCCEEEE-CCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCe
Confidence 344444442 58999987 3344431 10 11122444455555431 37999999999 899999999999999
Q ss_pred EEEcccccCC
Q 033598 85 IVAGSSVFGA 94 (115)
Q Consensus 85 iv~Gsaif~~ 94 (115)
+.+||++...
T Consensus 358 V~vGs~~~~~ 367 (490)
T 4avf_A 358 VMMGSMFAGT 367 (490)
T ss_dssp EEECTTTTTB
T ss_pred eeecHHHhcC
Confidence 9999998763
No 127
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=97.41 E-value=0.0013 Score=51.04 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=54.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
.++|||-+... .+.+.... ..+.++++++.. ++|+.+.|||+.+++.++++.| ||.+.+|++++..+++.+.++
T Consensus 262 ~G~d~i~v~~~--~~~~~~~~--~~~~~~~i~~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~ 336 (365)
T 2gou_A 262 HRIVYLHIAEV--DWDDAPDT--PVSFKRALREAY-QGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLR 336 (365)
T ss_dssp TTCSEEEEECC--BTTBCCCC--CHHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHH
T ss_pred cCCCEEEEeCC--CcCCCCCc--cHHHHHHHHHHC-CCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHH
Confidence 57999986542 12221111 124466677665 6899999999999999999998 999999999988888765543
No 128
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.38 E-value=0.00063 Score=51.69 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhCC-CCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCC
Q 033598 47 MMDKVRSLRNRYP-SLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 47 ~~~ki~~l~~~~~-~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~ 94 (115)
..+.++++++... ++|+.+-|||+ .+.+..+.++|||.+++||++.+.
T Consensus 213 ~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 213 PPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 3455666666643 79999999995 789999999999999999999875
No 129
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.37 E-value=0.0022 Score=47.02 Aligned_cols=76 Identities=21% Similarity=0.308 Sum_probs=57.8
Q ss_pred EEeeeCC---CCC---cccchhHHHHHHH-HHhhCCCCcEEEEcCCChhhHH-HHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 31 VMTVEPG---FGG---QKFMPEMMDKVRS-LRNRYPSLDIEVDGGLGPSTIA-EAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 31 vm~v~pG---~~g---q~~~~~~~~ki~~-l~~~~~~~~i~~dGGI~~~ni~-~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
++.++|- -+| +.+.++..+...+ +|+..++.++..-|||+..|.. .+.+.|+|++-+|+++.+++|+.+.++
T Consensus 140 iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~ 219 (225)
T 1hg3_A 140 YVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIW 219 (225)
T ss_dssp EEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHH
T ss_pred EEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHH
Confidence 4456664 255 6787775555444 4445557899999999976665 468999999999999999999999988
Q ss_pred HHHH
Q 033598 103 LMRK 106 (115)
Q Consensus 103 ~l~~ 106 (115)
++.+
T Consensus 220 ~l~~ 223 (225)
T 1hg3_A 220 DLVS 223 (225)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 130
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.36 E-value=0.0012 Score=51.57 Aligned_cols=80 Identities=8% Similarity=0.066 Sum_probs=54.4
Q ss_pred HhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCC
Q 033598 18 PLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPE 96 (115)
Q Consensus 18 ~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d 96 (115)
..+++ .++|||-+..- .+. +......++.++++++.. ++|+.+-|||+.+.+.++++.| +|.+.+|++++..++
T Consensus 262 ~~le~-~Gvd~i~v~~~--~~~-~~~~~~~~~~~~~ik~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~ 336 (377)
T 2r14_A 262 GELDR-RGLAYLHFNEP--DWI-GGDITYPEGFREQMRQRF-KGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPD 336 (377)
T ss_dssp HHHHH-TTCSEEEEECC--C-------CCCTTHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHH-cCCCEEEEeCC--ccc-CCCCcchHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCch
Confidence 33433 57999986431 111 100000233456666664 6899999999999999999998 999999999998888
Q ss_pred HHHHHH
Q 033598 97 PAHVIS 102 (115)
Q Consensus 97 ~~~~~~ 102 (115)
+-+.++
T Consensus 337 l~~k~~ 342 (377)
T 2r14_A 337 LPERFR 342 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 131
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.35 E-value=0.00087 Score=54.75 Aligned_cols=80 Identities=11% Similarity=0.121 Sum_probs=59.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh------------hhHHHHH
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP------------STIAEAA 78 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~------------~ni~~l~ 78 (115)
.|++..+.|.+ .++|.+.+.-......+..-....++.|+++++.. .+|+.+.|||+. +++..+.
T Consensus 281 dp~~~A~~~~~--~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 281 KPVQLAQKYYQ--QGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHHHHH--TTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred CHHHHHHHHHH--cCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 45666666652 47899988777765554433445677788887654 799999999987 6799999
Q ss_pred HcCCCEEEEcccccC
Q 033598 79 SAGANCIVAGSSVFG 93 (115)
Q Consensus 79 ~~Gad~iv~Gsaif~ 93 (115)
++|||.+++||+.++
T Consensus 358 ~aGad~V~igt~~~~ 372 (555)
T 1jvn_A 358 RSGADKVSIGTDAVY 372 (555)
T ss_dssp HHTCSEEEECHHHHH
T ss_pred HcCCCEEEECCHHhh
Confidence 999999999999875
No 132
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.34 E-value=0.0013 Score=51.09 Aligned_cols=78 Identities=15% Similarity=0.250 Sum_probs=53.9
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCC-ChhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGL-GPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gs 89 (115)
..+..+...+ .++|+|.+-+ +.|. .....+..++-+.++++..+ ++|+.++||| +.+++..++.+|||.+.+|+
T Consensus 235 ~~e~a~~a~~--~Gad~I~vs~-~ggr-~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 235 TAEDARLAVQ--HGAAGIIVSN-HGAR-QLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp SHHHHHHHHH--TTCSEEEECC-GGGT-SSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred CHHHHHHHHH--cCCCEEEECC-CCCc-cCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecH
Confidence 3455555442 5899998732 3331 11122346666777776543 7999999999 56699999999999999999
Q ss_pred cccC
Q 033598 90 SVFG 93 (115)
Q Consensus 90 aif~ 93 (115)
+++.
T Consensus 311 ~~l~ 314 (370)
T 1gox_A 311 PVVF 314 (370)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 133
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=97.33 E-value=0.00049 Score=51.34 Aligned_cols=110 Identities=17% Similarity=0.223 Sum_probs=68.5
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC-CCccc-------chhH----------------------HHHHHHH
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGF-GGQKF-------MPEM----------------------MDKVRSL 54 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~-~gq~~-------~~~~----------------------~~ki~~l 54 (115)
+.++|....+.++++++....-=+|+..+.+||. .-|.. .... .+.++.+
T Consensus 108 vTvh~~~G~~~l~~~~~~~~~gv~vL~~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at~~~e~~~i 187 (255)
T 3qw3_A 108 ITASPYMGSDSLQPFMRYPDKAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATDPVALARV 187 (255)
T ss_dssp EEECCTTCHHHHHHHHTCTTSEEEEEEECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSSCHHHHHHH
T ss_pred EEEcccCCHHHHHHHHHhhCCceEEEEeCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCCCHHHHHHH
Confidence 5678888888888888431111134444567761 11111 0000 2234455
Q ss_pred HhhCCCCcEEEEc-CCChhhHHHHHHcCCC------EEEEcccccCCCCHHHHHHHHHHHHHHHhhc
Q 033598 55 RNRYPSLDIEVDG-GLGPSTIAEAASAGAN------CIVAGSSVFGAPEPAHVISLMRKSVEDAQKN 114 (115)
Q Consensus 55 ~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad------~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~~ 114 (115)
|+..++.++.+=| |....+..+..++|+| ++|+|+.|.+++||.++++++++.+.+++++
T Consensus 188 r~~~~~~~~l~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~dp~~aa~~i~~~i~~~~~~ 254 (255)
T 3qw3_A 188 RARAPTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAIRFA 254 (255)
T ss_dssp HHHCSSCCEEECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCCCeEEECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCCHHHHHHHHHHHHHHHHhc
Confidence 5555555555434 3344488888889999 4999999999999999999999999887654
No 134
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.00041 Score=51.66 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=54.7
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+.|++..+.|.+ .++|.+-+.-.++ ...+-++++.+.. .+|+.+.|||+..++..+. +|||.+++||
T Consensus 38 ~dp~~~A~~~~~--~Ga~~l~vvDL~~---------~n~~~i~~i~~~~-~~pv~vgGGir~~~~~~~l-~Ga~~Viigs 104 (260)
T 2agk_A 38 HPSSYYAKLYKD--RDVQGCHVIKLGP---------NNDDAAREALQES-PQFLQVGGGINDTNCLEWL-KWASKVIVTS 104 (260)
T ss_dssp CCHHHHHHHHHH--TTCTTCEEEEESS---------SCHHHHHHHHHHS-TTTSEEESSCCTTTHHHHT-TTCSCEEECG
T ss_pred CCHHHHHHHHHH--cCCCEEEEEeCCC---------CCHHHHHHHHhcC-CceEEEeCCCCHHHHHHHh-cCCCEEEECc
Confidence 356776666663 4688887766664 2334466666654 5899999999998999999 9999999999
Q ss_pred cccCC
Q 033598 90 SVFGA 94 (115)
Q Consensus 90 aif~~ 94 (115)
+.++.
T Consensus 105 ~a~~~ 109 (260)
T 2agk_A 105 WLFTK 109 (260)
T ss_dssp GGBCT
T ss_pred HHHhh
Confidence 99975
No 135
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.31 E-value=0.002 Score=50.03 Aligned_cols=79 Identities=13% Similarity=0.198 Sum_probs=56.4
Q ss_pred HhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCC
Q 033598 18 PLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPE 96 (115)
Q Consensus 18 ~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d 96 (115)
..+++ .++|||-+..- ++.+.. +...+.++++++.. ++|+.+.|||+.+.+.++++.| +|.+.+|++++..++
T Consensus 258 ~~l~~-~G~d~i~v~~~--~~~~~~--~~~~~~~~~v~~~~-~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~ 331 (364)
T 1vyr_A 258 EELAK-RGIAYLHMSET--DLAGGK--PYSEAFRQKVRERF-HGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPD 331 (364)
T ss_dssp HHHHH-TTCSEEEEECC--BTTBCC--CCCHHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHH-hCCCEEEEecC--cccCCC--cccHHHHHHHHHHC-CCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChh
Confidence 33433 57999986531 121111 11234566777665 6899999999999999999998 999999999998888
Q ss_pred HHHHHH
Q 033598 97 PAHVIS 102 (115)
Q Consensus 97 ~~~~~~ 102 (115)
+.+.++
T Consensus 332 ~~~~~~ 337 (364)
T 1vyr_A 332 LVARLQ 337 (364)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765544
No 136
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.31 E-value=0.00022 Score=52.86 Aligned_cols=56 Identities=18% Similarity=0.291 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHH
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMR 105 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~ 105 (115)
..+.++++++...++|+.+-|||+ ++.++.+.+ |||.+|+||++.+. +.+.+++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~--~~~~~~~v~ 225 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYED--FDRALKTVA 225 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHC--HHHHHTHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhC--HHHHHHHHH
Confidence 345577777765478999999998 599999988 99999999999964 443444433
No 137
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.30 E-value=0.00042 Score=53.33 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=57.7
Q ss_pred CCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc-ccCCCCH-HHHHHHHHHHHHHH
Q 033598 38 FGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS-VFGAPEP-AHVISLMRKSVEDA 111 (115)
Q Consensus 38 ~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa-if~~~d~-~~~~~~l~~~~~~~ 111 (115)
++|....+..++-+.++++..+++||...|||. .+.+.+.+.+|||.+=++|+ +|+.+.. .+-.++|.+.+++.
T Consensus 255 lSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~~ 331 (354)
T 3tjx_A 255 LGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKK 331 (354)
T ss_dssp EEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHHHc
Confidence 556666777888888888877789999999995 77888888999999999998 5766665 45555577666653
No 138
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.29 E-value=0.0012 Score=52.92 Aligned_cols=89 Identities=11% Similarity=0.189 Sum_probs=64.1
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
..+|..|....+- .+.|+|++= +.++..-... ++...++.+.. ++.++.+-|||+ ++.+..+.++ +|.|
T Consensus 163 Evh~~eE~~~A~~---lga~iIGin--nr~L~t~~~d---l~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~av 233 (452)
T 1pii_A 163 EVSNEEEQERAIA---LGAKVVGIN--NRDLRDLSID---LNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGF 233 (452)
T ss_dssp EECSHHHHHHHHH---TTCSEEEEE--SEETTTTEEC---THHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEE
T ss_pred EeCCHHHHHHHHH---CCCCEEEEe--CCCCCCCCCC---HHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEE
Confidence 3455555444444 678988743 3454432222 34444554443 368899999998 8999999999 9999
Q ss_pred EEcccccCCCCHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMR 105 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~ 105 (115)
++|++|.+++|+.+.+++|.
T Consensus 234 LVGealmr~~d~~~~~~~l~ 253 (452)
T 1pii_A 234 LIGSALMAHDDLHAAVRRVL 253 (452)
T ss_dssp EECHHHHTCSCHHHHHHHHH
T ss_pred EEcHHHcCCcCHHHHHHHHH
Confidence 99999999999999998887
No 139
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.28 E-value=0.0012 Score=53.45 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=46.0
Q ss_pred CCCCEEEEEeeeCCCC--Cc---ccchhHHHHHHHHHhhC--CCCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccC
Q 033598 24 NPVEMVLVMTVEPGFG--GQ---KFMPEMMDKVRSLRNRY--PSLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~--gq---~~~~~~~~ki~~l~~~~--~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~ 93 (115)
.++|+|.+ ...||.- +. .+....+..+.++++.. .++|+.++||| +.+.+...+.+|||.+.+||++..
T Consensus 317 aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~ 393 (511)
T 3usb_A 317 AGANVVKV-GIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAG 393 (511)
T ss_dssp HTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred hCCCEEEE-CCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhc
Confidence 48999986 4555431 00 11122333344433221 26999999999 799999999999999999998754
No 140
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=97.27 E-value=0.00089 Score=52.86 Aligned_cols=66 Identities=26% Similarity=0.348 Sum_probs=46.9
Q ss_pred CCCEEEEEeeeC--CCCCcccchhHHHHHHHH-Hh-hCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 25 PVEMVLVMTVEP--GFGGQKFMPEMMDKVRSL-RN-RYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 25 ~vD~vlvm~v~p--G~~gq~~~~~~~~ki~~l-~~-~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
.+|.|.+-+..| | -..+..+++++. .+ -++++.|++.||||++++..+.+.|+|.|.+|+.+.+.+
T Consensus 236 ~~d~IrlDs~~~~~g-----d~~~~v~~v~~~ld~~G~~~~~I~aSggl~~~~i~~l~~~GvD~~gvGt~l~~~~ 305 (398)
T 2i1o_A 236 KVDYIRLDTPSSRRG-----NFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSISSAK 305 (398)
T ss_dssp CCCEEEECCCGGGCS-----CHHHHHHHHHHHHHHTTCTTSEEEEESSCCHHHHHHHHHTTCCEEEECHHHHTCC
T ss_pred CCcEEEeCCCCCCcc-----cHHHHHHHHHHHHHhCCCCceEEEEeCCCCHHHHHHHHHcCCCEEEeCcccCCCC
Confidence 688888776655 4 112232333222 11 135789999999999999999999999999999876543
No 141
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.24 E-value=0.0043 Score=48.51 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=55.8
Q ss_pred HhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCC
Q 033598 18 PLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPE 96 (115)
Q Consensus 18 ~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d 96 (115)
..+++ .++|||-+.. +++..+.+ +. + ++++++.. ++|+.+.|||+.+...++++.| +|.+.+|++++..++
T Consensus 273 ~~l~~-~Gvd~i~v~~--~~~~~~~~-~~--~-~~~ir~~~-~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~ 344 (379)
T 3aty_A 273 KKIEP-LSLAYLHYLR--GDMVNQQI-GD--V-VAWVRGSY-SGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPD 344 (379)
T ss_dssp HHHGG-GCCSEEEEEC--SCTTSCCC-CC--H-HHHHHTTC-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHH-hCCCEEEEcC--CCcCCCCc-cH--H-HHHHHHHC-CCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcH
Confidence 33433 4799997643 22222222 22 4 67777665 6899999999999999999988 999999999888888
Q ss_pred HHHHHH
Q 033598 97 PAHVIS 102 (115)
Q Consensus 97 ~~~~~~ 102 (115)
.-+.++
T Consensus 345 l~~k~~ 350 (379)
T 3aty_A 345 LVERAQ 350 (379)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 755443
No 142
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=97.24 E-value=0.0003 Score=54.87 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=45.2
Q ss_pred HHHHHhhCCCCcE-----EEEcCCChhhHHHH--HHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHhh
Q 033598 51 VRSLRNRYPSLDI-----EVDGGLGPSTIAEA--ASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQK 113 (115)
Q Consensus 51 i~~l~~~~~~~~i-----~~dGGI~~~ni~~l--~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~ 113 (115)
++.+|+..+++++ .+.||.-.+.+... .+.|+|++++|++|++++||.++++++++.+..+++
T Consensus 270 ~~~iR~~~~~~~iLtPGIGaqgGdq~rv~tp~~a~~~gadiIvVGR~I~~A~dp~~Aa~~i~~ei~~~l~ 339 (352)
T 2fds_A 270 MKIIRNKFPDSYILSPGIGAQNGDLYKTLKNGYNKDYEKLLINVGRAITKSPNPKKSSESYYNQIIQIFK 339 (352)
T ss_dssp HHHHHHHSTTCCEEECCC-----CHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEcCccccccCcHHHhhCHHhHhhcCceEEEECHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 4455555566666 77888776666665 578999999999999999999999999998876543
No 143
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.0012 Score=49.02 Aligned_cols=86 Identities=16% Similarity=0.077 Sum_probs=56.6
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC---CCcEEEEcCC-ChhhHHHHHHc--CCCEEEE
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP---SLDIEVDGGL-GPSTIAEAASA--GANCIVA 87 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~---~~~i~~dGGI-~~~ni~~l~~~--Gad~iv~ 87 (115)
+.++.+. ..++.+++..+......+.+ -++.++++++..+ ++|+.+-||+ +++.+..+.+. |++.+++
T Consensus 162 e~a~~~~---~~a~~il~t~i~~dG~~~G~---d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gviv 235 (260)
T 2agk_A 162 DTFRELR---KYTNEFLIHAADVEGLCGGI---DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTF 235 (260)
T ss_dssp HHHHHHT---TTCSEEEEEC-------CCC---CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHH---HhcCEEEEEeeccccCcCCC---CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEe
Confidence 5555554 34999998877653222223 3455666666543 7999999999 56999999987 9999999
Q ss_pred cccc--cCCC--CHHHHHHHHH
Q 033598 88 GSSV--FGAP--EPAHVISLMR 105 (115)
Q Consensus 88 Gsai--f~~~--d~~~~~~~l~ 105 (115)
||++ |..+ ++.+..+.++
T Consensus 236 g~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 236 GSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp CTTBGGGTCSSBCHHHHHHHHH
T ss_pred eCCHHHcCCCCCCHHHHHHHHH
Confidence 9996 6543 4556555544
No 144
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.21 E-value=0.0011 Score=48.85 Aligned_cols=86 Identities=10% Similarity=0.191 Sum_probs=58.6
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsai 91 (115)
.+.++.+. + .++.-+++..++-.-+.+-+..+. ++++++..+++|+.+.||++ .+.+..+ +.+++.+++||++
T Consensus 154 ~~~~~~~~-~-~g~~eil~t~Id~DGt~~G~d~~l---~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al 227 (243)
T 4gj1_A 154 MEVLDFYS-N-KGLKHILCTDISKDGTMQGVNVRL---YKLIHEIFPNICIQASGGVASLKDLENL-KGICSGVIVGKAL 227 (243)
T ss_dssp HHHHHHHH-T-TTCCEEEEEETTC-----CCCHHH---HHHHHHHCTTSEEEEESCCCSHHHHHHT-TTTCSEEEECHHH
T ss_pred HHHHHHHh-h-cCCcEEEeeeecccccccCCCHHH---HHHHHHhcCCCCEEEEcCCCCHHHHHHH-HccCchhehHHHH
Confidence 45555555 2 478888888887654555554444 55566666789999999995 7888887 5679999999999
Q ss_pred cCCC-CHHHHHHHH
Q 033598 92 FGAP-EPAHVISLM 104 (115)
Q Consensus 92 f~~~-d~~~~~~~l 104 (115)
+... +.+++.+.|
T Consensus 228 ~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 228 LDGVFSVEEGIRCL 241 (243)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HCCCCCHHHHHHHh
Confidence 8644 666665544
No 145
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.17 E-value=0.0016 Score=50.45 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=53.3
Q ss_pred CCCCEEEEEeeeCCCCCc-c--cch-hHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC-CCEEEEcccccCCCCH
Q 033598 24 NPVEMVLVMTVEPGFGGQ-K--FMP-EMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG-ANCIVAGSSVFGAPEP 97 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq-~--~~~-~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G-ad~iv~Gsaif~~~d~ 97 (115)
.++|||-+..- ++... . ..+ ..++-++++++.. ++|+.+.||| +++.+.++++.| +|.+.+|++++..+|.
T Consensus 258 ~Gvd~i~vs~g--~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl 334 (363)
T 3l5l_A 258 GGLDLLSVSVG--FTIPDTNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHW 334 (363)
T ss_dssp TTCCEEEEEEC--CCSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTH
T ss_pred cCCCEEEEecC--ccccccccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchH
Confidence 47999987542 11111 0 111 2334456666554 6999999999 599999999999 9999999999988887
Q ss_pred HHHHH
Q 033598 98 AHVIS 102 (115)
Q Consensus 98 ~~~~~ 102 (115)
.+.++
T Consensus 335 ~~k~~ 339 (363)
T 3l5l_A 335 AYFAA 339 (363)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 146
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.16 E-value=0.0049 Score=46.91 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=54.6
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCC--------CC---------cccchhHHHHHHHHHhhCCCCcEEEEcCCC-
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGF--------GG---------QKFMPEMMDKVRSLRNRYPSLDIEVDGGLG- 70 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~--------~g---------q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~- 70 (115)
++...+....+. + .++|+|.+-. +.|. .. .......++-+.++++..+++|+.++|||.
T Consensus 191 ~g~~~e~a~~~~-~-~G~d~I~vs~-~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~ 267 (332)
T 1vcf_A 191 HGLSREAALALR-D-LPLAAVDVAG-AGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYT 267 (332)
T ss_dssp SCCCHHHHHHHT-T-SCCSEEECCC-BTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCS
T ss_pred CCCCHHHHHHHH-H-cCCCEEEeCC-CCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 345556555444 2 5899997632 2221 11 112334566677777765579999999994
Q ss_pred hhhHHHHHHcCCCEEEEccccc
Q 033598 71 PSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 71 ~~ni~~l~~~Gad~iv~Gsaif 92 (115)
.+.+...+..|||.+.+|++++
T Consensus 268 ~~d~~kal~~GAd~V~igr~~l 289 (332)
T 1vcf_A 268 GTDGAKALALGADLLAVARPLL 289 (332)
T ss_dssp HHHHHHHHHHTCSEEEECGGGH
T ss_pred HHHHHHHHHhCCChHhhhHHHH
Confidence 6788888889999999999865
No 147
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.14 E-value=0.00085 Score=48.39 Aligned_cols=77 Identities=14% Similarity=0.378 Sum_probs=56.4
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.+++..+.+.+ .++|++-+...+..|.+.. .. +.++++++.. ++|+.+.|||+ ++.+..+.++|||.+++|+
T Consensus 32 d~~~~a~~~~~--~Gad~i~v~~~d~~~~~~~---~~-~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQR--DGAEWIHLVDLDAAFGRGS---NH-ELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVNVGT 104 (244)
T ss_dssp EHHHHHHHHHH--TTCSEEEEEEHHHHTTSCC---CH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHH--cCCCEEEEEcCcccccCCC---hH-HHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEECc
Confidence 45566666552 4799999876554444322 12 5577777664 79999999998 5789999999999999999
Q ss_pred cccCC
Q 033598 90 SVFGA 94 (115)
Q Consensus 90 aif~~ 94 (115)
+.+..
T Consensus 105 ~~l~~ 109 (244)
T 2y88_A 105 AALEN 109 (244)
T ss_dssp HHHHC
T ss_pred hHhhC
Confidence 87753
No 148
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.13 E-value=0.0016 Score=46.95 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=47.9
Q ss_pred CCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccC
Q 033598 26 VEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFG 93 (115)
Q Consensus 26 vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~ 93 (115)
+|++|+-+-. |-+|+.|.-..+..+ .. ...|+...||+|++|+.+.+..++..+=+.|.+=.
T Consensus 118 ~d~~LlD~~~-gGtG~~fdW~~l~~~--~~---~~~p~~LAGGL~peNV~~ai~~~p~gVDvsSGvE~ 179 (203)
T 1v5x_A 118 AQALLLDGKR-PGSGEAYPRAWAKPL--LA---TGRRVILAGGIAPENLEEVLALRPYALDLASGVEE 179 (203)
T ss_dssp CSEEEEECSS-TTSCCCCCGGGGHHH--HH---TTSCEEECSSCCSTTHHHHHHHCCSEEEESGGGEE
T ss_pred CCEEEEcCCC-CCCCCccCHHHHHhh--hc---cCCcEEEECCCCHHHHHHHHhcCCCEEEeCCceec
Confidence 7999987643 668888876554432 11 25789999999999998766779999999999864
No 149
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.13 E-value=0.0012 Score=54.52 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 48 MDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 48 ~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
++.++++++.. ++|+.+.||| +++++.++++.| +|.+.+|++++..+|+.+.++
T Consensus 269 ~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 324 (671)
T 1ps9_A 269 SWVTRKLKGHV-SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQ 324 (671)
T ss_dssp HHHHHHHTTSC-SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHHHhc-CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHH
Confidence 45567777654 7999999999 899999999998 999999999998888755443
No 150
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.12 E-value=0.0018 Score=52.86 Aligned_cols=86 Identities=9% Similarity=0.115 Sum_probs=60.0
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHH-cCCCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAAS-AGANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~-~Gad~iv~Gsa 90 (115)
++..+.+. + .++|.|++..+...-..+.+ .++.++++++.. ++|+.+.||| +++.+..+.+ .|+|.+++||+
T Consensus 455 ~e~a~~~~-~-~Ga~~il~t~~~~dG~~~G~---d~~li~~l~~~~-~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a 528 (555)
T 1jvn_A 455 WELTRACE-A-LGAGEILLNCIDKDGSNSGY---DLELIEHVKDAV-KIPVIASSGAGVPEHFEEAFLKTRADACLGAGM 528 (555)
T ss_dssp HHHHHHHH-H-TTCCEEEECCGGGTTTCSCC---CHHHHHHHHHHC-SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHH
T ss_pred HHHHHHHH-H-cCCCEEEEeCCCCCCCCCCC---CHHHHHHHHHhC-CccEEEECCCCCHHHHHHHHHhcCChHHHHHHH
Confidence 45555544 2 57999987666543222223 355667776653 7999999999 7899999987 89999999999
Q ss_pred ccCCC-CHHHHHHHH
Q 033598 91 VFGAP-EPAHVISLM 104 (115)
Q Consensus 91 if~~~-d~~~~~~~l 104 (115)
++..+ +..+..+.+
T Consensus 529 ~~~~~~~~~e~~~~l 543 (555)
T 1jvn_A 529 FHRGEFTVNDVKEYL 543 (555)
T ss_dssp HHTTSCCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 88765 444444433
No 151
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.08 E-value=0.00088 Score=48.45 Aligned_cols=77 Identities=16% Similarity=0.346 Sum_probs=55.4
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.+++..+.+.+ .++|++.+...+..|.+... . +.++++++.. ++|+.+.|||+ ++.+..+.++|||.+++|+
T Consensus 33 d~~~~a~~~~~--~Gad~i~v~~~d~~~~~~~~---~-~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQR--SGAEWLHLVDLDAAFGTGDN---R-ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHH--TTCSEEEEEEHHHHHTSCCC---H-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHH--cCCCEEEEecCchhhcCCCh---H-HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEEEECc
Confidence 45555565552 58999988754444433321 2 5577777664 79999999998 5779999999999999999
Q ss_pred cccCC
Q 033598 90 SVFGA 94 (115)
Q Consensus 90 aif~~ 94 (115)
..+..
T Consensus 106 ~~l~~ 110 (244)
T 1vzw_A 106 AALET 110 (244)
T ss_dssp HHHHC
T ss_pred hHhhC
Confidence 87753
No 152
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.05 E-value=0.0017 Score=47.38 Aligned_cols=76 Identities=24% Similarity=0.177 Sum_probs=53.9
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
++++..+.+.+ .++|.|.+. .+...+.... ..++.++++++.. ++|+.+.||++ .+.+..+.++|||.+++|+
T Consensus 31 ~~~~~a~~~~~--~Ga~~i~v~--d~~~~~~~~g-~~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~ 104 (266)
T 2w6r_A 31 LLRDWVVEVEK--RGAGEILLT--SIDRDGTKSG-YDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKALAAS 104 (266)
T ss_dssp EHHHHHHHHHH--HTCSEEEEE--ETTTSSCSSC-CCHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEEECCC
T ss_pred CHHHHHHHHHH--CCCCEEEEE--ecCcccCCCc-ccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHhhhhH
Confidence 45566666652 479999984 4433222111 2356677777764 79999999987 4888899999999999999
Q ss_pred ccc
Q 033598 90 SVF 92 (115)
Q Consensus 90 aif 92 (115)
+.+
T Consensus 105 ~~~ 107 (266)
T 2w6r_A 105 VFH 107 (266)
T ss_dssp CC-
T ss_pred HHH
Confidence 988
No 153
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.02 E-value=0.011 Score=45.71 Aligned_cols=78 Identities=23% Similarity=0.288 Sum_probs=50.4
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCC--c---ccc---hhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCC
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGG--Q---KFM---PEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGA 82 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~g--q---~~~---~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Ga 82 (115)
..+..+.+.+ .++|+|.+ +..||+.. . .+. ...+..+.+..+. .++|+.++|||. ...+...+.+||
T Consensus 171 t~e~A~~a~~--aGaD~I~v-~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~-~~ipvIa~GGI~~g~di~kAlalGA 246 (351)
T 2c6q_A 171 TGEMVEELIL--SGADIIKV-GIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG-LKGHIISDGGCSCPGDVAKAFGAGA 246 (351)
T ss_dssp SHHHHHHHHH--TTCSEEEE-CSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH-TTCEEEEESCCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHH--hCCCEEEE-CCCCCcCcCccccCCCCccHHHHHHHHHHHHhh-cCCcEEEeCCCCCHHHHHHHHHcCC
Confidence 3444444442 68999966 45665311 0 011 1222333333322 369999999998 889999999999
Q ss_pred CEEEEcccccC
Q 033598 83 NCIVAGSSVFG 93 (115)
Q Consensus 83 d~iv~Gsaif~ 93 (115)
|.+.+|+.+..
T Consensus 247 ~~V~vG~~fl~ 257 (351)
T 2c6q_A 247 DFVMLGGMLAG 257 (351)
T ss_dssp SEEEESTTTTT
T ss_pred CceeccHHHhc
Confidence 99999998763
No 154
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.97 E-value=0.0039 Score=48.53 Aligned_cols=75 Identities=16% Similarity=0.289 Sum_probs=53.5
Q ss_pred HHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCC
Q 033598 16 VYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGA 94 (115)
Q Consensus 16 ~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~ 94 (115)
+...+++ .++|||-+.. |..+. .. ++++++.. +.|+.+.||++++...++++.| +|.+.+|++++..
T Consensus 255 la~~l~~-~Gvd~i~v~~---~~~~~----~~---~~~ik~~~-~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~lad 322 (361)
T 3gka_A 255 VARELGR-RRIAFLFARE---SFGGD----AI---GQQLKAAF-GGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIAN 322 (361)
T ss_dssp HHHHHHH-TTCSEEEEEC---CCSTT----CC---HHHHHHHH-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHH-cCCCEEEECC---CCCCH----HH---HHHHHHHc-CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhC
Confidence 3344444 4799997643 22222 22 34455443 5799999999999999999988 9999999999998
Q ss_pred CCHHHHHH
Q 033598 95 PEPAHVIS 102 (115)
Q Consensus 95 ~d~~~~~~ 102 (115)
+++...++
T Consensus 323 Pdl~~k~~ 330 (361)
T 3gka_A 323 PDLPRRFK 330 (361)
T ss_dssp TTHHHHHH
T ss_pred cHHHHHHH
Confidence 98755443
No 155
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.97 E-value=0.0028 Score=49.36 Aligned_cols=94 Identities=18% Similarity=0.355 Sum_probs=59.1
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
..+..+...+ .++|.|.+-. + |.......+..++-|.++++. ..++|+.++|||. .+.+...+.+|||.+.+|+
T Consensus 227 ~~e~A~~a~~--~GaD~I~vsn-~-GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 227 TKEDAELAMK--HNVQGIVVSN-H-GGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SHHHHHHHHH--TTCSEEEECC-G-GGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred cHHHHHHHHH--cCCCEEEEeC-C-CCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 3454444441 6899997532 2 322222335566667777554 3479999999995 6777788889999999998
Q ss_pred ccc-C-----CCCHHHHHHHHHHHHH
Q 033598 90 SVF-G-----APEPAHVISLMRKSVE 109 (115)
Q Consensus 90 aif-~-----~~d~~~~~~~l~~~~~ 109 (115)
+++ . .+...+.++.|++.++
T Consensus 303 ~~l~~l~~~G~~gv~~~l~~l~~el~ 328 (352)
T 3sgz_A 303 PILWGLACKGEDGVKEVLDILTAELH 328 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 854 2 1223345555555444
No 156
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.96 E-value=0.0043 Score=44.24 Aligned_cols=80 Identities=15% Similarity=0.238 Sum_probs=55.9
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
.+++.++.+. + .++|++.+-.....+. .....++.++++++.. ++|+.+.||++ ++.+..+.++|||.+.+++
T Consensus 34 ~~~~~a~~~~-~-~G~d~i~v~~~~~~~~---~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 34 DPVEMAVRYE-E-EGADEIAILDITAAPE---GRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp CHHHHHHHHH-H-TTCSCEEEEECCCCTT---THHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred cHHHHHHHHH-H-cCCCEEEEEeCCcccc---CCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 3445555554 2 5799988754332221 2234566677887764 79999999987 6788899999999999999
Q ss_pred cccCCCC
Q 033598 90 SVFGAPE 96 (115)
Q Consensus 90 aif~~~d 96 (115)
..+..++
T Consensus 108 ~~~~~~~ 114 (253)
T 1h5y_A 108 AAVRNPQ 114 (253)
T ss_dssp HHHHCTH
T ss_pred HHhhCcH
Confidence 8875443
No 157
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.89 E-value=0.0014 Score=47.24 Aligned_cols=63 Identities=22% Similarity=0.225 Sum_probs=48.1
Q ss_pred CCEEEEEeeeC--CCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccC
Q 033598 26 VEMVLVMTVEP--GFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFG 93 (115)
Q Consensus 26 vD~vlvm~v~p--G~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~ 93 (115)
+|++|+-+-.| |-+|+.|.-..+.. ++ ....|+...||+|++|+.+. ...++..+=+.|.+=.
T Consensus 120 ~d~~LlD~~~~~~GGtG~~fdw~~l~~---~~--~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~ 185 (205)
T 1nsj_A 120 EFPILLDTKTPEYGGSGKTFDWSLILP---YR--DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEA 185 (205)
T ss_dssp TSCEEEEESCSSSSSCCSCCCGGGTGG---GG--GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEE
T ss_pred CCEEEECCCCCCCCCCCCccCHHHHHh---hh--cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceec
Confidence 89999988665 67888887554322 11 12578999999999999875 4579999999999864
No 158
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.86 E-value=0.0047 Score=49.28 Aligned_cols=78 Identities=24% Similarity=0.251 Sum_probs=50.6
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCc-----ccchhHHHHHHHHHhh--CCCCcEEEEcCC-ChhhHHHHHHcCCC
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQ-----KFMPEMMDKVRSLRNR--YPSLDIEVDGGL-GPSTIAEAASAGAN 83 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq-----~~~~~~~~ki~~l~~~--~~~~~i~~dGGI-~~~ni~~l~~~Gad 83 (115)
..+..+.+.+ .++|+|.+ +..+|.... .+......-+.++++. ..++|+.++||| +.+.+..++.+|||
T Consensus 288 t~e~a~~l~~--~G~d~I~v-~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd 364 (494)
T 1vrd_A 288 TPEGTEALIK--AGADAVKV-GVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAE 364 (494)
T ss_dssp SHHHHHHHHH--TTCSEEEE-CSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred CHHHHHHHHH--cCCCEEEE-cCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCC
Confidence 3444455442 58999987 566652110 0111122333333332 137999999999 89999999999999
Q ss_pred EEEEccccc
Q 033598 84 CIVAGSSVF 92 (115)
Q Consensus 84 ~iv~Gsaif 92 (115)
.+.+|+++.
T Consensus 365 ~V~iGr~~l 373 (494)
T 1vrd_A 365 SVMVGSIFA 373 (494)
T ss_dssp EEEESHHHH
T ss_pred EEEECHHHh
Confidence 999999974
No 159
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=96.85 E-value=0.0016 Score=52.22 Aligned_cols=110 Identities=17% Similarity=0.215 Sum_probs=73.6
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC-CCccc-------chh----------------------HHHHHHHH
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGF-GGQKF-------MPE----------------------MMDKVRSL 54 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~-~gq~~-------~~~----------------------~~~ki~~l 54 (115)
+.++|....+.++++++.+..-=+|+..+.+|+. .=|.. ... ..+.++.+
T Consensus 109 vTvh~~~G~~~l~~~~~~~~~~v~vL~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~gat~~~e~~~i 188 (453)
T 3qw4_B 109 ITASPYMGSDSLQPFMRYPDKAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATDPVALARV 188 (453)
T ss_dssp EEECSTTCHHHHHHHHTCTTSEEEEEEECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECTTCHHHHHHH
T ss_pred EEEcccCCHHHHHHHHHhhCCcEEEEEeCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECCCCHHHHHHH
Confidence 6778888888999888432221144445567762 11110 000 12345556
Q ss_pred HhhCCCCcEEEEc-CCChhhHHHHHHcCCCE------EEEcccccCCCCHHHHHHHHHHHHHHHhhc
Q 033598 55 RNRYPSLDIEVDG-GLGPSTIAEAASAGANC------IVAGSSVFGAPEPAHVISLMRKSVEDAQKN 114 (115)
Q Consensus 55 ~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad~------iv~Gsaif~~~d~~~~~~~l~~~~~~~~~~ 114 (115)
|+..++.++.+=| |....+..+..++|+|. +++|+.|.+++||.++++++++.+++++++
T Consensus 189 r~~~~~~~~l~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~~~i~~~r~~ 255 (453)
T 3qw4_B 189 RARAPTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAIRFA 255 (453)
T ss_dssp HHHCSSCCEEECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCeEEECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCCCHHHHHHHHHHHHHHHHhc
Confidence 6555555565545 44445888888899998 999999999999999999999999877654
No 160
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=96.83 E-value=0.0027 Score=49.50 Aligned_cols=62 Identities=15% Similarity=0.360 Sum_probs=46.8
Q ss_pred HHHHHhhCCCCcEEEEcCCCh--hhHHHHHHcCCC------EEEEcccccCCCCHHHHHHHHHHHHHHHhh
Q 033598 51 VRSLRNRYPSLDIEVDGGLGP--STIAEAASAGAN------CIVAGSSVFGAPEPAHVISLMRKSVEDAQK 113 (115)
Q Consensus 51 i~~l~~~~~~~~i~~dGGI~~--~ni~~l~~~Gad------~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~ 113 (115)
++.+|+..+++++ +..||.. .+..++.+.|+| ++++|++|.+++||.++++++++.+..+++
T Consensus 280 l~~IR~~~~~~~i-LtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~~a~~ 349 (353)
T 2ffc_A 280 IKKIRELFPDCYI-LAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEVLA 349 (353)
T ss_dssp HHHHHHHCTTCCE-EECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeE-EeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 4455555555543 3555543 357788889998 999999999999999999999998887654
No 161
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.83 E-value=0.0067 Score=46.82 Aligned_cols=96 Identities=13% Similarity=0.164 Sum_probs=62.8
Q ss_pred ceEEEecCC------CCHH---hHHHhHhCCCCCCEEEEEeeeCCCCCcc---cchhHHHHHHHHHhhCCCCcEEEEcCC
Q 033598 2 RPGVALKPG------TSVE---EVYPLVEGANPVEMVLVMTVEPGFGGQK---FMPEMMDKVRSLRNRYPSLDIEVDGGL 69 (115)
Q Consensus 2 k~Glal~p~------t~~~---~~~~~~~~~~~vD~vlvm~v~pG~~gq~---~~~~~~~ki~~l~~~~~~~~i~~dGGI 69 (115)
.+|+=|+|. .+++ .+...+++ . +|||-+. ..++..++ .....++-++++++.. ++|+.+.|||
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~-~-vd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKD-K-VDLIDVS--SGGLLNVDINLYPGYQVKYAETIKKRC-NIKTSAVGLI 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTT-T-CSEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHH-TCEEEEESSC
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhc-c-ccEEecc--CCceEeeeecccCceeehHHHHHHHhc-Ccccceeeee
Confidence 456767774 2233 33444544 3 9999763 22222221 1112344456666654 6999999999
Q ss_pred C-hhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 70 G-PSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 70 ~-~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
+ ++.+.++++.| +|.+.+|++++..+|+-+.++
T Consensus 287 ~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 287 TTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp CCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 5 89999999988 999999999998888765543
No 162
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.79 E-value=0.0017 Score=46.96 Aligned_cols=81 Identities=19% Similarity=0.225 Sum_probs=57.3
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh-hhHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP-STIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~-~ni~~l~~~Gad~iv~G 88 (115)
..+++..+.+.+ .++|+|.+- ++..++.. ....++.+++++ . .++|+.+.|||+. +.+..+.++|||.+++|
T Consensus 30 ~~~~~~a~~~~~--~Gad~i~v~--d~~~~~~~-~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg 102 (241)
T 1qo2_A 30 KDPVELVEKLIE--EGFTLIHVV--DLSNAIEN-SGENLPVLEKLS-E-FAEHIQIGGGIRSLDYAEKLRKLGYRRQIVS 102 (241)
T ss_dssp SCHHHHHHHHHH--TTCCCEEEE--EHHHHHHC-CCTTHHHHHHGG-G-GGGGEEEESSCCSHHHHHHHHHTTCCEEEEC
T ss_pred cCHHHHHHHHHH--cCCCEEEEe--cccccccC-CchhHHHHHHHH-h-cCCcEEEECCCCCHHHHHHHHHCCCCEEEEC
Confidence 456677777662 579999873 33222111 123456677776 4 4799999999984 77888999999999999
Q ss_pred ccccCCCCH
Q 033598 89 SSVFGAPEP 97 (115)
Q Consensus 89 saif~~~d~ 97 (115)
++.+..++.
T Consensus 103 ~~~l~~p~~ 111 (241)
T 1qo2_A 103 SKVLEDPSF 111 (241)
T ss_dssp HHHHHCTTH
T ss_pred chHhhChHH
Confidence 998876664
No 163
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=96.79 E-value=0.0035 Score=47.58 Aligned_cols=84 Identities=13% Similarity=0.163 Sum_probs=60.4
Q ss_pred CCCCEEEEEeeeCCCC-------Cccc-chhHHHHHHHH----HhhCCCCcEEEEc-CC-ChhhHHHHHHc--CCCEEEE
Q 033598 24 NPVEMVLVMTVEPGFG-------GQKF-MPEMMDKVRSL----RNRYPSLDIEVDG-GL-GPSTIAEAASA--GANCIVA 87 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~-------gq~~-~~~~~~ki~~l----~~~~~~~~i~~dG-GI-~~~ni~~l~~~--Gad~iv~ 87 (115)
.++|+|. +|||.+ +... ..+..++++++ ++.+|++.+..-| || +++.+..+.+. |+|++..
T Consensus 182 agpDiI~---~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~g 258 (286)
T 2p10_A 182 AGADILV---CHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYG 258 (286)
T ss_dssp HTCSEEE---EECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCEEE---ECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEe
Confidence 5899995 788832 2121 22223444443 4567888777776 66 68999999998 9999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
+|++-+.+ +++++.++-+.++..
T Consensus 259 ASsier~p-~e~ai~~~~~~fk~~ 281 (286)
T 2p10_A 259 ASSMERLP-AEEAIRSQTLAFKAI 281 (286)
T ss_dssp SHHHHHHH-HHHHHHHHHHHHHTC
T ss_pred ehhhhcCC-HHHHHHHHHHHHHhc
Confidence 99999988 898888888777753
No 164
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.76 E-value=0.0058 Score=47.57 Aligned_cols=74 Identities=8% Similarity=0.144 Sum_probs=52.8
Q ss_pred HHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCC
Q 033598 17 YPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAP 95 (115)
Q Consensus 17 ~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~ 95 (115)
...+++ .++|||-+.. |..+. .. ++++++.. +.|+.+.||++++...++++.| +|.+.+|++++..+
T Consensus 248 a~~l~~-~Gvd~i~v~~---~~~~~----~~---~~~ik~~~-~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanP 315 (362)
T 4ab4_A 248 ARELGK-RGIAFICSRE---READD----SI---GPLIKEAF-GGPYIVNERFDKASANAALASGKADAVAFGVPFIANP 315 (362)
T ss_dssp HHHHHH-TTCSEEEEEC---CCCTT----CC---HHHHHHHH-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHH-hCCCEEEECC---CCCCH----HH---HHHHHHHC-CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCc
Confidence 334444 4799997643 22222 22 34444443 5799999999999999999988 99999999999888
Q ss_pred CHHHHHH
Q 033598 96 EPAHVIS 102 (115)
Q Consensus 96 d~~~~~~ 102 (115)
++...++
T Consensus 316 dl~~k~~ 322 (362)
T 4ab4_A 316 DLPARLA 322 (362)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 8755443
No 165
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=96.73 E-value=0.042 Score=37.76 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=60.8
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
+...+|.+.+...+.+ ..+|.|.+-+.... ..+...+-++++++.. +++++.+-|.+..+....+.+.|+|.+
T Consensus 52 lG~~~p~e~lv~aa~~-~~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v 125 (161)
T 2yxb_A 52 TGLRQTPEQVAMAAVQ-EDVDVIGVSILNGA-----HLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREI 125 (161)
T ss_dssp CCSBCCHHHHHHHHHH-TTCSEEEEEESSSC-----HHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEE
T ss_pred CCCCCCHHHHHHHHHh-cCCCEEEEEeechh-----hHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEE
Confidence 4456788877766644 68999987555442 2234444566676664 368888888888878888899999965
Q ss_pred EEcccccCCCCHHHHHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
... ..++.+.+..+++.++.
T Consensus 126 ~~~-----~~~~~~~~~~~~~~~~~ 145 (161)
T 2yxb_A 126 FLP-----GTSLGEIIEKVRKLAEE 145 (161)
T ss_dssp ECT-----TCCHHHHHHHHHHHHHH
T ss_pred ECC-----CCCHHHHHHHHHHHHHH
Confidence 321 23555666666665543
No 166
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.72 E-value=0.0017 Score=50.64 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=50.0
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEEEccc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsa 90 (115)
..+..+.+++ .++|.|.+. -+.|.. ....+..++-+.++++.. +.|+.++||| +.+++..++.+|||.+.+|++
T Consensus 235 t~e~a~~a~~--aGad~I~vs-~~gg~~-~d~~~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~ 309 (380)
T 1p4c_A 235 SAEDADRCIA--EGADGVILS-NHGGRQ-LDCAISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRA 309 (380)
T ss_dssp CHHHHHHHHH--TTCSEEEEC-CGGGTS-CTTCCCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHH
T ss_pred cHHHHHHHHH--cCCCEEEEc-CCCCCc-CCCCcCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHH
Confidence 3455555552 589999872 233210 011122344556665543 3599999999 566999999999999999998
Q ss_pred ccC
Q 033598 91 VFG 93 (115)
Q Consensus 91 if~ 93 (115)
++.
T Consensus 310 ~l~ 312 (380)
T 1p4c_A 310 TLY 312 (380)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 167
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.72 E-value=0.0066 Score=45.48 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=50.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~ 98 (115)
.+.+.|+|=.-+-. .|. ..++.-.++....| +..++.-+|| +++.+..+.++|+|.|.+|+++.+++|+.
T Consensus 172 ~~a~iIGINNRnL~----tf~-vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~ 243 (258)
T 4a29_A 172 IGARFIGIMSRDFE----TGE-INKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKI 243 (258)
T ss_dssp TTCSEEEECSBCTT----TCC-BCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHH
T ss_pred CCCcEEEEeCCCcc----ccc-cCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHH
Confidence 57888865444332 122 22344455555554 5778888999 68999999999999999999999998863
No 168
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=96.71 E-value=0.0026 Score=48.87 Aligned_cols=45 Identities=18% Similarity=0.386 Sum_probs=39.1
Q ss_pred EEEEcCCChh-----------hHHHHH-HcCCCEEEEcccccCCCCHHHHHHHHHHH
Q 033598 63 IEVDGGLGPS-----------TIAEAA-SAGANCIVAGSSVFGAPEPAHVISLMRKS 107 (115)
Q Consensus 63 i~~dGGI~~~-----------ni~~l~-~~Gad~iv~Gsaif~~~d~~~~~~~l~~~ 107 (115)
+.+.-||.+. +-.+.+ ++|+|.+|+|+.|++++||.++++++++.
T Consensus 245 l~vTPGIrp~~~~~~~g~qv~TP~~Ai~~~GaD~iVVGRpIt~A~dP~~aa~~i~~~ 301 (312)
T 3g3d_A 245 LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKA 301 (312)
T ss_dssp EEEECSBCSSSEECTTSCEEBCHHHHHHTTCCSEEEESHHHHTSSSHHHHHHHHHHH
T ss_pred EEEcCCcCCCcCCCCcCCcccCHHHHHHhCCCCEEEEChhhcCCCCHHHHHHHHHHH
Confidence 5677888774 366777 99999999999999999999999999875
No 169
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=96.70 E-value=0.016 Score=45.57 Aligned_cols=54 Identities=26% Similarity=0.340 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 48 MDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 48 ~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
++.++++++.. ++|+.+-|||+++.+.++++.| +|.+.+|++++..+++-+.++
T Consensus 308 ~~~~~~vk~~~-~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~ 362 (402)
T 2hsa_B 308 ARLMRTLRNAY-QGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIK 362 (402)
T ss_dssp HHHHHHHHHHC-SSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHHHHHH
Confidence 44566777665 6899999999999999999888 999999999998888765543
No 170
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.70 E-value=0.0089 Score=45.69 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=53.7
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCC--cc---cchh--HHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCC
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGG--QK---FMPE--MMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGA 82 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~g--q~---~~~~--~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Ga 82 (115)
+..+..+.+++ .++|+|.+ +.++|..- .. .... .++.+.++++.. ++|+.++|||. .+.+...+..||
T Consensus 158 ~s~e~A~~a~~--aGad~Ivv-s~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGA 233 (336)
T 1ypf_A 158 GTPEAVRELEN--AGADATKV-GIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGA 233 (336)
T ss_dssp CSHHHHHHHHH--HTCSEEEE-CSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTC
T ss_pred CCHHHHHHHHH--cCCCEEEE-ecCCCceeecccccCcCCchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCC
Confidence 34565555552 48999976 33454210 00 0000 456677777664 79999999996 678888889999
Q ss_pred CEEEEcccccC
Q 033598 83 NCIVAGSSVFG 93 (115)
Q Consensus 83 d~iv~Gsaif~ 93 (115)
|.+.+|++++.
T Consensus 234 daV~iGr~~l~ 244 (336)
T 1ypf_A 234 TMVMIGSLFAG 244 (336)
T ss_dssp SEEEESGGGTT
T ss_pred CEEEeChhhhc
Confidence 99999999873
No 171
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.69 E-value=0.0044 Score=45.44 Aligned_cols=61 Identities=21% Similarity=0.211 Sum_probs=40.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHH-HcCCCEEEEccccc
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVF 92 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif 92 (115)
..+|++|+-+ +|-+|+.|.-..++.+ .. +.|+...||+|++|+.+.+ ..++..+=+.|.+=
T Consensus 145 ~~~d~~LlDs--~GGtG~~fDW~~~~~~---~~---~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 145 YNADMVLLDT--GAGSGKLHDLRVSSLV---AR---KIPVIVAGGLNAENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp SCCSEEEEEC---------CCCHHHHHH---HH---HSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGE
T ss_pred cCCCEEccCC--CCCCcCcCChHHHHHh---hh---cCCeEEECCCCHHHHHHHHHHhCCCEEEeCCCCC
Confidence 4689999886 6778888876544333 22 3689999999999999865 47888888888874
No 172
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.68 E-value=0.0048 Score=47.95 Aligned_cols=77 Identities=14% Similarity=0.197 Sum_probs=49.9
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcc---cchhHHHHHHHHHhh-------CC--CCcEEEEcCC-ChhhHHHHH
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQK---FMPEMMDKVRSLRNR-------YP--SLDIEVDGGL-GPSTIAEAA 78 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~---~~~~~~~ki~~l~~~-------~~--~~~i~~dGGI-~~~ni~~l~ 78 (115)
..+..+.+++ .++|.|.+ +. -|.++.. +....++.+.++++. .. ++|+.++||| +.+.+...+
T Consensus 221 t~e~a~~~~~--~Gad~i~v-g~-Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kal 296 (393)
T 2qr6_A 221 DYTTALHMMR--TGAVGIIV-GG-GENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAI 296 (393)
T ss_dssp SHHHHHHHHT--TTCSEEEE-SC-CSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHH
T ss_pred CHHHHHHHHH--cCCCEEEE-CC-CcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHH
Confidence 3455555551 58999987 32 2222221 112344455444433 22 3999999999 588999999
Q ss_pred HcCCCEEEEccccc
Q 033598 79 SAGANCIVAGSSVF 92 (115)
Q Consensus 79 ~~Gad~iv~Gsaif 92 (115)
.+|||.+.+|+++.
T Consensus 297 alGA~~V~iG~~~l 310 (393)
T 2qr6_A 297 ACGADAVVLGSPLA 310 (393)
T ss_dssp HHTCSEEEECGGGG
T ss_pred HcCCCEEEECHHHH
Confidence 99999999999963
No 173
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.63 E-value=0.014 Score=43.63 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=52.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.|.+.++.+++ -++|.|| ..+++.-..+.++.|+++.+....+.|.+=||||.+|++.+.++|++-|=.++
T Consensus 129 d~~~ale~L~~--lG~~rIL------TSG~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 129 NPLYTLNNLAE--LGIARVL------TSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp CHHHHHHHHHH--HTCCEEE------ECTTSSSTTTTHHHHHHHHTSSSCCEEEEESSCCTTTHHHHHHHTCSEEEECC
T ss_pred CHHHHHHHHHH--cCCCEEE------CCCCCCCHHHHHHHHHHHHHhhCCcEEEecCCcCHHHHHHHHHcCCCeEeECC
Confidence 45666777661 2688887 22334445678888888876533678899999999999999999999987653
No 174
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.59 E-value=0.0059 Score=47.48 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=51.4
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
..+..+... + .++|+|.+- -+.| ......+..++-+.++++..+ ++|+.++|||. .+.+...+..|||.+.+|+
T Consensus 239 ~~e~a~~a~-~-~Gad~I~vs-~~gg-r~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 239 HPEDADMAI-K-RGASGIWVS-NHGA-RQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGR 314 (368)
T ss_dssp SHHHHHHHH-H-TTCSEEEEC-CGGG-TSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHH-H-cCCCEEEEc-CCCc-CCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 344444444 1 589999762 2222 111223456666777766433 69999999996 5677788889999999998
Q ss_pred ccc
Q 033598 90 SVF 92 (115)
Q Consensus 90 aif 92 (115)
.++
T Consensus 315 ~~l 317 (368)
T 2nli_A 315 PVL 317 (368)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 175
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.56 E-value=0.0099 Score=46.29 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=53.8
Q ss_pred HHHhHhCCCCCCEEEEEeeeCCCCC-cccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccC
Q 033598 16 VYPLVEGANPVEMVLVMTVEPGFGG-QKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFG 93 (115)
Q Consensus 16 ~~~~~~~~~~vD~vlvm~v~pG~~g-q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~ 93 (115)
+...+++ .++|||-+.. +.+.. .+.. ...+.++++++.. ++|+.+-|||+.+.+.++++.| +|.+.+|++++.
T Consensus 261 la~~le~-~Gvd~i~v~~--~~~~~~~~~~-~~~~~~~~vr~~~-~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 261 MVESLNK-YDLAYCHVVE--PRMKTAWEKI-ECTESLVPMRKAY-KGTFIVAGGYDREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HHHHHGG-GCCSEEEEEC--CSCCC-------CCCCSHHHHHHC-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHH-cCCCEEEEcC--CcccCCCCcc-ccHHHHHHHHHHc-CCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHh
Confidence 3444444 4799997643 11110 0000 0112245555554 6899999999999999999888 999999999998
Q ss_pred CCCHHHHHH
Q 033598 94 APEPAHVIS 102 (115)
Q Consensus 94 ~~d~~~~~~ 102 (115)
.+++-+.++
T Consensus 336 ~P~l~~k~~ 344 (376)
T 1icp_A 336 NPDLPKRFE 344 (376)
T ss_dssp CTTHHHHHH
T ss_pred CccHHHHHH
Confidence 888755543
No 176
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.55 E-value=0.0082 Score=44.08 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=52.0
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCccc--chhHHHHHHHHHhh-CCCCcEEEEcCCChhhHHHHH-HcCCCEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKF--MPEMMDKVRSLRNR-YPSLDIEVDGGLGPSTIAEAA-SAGANCI 85 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~--~~~~~~ki~~l~~~-~~~~~i~~dGGI~~~ni~~l~-~~Gad~i 85 (115)
..|.+.++.+++ -++|.|| .-+++.- ..+.++.|+++.+. ...+.|.+=||||.+|++.+. ++|++-|
T Consensus 133 ~d~~~ale~L~~--lGv~rIL------TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~ 204 (224)
T 2bdq_A 133 SDQKKSIDQLVA--LGFTRIL------LHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVKQA 204 (224)
T ss_dssp TTHHHHHHHHHH--TTCCEEE------ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCTTTHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHH--cCCCEEE------CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHHHHhhCCCEE
Confidence 345667777762 3799987 2222223 56778888888664 345889999999999999997 6899988
Q ss_pred EEcccccCCCCHHH
Q 033598 86 VAGSSVFGAPEPAH 99 (115)
Q Consensus 86 v~Gsaif~~~d~~~ 99 (115)
=..+-+....||.+
T Consensus 205 H~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 205 HGTRITQMAGDPLE 218 (224)
T ss_dssp EETTCC--------
T ss_pred ccccccCCCCCcch
Confidence 65433444556643
No 177
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.55 E-value=0.0096 Score=47.98 Aligned_cols=78 Identities=26% Similarity=0.341 Sum_probs=49.4
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCc-----ccchhHHHHHHHHHhhC--CCCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQ-----KFMPEMMDKVRSLRNRY--PSLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq-----~~~~~~~~ki~~l~~~~--~~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
+..+.+++ .++|+|.+. ..||.... .+....+..+.++.+.. .++|+.++||| +.+.+..++.+|||.+
T Consensus 284 e~a~~l~~--aGaD~I~Vg-~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V 360 (496)
T 4fxs_A 284 EGARALIE--AGVSAVKVG-IGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCV 360 (496)
T ss_dssp HHHHHHHH--HTCSEEEEC-SSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHH--hCCCEEEEC-CCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeE
Confidence 44444441 489999753 23443210 01112333344444321 26999999999 5899999999999999
Q ss_pred EEcccccCC
Q 033598 86 VAGSSVFGA 94 (115)
Q Consensus 86 v~Gsaif~~ 94 (115)
.+||++...
T Consensus 361 ~iGs~f~~t 369 (496)
T 4fxs_A 361 MVGSMFAGT 369 (496)
T ss_dssp EESTTTTTB
T ss_pred EecHHHhcC
Confidence 999997653
No 178
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.50 E-value=0.02 Score=46.06 Aligned_cols=79 Identities=24% Similarity=0.357 Sum_probs=60.7
Q ss_pred ceEEEecCC-CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPG-TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~-t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
++|.++... ...+.++.+++ .++|.|-+-+.+| .....++.++++++.++++|+.+-+..+.+.+..+.++
T Consensus 221 ~v~aavG~~~d~~~~a~~l~~--aG~d~I~id~a~g------~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~a 292 (496)
T 4fxs_A 221 RVGAAVGAAPGNEERVKALVE--AGVDVLLIDSSHG------HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA 292 (496)
T ss_dssp CCEEECCSSSCCHHHHHHHHH--TTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHH
T ss_pred eeeeeeccccchHHHHHHHHh--ccCceEEeccccc------cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHh
Confidence 356677653 45677777773 4899987665553 22456677889988888899988668899999999999
Q ss_pred CCCEEEEc
Q 033598 81 GANCIVAG 88 (115)
Q Consensus 81 Gad~iv~G 88 (115)
|||.+++|
T Consensus 293 GaD~I~Vg 300 (496)
T 4fxs_A 293 GVSAVKVG 300 (496)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999986
No 179
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.41 E-value=0.0081 Score=46.87 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=51.1
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCC--------------cccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHH
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGG--------------QKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIA 75 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~g--------------q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~ 75 (115)
...+..+.+.+ .++|+|.+-.- .|..- ..+...+...+.+++....++|+.++|||. ...+.
T Consensus 218 ~s~e~A~~l~~--aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~ 294 (365)
T 3sr7_A 218 MDVKTIQTAID--LGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDII 294 (365)
T ss_dssp CCHHHHHHHHH--HTCCEEECCCB-C--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHH
T ss_pred CCHHHHHHHHH--cCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHH
Confidence 44555555551 48999976432 33110 022223445556666655679999999995 67777
Q ss_pred HHHHcCCCEEEEccccc
Q 033598 76 EAASAGANCIVAGSSVF 92 (115)
Q Consensus 76 ~l~~~Gad~iv~Gsaif 92 (115)
..+.+|||.+.+|++++
T Consensus 295 KaLalGAdaV~ig~~~l 311 (365)
T 3sr7_A 295 KALVLGAKAVGLSRTML 311 (365)
T ss_dssp HHHHHTCSEEEESHHHH
T ss_pred HHHHcCCCEEEECHHHH
Confidence 88889999999999865
No 180
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=96.25 E-value=0.0082 Score=45.04 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=32.4
Q ss_pred hHHHHHHcCCCEEEEcccccC-CCCHHHHHHHHHHH
Q 033598 73 TIAEAASAGANCIVAGSSVFG-APEPAHVISLMRKS 107 (115)
Q Consensus 73 ni~~l~~~Gad~iv~Gsaif~-~~d~~~~~~~l~~~ 107 (115)
+-.+.+++|+|.+|+|+.|++ ++||.++++++++.
T Consensus 219 TP~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i~~~ 254 (267)
T 3gdm_A 219 TVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRKA 254 (267)
T ss_dssp EHHHHHHTTCSEEEECGGGTSTTCCHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEEChhhccCCCCHHHHHHHHHHH
Confidence 777888999999999999999 99999999999876
No 181
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=96.21 E-value=0.013 Score=45.89 Aligned_cols=78 Identities=15% Similarity=0.276 Sum_probs=52.3
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC-CCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLG-PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gs 89 (115)
..+..+.+.+ .++|+|.+-. +.| ......+..++-+.++++.. .++|+.++|||. .+.+...+..|||.+.+|+
T Consensus 262 ~~e~A~~a~~--aGad~I~vs~-~gg-r~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 262 RGDDAREAVK--HGLNGILVSN-HGA-RQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp CHHHHHHHHH--TTCCEEEECC-GGG-TSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHH--cCCCEEEeCC-CCC-CcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECH
Confidence 3555555442 5899998621 222 11123345666677776543 369999999996 5778888889999999998
Q ss_pred cccC
Q 033598 90 SVFG 93 (115)
Q Consensus 90 aif~ 93 (115)
+++.
T Consensus 338 ~~l~ 341 (392)
T 2nzl_A 338 PIVW 341 (392)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8553
No 182
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.19 E-value=0.033 Score=44.76 Aligned_cols=79 Identities=25% Similarity=0.381 Sum_probs=58.9
Q ss_pred ceEEEecCC-CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPG-TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~-t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
++|+++... ...+.++.+++ .++|+|.+-+.++ ..+...+.++++++.++++|+.+-...+.+.+..+.++
T Consensus 219 ~v~aavG~~~~~~~~a~~l~~--aG~d~I~id~a~g------~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~a 290 (490)
T 4avf_A 219 RVGAAVGTGADTGERVAALVA--AGVDVVVVDTAHG------HSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEA 290 (490)
T ss_dssp CCEEEECSSTTHHHHHHHHHH--TTCSEEEEECSCC------SBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT
T ss_pred eeeeeeccccchHHHHHHHhh--cccceEEecccCC------cchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHc
Confidence 356677665 34567777773 4799887654432 23456677888888887888888557899999999999
Q ss_pred CCCEEEEc
Q 033598 81 GANCIVAG 88 (115)
Q Consensus 81 Gad~iv~G 88 (115)
|||.+++|
T Consensus 291 GaD~I~vg 298 (490)
T 4avf_A 291 GADAVKVG 298 (490)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999985
No 183
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=96.17 E-value=0.006 Score=48.04 Aligned_cols=65 Identities=23% Similarity=0.308 Sum_probs=45.5
Q ss_pred CCCEEEEEeeeC--CCCCcccchhHHHHHHHH-Hh-hCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 25 PVEMVLVMTVEP--GFGGQKFMPEMMDKVRSL-RN-RYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 25 ~vD~vlvm~v~p--G~~gq~~~~~~~~ki~~l-~~-~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
.+|.|.+-+..| | -..+..+++++. .+ -+++..|++.||||++++..+.+. +|.|.+|+.+.+.+
T Consensus 234 ~~d~IrlDs~~~~~g-----d~~~~v~~~r~~ld~~G~~~~~I~aSggl~~~~i~~l~~~-vD~~gvGt~l~~~~ 302 (395)
T 2i14_A 234 KLFAVRLDTPSSRRG-----NFRKIIEEVRWELKVRGYDWVKIFVSGGLDEEKIKEIVDV-VDAFGVGGAIASAK 302 (395)
T ss_dssp GCCEEEECCCTTTCS-----CHHHHHHHHHHHHHHTTCCSCEEEEESSCCHHHHHTTGGG-CSEEEECHHHHTCC
T ss_pred CCcEEEeCCCCCCcc-----cHHHHHHHHHHHHHhCCCCceEEEEECCCCHHHHHHHHHh-CCEEEeCcccCCCC
Confidence 578888776655 4 112233333322 12 135789999999999999999999 99999999876543
No 184
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.08 E-value=0.03 Score=44.43 Aligned_cols=69 Identities=25% Similarity=0.285 Sum_probs=45.5
Q ss_pred CCCCEEEEEeeeCCCCCc-----ccchhHHHHHHHHHhh--CCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccC
Q 033598 24 NPVEMVLVMTVEPGFGGQ-----KFMPEMMDKVRSLRNR--YPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq-----~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~ 93 (115)
.++|.|.+ +..||.-.. .+....++-+.++... ..++|+.++|||+ .+.+..+..+|||.+++|+++..
T Consensus 294 ~Gad~I~v-g~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 294 AGVDVVKV-GIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAG 370 (491)
T ss_dssp TTCSEEEE-CSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cCCCEEEE-CccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhC
Confidence 58999976 444442100 0111233344444431 1369999999985 78899999999999999999864
No 185
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.98 E-value=0.024 Score=46.54 Aligned_cols=79 Identities=18% Similarity=0.300 Sum_probs=60.5
Q ss_pred ceEEEecCCCC-HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPGTS-VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~t~-~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
++|.|+..... .+..+.+++ .++|+|.|-+.+ | .....++.++.+++.+|+++|.+=.=.|.+....|.++
T Consensus 271 ~VgAAVgv~~d~~eR~~aLv~--AGvD~iviD~ah-G-----hs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~a 342 (556)
T 4af0_A 271 YCGAAIGTRPGDKDRLKLLAE--AGLDVVVLDSSQ-G-----NSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAA 342 (556)
T ss_dssp CCEEEECSSHHHHHHHHHHHH--TTCCEEEECCSC-C-----CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH
T ss_pred eeEEEeccCccHHHHHHHHHh--cCCcEEEEeccc-c-----ccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHc
Confidence 46777775533 456666663 589999875544 2 23356777888888899999988888899999999999
Q ss_pred CCCEEEEc
Q 033598 81 GANCIVAG 88 (115)
Q Consensus 81 Gad~iv~G 88 (115)
|||++-+|
T Consensus 343 GAD~vkVG 350 (556)
T 4af0_A 343 GADGLRIG 350 (556)
T ss_dssp TCSEEEEC
T ss_pred CCCEEeec
Confidence 99999988
No 186
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=95.97 E-value=0.015 Score=46.09 Aligned_cols=51 Identities=16% Similarity=0.319 Sum_probs=40.9
Q ss_pred HHHHHhhCC-CCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 51 VRSLRNRYP-SLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 51 i~~l~~~~~-~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
++++++... ++|+.+-||| +++.+.++++. +|.+.+|++++..+|+.+.++
T Consensus 308 a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~ 360 (419)
T 3l5a_A 308 NQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLA 360 (419)
T ss_dssp HHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHH
Confidence 455555433 5899999998 79999999999 999999999988888755443
No 187
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=95.92 E-value=0.049 Score=38.36 Aligned_cols=93 Identities=15% Similarity=0.094 Sum_probs=60.1
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh--hhHHHHHHcCCCE
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP--STIAEAASAGANC 84 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~--~ni~~l~~~Gad~ 84 (115)
+++.+..+.++.+.+ .++|++.+--.+..|. .+....++.++++++.. +.++.+++.++. +.++.+.++|+|.
T Consensus 13 ~D~~~~~~~~~~~~~--~G~~~i~~~~~dg~~~--~~~~~g~~~i~~i~~~~-~~~~~v~l~v~d~~~~i~~~~~~gad~ 87 (220)
T 2fli_A 13 ADYANFASELARIEE--TDAEYVHIDIMDGQFV--PNISFGADVVASMRKHS-KLVFDCHLMVVDPERYVEAFAQAGADI 87 (220)
T ss_dssp SCGGGHHHHHHHHHH--TTCCEEEEEEEBSSSS--SCBCBCHHHHHHHHTTC-CSEEEEEEESSSGGGGHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHH--cCCCEEEEEeecCCCC--CccccCHHHHHHHHHhC-CCCEEEEEeecCHHHHHHHHHHcCCCE
Confidence 444444455555551 4699987654332122 23333466677787764 688999999875 3689999999999
Q ss_pred EEEcccccCCCCHHHHHHHHHH
Q 033598 85 IVAGSSVFGAPEPAHVISLMRK 106 (115)
Q Consensus 85 iv~Gsaif~~~d~~~~~~~l~~ 106 (115)
+.+...-. +.+.+..+.+++
T Consensus 88 v~vh~~~~--~~~~~~~~~~~~ 107 (220)
T 2fli_A 88 MTIHTEST--RHIHGALQKIKA 107 (220)
T ss_dssp EEEEGGGC--SCHHHHHHHHHH
T ss_pred EEEccCcc--ccHHHHHHHHHH
Confidence 99986543 566666666654
No 188
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.81 E-value=0.067 Score=42.56 Aligned_cols=79 Identities=22% Similarity=0.395 Sum_probs=56.7
Q ss_pred eEEEecCCCC-HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPGTS-VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~t~-~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
+|..+.+..+ .+.++.+++ .++|.+.+-+. -| .....++.++++++..+++|+.+-++.+.+.+..+.++|
T Consensus 228 vga~ig~~~~~~~~a~~l~~--aGvd~v~i~~~-~G-----~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G 299 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVK--AGVDVIVIDTA-HG-----HSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAG 299 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHH--TTCSEEEECCS-CC-----SSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT
T ss_pred cccccCcCHhHHHHHHHHHH--hCCCEEEEEec-CC-----chHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC
Confidence 3445554333 345555552 47899876322 12 234577889999988778999998899999999999999
Q ss_pred CCEEEEcc
Q 033598 82 ANCIVAGS 89 (115)
Q Consensus 82 ad~iv~Gs 89 (115)
+|.++++.
T Consensus 300 ~d~I~v~~ 307 (494)
T 1vrd_A 300 ADAVKVGV 307 (494)
T ss_dssp CSEEEECS
T ss_pred CCEEEEcC
Confidence 99999953
No 189
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.75 E-value=0.082 Score=36.98 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=52.1
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCccc-chhHHHHHHHHHhhCCCCcEEEEcCCC--hhh-HHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKF-MPEMMDKVRSLRNRYPSLDIEVDGGLG--PST-IAE 76 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~-~~~~~~ki~~l~~~~~~~~i~~dGGI~--~~n-i~~ 76 (115)
||.=++++..+.-+.++-+..-.+.+|++.+.. ++ ....++-++++|+.++++|+.++=-+. .+. ++.
T Consensus 1 m~li~a~D~~~~~~~~~~~~~~~~~~diie~G~--------p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~ 72 (211)
T 3f4w_A 1 MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGT--------PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQL 72 (211)
T ss_dssp CEEEEEECSCCHHHHHHHHHHHGGGCSEEEECH--------HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHHHHHHhhcCccEEEeCc--------HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHH
Confidence 566677776554443332221014788876532 23 344566788888876778886654443 345 889
Q ss_pred HHHcCCCEEEEccc
Q 033598 77 AASAGANCIVAGSS 90 (115)
Q Consensus 77 l~~~Gad~iv~Gsa 90 (115)
+.++|||.+++...
T Consensus 73 ~~~~Gad~v~v~~~ 86 (211)
T 3f4w_A 73 LFDAGADYVTVLGV 86 (211)
T ss_dssp HHHTTCSEEEEETT
T ss_pred HHhcCCCEEEEeCC
Confidence 99999999999754
No 190
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.71 E-value=0.072 Score=43.01 Aligned_cols=79 Identities=25% Similarity=0.384 Sum_probs=59.7
Q ss_pred ceEEEecCC-CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc
Q 033598 2 RPGVALKPG-TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA 80 (115)
Q Consensus 2 k~Glal~p~-t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~ 80 (115)
.+|+++... ...+.++.+++ .++|.|.+-+.+|. ....++.++++++.+++.++.+-+-.+.+....+.++
T Consensus 246 ~V~aavg~~~d~~era~aLve--aGvd~I~Id~a~g~------~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~a 317 (511)
T 3usb_A 246 LVGAAVGVTADAMTRIDALVK--ASVDAIVLDTAHGH------SQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEA 317 (511)
T ss_dssp CCEEEECSSTTHHHHHHHHHH--TTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH
T ss_pred eeeeeeeeccchHHHHHHHHh--hccceEEecccccc------hhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHh
Confidence 356777654 33566666663 48999988766653 2346678899998888888887666789999999999
Q ss_pred CCCEEEEc
Q 033598 81 GANCIVAG 88 (115)
Q Consensus 81 Gad~iv~G 88 (115)
|||.+++|
T Consensus 318 Gad~i~vg 325 (511)
T 3usb_A 318 GANVVKVG 325 (511)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999985
No 191
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.61 E-value=0.11 Score=38.38 Aligned_cols=82 Identities=18% Similarity=0.219 Sum_probs=57.5
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh-hHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS-TIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~-ni~~l~~~Gad~iv~G 88 (115)
..|++..+.|.. .+++.|-+++-..-|.| ..+.++++++.. ++|+..-++|..+ .+.+...+|||.+.++
T Consensus 65 ~~p~~~A~~~~~--~GA~~isvlt~~~~f~G------~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 65 VDPVEAALAYAR--GGARAVSVLTEPHRFGG------SLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp CCHHHHHHHHHH--TTCSEEEEECCCSSSCC------CHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHH--cCCCEEEEecchhhhcc------CHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 455677777772 57999988654443444 334566776654 7999887776655 8899999999999999
Q ss_pred ccccCCCCHHHHH
Q 033598 89 SSVFGAPEPAHVI 101 (115)
Q Consensus 89 saif~~~d~~~~~ 101 (115)
.+.+. +...+.+
T Consensus 136 ~~~l~-~~l~~l~ 147 (254)
T 1vc4_A 136 VALLG-ELTGAYL 147 (254)
T ss_dssp HHHHG-GGHHHHH
T ss_pred ccchH-HHHHHHH
Confidence 88776 4444333
No 192
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=95.60 E-value=0.026 Score=43.78 Aligned_cols=62 Identities=16% Similarity=0.252 Sum_probs=41.3
Q ss_pred HHHHHhhCCCCcEEEEc-CCChhhHHHH------HHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHh
Q 033598 51 VRSLRNRYPSLDIEVDG-GLGPSTIAEA------ASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 51 i~~l~~~~~~~~i~~dG-GI~~~ni~~l------~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~ 112 (115)
++.+|+..+++++.+=| |-...+..++ .+.|+|.+++|+.|.+++||.++++++++.+.+.+
T Consensus 268 ~~~iR~~~p~~~iLtPGIGAQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A~dP~~Aa~~i~~ei~~~l 336 (342)
T 3n3m_A 268 MNYIRTYFPNCYILSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQKAAQMYYDQINAIL 336 (342)
T ss_dssp HHHHHHHSTTCCEEECCSSTTCCCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEeCCCCcCCCCHHHHHhhhhhhhcCceEEEcChhhhcCCCHHHHHHHHHHHHHHHH
Confidence 44445544566554422 2222333332 12588999999999999999999999999887654
No 193
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.53 E-value=0.092 Score=40.86 Aligned_cols=78 Identities=24% Similarity=0.370 Sum_probs=53.2
Q ss_pred eEEEecCC-CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPG-TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~-t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
+|+++... ...+.++.+++ .++|+|.+-+. .| ..+..++.++++++.++++++.+-...+.+.+..+.++|
T Consensus 99 vga~vg~~~~~~~~~~~lie--aGvd~I~idta-~G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aG 170 (366)
T 4fo4_A 99 VGAAVGAAPGNEERVKALVE--AGVDVLLIDSS-HG-----HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG 170 (366)
T ss_dssp CEEECCSCTTCHHHHHHHHH--TTCSEEEEECS-CT-----TSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT
T ss_pred EEEEeccChhHHHHHHHHHh--CCCCEEEEeCC-CC-----CCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcC
Confidence 45555432 22456666663 58998764321 22 123566778888888778877664468999999999999
Q ss_pred CCEEEEc
Q 033598 82 ANCIVAG 88 (115)
Q Consensus 82 ad~iv~G 88 (115)
||.+++|
T Consensus 171 AD~I~vG 177 (366)
T 4fo4_A 171 VSAVKVG 177 (366)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9999995
No 194
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=95.51 E-value=0.03 Score=43.58 Aligned_cols=44 Identities=20% Similarity=0.228 Sum_probs=35.8
Q ss_pred HHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccccc
Q 033598 49 DKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif 92 (115)
.-|.++++..+++|+.++|||. ...+...+.+|||.+-+|+.++
T Consensus 256 ~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 256 ASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp HHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 4456666666679999999976 6788888889999999998855
No 195
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.50 E-value=0.052 Score=43.94 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=49.1
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC------CCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY------PSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~------~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.+...... + .++|+|.+-. +.|. .-...+..++-+.++++.. .++||.++|||. .+.+...+.+|||.+
T Consensus 354 ~e~A~~a~-~-aGad~I~vs~-hgG~-~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAA-E-IGVSGVVLSN-HGGR-QLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHH-H-TTCSEEEECC-TTTT-SSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHH-H-cCCCEEEEcC-CCCc-cCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 44444444 2 5899998732 3332 1111233455555554432 479999999997 567777788999999
Q ss_pred EEccccc
Q 033598 86 VAGSSVF 92 (115)
Q Consensus 86 v~Gsaif 92 (115)
.+|+.++
T Consensus 430 ~iGr~~l 436 (511)
T 1kbi_A 430 GLGRPFL 436 (511)
T ss_dssp EECHHHH
T ss_pred EECHHHH
Confidence 9998854
No 196
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=95.46 E-value=0.033 Score=44.77 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=49.3
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCC--Cc---ccchhHHHHHHHHHhh--------CCCCcEEEEcCCC-hhhHHHHH
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFG--GQ---KFMPEMMDKVRSLRNR--------YPSLDIEVDGGLG-PSTIAEAA 78 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~--gq---~~~~~~~~ki~~l~~~--------~~~~~i~~dGGI~-~~ni~~l~ 78 (115)
.+..+.+++ .++|++.+ +..||.. .. .+....+.-+.++.+. ..++|+.+||||. ...+...+
T Consensus 295 ~~~a~~l~~--aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAl 371 (503)
T 1me8_A 295 GEGFRYLAD--AGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLAL 371 (503)
T ss_dssp HHHHHHHHH--HTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHH
T ss_pred HHHHHHHHH--hCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHH
Confidence 344444441 47999988 8888752 11 1111123333333221 1259999999997 66777888
Q ss_pred HcCCCEEEEccccc
Q 033598 79 SAGANCIVAGSSVF 92 (115)
Q Consensus 79 ~~Gad~iv~Gsaif 92 (115)
.+|||.+.+|+.+.
T Consensus 372 alGA~~V~iG~~~~ 385 (503)
T 1me8_A 372 AMGADFIMLGRYFA 385 (503)
T ss_dssp HTTCSEEEESHHHH
T ss_pred HcCCCEEEECchhh
Confidence 99999999999874
No 197
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.25 E-value=0.18 Score=39.22 Aligned_cols=67 Identities=22% Similarity=0.546 Sum_probs=48.9
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+.++.+++ .++|.|.+ +++.+ ......+.++++++..+++|+.+-+..+.+.+..+.++|+|.+++|
T Consensus 156 ~~a~~~~~--~G~d~i~i---~~~~g---~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 156 ERVEELVK--AHVDILVI---DSAHG---HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHH--TTCSEEEE---CCSCC---SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHH--CCCCEEEE---eCCCC---ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC
Confidence 44444442 57898865 33322 1245677788888887678998877788999999999999999994
No 198
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.19 E-value=0.058 Score=38.62 Aligned_cols=58 Identities=14% Similarity=0.412 Sum_probs=44.8
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc-ccCC
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS-VFGA 94 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa-if~~ 94 (115)
..|++-+| || ..|.. |+++++. .++|+.+-|+|+ .+.+....++||+.++.+.. +|+.
T Consensus 127 ~PD~iEiL---PG-----i~p~i---I~~i~~~-~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 127 QPDCIELL---PG-----IIPEQ---VQKMTQK-LHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp CCSEEEEE---CT-----TCHHH---HHHHHHH-HCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred CCCEEEEC---Cc-----hhHHH---HHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 57999887 77 33444 5555554 379999999996 67888899999999999955 8864
No 199
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.11 E-value=0.059 Score=43.17 Aligned_cols=60 Identities=25% Similarity=0.318 Sum_probs=47.4
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEccccc
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif 92 (115)
.+|++|+-+ ..|-+|+.|.-..+ .. ....|+...||+|++|+.+.++.++..+=+.|.+=
T Consensus 372 ~~d~~LlD~-~~GGtG~~fdW~~l------~~-~~~~p~iLAGGL~p~NV~~ai~~~p~gvDvsSGVE 431 (452)
T 1pii_A 372 HVDKYVLDN-GQGGSGQRFDWSLL------NG-QSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVE 431 (452)
T ss_dssp TCCEEEEES-CSCCSSCCCCGGGG------TT-SCCTTEEEESSCCTTTHHHHHTTCCSEEEECGGGE
T ss_pred cccEEEecC-CCCCCCCccCHHHh------hc-ccCCcEEEEcCCCHHHHHHHHhcCCCEEEeCCcee
Confidence 479999887 55778998875432 12 23678999999999999887779999999999884
No 200
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.07 E-value=0.071 Score=38.31 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=46.0
Q ss_pred CCEEEEEe--eeCCCCCccc-------------chhHHHHHHHHHhhCCCCcEEEEcCCCh-------hhHHHHHHcCCC
Q 033598 26 VEMVLVMT--VEPGFGGQKF-------------MPEMMDKVRSLRNRYPSLDIEVDGGLGP-------STIAEAASAGAN 83 (115)
Q Consensus 26 vD~vlvm~--v~pG~~gq~~-------------~~~~~~ki~~l~~~~~~~~i~~dGGI~~-------~ni~~l~~~Gad 83 (115)
+|+|-+.. ..|-.+|... ....++-++++++.. ++|+.+-+++++ +.++.+.++|||
T Consensus 32 ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad 110 (248)
T 1geq_A 32 AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRAGVRNFLAEAKASGVD 110 (248)
T ss_dssp BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHHHHCHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhhhcCHHHHHHHHHHCCCC
Confidence 89987641 2344544321 133467788888764 688888887785 788899999999
Q ss_pred EEEEcccc
Q 033598 84 CIVAGSSV 91 (115)
Q Consensus 84 ~iv~Gsai 91 (115)
.++++..-
T Consensus 111 ~v~~~~~~ 118 (248)
T 1geq_A 111 GILVVDLP 118 (248)
T ss_dssp EEEETTCC
T ss_pred EEEECCCC
Confidence 99998643
No 201
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.96 E-value=0.13 Score=40.62 Aligned_cols=76 Identities=20% Similarity=0.363 Sum_probs=53.1
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCC
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGA 82 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Ga 82 (115)
+|.++.+.. .+.++.+++ .++|+|.+-+. .| ......+.++++++.. +.++.+-+-.+.+.+..+.++||
T Consensus 137 v~~~v~~~~-~e~~~~lve--aGvdvIvldta-~G-----~~~~~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGA 206 (400)
T 3ffs_A 137 VGAAIGVNE-IERAKLLVE--AGVDVIVLDSA-HG-----HSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGA 206 (400)
T ss_dssp CEEEECCC--CHHHHHHHH--HTCSEEEECCS-CC-----SBHHHHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTC
T ss_pred EEeecCCCH-HHHHHHHHH--cCCCEEEEeCC-CC-----CcccHHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCC
Confidence 567777665 677777773 48998864322 12 1233456678887765 67777645578999999999999
Q ss_pred CEEEEc
Q 033598 83 NCIVAG 88 (115)
Q Consensus 83 d~iv~G 88 (115)
|.+++|
T Consensus 207 D~I~vG 212 (400)
T 3ffs_A 207 DGIKVG 212 (400)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999996
No 202
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=94.95 E-value=0.15 Score=33.95 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=54.4
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCC--ChhhH----HHHHH
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGL--GPSTI----AEAAS 79 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI--~~~ni----~~l~~ 79 (115)
+.+.+|.+.+.+...+ ..+|.|.+-+....+. +...+-++++++... ++++.+-|.. ..+.. +.+.+
T Consensus 37 lG~~~p~e~~v~~a~~-~~~d~v~lS~~~~~~~-----~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~ 110 (137)
T 1ccw_A 37 IGVLSPQELFIKAAIE-TKADAILVSSLYGQGE-----IDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKD 110 (137)
T ss_dssp EEEEECHHHHHHHHHH-HTCSEEEEEECSSTHH-----HHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHh-cCCCEEEEEecCcCcH-----HHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHH
Confidence 4566788777666643 5799998765553211 122233555555533 5777665542 23443 45899
Q ss_pred cCCCEEEEcccccCCCCHHHHHHHHHHHH
Q 033598 80 AGANCIVAGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 80 ~Gad~iv~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
.|+|.+.- ...+..+.++++++.+
T Consensus 111 ~G~d~~~~-----~g~~~~~~~~~l~~~~ 134 (137)
T 1ccw_A 111 MGYDRVYA-----PGTPPEVGIADLKKDL 134 (137)
T ss_dssp TTCSEECC-----TTCCHHHHHHHHHHHH
T ss_pred CCCCEEEC-----CCCCHHHHHHHHHHHh
Confidence 99997632 2357778888877654
No 203
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.85 E-value=0.31 Score=37.65 Aligned_cols=76 Identities=20% Similarity=0.389 Sum_probs=54.2
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCC
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGA 82 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Ga 82 (115)
+|+.+...+ .+.++.+++ .++|+|.+ +...+ .....++.++++++.. ++|+.+-+-.+.+.+..+.++||
T Consensus 98 vga~ig~~~-~e~a~~l~e--aGad~I~l---d~a~G---~~~~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGa 167 (361)
T 3khj_A 98 VGAAIGVNE-IERAKLLVE--AGVDVIVL---DSAHG---HSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGA 167 (361)
T ss_dssp CEEEECTTC-HHHHHHHHH--TTCSEEEE---CCSCC---SBHHHHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTC
T ss_pred EEEEeCCCH-HHHHHHHHH--cCcCeEEE---eCCCC---CcHHHHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCc
Confidence 566666655 677777763 47998854 32221 1234556788888776 78888766689999999999999
Q ss_pred CEEEEc
Q 033598 83 NCIVAG 88 (115)
Q Consensus 83 d~iv~G 88 (115)
|.+.+|
T Consensus 168 D~I~VG 173 (361)
T 3khj_A 168 DGIKVG 173 (361)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999996
No 204
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=94.82 E-value=0.42 Score=30.28 Aligned_cols=78 Identities=9% Similarity=0.088 Sum_probs=52.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCC-CHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAP-EPAH 99 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~-d~~~ 99 (115)
...|.|++-.--|+. ..++-++++++ ..+++|+.+ .+.-+.+......++|++.++ .+.- ++.+
T Consensus 50 ~~~dlii~D~~l~~~-------~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l-----~Kp~~~~~~ 117 (144)
T 3kht_A 50 AKYDLIILDIGLPIA-------NGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVV-----DKSSNNVTD 117 (144)
T ss_dssp CCCSEEEECTTCGGG-------CHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEE-----ECCTTSHHH
T ss_pred CCCCEEEEeCCCCCC-------CHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEE-----ECCCCcHHH
Confidence 468888764444442 35666788887 456777665 455678888889999999874 3455 6777
Q ss_pred HHHHHHHHHHHHhh
Q 033598 100 VISLMRKSVEDAQK 113 (115)
Q Consensus 100 ~~~~l~~~~~~~~~ 113 (115)
-...++..++.+.+
T Consensus 118 l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 118 FYGRIYAIFSYWLT 131 (144)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77777777765544
No 205
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.61 E-value=0.15 Score=39.25 Aligned_cols=69 Identities=22% Similarity=0.395 Sum_probs=48.7
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+.++.+++..+++|.+.+- ...| ..+..++.++++++..+++|+.+-+..+.+....+.++|||+++++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~-~~~g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLD-VANG-----YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEE-CSCT-----TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEE-ecCC-----CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 3444555211268876532 2222 2245678899999887778888877889999999999999999875
No 206
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=94.49 E-value=0.058 Score=39.71 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=50.8
Q ss_pred EEEeeeCC---CCCcccchhHHHH-HHHHHhhC-CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCCCCHHHHH
Q 033598 30 LVMTVEPG---FGGQKFMPEMMDK-VRSLRNRY-PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 30 lvm~v~pG---~~gq~~~~~~~~k-i~~l~~~~-~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
++++-+|- -+|....++..+. .+.+|+.. .+++|.-=|+++++|+.++ .+.++|++-+|++.++++++.+.+
T Consensus 153 ~vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~f~~ii 230 (233)
T 2jgq_A 153 LVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTII 230 (233)
T ss_dssp EEEEECCGGGTTC--CCCHHHHHHHHHHHHHHSCTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHHHHHH
T ss_pred eEEEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHHHHHHH
Confidence 34567772 1455555555444 33455554 5789999999999999986 678999999999998877665543
No 207
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.48 E-value=0.1 Score=43.10 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=41.8
Q ss_pred HHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcC-CCEEEEcccccCCCCHHHHH
Q 033598 49 DKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAG-ANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~ 101 (115)
+.++++++.. ++|+.+-|||+ ++...++++.| +|.+.+|++.+..+++-+.+
T Consensus 284 ~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~ 337 (690)
T 3k30_A 284 EFVAGLKKLT-TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKI 337 (690)
T ss_dssp HHHTTSGGGC-SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHHHHHc-CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHH
Confidence 3355555554 79999999996 89999988887 99999999999888875544
No 208
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.48 E-value=0.1 Score=43.49 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=43.7
Q ss_pred HHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC-CCEEEEcccccCCCCHHHHH
Q 033598 48 MDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 48 ~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~ 101 (115)
++.++++++.. ++|+.+-||| +++...++++.| +|.+.+|++++..+++-+.+
T Consensus 280 ~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~ 334 (729)
T 1o94_A 280 IPWVKLVKQVS-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKV 334 (729)
T ss_dssp HHHHHHHHTTC-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHH
T ss_pred HHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHH
Confidence 44566777664 7999999999 599999999888 99999999998888875544
No 209
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.36 E-value=0.16 Score=39.59 Aligned_cols=67 Identities=21% Similarity=0.130 Sum_probs=46.2
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+.++.+++ .++|+|.+-+ ..|+. ....+.++++++..+++++.+=+-.|.+....+.++|||.+++|
T Consensus 103 e~~~~a~~--aGvdvI~id~-a~G~~-----~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 103 QRAEALRD--AGADFFCVDV-AHAHA-----KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHH--TTCCEEEEEC-SCCSS-----HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHH--cCCCEEEEeC-CCCCc-----HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 45555552 4799665432 22432 34456688888776678877734579999999999999999985
No 210
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=94.31 E-value=0.11 Score=38.63 Aligned_cols=71 Identities=18% Similarity=0.282 Sum_probs=49.4
Q ss_pred EEeeeCC---CCCcccchhHHHHHH-HHHhh---------CCCCcEEEEcCCChhhHHHHHHc-CCCEEEEcccccCCCC
Q 033598 31 VMTVEPG---FGGQKFMPEMMDKVR-SLRNR---------YPSLDIEVDGGLGPSTIAEAASA-GANCIVAGSSVFGAPE 96 (115)
Q Consensus 31 vm~v~pG---~~gq~~~~~~~~ki~-~l~~~---------~~~~~i~~dGGI~~~ni~~l~~~-Gad~iv~Gsaif~~~d 96 (115)
++.-+|- -+|..-.++..+.+. .+|+. ..+++|.-=|+++++|+.++... ++|++-+|++..++++
T Consensus 162 vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~ 241 (250)
T 1yya_A 162 VIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELES 241 (250)
T ss_dssp EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHH
T ss_pred EEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhChHH
Confidence 3467772 145555544444432 23332 24689999999999999999877 9999999999988776
Q ss_pred HHHHH
Q 033598 97 PAHVI 101 (115)
Q Consensus 97 ~~~~~ 101 (115)
+.+-+
T Consensus 242 F~~ii 246 (250)
T 1yya_A 242 FLALL 246 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 211
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=94.17 E-value=0.093 Score=38.50 Aligned_cols=76 Identities=17% Similarity=0.213 Sum_probs=47.9
Q ss_pred HhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh----hCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 20 VEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN----RYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 20 ~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~----~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
+.+.+.+...++|+..|-..........++++.++++ ....+ -.+.+|.|.+- ....+.|++.+=+||+||.+.
T Consensus 153 i~~~~~l~l~Glmt~~~~~~d~~~~~~~f~~l~~l~~~l~~~~~~~-~~LSmGmS~d~-~~Ai~~G~t~vRvGt~iFg~r 230 (245)
T 3sy1_A 153 VAELPRLRLRGLSAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHI-DTLALGQSDDM-EAAIAAGSTMVAIGTAIFGAR 230 (245)
T ss_dssp HTTCTTEEEEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTSTTC-CEEECCCSTTH-HHHHHHTCCEEEESHHHHCC-
T ss_pred HHcCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEeccCcHhH-HHHHHcCCCEEECchHHhCCC
Confidence 3334678999999865533332223345666666544 23233 46788877664 444678999999999999877
Q ss_pred CH
Q 033598 96 EP 97 (115)
Q Consensus 96 d~ 97 (115)
++
T Consensus 231 ~y 232 (245)
T 3sy1_A 231 DY 232 (245)
T ss_dssp --
T ss_pred CC
Confidence 54
No 212
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=94.17 E-value=0.22 Score=38.32 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=50.9
Q ss_pred CCCEEEEEeee-CCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVE-PGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~-pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
.+|++-+..-. ++..+....+.....++ +.. ..++.+-|+.+++...++++.| +|.+.+|+.+...+|+-+.++
T Consensus 254 ~~~~i~~~~~~~~~~~~~~~~~~~a~~ik---~~~-~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~ 329 (358)
T 4a3u_A 254 DIAFLGMREGAVDGTFGKTDQPKLSPEIR---KVF-KPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFF 329 (358)
T ss_dssp TCSEEEEECCBTTCSSSBCSSCCCHHHHH---HHC-CSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHH
T ss_pred CccccccccccccCcccccccHHHHHHHH---Hhc-CCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHH
Confidence 67887664321 22222333334434444 332 5788899999999999999988 999999999999999865544
No 213
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=94.15 E-value=0.2 Score=37.17 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=50.6
Q ss_pred EEEeeeCC---CCCcccchhHHHHHH-HHHhh----C-----CCCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCCC
Q 033598 30 LVMTVEPG---FGGQKFMPEMMDKVR-SLRNR----Y-----PSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGAP 95 (115)
Q Consensus 30 lvm~v~pG---~~gq~~~~~~~~ki~-~l~~~----~-----~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~~ 95 (115)
++++-+|- -+|..-.++..+.+. .+|+. + .+++|.-=|+++++|+.++. +.++|++-+|++.++ +
T Consensus 162 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~ 240 (250)
T 2j27_A 162 VVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK-P 240 (250)
T ss_dssp EEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-T
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH-H
Confidence 34577772 145555544444433 23332 1 24889999999999999987 899999999999998 8
Q ss_pred CHHHHHH
Q 033598 96 EPAHVIS 102 (115)
Q Consensus 96 d~~~~~~ 102 (115)
++.+-++
T Consensus 241 ~F~~ii~ 247 (250)
T 2j27_A 241 EFVDIIK 247 (250)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 214
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.10 E-value=0.17 Score=37.71 Aligned_cols=74 Identities=19% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.|.+..+.|.+ .++++|=+.+ .++ |....++-++++++.. ++|+. =|..|++..+.+...+|||.+.++.
T Consensus 73 ~p~~~A~~y~~--~GA~~isvlt-d~~-----~f~Gs~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQD--GGARIVSVVT-EQR-----RFQGSLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHH--TTCSEEEEEC-CGG-----GHHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHH--cCCCEEEEec-Chh-----hcCCCHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEEEec
Confidence 45566666652 5899986653 333 2233456677777764 56655 4567777789999999999999997
Q ss_pred cccC
Q 033598 90 SVFG 93 (115)
Q Consensus 90 aif~ 93 (115)
+...
T Consensus 144 a~l~ 147 (272)
T 3qja_A 144 AALE 147 (272)
T ss_dssp GGSC
T ss_pred ccCC
Confidence 7664
No 215
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=93.92 E-value=0.42 Score=35.57 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=48.8
Q ss_pred EEeeeC----CCCCcccchhHHHHHH-HHHhh---------CCCCcEEEEcCCChhhHHHHHHc-CCCEEEEcccccCCC
Q 033598 31 VMTVEP----GFGGQKFMPEMMDKVR-SLRNR---------YPSLDIEVDGGLGPSTIAEAASA-GANCIVAGSSVFGAP 95 (115)
Q Consensus 31 vm~v~p----G~~gq~~~~~~~~ki~-~l~~~---------~~~~~i~~dGGI~~~ni~~l~~~-Gad~iv~Gsaif~~~ 95 (115)
++.-+| | +|....++..+.+. .+|+. ..+++|.-=|+++++|+.++... ++|++-+|++-++++
T Consensus 166 vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 244 (257)
T 2yc6_A 166 VIAYEPVWSIG-TGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLKPE 244 (257)
T ss_dssp EEEECCGGGTT-TSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred EEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHHHHHH
Confidence 446777 4 45554444444332 23332 24689999999999999999877 999999999998876
Q ss_pred CHHHHHH
Q 033598 96 EPAHVIS 102 (115)
Q Consensus 96 d~~~~~~ 102 (115)
..+-++
T Consensus 245 -F~~Ii~ 250 (257)
T 2yc6_A 245 -FMTMID 250 (257)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 655443
No 216
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=93.90 E-value=0.12 Score=38.36 Aligned_cols=43 Identities=12% Similarity=0.284 Sum_probs=37.0
Q ss_pred CCCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCCCCHHHHH
Q 033598 59 PSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 59 ~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
.+++|.-=|+++++|+.++. +.++|++-+|++-.+++++.+-+
T Consensus 203 ~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii 246 (252)
T 2btm_A 203 EAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPASFLQLV 246 (252)
T ss_dssp TTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred CceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHH
Confidence 46899999999999999987 89999999999988876665444
No 217
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=93.89 E-value=0.19 Score=37.20 Aligned_cols=72 Identities=15% Similarity=0.298 Sum_probs=50.7
Q ss_pred EEEeeeCCC---CCcccchhHHHHHH-HHHhh----C-----CCCcEEEEcCCChhhHHHHHH-cCCCEEEEcccccCCC
Q 033598 30 LVMTVEPGF---GGQKFMPEMMDKVR-SLRNR----Y-----PSLDIEVDGGLGPSTIAEAAS-AGANCIVAGSSVFGAP 95 (115)
Q Consensus 30 lvm~v~pG~---~gq~~~~~~~~ki~-~l~~~----~-----~~~~i~~dGGI~~~ni~~l~~-~Gad~iv~Gsaif~~~ 95 (115)
++++-+|-. +|..-.++..+.+. .+|+. + .+++|.-=|+++++|+.++.. .++|++-+|++.++ +
T Consensus 160 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~ 238 (248)
T 1o5x_A 160 VILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-E 238 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS-T
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHH-H
Confidence 355777822 45555544444432 33332 2 248899999999999999876 99999999999999 8
Q ss_pred CHHHHHH
Q 033598 96 EPAHVIS 102 (115)
Q Consensus 96 d~~~~~~ 102 (115)
++.+-++
T Consensus 239 ~F~~ii~ 245 (248)
T 1o5x_A 239 SFVDIIK 245 (248)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 8876554
No 218
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.85 E-value=0.3 Score=40.12 Aligned_cols=80 Identities=23% Similarity=0.332 Sum_probs=49.0
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC--C-------CcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHH
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGF--G-------GQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEA 77 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~--~-------gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l 77 (115)
|..|. +..+.++. .++|.|-| .+-||. + |-+.. ...-...+.++.+ ++||.+||||+ ...+...
T Consensus 329 NVaT~-e~a~~Li~--aGAD~vkV-GiGpGSiCtTr~v~GvG~PQ~-tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~KA 402 (556)
T 4af0_A 329 NVVTR-EQAAQLIA--AGADGLRI-GMGSGSICITQEVMAVGRPQG-TAVYAVAEFASRF-GIPCIADGGIGNIGHIAKA 402 (556)
T ss_dssp EECSH-HHHHHHHH--HTCSEEEE-CSSCSTTBCCTTTCCSCCCHH-HHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHH
T ss_pred cccCH-HHHHHHHH--cCCCEEee-cCCCCcccccccccCCCCcHH-HHHHHHHHHHHHc-CCCEEecCCcCcchHHHHH
Confidence 34444 33344441 47998865 466763 1 11211 2222233333332 69999999997 4577777
Q ss_pred HHcCCCEEEEcccccC
Q 033598 78 ASAGANCIVAGSSVFG 93 (115)
Q Consensus 78 ~~~Gad~iv~Gsaif~ 93 (115)
+.+|||.+-+||.+-+
T Consensus 403 laaGAd~VMlGsllAG 418 (556)
T 4af0_A 403 LALGASAVMMGGLLAG 418 (556)
T ss_dssp HHTTCSEEEESTTTTT
T ss_pred hhcCCCEEEEchhhcc
Confidence 8999999999987754
No 219
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=93.85 E-value=0.61 Score=28.88 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=52.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
...|.|++-..-|+.. .++-++++++.. +..+|.+..+-+.+.+....++|++.+ |.+.-++.+-.
T Consensus 49 ~~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~-----l~kP~~~~~l~ 116 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD-------GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDY-----LEKPFDNDALL 116 (132)
T ss_dssp TCCSEEEEESCBTTBC-------HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEE-----ECSSCCHHHHH
T ss_pred cCCCEEEEecCCCCCC-------HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHH-----hhCCCCHHHHH
Confidence 4689888765566643 455677777764 467888888888888888999999877 44545677666
Q ss_pred HHHHHHHHH
Q 033598 102 SLMRKSVED 110 (115)
Q Consensus 102 ~~l~~~~~~ 110 (115)
..+++....
T Consensus 117 ~~i~~~~~~ 125 (132)
T 3lte_A 117 DRIHDLVNE 125 (132)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHcCC
Confidence 666665543
No 220
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=93.69 E-value=0.078 Score=39.51 Aligned_cols=72 Identities=17% Similarity=0.295 Sum_probs=50.0
Q ss_pred EEeeeCCC---CCcccchhHHHHHH-HHHhh--------CCCCcEEEEcCCChhhHHHHHHc-CCCEEEEcccccCCCCH
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKVR-SLRNR--------YPSLDIEVDGGLGPSTIAEAASA-GANCIVAGSSVFGAPEP 97 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki~-~l~~~--------~~~~~i~~dGGI~~~ni~~l~~~-Gad~iv~Gsaif~~~d~ 97 (115)
++.-+|-. +|..-.++..+.+. .+|+. ..+++|.-=|+++++|+.++... ++|++-+|++.++++++
T Consensus 165 vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F 244 (256)
T 1aw2_A 165 IIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSF 244 (256)
T ss_dssp EEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGCHHHH
T ss_pred EEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeecHHHhChHHH
Confidence 34677732 45555554444433 33332 12478999999999999999777 99999999999987776
Q ss_pred HHHHH
Q 033598 98 AHVIS 102 (115)
Q Consensus 98 ~~~~~ 102 (115)
.+-++
T Consensus 245 ~~Ii~ 249 (256)
T 1aw2_A 245 AAIAK 249 (256)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 221
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=93.58 E-value=0.65 Score=34.68 Aligned_cols=78 Identities=21% Similarity=0.167 Sum_probs=52.7
Q ss_pred ecCC-CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCE
Q 033598 7 LKPG-TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANC 84 (115)
Q Consensus 7 l~p~-t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~ 84 (115)
|+++ .|.+....|.+ .+++.|=+++ .|+|-+ ..++-++++++.. ++|+.. |+-+++..+.+...+|||.
T Consensus 75 i~~~~dp~~~A~~y~~--~GA~~IsVlt-d~~~f~-----Gs~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~ 145 (272)
T 3tsm_A 75 IRPDFDPPALAKAYEE--GGAACLSVLT-DTPSFQ-----GAPEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADC 145 (272)
T ss_dssp SCSSCCHHHHHHHHHH--TTCSEEEEEC-CSTTTC-----CCHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSE
T ss_pred cCCCCCHHHHHHHHHH--CCCCEEEEec-cccccC-----CCHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCE
Confidence 4444 45566666652 5799997765 555432 2334567777653 677654 4447788999999999999
Q ss_pred EEEcccccC
Q 033598 85 IVAGSSVFG 93 (115)
Q Consensus 85 iv~Gsaif~ 93 (115)
+.++.+...
T Consensus 146 VlLi~a~L~ 154 (272)
T 3tsm_A 146 ILIIMASVD 154 (272)
T ss_dssp EEEETTTSC
T ss_pred EEEcccccC
Confidence 999987663
No 222
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.55 E-value=0.48 Score=37.83 Aligned_cols=78 Identities=15% Similarity=0.246 Sum_probs=51.9
Q ss_pred eEEEecCCCC-HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPGTS-VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~t~-~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
+|..+..... .+.++.+++ .++|.|-+-+ +. |. ....++.++++++..+++|+.+-+=.+.+.+..+.++|
T Consensus 246 vga~vG~~~~~~~~a~~~~~--aG~d~v~i~~---~~-G~--~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aG 317 (514)
T 1jcn_A 246 CGAAVGTREDDKYRLDLLTQ--AGVDVIVLDS---SQ-GN--SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG 317 (514)
T ss_dssp CEEEECSSTTHHHHHHHHHH--TTCSEEEECC---SC-CC--SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT
T ss_pred eeeEecCchhhHHHHHHHHH--cCCCEEEeec---cC-Cc--chhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcC
Confidence 3455543333 455555552 5799886532 22 11 13455778888887777888764457899999999999
Q ss_pred CCEEEEc
Q 033598 82 ANCIVAG 88 (115)
Q Consensus 82 ad~iv~G 88 (115)
||.+++|
T Consensus 318 ad~I~vg 324 (514)
T 1jcn_A 318 VDGLRVG 324 (514)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999994
No 223
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=93.50 E-value=0.11 Score=39.78 Aligned_cols=51 Identities=18% Similarity=0.265 Sum_probs=42.4
Q ss_pred CCcEEEEcCCCh----hh---HHHHHH-cCCCEEEEcccccC--CCCHHHHHHHHHHHHHH
Q 033598 60 SLDIEVDGGLGP----ST---IAEAAS-AGANCIVAGSSVFG--APEPAHVISLMRKSVED 110 (115)
Q Consensus 60 ~~~i~~dGGI~~----~n---i~~l~~-~Gad~iv~Gsaif~--~~d~~~~~~~l~~~~~~ 110 (115)
.+|+.+.||=+. +. +....+ .|+.++++|+.||+ .+||.+.++.+.++++.
T Consensus 237 ~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH~ 297 (307)
T 3fok_A 237 TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVHT 297 (307)
T ss_dssp SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHCC
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHHh
Confidence 489999999773 23 344567 79999999999999 89999999999998763
No 224
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=93.49 E-value=0.91 Score=29.10 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=49.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcC-CCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~ 101 (115)
...|.|++-..-|+.. .++-++++++..+++|+.+..+ -+.+......+.| ++.++ .+.-++.+-.
T Consensus 57 ~~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l-----~KP~~~~~l~ 124 (153)
T 3hv2_A 57 REVDLVISAAHLPQMD-------GPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYL-----SKPWDDQELL 124 (153)
T ss_dssp SCCSEEEEESCCSSSC-------HHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEE-----CSSCCHHHHH
T ss_pred CCCCEEEEeCCCCcCc-------HHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEE-----eCCCCHHHHH
Confidence 4688888765556543 4556777777777888665544 5667778888999 88773 3444666666
Q ss_pred HHHHHHHH
Q 033598 102 SLMRKSVE 109 (115)
Q Consensus 102 ~~l~~~~~ 109 (115)
..++..++
T Consensus 125 ~~i~~~l~ 132 (153)
T 3hv2_A 125 LALRQALE 132 (153)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 225
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=93.38 E-value=0.42 Score=29.99 Aligned_cols=73 Identities=7% Similarity=0.031 Sum_probs=48.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
..+|.|++-.--|+..|.. -++++++..+++|+.+ .+--+.+......++|++.++. +.-++.+-..
T Consensus 58 ~~~dlvi~D~~l~~~~g~~-------~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~L~~ 125 (135)
T 3snk_A 58 TRPGIVILDLGGGDLLGKP-------GIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLH-----KPLDGKELLN 125 (135)
T ss_dssp CCCSEEEEEEETTGGGGST-------THHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCchHHH-------HHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhcc-----CCCCHHHHHH
Confidence 4688888776667755433 3566777666778665 4556677788889999998744 4446666555
Q ss_pred HHHHHH
Q 033598 103 LMRKSV 108 (115)
Q Consensus 103 ~l~~~~ 108 (115)
.++..+
T Consensus 126 ~i~~~~ 131 (135)
T 3snk_A 126 AVTFHD 131 (135)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 555443
No 226
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=93.29 E-value=0.55 Score=36.23 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=49.6
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchh-HHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPE-MMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~-~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
+++.+.+....+..+.+. + .++|.+.+- ..+...+ .+.+. ..+.+.++++.. ++|+.+=|..+.+.+..+.++|
T Consensus 158 v~~~v~~~~~~e~a~~~~-~-agad~i~i~-~~~~~~~-~~~~~~~~~~i~~l~~~~-~~pvi~ggi~t~e~a~~~~~~G 232 (393)
T 2qr6_A 158 VAVRVSPQNVREIAPIVI-K-AGADLLVIQ-GTLISAE-HVNTGGEALNLKEFIGSL-DVPVIAGGVNDYTTALHMMRTG 232 (393)
T ss_dssp CEEEECTTTHHHHHHHHH-H-TTCSEEEEE-CSSCCSS-CCCC-----CHHHHHHHC-SSCEEEECCCSHHHHHHHHTTT
T ss_pred EEEEeCCccHHHHHHHHH-H-CCCCEEEEe-CCccccc-cCCCcccHHHHHHHHHhc-CCCEEECCcCCHHHHHHHHHcC
Confidence 344555544444444443 2 478987542 2221010 11111 344577777764 7999997778999999999999
Q ss_pred CCEEEEcc
Q 033598 82 ANCIVAGS 89 (115)
Q Consensus 82 ad~iv~Gs 89 (115)
||.+++|.
T Consensus 233 ad~i~vg~ 240 (393)
T 2qr6_A 233 AVGIIVGG 240 (393)
T ss_dssp CSEEEESC
T ss_pred CCEEEECC
Confidence 99999976
No 227
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=93.08 E-value=0.89 Score=32.13 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=57.3
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh--hhHHHHHHcCCCEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP--STIAEAASAGANCIV 86 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~--~ni~~l~~~Gad~iv 86 (115)
+.+..+.++.+.+ .++|++.+--..--|- +.. ...++.++++++.. +.++.++-=++. +.++.+.++|+|++.
T Consensus 22 ~~~~~~~i~~~~~--~G~d~i~l~~~dg~f~-~~~-~~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~v~~~~~~Gad~v~ 96 (230)
T 1rpx_A 22 FSKLGEQVKAIEQ--AGCDWIHVDVMDGRFV-PNI-TIGPLVVDSLRPIT-DLPLDVHLMIVEPDQRVPDFIKAGADIVS 96 (230)
T ss_dssp GGGHHHHHHHHHH--TTCCCEEEEEEBSSSS-SCB-CCCHHHHHHHGGGC-CSCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHH--CCCCEEEEeeccCCcc-ccc-ccCHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEE
Confidence 3334455665552 4799998754222221 111 23456677887764 567777777775 468889999999998
Q ss_pred EcccccCCCCHHHHHHHHHH
Q 033598 87 AGSSVFGAPEPAHVISLMRK 106 (115)
Q Consensus 87 ~Gsaif~~~d~~~~~~~l~~ 106 (115)
+....+..+.+.+.++.+++
T Consensus 97 vh~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 97 VHCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp EECSTTTCSCHHHHHHHHHH
T ss_pred EEecCccchhHHHHHHHHHH
Confidence 87652233566666666654
No 228
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=92.99 E-value=0.34 Score=45.21 Aligned_cols=69 Identities=13% Similarity=0.211 Sum_probs=51.1
Q ss_pred CCCCEEEEEeeeCCC-CCc----ccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHH-----------HcCCCEEE
Q 033598 24 NPVEMVLVMTVEPGF-GGQ----KFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAA-----------SAGANCIV 86 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~-~gq----~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~-----------~~Gad~iv 86 (115)
.++|.|.+|-+..+- +|. ++....+..+.++++.. ++|+.++|||. .+.+..++ .+|||.+-
T Consensus 715 aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~ 793 (2060)
T 2uva_G 715 ANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCM 793 (2060)
T ss_dssp HCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEE
T ss_pred cCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEE
Confidence 478999866665322 222 12245677888888764 79999999996 66788888 99999999
Q ss_pred EcccccC
Q 033598 87 AGSSVFG 93 (115)
Q Consensus 87 ~Gsaif~ 93 (115)
+||....
T Consensus 794 ~GT~f~~ 800 (2060)
T 2uva_G 794 FGSRMMT 800 (2060)
T ss_dssp ESGGGGG
T ss_pred Echhhhc
Confidence 9998654
No 229
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=92.92 E-value=1.1 Score=28.19 Aligned_cols=73 Identities=18% Similarity=0.297 Sum_probs=49.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc-CCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG-GLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-. .|+. ..++.++++++..+++|+.+.. .-+.+......+.|++.++ .+.-++.+-..
T Consensus 47 ~~~dlvi~d~-~~~~-------~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~l~~ 113 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGE-------ESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYI-----LKPFRLDYLLE 113 (142)
T ss_dssp SCCSEEEEEC-TTTH-------HHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEE-----ESSCCHHHHHH
T ss_pred cCCCEEEEeC-CCCC-------cHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeE-----eCCCCHHHHHH
Confidence 4689888766 5542 3456677888777788876554 4566778888999998764 34446666666
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..+.
T Consensus 114 ~i~~~~~ 120 (142)
T 2qxy_A 114 RVKKIIS 120 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
No 230
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=92.90 E-value=0.14 Score=38.10 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=38.2
Q ss_pred CCcEEEEcCCChhhHHHHHH-cCCCEEEEcccccCCCCHHHHHHH
Q 033598 60 SLDIEVDGGLGPSTIAEAAS-AGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 60 ~~~i~~dGGI~~~ni~~l~~-~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
+++|.-=|+++++|+.++.. .++|++-+|++.++++++.+-++.
T Consensus 204 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~~ 248 (255)
T 1tre_A 204 QVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKA 248 (255)
T ss_dssp HCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGCHHHHHHHHHH
T ss_pred cccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHHHH
Confidence 58899999999999999876 999999999999988777666554
No 231
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=92.86 E-value=0.99 Score=27.76 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=48.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc-CCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG-GLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+..| ++-++++++..++.|+.+.. .-+.+......++|++.++. +.-++.+-..
T Consensus 46 ~~~dlvi~D~~l~~~~g-------~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~ 113 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSG-------VELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIE-----KPFEDTVIIE 113 (126)
T ss_dssp CCSEEEEEECCSTTSCH-------HHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEECCCCCCCH-------HHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHhee-----CCCCHHHHHH
Confidence 35788776555566443 44566777766778876554 45667788889999987743 4446666655
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 114 ~i~~~~~ 120 (126)
T 1dbw_A 114 AIERASE 120 (126)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5655543
No 232
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=92.72 E-value=0.6 Score=33.51 Aligned_cols=56 Identities=20% Similarity=0.415 Sum_probs=38.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.++|+| -++.||.... ..++-++++++. ..++|+.+.|||+ .+.+..+.++|||.+
T Consensus 144 aGad~I---~tstg~~~gg---a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 144 AGADFI---KTSTGFAPRG---TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HTCSEE---ECCCSCSSSC---CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred hCCCEE---EECCCCCCCC---CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 489999 3444652111 233445555554 3479999999997 788888889999964
No 233
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=92.70 E-value=0.96 Score=27.98 Aligned_cols=76 Identities=13% Similarity=0.211 Sum_probs=48.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
...|.|++-.--|+.. .++-++++++. .+++|+.+..+-..+......+.|++.++ .+.-++.+-.
T Consensus 46 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~ 113 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMD-------GYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYL-----VKPVKPPVLI 113 (133)
T ss_dssp SCCSEEEECSSCSSSC-------HHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEE-----ESSCCHHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEE-----eccCCHHHHH
Confidence 4689888755556533 45567777765 45788877776554444777889988763 3555777777
Q ss_pred HHHHHHHHHH
Q 033598 102 SLMRKSVEDA 111 (115)
Q Consensus 102 ~~l~~~~~~~ 111 (115)
..++..++..
T Consensus 114 ~~i~~~l~~~ 123 (133)
T 3nhm_A 114 AQLHALLARA 123 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 7787777653
No 234
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=92.57 E-value=0.073 Score=43.06 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=30.4
Q ss_pred CCCCcEEEEcCCChhhHHHHHHcCCCEEEEc--ccccC
Q 033598 58 YPSLDIEVDGGLGPSTIAEAASAGANCIVAG--SSVFG 93 (115)
Q Consensus 58 ~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G--saif~ 93 (115)
++++.|++.||||++++..+.+.|+++++.| +.|..
T Consensus 284 ~~~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT~Lt~ 321 (494)
T 2f7f_A 284 FTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp CTTCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred CCceEEEEECCCCHHHHHHHHHcCCCEEEEecCccccc
Confidence 3478899999999999999999999888777 45554
No 235
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=92.40 E-value=1.3 Score=28.16 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=50.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-.--|+.. .++.++++++..++.|+.+ .+.-+.+......++|++.++. +.-++.+-..
T Consensus 65 ~~~dlii~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~ 132 (150)
T 4e7p_A 65 ESVDIAILDVEMPVKT-------GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVL-----KERSIADLMQ 132 (150)
T ss_dssp SCCSEEEECSSCSSSC-------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE-----TTSCHHHHHH
T ss_pred cCCCEEEEeCCCCCCc-------HHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEe-----cCCCHHHHHH
Confidence 4688887654445533 4566788888777888654 5556777888899999998744 4446666666
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 133 ~i~~~~~ 139 (150)
T 4e7p_A 133 TLHTVLE 139 (150)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 6666654
No 236
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=92.37 E-value=0.29 Score=35.47 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=41.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCC--EEEEcccccC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGAN--CIVAGSSVFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad--~iv~Gsaif~ 93 (115)
.++|+|= +..||+...-.++..+.+++.. ..++++-+.|||+ .+..-.+.++||+ +...|..||+
T Consensus 145 aGADfVK---TsTGf~~~gat~~dv~~m~~~v--g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 145 GGADFLK---TSTGFGPRGASLEDVALLVRVA--QGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp HTCSEEE---CCCSSSSCCCCHHHHHHHHHHH--TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred hCCCEEE---eCCCCCCCCCCHHHHHHHHHhh--CCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 3789984 5556653322233434444332 4579999999998 4567778899999 5544455654
No 237
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=92.26 E-value=1.5 Score=28.24 Aligned_cols=75 Identities=9% Similarity=0.162 Sum_probs=50.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-..-|+.. .++-++++++. .+++|+.+ .+.-+.+......++|++.++ .+.-++.+-
T Consensus 50 ~~~dlii~D~~l~~~~-------g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l 117 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMD-------GYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFI-----TKPCKDVVL 117 (154)
T ss_dssp CCCSEEEEESCCSSSC-------HHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEE-----ESSCCHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEE-----eCCCCHHHH
Confidence 4689888766667644 34556666665 25677655 555677888889999999874 344466666
Q ss_pred HHHHHHHHHH
Q 033598 101 ISLMRKSVED 110 (115)
Q Consensus 101 ~~~l~~~~~~ 110 (115)
...++..++.
T Consensus 118 ~~~i~~~l~~ 127 (154)
T 3gt7_A 118 ASHVKRLLSG 127 (154)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6667766654
No 238
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=92.05 E-value=0.4 Score=38.39 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=53.9
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCC-CcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPS-LDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~-~~i~~dGGI~~~ni~~l~~~G 81 (115)
++..+.+....+.++.+.+ .++|.+.+- ...|. .....+.++.+++..++ .++.+-+..+.+....+.++|
T Consensus 234 v~a~v~~~~~~e~~~~l~e--~gv~~l~Vd-~~~g~-----~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aG 305 (503)
T 1me8_A 234 VGAGINTRDFRERVPALVE--AGADVLCID-SSDGF-----SEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAG 305 (503)
T ss_dssp CEEEECSSSHHHHHHHHHH--HTCSEEEEC-CSCCC-----SHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHT
T ss_pred cccccCchhHHHHHHHHHh--hhccceEEe-cccCc-----ccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhC
Confidence 3455566444566666652 378876442 22232 23356667888777666 888888888999999999999
Q ss_pred CCEEEEcc
Q 033598 82 ANCIVAGS 89 (115)
Q Consensus 82 ad~iv~Gs 89 (115)
+|++++|.
T Consensus 306 ad~I~Vg~ 313 (503)
T 1me8_A 306 ADFIKIGI 313 (503)
T ss_dssp CSEEEECS
T ss_pred CCeEEecc
Confidence 99999873
No 239
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=91.86 E-value=1.2 Score=27.83 Aligned_cols=76 Identities=11% Similarity=-0.007 Sum_probs=48.7
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.|++-.--|+. ....++-++++++..+++|+.+ .+.-+.+......++|++.++. +.-++.+-...
T Consensus 50 ~~dlvi~D~~l~~~-----~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~l~~~ 119 (136)
T 3kto_A 50 DAIGMIIEAHLEDK-----KDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIE-----KPFIEHVLVHD 119 (136)
T ss_dssp TEEEEEEETTGGGB-----TTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEE-----SSBCHHHHHHH
T ss_pred CCCEEEEeCcCCCC-----CccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHhee-----CCCCHHHHHHH
Confidence 46666554333430 0235667888888777888665 4555677788889999998743 44466666666
Q ss_pred HHHHHHH
Q 033598 104 MRKSVED 110 (115)
Q Consensus 104 l~~~~~~ 110 (115)
+++....
T Consensus 120 i~~~~~~ 126 (136)
T 3kto_A 120 VQQIING 126 (136)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 6666654
No 240
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=91.80 E-value=1 Score=30.13 Aligned_cols=68 Identities=21% Similarity=0.181 Sum_probs=45.8
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.++. +.. ..+|.|++-..-|+.+| ++-++++++..+++|+.+ .|--+.+......++||+.++.
T Consensus 39 ~~~~al~~-~~~-~~~dlvl~D~~lp~~~g-------~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~ 107 (184)
T 3rqi_A 39 NKDEALKL-AGA-EKFEFITVXLHLGNDSG-------LSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLA 107 (184)
T ss_dssp SHHHHHHH-HTT-SCCSEEEECSEETTEES-------HHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHH-Hhh-CCCCEEEEeccCCCccH-------HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHhee
Confidence 33344444 322 46899887766677544 455677777777888665 5555677788899999998854
No 241
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=91.77 E-value=0.92 Score=41.23 Aligned_cols=88 Identities=18% Similarity=0.182 Sum_probs=53.0
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCccc------chhHHHHHHHHHhh------CCCCcEEEEcCCC
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKF------MPEMMDKVRSLRNR------YPSLDIEVDGGLG 70 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~------~~~~~~ki~~l~~~------~~~~~i~~dGGI~ 70 (115)
+++-+.+..........+.+ .++|.|.+-....|..+... ...+..-|.++++. ..++||.++|||.
T Consensus 996 V~VKlv~~~gi~~~A~~a~~-AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIr 1074 (1479)
T 1ea0_A 996 VTVKLVSRSGIGTIAAGVAK-ANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLK 1074 (1479)
T ss_dssp EEEEEECCTTHHHHHHHHHH-TTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCC
T ss_pred EEEEEcCCCChHHHHHHHHH-cCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCC
Confidence 34555554443333333322 58999987555444322111 01123334444432 2479999999996
Q ss_pred -hhhHHHHHHcCCCEEEEcccc
Q 033598 71 -PSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 71 -~~ni~~l~~~Gad~iv~Gsai 91 (115)
...+...+.+|||.+-+|++.
T Consensus 1075 tG~DVakALaLGAdaV~iGTaf 1096 (1479)
T 1ea0_A 1075 TGRDIVIAAMLGAEEFGIGTAS 1096 (1479)
T ss_dssp SHHHHHHHHHTTCSEEECCHHH
T ss_pred CHHHHHHHHHcCCCeeeEcHHH
Confidence 677778889999999999875
No 242
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=91.60 E-value=3.6 Score=35.02 Aligned_cols=92 Identities=14% Similarity=0.080 Sum_probs=54.8
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh-hhHHHHHHcCCCEEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP-STIAEAASAGANCIV 86 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~-~ni~~l~~~Gad~iv 86 (115)
....|.+.+.+...+ .++|.|.+-+...++. ....+-++.|++....-...+.||+-+ +....+.+.|+|.+.
T Consensus 639 G~~v~~eeiv~aA~e-~~adiVglSsl~~~~~-----~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~~f 712 (762)
T 2xij_A 639 PLFQTPREVAQQAVD-ADVHAVGVSTLAAGHK-----TLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVF 712 (762)
T ss_dssp CTTCCHHHHHHHHHH-TTCSEEEEEECSSCHH-----HHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCEEE
T ss_pred CCCCCHHHHHHHHHH-cCCCEEEEeeecHHHH-----HHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCEEe
Confidence 344555544443333 6899998765544322 223344566666654223566677444 458888999999874
Q ss_pred EcccccCCCCHHHHHHHHHHHHHH
Q 033598 87 AGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 87 ~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
.- ..|..+.+..+++.++.
T Consensus 713 ~p-----gtd~~e~~~~i~~~l~~ 731 (762)
T 2xij_A 713 GP-----GTRIPKAAVQVLDDIEK 731 (762)
T ss_dssp CT-----TCCHHHHHHHHHHHHHH
T ss_pred CC-----CCCHHHHHHHHHHHHHH
Confidence 31 23777777777776654
No 243
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.60 E-value=0.55 Score=36.47 Aligned_cols=80 Identities=10% Similarity=0.078 Sum_probs=53.5
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC-----CCcccchhHHHHHHHHHhhCCCCcEEEEcC---CChhhHHHH
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGF-----GGQKFMPEMMDKVRSLRNRYPSLDIEVDGG---LGPSTIAEA 77 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~-----~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG---I~~~ni~~l 77 (115)
.|++.++.+.....++. -++|.+.+ .++|.. .|..-....++.|+++++.. ++|+.+-|= .+++.+..+
T Consensus 150 nig~~~~~e~~~~~ve~-~~adal~i-hln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~~l 226 (365)
T 3sr7_A 150 NIGLDKPYQAGLQAVRD-LQPLFLQV-HINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQTA 226 (365)
T ss_dssp EEETTSCHHHHHHHHHH-HCCSCEEE-EECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHh-cCCCEEEE-eccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEECCCCCCHHHHHHH
Confidence 45677777765554422 36777653 444421 12121224457788888874 789988853 699999999
Q ss_pred HHcCCCEEEEc
Q 033598 78 ASAGANCIVAG 88 (115)
Q Consensus 78 ~~~Gad~iv~G 88 (115)
.++|||.++++
T Consensus 227 ~~aGad~I~V~ 237 (365)
T 3sr7_A 227 IDLGVKTVDIS 237 (365)
T ss_dssp HHHTCCEEECC
T ss_pred HHcCCCEEEEe
Confidence 99999999985
No 244
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=91.59 E-value=1.1 Score=35.41 Aligned_cols=78 Identities=15% Similarity=0.257 Sum_probs=54.1
Q ss_pred eEEEecCCCC-HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 3 PGVALKPGTS-VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 3 ~Glal~p~t~-~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
+|.++++... .+..+.+++ .++|.+.+-+. .| . ....++.++++++..+++|+.+-|..+.+....+.++|
T Consensus 224 vg~~i~~~~~~~~~a~~l~~--~G~d~ivi~~a----~g-~-~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~G 295 (491)
T 1zfj_A 224 VAAAVGVTSDTFERAEALFE--AGADAIVIDTA----HG-H-SAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAG 295 (491)
T ss_dssp CEEEECSSTTHHHHHHHHHH--HTCSEEEECCS----CT-T-CHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTT
T ss_pred EEEeccCchhHHHHHHHHHH--cCCCeEEEeee----cC-c-chhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcC
Confidence 4555554322 355555552 48999876542 12 2 23567788888888778888866666888888999999
Q ss_pred CCEEEEc
Q 033598 82 ANCIVAG 88 (115)
Q Consensus 82 ad~iv~G 88 (115)
+|.+.+|
T Consensus 296 ad~I~vg 302 (491)
T 1zfj_A 296 VDVVKVG 302 (491)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999987
No 245
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.48 E-value=1 Score=34.02 Aligned_cols=59 Identities=17% Similarity=0.272 Sum_probs=43.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.++|||= ...||+...-..+..+.++++.+. ..+++|-+.|||+ .+....++++||+-+
T Consensus 200 aGADfVK---TSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 200 AGADYVK---TSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp TTCSEEE---CCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred cCCCEEE---cCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 5899995 557887444444455666666543 3579999999998 478888999999965
No 246
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=91.36 E-value=1.7 Score=27.09 Aligned_cols=73 Identities=11% Similarity=0.106 Sum_probs=45.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEc-CCChhhHHHHHHcCCCEEEEcccccCCC-CHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDG-GLGPSTIAEAASAGANCIVAGSSVFGAP-EPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dG-GI~~~ni~~l~~~Gad~iv~Gsaif~~~-d~~~~ 100 (115)
...|.|+ .|+.. .++.++++++. + ++|+.+.. .-+.+......+.|++.++. +.- ++.+-
T Consensus 61 ~~~dlvi----~~~~~-------g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~~l 123 (137)
T 2pln_A 61 RNYDLVM----VSDKN-------ALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIA-----KPYRSIKAL 123 (137)
T ss_dssp SCCSEEE----ECSTT-------HHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCSCHHHH
T ss_pred CCCCEEE----EcCcc-------HHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeee-----CCCCCHHHH
Confidence 4578877 34433 44556777766 6 78866554 45677788889999998743 444 66666
Q ss_pred HHHHHHHHHHHhh
Q 033598 101 ISLMRKSVEDAQK 113 (115)
Q Consensus 101 ~~~l~~~~~~~~~ 113 (115)
...++..+....+
T Consensus 124 ~~~i~~~~~~~~~ 136 (137)
T 2pln_A 124 VARIEARLRFWGS 136 (137)
T ss_dssp HHHHHHHTC----
T ss_pred HHHHHHHHhhhcC
Confidence 6666666554433
No 247
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=91.36 E-value=1.7 Score=27.29 Aligned_cols=74 Identities=12% Similarity=0.123 Sum_probs=48.8
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEEEEc-CCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIEVDG-GLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-.--|+.. .++-++++++ ..+++|+.+.. .-+.+......+.|++.++. +.-++.+-.
T Consensus 52 ~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~L~ 119 (147)
T 2zay_A 52 HPHLIITEANMPKIS-------GMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIA-----KPVNAIRLS 119 (147)
T ss_dssp CCSEEEEESCCSSSC-------HHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEE-----SSCCHHHHH
T ss_pred CCCEEEEcCCCCCCC-------HHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEe-----CCCCHHHHH
Confidence 588888765555533 4556777777 45678866554 45677778888999998743 444666666
Q ss_pred HHHHHHHHH
Q 033598 102 SLMRKSVED 110 (115)
Q Consensus 102 ~~l~~~~~~ 110 (115)
..++..++.
T Consensus 120 ~~i~~~~~~ 128 (147)
T 2zay_A 120 ARIKRVLKL 128 (147)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665553
No 248
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=91.30 E-value=0.27 Score=47.46 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=34.9
Q ss_pred HHHHhhCCCCcEEEEcCC-ChhhHHHHH-----------HcCCCEEEEcccccCC
Q 033598 52 RSLRNRYPSLDIEVDGGL-GPSTIAEAA-----------SAGANCIVAGSSVFGA 94 (115)
Q Consensus 52 ~~l~~~~~~~~i~~dGGI-~~~ni~~l~-----------~~Gad~iv~Gsaif~~ 94 (115)
.++++. .++|+.+.||| +.+.+.... ..|||.+++||++...
T Consensus 599 ~~ir~~-~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 599 SELRSR-SNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp HHHTTC-TTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred HHHhhc-CCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 666554 47999999998 678888888 9999999999997654
No 249
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=91.23 E-value=1.9 Score=27.43 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=49.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.. .++-++++++..++.|+.+. +.-+.+......++|++.++. +.-++.+-..
T Consensus 60 ~~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~ 127 (152)
T 3eul_A 60 HLPDVALLDYRMPGMD-------GAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLL-----KDSTRTEIVK 127 (152)
T ss_dssp HCCSEEEEETTCSSSC-------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE-----TTCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEe-----cCCCHHHHHH
Confidence 3688887655556533 45667788877778886654 455667777889999998744 4446666666
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..+.
T Consensus 128 ~i~~~~~ 134 (152)
T 3eul_A 128 AVLDCAK 134 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6665554
No 250
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=91.20 E-value=0.12 Score=40.91 Aligned_cols=74 Identities=9% Similarity=0.049 Sum_probs=45.9
Q ss_pred CCEEEEEeeeCCCCCcccchhH--HHHHHHHHhhCCCCcEEEEcCCChhh-HHHHHH----cCCCEEEEcccccCCCCHH
Q 033598 26 VEMVLVMTVEPGFGGQKFMPEM--MDKVRSLRNRYPSLDIEVDGGLGPST-IAEAAS----AGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 26 vD~vlvm~v~pG~~gq~~~~~~--~~ki~~l~~~~~~~~i~~dGGI~~~n-i~~l~~----~Gad~iv~Gsaif~~~d~~ 98 (115)
+|||-+.. +.+.++...+.. ...++.+++.. +.|+.+.||++.+. ..++++ .++|.+.+|++.+..+|..
T Consensus 280 l~ylhv~~--~~~~~~~~~~~~~~~~~~~~ir~~~-~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~ 356 (407)
T 3tjl_A 280 IAYISVVE--PRVSGNVDVSEEDQAGDNEFVSKIW-KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLV 356 (407)
T ss_dssp CSEEEEEC--TTEETTEECCGGGCCCCSHHHHHHC-CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHH
T ss_pred eeEEEEEc--cccCCCCcCCccchhHHHHHHHHHh-CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHH
Confidence 99998652 333222111100 01234445544 57999999999765 444433 5699999999998889876
Q ss_pred HHHH
Q 033598 99 HVIS 102 (115)
Q Consensus 99 ~~~~ 102 (115)
+.++
T Consensus 357 ~ri~ 360 (407)
T 3tjl_A 357 WKLR 360 (407)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 251
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=91.07 E-value=0.5 Score=35.73 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=50.0
Q ss_pred EEEecCCCCHHhHHHhHhCCCCCCEEEEEe---eeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHH
Q 033598 4 GVALKPGTSVEEVYPLVEGANPVEMVLVMT---VEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAAS 79 (115)
Q Consensus 4 Glal~p~t~~~~~~~~~~~~~~vD~vlvm~---v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~ 79 (115)
|+.....++ +..+.|-+ .++|-|.++. .+.-|.+.......++-|+++++.. ++|+.+.+++. .+.++.+.+
T Consensus 23 gv~~d~~~~-e~A~~ye~--~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~a 98 (297)
T 4adt_A 23 GVIMDVKNV-EQAKIAEK--AGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEE 98 (297)
T ss_dssp CEEEEESSH-HHHHHHHH--HTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHH
T ss_pred CcccCCCcH-HHHHHHHH--cCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHH
Confidence 444444444 54555542 5899998885 2233333222234567788888775 79999987776 777888899
Q ss_pred cCCCEE
Q 033598 80 AGANCI 85 (115)
Q Consensus 80 ~Gad~i 85 (115)
+|||.+
T Consensus 99 aGAD~I 104 (297)
T 4adt_A 99 LKVDML 104 (297)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 999998
No 252
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=91.02 E-value=1.5 Score=30.73 Aligned_cols=86 Identities=19% Similarity=0.171 Sum_probs=54.0
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEEcCCChhhHHHHHHcCCC
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVDGGLGPSTIAEAASAGAN 83 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~dGGI~~~ni~~l~~~Gad 83 (115)
-|.++.|.+.+...+.. ..+|.|.+-+..+. ..+...+-++++++.. +++++.+=|..-.+.+ ..+.|+|
T Consensus 121 ~LG~~vp~~~l~~~~~~-~~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~~--~~~~gad 192 (210)
T 1y80_A 121 NLGVDIEPGKFVEAVKK-YQPDIVGMSALLTT-----TMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQDF--ADEIGAD 192 (210)
T ss_dssp ECCSSBCHHHHHHHHHH-HCCSEEEEECCSGG-----GTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHHH--HHHHTCS
T ss_pred ECCCCCCHHHHHHHHHH-cCCCEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHHH--HHHcCCe
Confidence 36678889888777743 47999987554432 2344555567777654 4588777665443322 3567888
Q ss_pred EEEEcccccCCCCHHHHHHHHHHH
Q 033598 84 CIVAGSSVFGAPEPAHVISLMRKS 107 (115)
Q Consensus 84 ~iv~Gsaif~~~d~~~~~~~l~~~ 107 (115)
.+ .+|..++++..++.
T Consensus 193 ~~--------~~da~~av~~~~~l 208 (210)
T 1y80_A 193 GY--------APDAASATELCRQL 208 (210)
T ss_dssp EE--------CSSHHHHHHHHHHH
T ss_pred EE--------ECCHHHHHHHHHHH
Confidence 65 46766666655543
No 253
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.99 E-value=1.9 Score=27.08 Aligned_cols=73 Identities=5% Similarity=0.035 Sum_probs=47.6
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.|++-..-|+.. .++.++++++..++.|+.+..+ -+.+......++|++.++. +.-++.+-...
T Consensus 48 ~~dlvllD~~l~~~~-------g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~~ 115 (137)
T 3cfy_A 48 KPQLIILDLKLPDMS-------GEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLE-----KPINADRLKTS 115 (137)
T ss_dssp CCSEEEECSBCSSSB-------HHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHH
T ss_pred CCCEEEEecCCCCCC-------HHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEe-----CCCCHHHHHHH
Confidence 578887665556644 3455677777667777665554 4567778888999997744 44455555555
Q ss_pred HHHHHH
Q 033598 104 MRKSVE 109 (115)
Q Consensus 104 l~~~~~ 109 (115)
++..++
T Consensus 116 i~~~~~ 121 (137)
T 3cfy_A 116 VALHLK 121 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 254
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=90.94 E-value=1.7 Score=28.05 Aligned_cols=71 Identities=8% Similarity=0.078 Sum_probs=47.0
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.|++-.--|+.. .++.++++++..++.++.+. +--+.+....+.++|++.++. +.-++.+-...
T Consensus 83 ~~dliilD~~l~~~~-------g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~ 150 (157)
T 3hzh_A 83 NIDIVTLXITMPKMD-------GITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIV-----KPLDRAKVLQR 150 (157)
T ss_dssp GCCEEEECSSCSSSC-------HHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHH
T ss_pred CCCEEEEeccCCCcc-------HHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEe-----CCCCHHHHHHH
Confidence 578887655445533 45667788877778886654 456778888899999998743 44455555555
Q ss_pred HHHH
Q 033598 104 MRKS 107 (115)
Q Consensus 104 l~~~ 107 (115)
++..
T Consensus 151 i~~~ 154 (157)
T 3hzh_A 151 VMSV 154 (157)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5443
No 255
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=90.90 E-value=0.87 Score=36.15 Aligned_cols=67 Identities=27% Similarity=0.379 Sum_probs=42.8
Q ss_pred CCCEEEEEeeeCCCC-------Ccc-cchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccC
Q 033598 25 PVEMVLVMTVEPGFG-------GQK-FMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFG 93 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~-------gq~-~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~ 93 (115)
++|.|.+ ++-||.. |.. .....+..+.++.+.. ++|+.+||||. ...+...+.+|||.+-+|+.+..
T Consensus 287 G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 287 FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 7888877 4444431 110 0123344444444433 68999999986 45666677899999999998764
No 256
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=90.85 E-value=2 Score=27.05 Aligned_cols=89 Identities=11% Similarity=0.189 Sum_probs=55.6
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~G 88 (115)
.+..+.+..+.......|.|++-..-|+ ...++-++++++..+++|+.+..+ -+.+......++|++.+
T Consensus 52 ~~~~~~~~~~~~~~~~~dlvi~D~~l~~-------~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~--- 121 (146)
T 4dad_A 52 VGRAAQIVQRTDGLDAFDILMIDGAALD-------TAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDV--- 121 (146)
T ss_dssp CCCHHHHTTCHHHHTTCSEEEEECTTCC-------HHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEE---
T ss_pred CCHHHHHHHHHhcCCCCCEEEEeCCCCC-------ccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCcee---
Confidence 3444444444310034787776544454 245667788888778888665544 56777888889998876
Q ss_pred ccccCCCCHHHHHHHHHHHHHH
Q 033598 89 SSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 89 saif~~~d~~~~~~~l~~~~~~ 110 (115)
|.+.-++.+-...++..++.
T Consensus 122 --l~Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 122 --LRWPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp --EESSCCHHHHHHHHHHHHHT
T ss_pred --EcCCCCHHHHHHHHHHHHhh
Confidence 44545676666667666654
No 257
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=90.84 E-value=2 Score=27.10 Aligned_cols=74 Identities=18% Similarity=0.312 Sum_probs=42.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+..| ++-++++++..++.|+.+..+ -+.+......+.|++.+ |.+.-++.+-..
T Consensus 48 ~~~dlvllD~~lp~~~g-------~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~-----l~KP~~~~~L~~ 115 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDG-------IELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRY-----VEKPIDPSEIMD 115 (141)
T ss_dssp SCCSEEEEESCCSSSCH-------HHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEE-----ECSSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCCH-------HHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEE-----EeCCCCHHHHHH
Confidence 35898887655666443 455667777677888776655 44566777788998876 344446666555
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..+.
T Consensus 116 ~i~~~~~ 122 (141)
T 3cu5_A 116 ALKQSIQ 122 (141)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655544
No 258
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=90.78 E-value=0.79 Score=28.20 Aligned_cols=74 Identities=11% Similarity=0.037 Sum_probs=45.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-.--|+.+ .++-++++++. .+++|+.+..+ -+.+. ......|++.+ |.+.-++.+-
T Consensus 46 ~~~dlii~D~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~g~~~~-----l~KP~~~~~L 112 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTS-------GLALVKQLRALPMEKTSKFVAVSGFAKNDL-GKEACELFDFY-----LEKPIDIASL 112 (127)
T ss_dssp SCCSEEEEESBCSSSB-------HHHHHHHHHHSCCSSCCEEEEEECC-CTTC-CHHHHHHCSEE-----EESSCCHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHHhhhccCCCCEEEEECCcchhH-HHHHHHhhHHh-----eeCCCCHHHH
Confidence 4689888766666643 45567777776 56788766554 44444 66778888875 4444466666
Q ss_pred HHHHHHHHHH
Q 033598 101 ISLMRKSVED 110 (115)
Q Consensus 101 ~~~l~~~~~~ 110 (115)
.+.++.....
T Consensus 113 ~~~i~~~~~~ 122 (127)
T 3i42_A 113 EPILQSIEGH 122 (127)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHhhcc
Confidence 6556554443
No 259
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=90.66 E-value=2 Score=26.69 Aligned_cols=74 Identities=11% Similarity=0.182 Sum_probs=48.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.. .++.++++++..++.|+.+..+ -+.+......++||+.++. +.-++.+-..
T Consensus 46 ~~~dlvl~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~ 113 (132)
T 3crn_A 46 EFFNLALFXIKLPDME-------GTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIM-----KPVNPRDLLE 113 (132)
T ss_dssp SCCSEEEECSBCSSSB-------HHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEecCCCCCc-------hHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhcc-----CCCCHHHHHH
Confidence 4678887755556644 3455667777667788766555 4567778888999998854 4446666666
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 114 ~i~~~~~ 120 (132)
T 3crn_A 114 KIKEKLD 120 (132)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665544
No 260
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.66 E-value=2.6 Score=31.82 Aligned_cols=80 Identities=15% Similarity=0.168 Sum_probs=48.6
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCC--C--CcccchhHHHHHHHHHhhCCCCcEEEE---cCCChhhHHHHHH
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMTVEPGF--G--GQKFMPEMMDKVRSLRNRYPSLDIEVD---GGLGPSTIAEAAS 79 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~--~--gq~~~~~~~~ki~~l~~~~~~~~i~~d---GGI~~~ni~~l~~ 79 (115)
++.+...+.+...++. .++|+|-+-.-.|-. . +.......++.++++++.. ++|+.+- .|++.+.+..+.+
T Consensus 123 i~~~~~~~~~~~~~~~-~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~-~~Pv~vK~~~~~~~~~~a~~a~~ 200 (349)
T 1p0k_A 123 LGSEATAAQAKEAVEM-IGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV-SVPVIVKEVGFGMSKASAGKLYE 200 (349)
T ss_dssp EETTCCHHHHHHHHHH-TTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC-SSCEEEEEESSCCCHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHh-cCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc-CCCEEEEecCCCCCHHHHHHHHH
Confidence 4433444545554433 458887543332211 1 1111112566788888764 6888874 4489999999999
Q ss_pred cCCCEEEEc
Q 033598 80 AGANCIVAG 88 (115)
Q Consensus 80 ~Gad~iv~G 88 (115)
+|+|.+++.
T Consensus 201 ~Gad~I~v~ 209 (349)
T 1p0k_A 201 AGAAAVDIG 209 (349)
T ss_dssp HTCSEEEEE
T ss_pred cCCCEEEEc
Confidence 999999985
No 261
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=90.65 E-value=1.2 Score=32.47 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=45.8
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
-|.+++|.+.+...+.. ..+|.|.+-+..+.. .+...+-++++++..+++++.+=|..-.+.+. .+.|+|.+
T Consensus 156 ~LG~~vp~e~l~~~~~~-~~~d~V~lS~l~~~~-----~~~~~~~i~~l~~~~~~~~v~vGG~~~~~~~~--~~igad~~ 227 (258)
T 2i2x_B 156 DLGRDVPAEEVLAAVQK-EKPIMLTGTALMTTT-----MYAFKEVNDMLLENGIKIPFACGGGAVNQDFV--SQFALGVY 227 (258)
T ss_dssp EEEEECCSHHHHHHHHH-HCCSEEEEECCCTTT-----TTHHHHHHHHHHTTTCCCCEEEESTTCCHHHH--HTSTTEEE
T ss_pred ECCCCCCHHHHHHHHHH-cCCCEEEEEeeccCC-----HHHHHHHHHHHHhcCCCCcEEEECccCCHHHH--HHcCCeEE
Confidence 35566788777666533 478999876554431 23455557788877777888887765444333 36788766
No 262
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=90.61 E-value=2 Score=26.66 Aligned_cols=75 Identities=9% Similarity=0.107 Sum_probs=51.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-.--|+.. .++-++++++..++.|+.+..+ -+.+......++|++.+ +.+.-++.+-..
T Consensus 50 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~-----l~kP~~~~~l~~ 117 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLG-------GLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLF-----LPKPIEPGRLME 117 (137)
T ss_dssp HCCSEEEECSSCSSSC-------HHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEE-----CCSSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCccee-----EcCCCCHHHHHH
Confidence 3578887654445533 4566778888778888776655 45667778899999976 445457776666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 118 ~i~~~~~~ 125 (137)
T 3hdg_A 118 TLEDFRHI 125 (137)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67666654
No 263
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=90.58 E-value=2.5 Score=28.85 Aligned_cols=82 Identities=18% Similarity=0.268 Sum_probs=50.4
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCC--CcEEEEcCCChhhHHHHHHcCC
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPS--LDIEVDGGLGPSTIAEAASAGA 82 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~--~~i~~dGGI~~~ni~~l~~~Ga 82 (115)
++....++.+.++.+.+ ..+|.+++-..-|+.+| ++.++++++..+. +|+.+.++ ..+......+.|+
T Consensus 7 ~v~~~~~~~~a~~~~~~--~~~dlvl~D~~~p~~~g-------~~~~~~l~~~~~~~~i~vi~~~~-~~~~~~~~~~~Ga 76 (237)
T 3cwo_X 7 IVDDATNGREAVEKYKE--LKPDIVTMDITMPEMNG-------IDAIKEIMKIDPNAKIIVCSAMG-QQAMVIEAIKAGA 76 (237)
T ss_dssp EEECCCSSSTTHHHHHH--HCCSCEEEECCSTTSSH-------HHHHHHHHHHSSSCCEEEECCSS-THHHHHHHHHTTC
T ss_pred EEEECCCHHHHHHHHHh--cCCCEEEEeCCCCCCCH-------HHHHHHHHHhCCCCCEEEEECCC-CHHHHHHHHHCCH
Confidence 34445555555555441 35797776555576444 4456666655443 55554444 4888899999999
Q ss_pred CEEEEcccccCCCC
Q 033598 83 NCIVAGSSVFGAPE 96 (115)
Q Consensus 83 d~iv~Gsaif~~~d 96 (115)
+.++....-|..+.
T Consensus 77 ~~~l~kp~~~~~~~ 90 (237)
T 3cwo_X 77 KDFIVNTAAVENPS 90 (237)
T ss_dssp CEEEESHHHHHCTH
T ss_pred HheEeCCcccChHH
Confidence 99988765444333
No 264
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=90.56 E-value=1.8 Score=26.10 Aligned_cols=75 Identities=21% Similarity=0.117 Sum_probs=48.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+.. .++.++++++..++.|+.+. +.-+.+......++|++.++. +.-++.+-..
T Consensus 43 ~~~dlil~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~ 110 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDED-------GLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT-----KPFHIEEVMA 110 (121)
T ss_dssp SCCSEEEECSCCSSSC-------HHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred cCCCEEEEecCCCCCC-------HHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEE-----CCCCHHHHHH
Confidence 4578887654455533 34557777776667786655 445667778888999998754 4446666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 111 ~i~~~~~~ 118 (121)
T 2pl1_A 111 RMQALMRR 118 (121)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66655543
No 265
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=90.51 E-value=0.87 Score=32.51 Aligned_cols=85 Identities=18% Similarity=0.097 Sum_probs=52.2
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEE--EeeeCCCCCcccchhHHHHHHHHHhhCC--CCcEEEEcCCChhhHHHHHHcC
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLV--MTVEPGFGGQKFMPEMMDKVRSLRNRYP--SLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~gq~~~~~~~~ki~~l~~~~~--~~~i~~dGGI~~~ni~~l~~~G 81 (115)
-|.+++|.+.+...+.. ..+|.|.+ -+.... -.+...+-++++++... ++++.+=|..-.+.+ ..+.|
T Consensus 125 ~LG~~vp~e~iv~~~~~-~~~d~v~l~~S~l~~~-----~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~~~--a~~iG 196 (215)
T 3ezx_A 125 DLGVDVLNENVVEEAAK-HKGEKVLLVGSALMTT-----SMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSDKW--IEEIG 196 (215)
T ss_dssp ECCSSCCHHHHHHHHHH-TTTSCEEEEEECSSHH-----HHTHHHHHHHHHHHTTCGGGSEEEEESSSCCHHH--HHHHT
T ss_pred EcCCCCCHHHHHHHHHH-cCCCEEEEEchhcccC-----cHHHHHHHHHHHHHcCCCCCCEEEEECCCCCHHH--HHHhC
Confidence 46788999888666644 68999986 332221 12334455677777654 688888777443332 23458
Q ss_pred CCEEEEcccccCCCCHHHHHHHHHH
Q 033598 82 ANCIVAGSSVFGAPEPAHVISLMRK 106 (115)
Q Consensus 82 ad~iv~Gsaif~~~d~~~~~~~l~~ 106 (115)
||.. ++|..++++..++
T Consensus 197 ad~~--------~~dA~~av~~a~~ 213 (215)
T 3ezx_A 197 ADAT--------AENAAEAAKVALE 213 (215)
T ss_dssp CCBC--------CSSHHHHHHHHHH
T ss_pred CeEE--------ECCHHHHHHHHHH
Confidence 8755 5677766665543
No 266
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=90.37 E-value=2.2 Score=26.69 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=49.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.. .++-++++++..+++|+.+ .+.-+.+......++|++.++. +.-++.+-..
T Consensus 48 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~ 115 (143)
T 3jte_A 48 NSIDVVITDMKMPKLS-------GMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLR-----KPVTAQDLSI 115 (143)
T ss_dssp TTCCEEEEESCCSSSC-------HHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCc-------HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEe-----CCCCHHHHHH
Confidence 4689888765556533 4556777777777788665 4455667788899999998744 3345555555
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 116 ~l~~~~~ 122 (143)
T 3jte_A 116 AINNAIN 122 (143)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655544
No 267
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=90.33 E-value=0.16 Score=37.90 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=36.6
Q ss_pred CCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCCC--CHHHHH
Q 033598 60 SLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGAP--EPAHVI 101 (115)
Q Consensus 60 ~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~~--d~~~~~ 101 (115)
+++|.-=|+++++|+.++. +.++|++-+|++..+++ ++.+-+
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASLka~~~~F~~ii 250 (255)
T 1b9b_A 206 SIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKESFIELARIM 250 (255)
T ss_dssp HSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTSTHHHHHHHHH
T ss_pred cceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhhcCccccHHHHH
Confidence 4889999999999999986 89999999999999877 665544
No 268
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=90.22 E-value=0.34 Score=34.50 Aligned_cols=55 Identities=22% Similarity=0.361 Sum_probs=39.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEccc-ccC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSS-VFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsa-if~ 93 (115)
.+.|++-+| || ...|.. ++++ .+.|+.+-|+|+ +|.+.. +++|||.++.+.- +|.
T Consensus 127 ~kPD~iEiL---Pg----~v~p~~---I~~v----~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 127 LGVDVVEVL---PG----AVAPKV---ARKI----PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp HTCSEEEEE---SG----GGHHHH---HTTS----TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred cCCCeEeec---CC----CchHHH---HHHh----cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 468998888 55 112333 3333 478999999996 678888 9999999999943 775
No 269
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.03 E-value=1.3 Score=33.85 Aligned_cols=73 Identities=23% Similarity=0.265 Sum_probs=45.7
Q ss_pred HhHHHhHhCCCCCCEEEEEe--eeCCCCCcccchhHHHH----HHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 14 EEVYPLVEGANPVEMVLVMT--VEPGFGGQKFMPEMMDK----VRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~~~~~~~k----i~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.+++ .++|+|=|.+ ..|| ..-. .++-+++ |+.+++..+++||++|=- +++.++..+++|+|+|--
T Consensus 69 ~~A~~~v~--~GAdIIDIGgeSTrPG-~~v~-~~eEl~Rv~pvI~~l~~~~~~vpISIDT~-~~~VaeaAl~aGa~iIND 143 (318)
T 2vp8_A 69 DAVHRAVA--DGADVIDVGGVKAGPG-ERVD-VDTEITRLVPFIEWLRGAYPDQLISVDTW-RAQVAKAACAAGADLIND 143 (318)
T ss_dssp HHHHHHHH--TTCSEEEEC-----------C-HHHHHHHHHHHHHHHHHHSTTCEEEEECS-CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH--CCCCEEEECCCcCCCC-CCCC-HHHHHHHHHHHHHHHHhhCCCCeEEEeCC-CHHHHHHHHHhCCCEEEE
Confidence 34444552 6899998774 4577 3322 1233333 566666656899999976 899999999999998877
Q ss_pred cccc
Q 033598 88 GSSV 91 (115)
Q Consensus 88 Gsai 91 (115)
.|+.
T Consensus 144 Vsg~ 147 (318)
T 2vp8_A 144 TWGG 147 (318)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 7765
No 270
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=90.02 E-value=2.5 Score=26.86 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=47.4
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcC-CCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAG-ANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~~~~~ 102 (115)
.+|.|++-.--|+.. .++-++++++..++.|+.+ .+.-+.+......+.| ++.++. +.-++.+-..
T Consensus 48 ~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~-----KP~~~~~L~~ 115 (151)
T 3kcn_A 48 PFSVIMVDMRMPGME-------GTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLN-----KPCQMSDIKA 115 (151)
T ss_dssp CCSEEEEESCCSSSC-------HHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEE-----SSCCHHHHHH
T ss_pred CCCEEEEeCCCCCCc-------HHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEc-----CCCCHHHHHH
Confidence 369888766566644 4556777777777888665 4555667777888899 887743 4345555555
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 116 ~i~~~l~ 122 (151)
T 3kcn_A 116 AINAGIK 122 (151)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 271
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.89 E-value=2.6 Score=30.75 Aligned_cols=65 Identities=11% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCCEEEEEee--eCCCCCcccc-------------hhHHHHHHHHHhhCCCCcEEEEcCCC-------hhhHHHHHHcC
Q 033598 24 NPVEMVLVMTV--EPGFGGQKFM-------------PEMMDKVRSLRNRYPSLDIEVDGGLG-------PSTIAEAASAG 81 (115)
Q Consensus 24 ~~vD~vlvm~v--~pG~~gq~~~-------------~~~~~ki~~l~~~~~~~~i~~dGGI~-------~~ni~~l~~~G 81 (115)
.++|.|-+..- .|-.+|.... ...++-++++|+..|++|+.+.|=.| .+-++.+.++|
T Consensus 43 ~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG 122 (262)
T 2ekc_A 43 NGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKG 122 (262)
T ss_dssp TTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTT
T ss_pred cCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcC
Confidence 47999987431 2222332221 23456688888876689998876555 34457789999
Q ss_pred CCEEEEc
Q 033598 82 ANCIVAG 88 (115)
Q Consensus 82 ad~iv~G 88 (115)
+|++++.
T Consensus 123 ~dgvii~ 129 (262)
T 2ekc_A 123 IDGFIVP 129 (262)
T ss_dssp CCEEECT
T ss_pred CCEEEEC
Confidence 9988775
No 272
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=89.75 E-value=2.3 Score=26.08 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=36.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
...|.|++-..-|+.. .++-++++++..++.|+. +.+.-+.+......+.|++.++.
T Consensus 50 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~ 107 (130)
T 3eod_A 50 FTPDLMICDIAMPRMN-------GLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLL 107 (130)
T ss_dssp CCCSEEEECCC------------CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEecCCCCCC-------HHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEe
Confidence 4688887655556543 345567777777777765 45556677778889999998743
No 273
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=89.64 E-value=0.44 Score=34.94 Aligned_cols=74 Identities=15% Similarity=0.234 Sum_probs=41.4
Q ss_pred CCCCCCEEEEEeee--CCCCCcccchhHHHHHHHHHhh----CCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCC
Q 033598 22 GANPVEMVLVMTVE--PGFGGQKFMPEMMDKVRSLRNR----YPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 22 ~~~~vD~vlvm~v~--pG~~gq~~~~~~~~ki~~l~~~----~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~ 95 (115)
..+.+...++|+.. |-.+........++++.++++. .+.++ .+..|.+.+ .+...+.|.|.+=+|++||...
T Consensus 170 ~~~~L~l~Glmth~~~~~ad~~~~~~~~f~~~~~~~~~l~~~~~~~~-~lS~Gms~d-~~~ai~~g~t~VR~G~~lfG~~ 247 (256)
T 1ct5_A 170 ECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSL-KLSMGMSAD-FREAIRQGTAEVRIGTDIFGAR 247 (256)
T ss_dssp TCCSEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCC-EEECCCTTT-HHHHHHTTCSEEEESHHHHC--
T ss_pred cCCCeeEEEEEEECCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC-EEEecccHh-HHHHHHcCCCEEEecHHHhCCC
Confidence 44788999999887 4322222233455555544322 12233 447777654 4555678999999999999865
Q ss_pred CH
Q 033598 96 EP 97 (115)
Q Consensus 96 d~ 97 (115)
++
T Consensus 248 ~~ 249 (256)
T 1ct5_A 248 PP 249 (256)
T ss_dssp --
T ss_pred cC
Confidence 54
No 274
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=89.60 E-value=1.6 Score=39.81 Aligned_cols=87 Identities=18% Similarity=0.164 Sum_probs=51.2
Q ss_pred EEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCccc------chhHHHHHHHHHhh------CCCCcEEEEcCCC-
Q 033598 4 GVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKF------MPEMMDKVRSLRNR------YPSLDIEVDGGLG- 70 (115)
Q Consensus 4 Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~------~~~~~~ki~~l~~~------~~~~~i~~dGGI~- 70 (115)
++-+.+..........+.+ .++|.|.+-....|.++... ...+..-|.++++. ..++|+.++|||.
T Consensus 1032 ~VKlv~~~gi~~~A~~a~k-AGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrt 1110 (1520)
T 1ofd_A 1032 SVKLVAEIGIGTIAAGVAK-ANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKT 1110 (1520)
T ss_dssp EEEEECSTTHHHHHHHHHH-TTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCS
T ss_pred EEEecCCCChHHHHHHHHH-cCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCC
Confidence 4444444333333333322 58999987554444322211 01122334444331 2369999999996
Q ss_pred hhhHHHHHHcCCCEEEEcccc
Q 033598 71 PSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 71 ~~ni~~l~~~Gad~iv~Gsai 91 (115)
...+...+..|||.+-+|++.
T Consensus 1111 G~DVakALaLGAdaV~iGTaf 1131 (1520)
T 1ofd_A 1111 GWDVVMAALMGAEEYGFGSIA 1131 (1520)
T ss_dssp HHHHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHHHcCCCeeEEcHHH
Confidence 677778889999999999874
No 275
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=89.54 E-value=0.68 Score=34.78 Aligned_cols=72 Identities=18% Similarity=0.263 Sum_probs=50.3
Q ss_pred EEEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCC
Q 033598 30 LVMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGA 94 (115)
Q Consensus 30 lvm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~ 94 (115)
++++-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.++ .+.++|++-+|++..++
T Consensus 179 vvIAYEPvWAIG-TGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka 257 (275)
T 1mo0_A 179 IVIAYEPVWAIG-TGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKP 257 (275)
T ss_dssp EEEEECCGGGTT-TSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGST
T ss_pred EEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhCh
Confidence 3456777 4 45555544444433 3332 22 2488999999999999987 67899999999999988
Q ss_pred CCHHHHHH
Q 033598 95 PEPAHVIS 102 (115)
Q Consensus 95 ~d~~~~~~ 102 (115)
+++.+-++
T Consensus 258 ~~F~~Ii~ 265 (275)
T 1mo0_A 258 DFVKIINA 265 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765544
No 276
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=89.51 E-value=0.79 Score=33.57 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=48.7
Q ss_pred CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHH
Q 033598 23 ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 23 ~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~ 98 (115)
.+.+...++|+..|-..... ..+.+++++++.. ++ -.+.+|.|.+- ....+.|++.+=+|++||...++.
T Consensus 156 l~~L~l~GlmTh~a~~dd~~---~~f~~l~~l~~~l-~~-~~lSmGmS~d~-~~Ai~~G~t~vRvGtaIfg~r~~~ 225 (244)
T 3r79_A 156 ELKLPVEGLMCIPPAEENPG---PHFALLAKLAGQC-GL-EKLSMGMSGDF-ETAVEFGATSVRVGSAIFGSRAEN 225 (244)
T ss_dssp TSCCCCCEEECCCCTTSCSH---HHHHHHHHHHHHH-TC-CEEECCCTTTH-HHHHHTTCSEEEECHHHHCCHHHH
T ss_pred CCCCEEEEEEecCCCCCCHH---HHHHHHHHHHHhC-CC-CEEEeecchhH-HHHHHcCCCEEEeeHHHhCCCchh
Confidence 47899999998655332221 5667777777653 23 36788876654 445689999999999999865443
No 277
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=89.49 E-value=0.65 Score=35.21 Aligned_cols=56 Identities=18% Similarity=0.354 Sum_probs=40.9
Q ss_pred CCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc-CCChhhHHHHHHcCCCEEEEc
Q 033598 26 VEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG-GLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 26 vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~G 88 (115)
+|++.+ +... | ......+.++++++..+..++. .| ..+.+....+.++|||.++++
T Consensus 121 ~~~i~i---~~~~-G--~~~~~~~~i~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 121 PEYITI---DIAH-G--HSNAVINMIQHIKKHLPESFVI-AGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp CSEEEE---ECSS-C--CSHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEE---ECCC-C--CcHHHHHHHHHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEEe
Confidence 888754 3332 2 3345677888888886555444 56 678999999999999999994
No 278
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=89.42 E-value=2.8 Score=26.64 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-.--|+.. .++-++++++..+++|+.+..+ -+.+......+.|++.++.- .-++.+-..
T Consensus 46 ~~~dliild~~l~~~~-------g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~k-----P~~~~~L~~ 113 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMD-------GLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAK-----PFAADRLVQ 113 (155)
T ss_dssp TCCSEEEEESCCSSSC-------HHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEES-----SCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeC-----CCCHHHHHH
Confidence 3578887655555533 4455777777777888776655 45567778889999987543 334444444
Q ss_pred HHHHH
Q 033598 103 LMRKS 107 (115)
Q Consensus 103 ~l~~~ 107 (115)
.++..
T Consensus 114 ~i~~~ 118 (155)
T 1qkk_A 114 SARRA 118 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 279
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=89.28 E-value=0.57 Score=34.76 Aligned_cols=70 Identities=17% Similarity=0.280 Sum_probs=46.7
Q ss_pred EEeeeCCC---CCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCCCC
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGAPE 96 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~~d 96 (115)
+++-+|-. +|....++..+.+. .+|+ .+ .+++|.-=|+++++|+.++. +.++|++-+|++-.+.++
T Consensus 166 vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~~~ 245 (254)
T 3m9y_A 166 VIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVED 245 (254)
T ss_dssp EEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHH
T ss_pred EEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhhCHHH
Confidence 34667722 55555555444422 2232 22 36899999999999999987 899999999999887655
Q ss_pred HHHH
Q 033598 97 PAHV 100 (115)
Q Consensus 97 ~~~~ 100 (115)
..+-
T Consensus 246 F~~I 249 (254)
T 3m9y_A 246 FVQL 249 (254)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 280
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=89.28 E-value=5.4 Score=33.74 Aligned_cols=91 Identities=15% Similarity=0.049 Sum_probs=55.7
Q ss_pred cCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcC-CChhhHHHHHHcCCCEE
Q 033598 8 KPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGG-LGPSTIAEAASAGANCI 85 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGG-I~~~ni~~l~~~Gad~i 85 (115)
....|.+.+.+...+ .++|.|.+-+...++. +...+-++.|++... ++ ..+.|| +-.+....+.+.|+|.+
T Consensus 631 G~~v~~eeiv~aA~e-~~adiVglSsl~~~~~-----~~~~~vi~~L~~~G~~~i-~VivGG~~p~~d~~~l~~~GaD~~ 703 (727)
T 1req_A 631 PLFQTPEETARQAVE-ADVHVVGVSSLAGGHL-----TLVPALRKELDKLGRPDI-LITVGGVIPEQDFDELRKDGAVEI 703 (727)
T ss_dssp CTTBCHHHHHHHHHH-TTCSEEEEEECSSCHH-----HHHHHHHHHHHHTTCTTS-EEEEEESCCGGGHHHHHHTTEEEE
T ss_pred CCCCCHHHHHHHHHH-cCCCEEEEeeecHhHH-----HHHHHHHHHHHhcCCCCC-EEEEcCCCccccHHHHHhCCCCEE
Confidence 344555544444433 6899998765544322 233344566666654 44 455666 55556788899999987
Q ss_pred EEcccccCCCCHHHHHHHHHHHHHH
Q 033598 86 VAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 86 v~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
.. ...+..+.++.+.+.++.
T Consensus 704 f~-----~gt~~~e~a~~l~~~l~~ 723 (727)
T 1req_A 704 YT-----PGTVIPESAISLVKKLRA 723 (727)
T ss_dssp EC-----TTCCHHHHHHHHHHHHHH
T ss_pred Ec-----CCccHHHHHHHHHHHHHH
Confidence 43 235777888888777754
No 281
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=89.20 E-value=2.1 Score=26.67 Aligned_cols=73 Identities=11% Similarity=0.154 Sum_probs=46.5
Q ss_pred CCCEEEEEeeeC-CCCCcccchhHHHHHHHHHh--hCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 25 PVEMVLVMTVEP-GFGGQKFMPEMMDKVRSLRN--RYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 25 ~vD~vlvm~v~p-G~~gq~~~~~~~~ki~~l~~--~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
..|.|++-.--| + ...++-++++++ ..+++|+.+. +--+.+......++|++.++. +.-++.+-
T Consensus 50 ~~dlvi~D~~l~~~-------~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l 117 (140)
T 3lua_A 50 SITLIIMDIAFPVE-------KEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYIL-----KPYPTKRL 117 (140)
T ss_dssp CCSEEEECSCSSSH-------HHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEE-----SSCCTTHH
T ss_pred CCcEEEEeCCCCCC-------CcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE-----CCCCHHHH
Confidence 478887644444 3 245666788887 5677886655 445678888899999998754 33344444
Q ss_pred HHHHHHHHH
Q 033598 101 ISLMRKSVE 109 (115)
Q Consensus 101 ~~~l~~~~~ 109 (115)
...++..++
T Consensus 118 ~~~i~~~~~ 126 (140)
T 3lua_A 118 ENSVRSVLK 126 (140)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 444555443
No 282
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=89.04 E-value=4.9 Score=30.26 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=43.5
Q ss_pred CCCCEEEEE--eeeCCCCCcccchhH---HHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccc
Q 033598 24 NPVEMVLVM--TVEPGFGGQKFMPEM---MDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 24 ~~vD~vlvm--~v~pG~~gq~~~~~~---~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++|+|=|. +..||.....-.++. ..-|+.+++.. ++||.+|.- +++.++..+++|++++--.|+.
T Consensus 75 ~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~-~~~V~~aAl~aGa~iINdvsg~ 145 (297)
T 1tx2_A 75 EGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTY-KAEVAKQAIEAGAHIINDIWGA 145 (297)
T ss_dssp TTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECS-CHHHHHHHHHHTCCEEEETTTT
T ss_pred cCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 689999888 466886544433222 22235555443 799999986 8999999999999999777664
No 283
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=89.00 E-value=2.6 Score=25.62 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=46.6
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.+++-..-|+..| ++-++++++..++.|+.+..+ -+.+......+.|++.++ .+.-++.+-...
T Consensus 47 ~~dlvl~D~~l~~~~g-------~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~ 114 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDG-------IEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHF-----AKPFDIDEIRDA 114 (124)
T ss_dssp CCSEEEEESCCTTCCH-------HHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEE-----ESSCCHHHHHHH
T ss_pred CCCEEEEecCCCCCCH-------HHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhc-----cCCCCHHHHHHH
Confidence 5788887655666443 445667776667888766554 456677788899998764 344466555555
Q ss_pred HHHHH
Q 033598 104 MRKSV 108 (115)
Q Consensus 104 l~~~~ 108 (115)
++..+
T Consensus 115 i~~~~ 119 (124)
T 1srr_A 115 VKKYL 119 (124)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 55443
No 284
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=88.96 E-value=2.9 Score=26.10 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=47.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
...|.|++-.--|+.. .++-++++++..+..++.+..+- .+......+.|++.++. +.-++.+-...
T Consensus 54 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~ 120 (143)
T 2qv0_A 54 NKVDAIFLDINIPSLD-------GVLLAQNISQFAHKPFIVFITAW-KEHAVEAFELEAFDYIL-----KPYQESRIINM 120 (143)
T ss_dssp CCCSEEEECSSCSSSC-------HHHHHHHHTTSTTCCEEEEEESC-CTTHHHHHHTTCSEEEE-----SSCCHHHHHHH
T ss_pred CCCCEEEEecCCCCCC-------HHHHHHHHHccCCCceEEEEeCC-HHHHHHHHhCCcceEEe-----CCCCHHHHHHH
Confidence 4578887654445432 45567777776666777766665 45677788999987743 43456665566
Q ss_pred HHHHHHHH
Q 033598 104 MRKSVEDA 111 (115)
Q Consensus 104 l~~~~~~~ 111 (115)
++..+..+
T Consensus 121 i~~~~~~~ 128 (143)
T 2qv0_A 121 LQKLTTAW 128 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 285
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=88.86 E-value=4.7 Score=28.49 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=54.6
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
.+..+.++.+- . ..+|.|++-..-|+.+| ++-++++++..+++||.+ .+.-+.+....+.++|++.++
T Consensus 160 ~~~~eal~~l~-~-~~~dlvl~D~~mp~~~G-------~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l-- 228 (254)
T 2ayx_A 160 NDGVDALNVLS-K-NHIDIVLSDVNMPNMDG-------YRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCL-- 228 (254)
T ss_dssp CCSHHHHHHHH-H-SCCSEEEEEESSCSSCC-------HHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEE--
T ss_pred CCHHHHHHHHH-h-CCCCEEEEcCCCCCCCH-------HHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCceEE--
Confidence 34455555443 2 45898887766677554 344566666556778665 455567788889999998774
Q ss_pred ccccCCCCHHHHHHHHHHHHHH
Q 033598 89 SSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 89 saif~~~d~~~~~~~l~~~~~~ 110 (115)
.+.-++.+-...++..+..
T Consensus 229 ---~KP~~~~~L~~~l~~~~~~ 247 (254)
T 2ayx_A 229 ---SKPVTLDVIKQTLTLYAER 247 (254)
T ss_dssp ---ESSCCHHHHHHHHHHHHHH
T ss_pred ---ECCCCHHHHHHHHHHHHHH
Confidence 3444555555555555543
No 286
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=88.75 E-value=0.41 Score=35.68 Aligned_cols=72 Identities=19% Similarity=0.336 Sum_probs=50.2
Q ss_pred EEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCCC
Q 033598 31 VMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 31 vm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~~ 95 (115)
+++-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.++ .+.++|++-+|++.++++
T Consensus 160 vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 238 (259)
T 2i9e_A 160 VIAYEPVWAIG-TGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPE 238 (259)
T ss_dssp EEEECCGGGTT-SSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred EEEEcCHHHcC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChH
Confidence 556777 4 45555544444332 3332 11 2488999999999999986 568999999999999888
Q ss_pred CHHHHHHH
Q 033598 96 EPAHVISL 103 (115)
Q Consensus 96 d~~~~~~~ 103 (115)
++.+-++.
T Consensus 239 ~F~~Ii~~ 246 (259)
T 2i9e_A 239 FVDIINAR 246 (259)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHH
Confidence 77665543
No 287
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=88.67 E-value=2.2 Score=26.28 Aligned_cols=74 Identities=20% Similarity=0.181 Sum_probs=45.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-.--|+.. .++-++++++..++.|+.+ .+.-+.+......+.|++.++.=. -++.+-..
T Consensus 45 ~~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp-----~~~~~l~~ 112 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVN-------GIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKK-----EGMNNIIA 112 (134)
T ss_dssp HCCSEEEEETTCSSSC-------HHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGG-----GCTHHHHH
T ss_pred cCCCEEEEecCCCCCC-------hHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCC-----CCHHHHHH
Confidence 3578887655556533 4566778887777887665 455666778888999999875532 24444444
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 113 ~i~~~~~ 119 (134)
T 3f6c_A 113 AIEAAKN 119 (134)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 4554443
No 288
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=88.63 E-value=2.9 Score=25.80 Aligned_cols=73 Identities=14% Similarity=0.208 Sum_probs=48.7
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
.+|.|++-.--|+.. .++-++++++. .++.|+.+ .+.-+.+......++|++.++. +.-++.+-..
T Consensus 52 ~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~ 119 (136)
T 3hdv_A 52 RIGLMITDLRMQPES-------GLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLL-----KPVDLGKLLE 119 (136)
T ss_dssp TEEEEEECSCCSSSC-------HHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred CCcEEEEeccCCCCC-------HHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEe-----CCCCHHHHHH
Confidence 378777655556543 45667778776 57777665 5556677888899999998744 4446666666
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.+++...
T Consensus 120 ~i~~~~~ 126 (136)
T 3hdv_A 120 LVNKELK 126 (136)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 6665554
No 289
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=88.59 E-value=2.5 Score=25.43 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=45.8
Q ss_pred CCCEEEEEeeeC-CCCCcccchhHHHHHHHHHhh--CCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEP-GFGGQKFMPEMMDKVRSLRNR--YPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~p-G~~gq~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.+++-.--| +.. .++-++++++. .++.|+.+.+.-+.+......+.|++.++. +.-++.+-.
T Consensus 49 ~~dlvi~d~~~~~~~~-------g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~ 116 (127)
T 2gkg_A 49 RPDLVVLAVDLSAGQN-------GYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVA-----KPVDADQLV 116 (127)
T ss_dssp CCSEEEEESBCGGGCB-------HHHHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEEE-----SSCCHHHHH
T ss_pred CCCEEEEeCCCCCCCC-------HHHHHHHHhcCccccCCCEEEEecCCchhHHHHHHhCcchhee-----CCCCHHHHH
Confidence 578887655445 322 45567777766 567887766666677778888999987743 434555555
Q ss_pred HHHHHH
Q 033598 102 SLMRKS 107 (115)
Q Consensus 102 ~~l~~~ 107 (115)
..++..
T Consensus 117 ~~i~~~ 122 (127)
T 2gkg_A 117 ERAGAL 122 (127)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 290
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=88.53 E-value=3.1 Score=25.91 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=47.5
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
..|.|++-..-|+.+| ++-++++++. .++.|+.+ .+.-+.+......++||+.++. +.-++.+-..
T Consensus 52 ~~dlvllD~~mp~~~G-------~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~ 119 (133)
T 2r25_B 52 NYNMIFMDVQMPKVDG-------LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLS-----KPIKRPKLKT 119 (133)
T ss_dssp CCSEEEECSCCSSSCH-------HHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEE-----SSCCHHHHHH
T ss_pred CCCEEEEeCCCCCCCh-------HHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEe-----CCCCHHHHHH
Confidence 4788887666677554 4556677653 44667665 4555677788889999998743 4445665555
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.+++.+..
T Consensus 120 ~l~~~~~~ 127 (133)
T 2r25_B 120 ILTEFCAA 127 (133)
T ss_dssp HHHHHCTT
T ss_pred HHHHHHHh
Confidence 55555443
No 291
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=88.48 E-value=2.1 Score=33.07 Aligned_cols=71 Identities=18% Similarity=0.166 Sum_probs=49.6
Q ss_pred cCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE---------------EcCCCh
Q 033598 8 KPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV---------------DGGLGP 71 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~---------------dGGI~~ 71 (115)
+|...-|.+.+..-| ..++|+|+ |.||.. -++-|+++++..|++|+.+ -|=++.
T Consensus 238 dpaN~~EAlre~~~Di~EGAD~vM---VKPal~-------YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~ 307 (342)
T 1h7n_A 238 PPAGRGLARRALERDMSEGADGII---VKPSTF-------YLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDL 307 (342)
T ss_dssp CTTCHHHHHHHHHHHHHTTCSEEE---EESSGG-------GHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCH
T ss_pred CCCCHHHHHHHHHhhHHhCCCeEE---EecCcc-------HHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHcCCccH
Confidence 455555666554433 26899997 788732 3667888888888899875 345554
Q ss_pred -----hhHHHHHHcCCCEEEEc
Q 033598 72 -----STIAEAASAGANCIVAG 88 (115)
Q Consensus 72 -----~ni~~l~~~Gad~iv~G 88 (115)
|.+-.++.+|||+|+.=
T Consensus 308 ~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 308 KTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp HHHHHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHHHHHHHhcCCCEEEee
Confidence 56667899999999754
No 292
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=88.47 E-value=0.81 Score=33.89 Aligned_cols=71 Identities=28% Similarity=0.450 Sum_probs=49.7
Q ss_pred EEEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCC
Q 033598 30 LVMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGA 94 (115)
Q Consensus 30 lvm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~ 94 (115)
+++.-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.++ .+.++|++-+|++.++
T Consensus 163 ~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~- 240 (251)
T 2vxn_A 163 VVLAYEPVWAIG-TGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLK- 240 (251)
T ss_dssp EEEEECCGGGSS-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-
T ss_pred EEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH-
Confidence 4457777 4 45555544444433 2332 22 2488999999999999986 6789999999999998
Q ss_pred CCHHHHHH
Q 033598 95 PEPAHVIS 102 (115)
Q Consensus 95 ~d~~~~~~ 102 (115)
+++.+-++
T Consensus 241 ~~F~~Ii~ 248 (251)
T 2vxn_A 241 PEFRDIID 248 (251)
T ss_dssp TTHHHHHH
T ss_pred HHHHHHHH
Confidence 88866543
No 293
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=88.41 E-value=0.47 Score=34.73 Aligned_cols=62 Identities=18% Similarity=0.238 Sum_probs=40.7
Q ss_pred CCCCEEEEEeeeCCCCC-cccchhHHHHHHH--HHhhCCCCcEEEEcCCC-hhhHHHHHHcCCC--EEEEccccc
Q 033598 24 NPVEMVLVMTVEPGFGG-QKFMPEMMDKVRS--LRNRYPSLDIEVDGGLG-PSTIAEAASAGAN--CIVAGSSVF 92 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~g-q~~~~~~~~ki~~--l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad--~iv~Gsaif 92 (115)
.++|||= +..||.+ .. .+.+-++. +++... +++-+.|||+ .+..-.+.++|++ +...|..||
T Consensus 160 aGADfVK---TsTG~~~~~g---At~~dv~l~~m~~~v~-v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 227 (234)
T 1n7k_A 160 AGADIVK---TSTGVYTKGG---DPVTVFRLASLAKPLG-MGVKASGGIRSGIDAVLAVGAGADIIGTSSAVKVL 227 (234)
T ss_dssp TTCSEEE---SCCSSSCCCC---SHHHHHHHHHHHGGGT-CEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred hCCCEEE---eCCCCCCCCC---CCHHHHHHHHHHHHHC-CCEEEecCCCCHHHHHHHHHcCccccchHHHHHHH
Confidence 5889995 5556653 22 23333444 665544 9999999999 6677778899999 443334444
No 294
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.29 E-value=0.85 Score=31.54 Aligned_cols=78 Identities=15% Similarity=0.099 Sum_probs=46.2
Q ss_pred CceEEEecCCCCHHhH---HHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC--hhh-H
Q 033598 1 MRPGVALKPGTSVEEV---YPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG--PST-I 74 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~---~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~--~~n-i 74 (115)
|+.=++++..+.-+.+ +.+. ..+|++=+ |..- +.+...+-++++++..+++|+.+|=++. +++ +
T Consensus 1 ~~li~a~d~~~~~~~~~~~~~~~---~~v~~iev-----~~~~--~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~ 70 (207)
T 3ajx_A 1 MKLQVAIDLLSTEAALELAGKVA---EYVDIIEL-----GTPL--IKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEA 70 (207)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHG---GGCSEEEE-----CHHH--HHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHH
T ss_pred CeEEEEeCCCCHHHHHHHHHHhh---ccCCEEEE-----CcHH--HHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHH
Confidence 4555677754444333 3333 45677544 3211 2344455677777776677877754433 345 7
Q ss_pred HHHHHcCCCEEEEc
Q 033598 75 AEAASAGANCIVAG 88 (115)
Q Consensus 75 ~~l~~~Gad~iv~G 88 (115)
+.+.++|||++.+-
T Consensus 71 ~~a~~~Gad~v~vh 84 (207)
T 3ajx_A 71 DIAFKAGADLVTVL 84 (207)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHhCCCCEEEEe
Confidence 78899999999753
No 295
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=88.23 E-value=1.7 Score=27.11 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=49.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEEEEcCCCh-hhHH-HHHHcCCCEEEEcccccCCCCHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIEVDGGLGP-STIA-EAASAGANCIVAGSSVFGAPEPAH 99 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~~dGGI~~-~ni~-~l~~~Gad~iv~Gsaif~~~d~~~ 99 (115)
...|.|++-.--|+.. .++-++++++ ..+++|+.+..+-.. +... ...+.|++.++ .+.-++.+
T Consensus 49 ~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~ 116 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQD-------GVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWL-----EKPIDENL 116 (140)
T ss_dssp SCCSEEEECSCCSSSC-------HHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEE-----CSSCCHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEE-----eCCCCHHH
Confidence 4688887655556543 4556777776 456888887766443 3344 56778988773 34447777
Q ss_pred HHHHHHHHHHHH
Q 033598 100 VISLMRKSVEDA 111 (115)
Q Consensus 100 ~~~~l~~~~~~~ 111 (115)
-...++..+++.
T Consensus 117 l~~~i~~~l~~~ 128 (140)
T 3grc_A 117 LILSLHRAIDNM 128 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 777777777653
No 296
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=88.17 E-value=5 Score=27.95 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=52.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.+ .++-++++++..++.|+.+. +.-+.+......++||+.++. +.-++.+-..
T Consensus 66 ~~~dlvllD~~lp~~~-------g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~-----Kp~~~~~L~~ 133 (250)
T 3r0j_A 66 TRPDAVILDVXMPGMD-------GFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVT-----KPFSLEEVVA 133 (250)
T ss_dssp HCCSEEEEESCCSSSC-------HHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEe-----CCCCHHHHHH
Confidence 3689888766667644 45667888877777886655 445567777889999998743 5557777777
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 134 ~i~~~~~~ 141 (250)
T 3r0j_A 134 RLRVILRR 141 (250)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776654
No 297
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=88.11 E-value=2.6 Score=26.43 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=50.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeC-CCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEP-GFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~p-G~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+..+.++.+... ...|.|++-..-| |.+ .++-++++++. +++|+.+ .+.-+.+......++|++.++
T Consensus 37 ~~~~a~~~l~~~-~~~dlvi~D~~l~~~~~-------g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l-- 105 (140)
T 3h5i_A 37 TGEAAVEKVSGG-WYPDLILMDIELGEGMD-------GVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYV-- 105 (140)
T ss_dssp SHHHHHHHHHTT-CCCSEEEEESSCSSSCC-------HHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEE--
T ss_pred ChHHHHHHHhcC-CCCCEEEEeccCCCCCC-------HHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEE--
Confidence 334455544411 3579887655555 333 34456666665 6777655 455556677778889988764
Q ss_pred ccccCCCCHHHHHHHHHHHHHH
Q 033598 89 SSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 89 saif~~~d~~~~~~~l~~~~~~ 110 (115)
.+.-++.+-...++..++.
T Consensus 106 ---~KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 106 ---MKSATEQVLITIVEMALRL 124 (140)
T ss_dssp ---ETTCCHHHHHHHHHHHHHH
T ss_pred ---eCCCCHHHHHHHHHHHHHH
Confidence 3444666555556655543
No 298
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=87.95 E-value=1.2 Score=32.21 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 45 PEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 45 ~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+..++-|+++++.+++..|-+--=+|.+.++.+.++||+++|+=
T Consensus 49 ~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP 92 (217)
T 3lab_A 49 EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP 92 (217)
T ss_dssp TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES
T ss_pred ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC
Confidence 45778899999888886666655568999999999999999764
No 299
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=87.79 E-value=2 Score=33.09 Aligned_cols=72 Identities=25% Similarity=0.476 Sum_probs=50.4
Q ss_pred ecCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE---------------EcCCC
Q 033598 7 LKPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV---------------DGGLG 70 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~---------------dGGI~ 70 (115)
++|...-|.+.+..-| ..++|+|+ |.||.. -++-|+++++..|++|+.+ -|=++
T Consensus 226 mdpaN~~EAlre~~~Di~EGAD~vM---VKPal~-------YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD 295 (330)
T 1pv8_A 226 LPPGARGLALRAVDRDVREGADMLM---VKPGMP-------YLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFD 295 (330)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCSBEE---EESCGG-------GHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSC
T ss_pred CCCCCHHHHHHHHHhhHHhCCceEE---EecCcc-------HHHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCcc
Confidence 3455666666655544 26899997 788832 3667888888888899875 34555
Q ss_pred h-----hhHHHHHHcCCCEEEEc
Q 033598 71 P-----STIAEAASAGANCIVAG 88 (115)
Q Consensus 71 ~-----~ni~~l~~~Gad~iv~G 88 (115)
. |.+-.++.+|||+|+.=
T Consensus 296 ~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 296 LKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEET
T ss_pred HHHHHHHHHHHHHhcCCCEEeee
Confidence 4 56667899999999753
No 300
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=87.64 E-value=4.8 Score=27.13 Aligned_cols=73 Identities=18% Similarity=0.242 Sum_probs=49.1
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.|++-..-|+.+ .++-++++++..++.|+.+. +.-+.+......++||+.++. +.-++.+-...
T Consensus 51 ~~dlvllD~~lp~~~-------g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~-----Kp~~~~~L~~~ 118 (215)
T 1a04_A 51 DPDLILLDLNMPGMN-------GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLL-----KDMEPEDLLKA 118 (215)
T ss_dssp CCSEEEEETTSTTSC-------HHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEE-----TTCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCc-------HHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCcEEEe-----CCCCHHHHHHH
Confidence 578888765556644 45567778877777776655 555677888889999998754 44456555555
Q ss_pred HHHHHH
Q 033598 104 MRKSVE 109 (115)
Q Consensus 104 l~~~~~ 109 (115)
++..+.
T Consensus 119 i~~~~~ 124 (215)
T 1a04_A 119 LHQAAA 124 (215)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 555443
No 301
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=87.55 E-value=5.5 Score=27.94 Aligned_cols=77 Identities=9% Similarity=0.033 Sum_probs=47.7
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-E------EcCC----ChhhHHHHHHcCC
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-V------DGGL----GPSTIAEAASAGA 82 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~------dGGI----~~~ni~~l~~~Ga 82 (115)
+..+.+.+ .+++++.+. ..+.++++++.. ++|+. + ++++ +.+.+..+.++||
T Consensus 40 ~~a~~~~~--~G~~~i~~~--------------~~~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 102 (234)
T 1yxy_A 40 LMAKAAQE--AGAVGIRAN--------------SVRDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNI 102 (234)
T ss_dssp HHHHHHHH--HTCSEEEEE--------------SHHHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTC
T ss_pred HHHHHHHH--CCCcEeecC--------------CHHHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHHHcCC
Confidence 34444441 478887642 123466776653 67763 1 2333 4578999999999
Q ss_pred CEEEEcccccCCC---CHHHHHHHHHHH
Q 033598 83 NCIVAGSSVFGAP---EPAHVISLMRKS 107 (115)
Q Consensus 83 d~iv~Gsaif~~~---d~~~~~~~l~~~ 107 (115)
|.+.++......+ ...+.++.+++.
T Consensus 103 d~V~l~~~~~~~~~~~~~~~~i~~i~~~ 130 (234)
T 1yxy_A 103 AVIAMDCTKRDRHDGLDIASFIRQVKEK 130 (234)
T ss_dssp SEEEEECCSSCCTTCCCHHHHHHHHHHH
T ss_pred CEEEEcccccCCCCCccHHHHHHHHHHh
Confidence 9999987765433 456666666654
No 302
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=87.50 E-value=3.4 Score=25.27 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=48.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-..-|+.+| ++-++++++. .+++|+.+ .+.-+.+......++|++.++ .+.-++.+-
T Consensus 45 ~~~dlvllD~~~p~~~g-------~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l-----~KP~~~~~L 112 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDG-------FTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVM-----RKPFSPSQF 112 (122)
T ss_dssp BCCSEEEECSCCSSSCH-------HHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEE-----ESSCCHHHH
T ss_pred cCCCEEEEeccCCCCcH-------HHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhc-----cCCCCHHHH
Confidence 46898887666676544 4556677654 35677654 555667778888999999874 344566666
Q ss_pred HHHHHHHH
Q 033598 101 ISLMRKSV 108 (115)
Q Consensus 101 ~~~l~~~~ 108 (115)
...+++.+
T Consensus 113 ~~~i~~~l 120 (122)
T 3gl9_A 113 IEEVKHLL 120 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666554
No 303
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=87.18 E-value=1.5 Score=27.39 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=48.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-.-.|+.. .++.++++++ ..+++|+.+..+ -+.+......++|++.++. +.-++.+-
T Consensus 50 ~~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l 117 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMD-------GWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYIT-----KPFDNEDL 117 (142)
T ss_dssp CCCEEEEEESCCSSSC-------HHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEE-----SSCCHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEe-----CCCCHHHH
Confidence 3578887655555533 4556777777 556777666554 4556666777889887643 44466666
Q ss_pred HHHHHHHHHHHh
Q 033598 101 ISLMRKSVEDAQ 112 (115)
Q Consensus 101 ~~~l~~~~~~~~ 112 (115)
...++..++..+
T Consensus 118 ~~~i~~~~~~~~ 129 (142)
T 3cg4_A 118 IEKTTFFMGFVR 129 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 666666665443
No 304
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=87.18 E-value=4.1 Score=25.77 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=47.0
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIE-VDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-.--|+.. .++-++++++ ..+++|+. +.+.-+.+......+.|++.++. +.-++.+-
T Consensus 58 ~~~dliilD~~l~~~~-------g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l 125 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMT-------GIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT-----KPVNYENF 125 (152)
T ss_dssp TCBEEEEECSBCSSSB-------HHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHH
T ss_pred CCCCEEEEeCCCCCCc-------HHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe-----CCCCHHHH
Confidence 4688887655556643 4556777777 45677755 45556677788899999998743 43455555
Q ss_pred HHHHHHHH
Q 033598 101 ISLMRKSV 108 (115)
Q Consensus 101 ~~~l~~~~ 108 (115)
...+++..
T Consensus 126 ~~~i~~~~ 133 (152)
T 3heb_A 126 ANAIRQLG 133 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44555443
No 305
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.18 E-value=0.88 Score=34.64 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHhhCCCCcEEEE---cCCChhhHHHHHHcCCCEEEEc
Q 033598 45 PEMMDKVRSLRNRYPSLDIEVD---GGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 45 ~~~~~ki~~l~~~~~~~~i~~d---GGI~~~ni~~l~~~Gad~iv~G 88 (115)
...++.++++++..++.++.+- |--+.+.++...++|+|.+.+-
T Consensus 67 ~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~ 113 (345)
T 1nvm_A 67 HTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVA 113 (345)
T ss_dssp SCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEE
Confidence 4567788888887778888888 5457899999999999998775
No 306
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.14 E-value=1.4 Score=32.22 Aligned_cols=56 Identities=20% Similarity=0.312 Sum_probs=38.6
Q ss_pred CCCCEEEEEeeeCCCC-CcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFG-GQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~-gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.++|||= ...||. ... .+++-++.+++. ..+++|-+.|||+ .+....++++||+-+
T Consensus 158 aGADfVK---TSTGf~~~~g---At~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 158 AGADFVK---TSTGFHPSGG---ASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp TTCSEEE---CCCSCCTTCS---CCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HCcCEEE---cCCCCCCCCC---CCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 5899995 566764 211 223344444443 3579999999998 478888899999965
No 307
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=86.99 E-value=2.3 Score=30.60 Aligned_cols=66 Identities=23% Similarity=0.293 Sum_probs=45.8
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
++..+.+++ .+++.+.+- +. .+...+.++++++.++++.+.+.-=++.+.++...++|||+++++.
T Consensus 32 ~~~~~al~~--gGv~~iel~-----~k----~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~ 97 (224)
T 1vhc_A 32 LPLADTLAK--NGLSVAEIT-----FR----SEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG 97 (224)
T ss_dssp HHHHHHHHH--TTCCEEEEE-----TT----STTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS
T ss_pred HHHHHHHHH--cCCCEEEEe-----cc----CchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC
Confidence 345566662 479988863 11 2345677888888877665555443478999999999999998774
No 308
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=86.90 E-value=4.5 Score=27.07 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=47.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.+ .++-++++++..+++|+.+..+ -+.+......++||+.++. +.-++.+-..
T Consensus 47 ~~~dlvl~D~~lp~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~-----Kp~~~~~L~~ 114 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMS-------GIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLP-----KPFEEQALLD 114 (208)
T ss_dssp TSCEEEEEESCCSSSC-------HHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEE-----SSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHCCCcEEEe-----CCCCHHHHHH
Confidence 3578887665556643 4556777777777888766554 4556778888999987754 4345555555
Q ss_pred HHHHHH
Q 033598 103 LMRKSV 108 (115)
Q Consensus 103 ~l~~~~ 108 (115)
.++..+
T Consensus 115 ~i~~~~ 120 (208)
T 1yio_A 115 AIEQGL 120 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 309
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=86.88 E-value=4.3 Score=25.73 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=50.4
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcC-CCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAG-ANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~G-ad~iv~Gsa 90 (115)
.+.....+.. ..+|.|++-..-|+.. .++-++++++..+++|+.+..+ -+.+......+.| ++.++.
T Consensus 40 ~~~a~~~l~~-~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~--- 108 (154)
T 2rjn_A 40 PLDALEALKG-TSVQLVISDMRMPEMG-------GEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLL--- 108 (154)
T ss_dssp HHHHHHHHTT-SCCSEEEEESSCSSSC-------HHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEE---
T ss_pred HHHHHHHHhc-CCCCEEEEecCCCCCC-------HHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeee---
Confidence 3333344432 3589888765556533 4456777777777888766555 4456677777887 887743
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q 033598 91 VFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 91 if~~~d~~~~~~~l~~~~~ 109 (115)
+.-++.+-...++..+.
T Consensus 109 --kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 109 --KPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp --SSCCHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHH
Confidence 33355555555555443
No 310
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=86.85 E-value=1 Score=34.90 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=49.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCC-----CC-cccchhHHHHHHHHHhhCCCCcEEEE---cCCChhhHHHHHHcC
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGF-----GG-QKFMPEMMDKVRSLRNRYPSLDIEVD---GGLGPSTIAEAASAG 81 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~-----~g-q~~~~~~~~ki~~l~~~~~~~~i~~d---GGI~~~ni~~l~~~G 81 (115)
.+++.....++. -..|.+.+ -++|.. .| ..|....++.|+++++.. ++|+.+- +|++++.+..+.++|
T Consensus 135 ~~~~~~~~av~~-~~a~al~I-hln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aG 211 (368)
T 3vkj_A 135 YGLKEFQDAIQM-IEADAIAV-HLNPAQEVFQPEGEPEYQIYALEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYG 211 (368)
T ss_dssp CCHHHHHHHHHH-TTCSEEEE-ECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHH-hcCCCeEE-EecchhhhhCCCCCchhhHHHHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCC
Confidence 455655554422 14566553 344431 11 233224677888888764 7899985 468999999999999
Q ss_pred CCEEEEc
Q 033598 82 ANCIVAG 88 (115)
Q Consensus 82 ad~iv~G 88 (115)
+|.++++
T Consensus 212 ad~I~V~ 218 (368)
T 3vkj_A 212 IKNFDTS 218 (368)
T ss_dssp CCEEECC
T ss_pred CCEEEEe
Confidence 9999985
No 311
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.73 E-value=2.8 Score=30.55 Aligned_cols=68 Identities=10% Similarity=0.175 Sum_probs=43.6
Q ss_pred CCCCEEEEEee--eCCCCCcccc-------------hhHHHHHHHHHhhCCCCcEEEEcCCC-------hhhHHHHHHcC
Q 033598 24 NPVEMVLVMTV--EPGFGGQKFM-------------PEMMDKVRSLRNRYPSLDIEVDGGLG-------PSTIAEAASAG 81 (115)
Q Consensus 24 ~~vD~vlvm~v--~pG~~gq~~~-------------~~~~~ki~~l~~~~~~~~i~~dGGI~-------~~ni~~l~~~G 81 (115)
.++|+|-+..- +|-.+|.-.. ...++-++++|+.+.++|+.+.+-.| .+-++.+.++|
T Consensus 43 ~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aG 122 (268)
T 1qop_A 43 AGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVG 122 (268)
T ss_dssp TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcC
Confidence 57999987431 2323332211 23456688888875678888765344 36677899999
Q ss_pred CCEEEEcccc
Q 033598 82 ANCIVAGSSV 91 (115)
Q Consensus 82 ad~iv~Gsai 91 (115)
+|++++...-
T Consensus 123 adgii~~d~~ 132 (268)
T 1qop_A 123 VDSVLVADVP 132 (268)
T ss_dssp CCEEEETTCC
T ss_pred CCEEEEcCCC
Confidence 9988876443
No 312
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=86.62 E-value=4.2 Score=25.37 Aligned_cols=86 Identities=17% Similarity=0.218 Sum_probs=53.9
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEE-EEcCCChhhHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIE-VDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.++.+. . ...|.|++-..-|+.+| ++-++++++. .+++|+. +.+.-+.+......++|++.++
T Consensus 36 ~~~~al~~~~-~-~~~dlvl~D~~lp~~~g-------~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l- 105 (136)
T 3t6k_A 36 SGEEALQQIY-K-NLPDALICDVLLPGIDG-------YTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYL- 105 (136)
T ss_dssp SHHHHHHHHH-H-SCCSEEEEESCCSSSCH-------HHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEE-
T ss_pred CHHHHHHHHH-h-CCCCEEEEeCCCCCCCH-------HHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEE-
Confidence 3344444433 2 46898887666677554 4445666653 3467765 4555566777788899999874
Q ss_pred cccccCCCCHHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
.+.-++.+-...+++.+..
T Consensus 106 ----~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 106 ----AKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp ----ETTCCHHHHHHHHHHHHHC
T ss_pred ----eCCCCHHHHHHHHHHHHhc
Confidence 3545677777777766653
No 313
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=86.54 E-value=3.5 Score=28.14 Aligned_cols=57 Identities=19% Similarity=0.327 Sum_probs=40.1
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh----CCCCcEEEEcCC--ChhhHHHHHHcCCCEEEEc
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR----YPSLDIEVDGGL--GPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~----~~~~~i~~dGGI--~~~ni~~l~~~Gad~iv~G 88 (115)
.+|.|++-..-|+.+| ++-++++++. .+++|+.+.-+- +.+......++|++.++.=
T Consensus 119 ~~dlillD~~lp~~~G-------~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K 181 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDG-------YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDK 181 (206)
T ss_dssp SCSEEEEESCCSSSCH-------HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEET
T ss_pred CCCEEEEcCCCCCCCH-------HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC
Confidence 6899887766677544 4445555553 467887766664 5678888899999988654
No 314
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=86.34 E-value=3.8 Score=24.68 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=47.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+..| ++.++++++. ++.|+.+. +.-+.+......++|++.++ .+.-++.+-..
T Consensus 46 ~~~dlvi~D~~l~~~~g-------~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~ 112 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNG-------LLLARELREQ-ANVALMFLTGRDNEVDKILGLEIGADDYI-----TKPFNPRELTI 112 (123)
T ss_dssp SCCSEEEECSSCSSSCH-------HHHHHHHHHH-CCCEEEEEESCCSHHHHHHHHHHTCSEEE-----ESSCCHHHHHH
T ss_pred CCCCEEEEcCCCCCCCH-------HHHHHHHHhC-CCCcEEEEECCCChHHHHHHHhcCcceEE-----eCCCCHHHHHH
Confidence 46788876544565443 4456666665 57776655 44566677788899999874 34456666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 113 ~i~~~~~~ 120 (123)
T 1xhf_A 113 RARNLLSR 120 (123)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 315
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.25 E-value=2.8 Score=29.82 Aligned_cols=65 Identities=22% Similarity=0.280 Sum_probs=45.3
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+..+.+++ .+++.+.+--- .+...+.++++++.++++.+.+.-=++.+.++...++|||+++++.
T Consensus 32 ~~~~al~~--gGv~~iel~~k---------~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~ 96 (214)
T 1wbh_A 32 PMAKALVA--GGVRVLNVTLR---------TECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG 96 (214)
T ss_dssp HHHHHHHH--TTCCEEEEESC---------STTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS
T ss_pred HHHHHHHH--cCCCEEEEeCC---------ChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC
Confidence 45666662 47998886421 1345677888888777665555443567899999999999998874
No 316
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=86.08 E-value=3.9 Score=29.40 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=38.7
Q ss_pred HHHHHHHHhhCCCCcEEE-----EcC--C----ChhhHHHHHHcCCCEEEEcccccC-CCCHHHHHHHHHH
Q 033598 48 MDKVRSLRNRYPSLDIEV-----DGG--L----GPSTIAEAASAGANCIVAGSSVFG-APEPAHVISLMRK 106 (115)
Q Consensus 48 ~~ki~~l~~~~~~~~i~~-----dGG--I----~~~ni~~l~~~Gad~iv~Gsaif~-~~d~~~~~~~l~~ 106 (115)
.+-|+++|+.. ++|+.. .|| + +.+.+.++.++|||.+++++.... .+...+.++.+++
T Consensus 58 ~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 58 IDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp HHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 45677777764 677641 144 2 445788999999999999987653 3455666665554
No 317
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=86.00 E-value=8.1 Score=29.33 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=51.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.+|-. -++++++..+++|+.+ .|--+.+......+.||+.++ .+.-++.+-..
T Consensus 43 ~~~DlvllDi~mP~~dG~e-------ll~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~~yl-----~KP~~~~~L~~ 110 (368)
T 3dzd_A 43 LFFPVIVLDVWMPDGDGVN-------FIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFL-----EKPFSVERFLL 110 (368)
T ss_dssp BCCSEEEEESEETTEETTT-------HHHHHHHHCTTCEEEEEECSSCCHHHHHHHHHTCCEEE-----ESSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHH-------HHHHHHhhCCCCeEEEEeCCCCHHHHHHHHhcCcceEE-----eCCCCHHHHHH
Confidence 4689888876678866543 3566666667788665 555567888889999999774 45456666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 111 ~i~~~l~~ 118 (368)
T 3dzd_A 111 TIKHAFEE 118 (368)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 318
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=85.93 E-value=2 Score=26.37 Aligned_cols=72 Identities=8% Similarity=0.156 Sum_probs=46.6
Q ss_pred CCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh------hhHHHHHHcCCCEEEEcccccCCCCHHH
Q 033598 26 VEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP------STIAEAASAGANCIVAGSSVFGAPEPAH 99 (115)
Q Consensus 26 vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~------~ni~~l~~~Gad~iv~Gsaif~~~d~~~ 99 (115)
.|.|++-..-|+. ..++-++++++..++.|+.+..+-.. +.+....++|++.+ +.+.-++.+
T Consensus 47 ~dlvi~D~~l~~~-------~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~-----l~KP~~~~~ 114 (135)
T 3eqz_A 47 QDIIILDLMMPDM-------DGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINT-----FTKPINTEV 114 (135)
T ss_dssp TEEEEEECCTTTT-------HHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE-----EESSCCHHH
T ss_pred CCEEEEeCCCCCC-------CHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCccee-----eCCCCCHHH
Confidence 7777765544553 35566788888778899888888776 45555667776655 334446666
Q ss_pred HHHHHHHHHH
Q 033598 100 VISLMRKSVE 109 (115)
Q Consensus 100 ~~~~l~~~~~ 109 (115)
-...+++...
T Consensus 115 l~~~l~~~~~ 124 (135)
T 3eqz_A 115 LTCFLTSLSN 124 (135)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHh
Confidence 6555655443
No 319
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.93 E-value=0.95 Score=33.60 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=52.4
Q ss_pred HHhHHHhHhCCCCCCEEEEEe--eeCCCCCcccch-------------hHHHHHHHHHhhCCCCcEEEEcCCCh------
Q 033598 13 VEEVYPLVEGANPVEMVLVMT--VEPGFGGQKFMP-------------EMMDKVRSLRNRYPSLDIEVDGGLGP------ 71 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~~~-------------~~~~ki~~l~~~~~~~~i~~dGGI~~------ 71 (115)
.+.+..+.+ .++|+|=+.. .+|=.+|.-.+. ..++-++++|+.+.++|+..-|=.|+
T Consensus 35 ~~~~~~l~~--~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~ 112 (267)
T 3vnd_A 35 LKIIQTLVD--NGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGI 112 (267)
T ss_dssp HHHHHHHHH--TTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHHH--cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhH
Confidence 445555542 5899998753 245555544332 34778888887756889988865553
Q ss_pred -hhHHHHHHcCCCEEEEccccc
Q 033598 72 -STIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 72 -~ni~~l~~~Gad~iv~Gsaif 92 (115)
.-++.+.++|+|++++...-+
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp~ 134 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVPV 134 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSCG
T ss_pred HHHHHHHHHcCCCEEEeCCCCH
Confidence 357789999999998874433
No 320
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=85.85 E-value=2.6 Score=26.24 Aligned_cols=74 Identities=9% Similarity=0.044 Sum_probs=41.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEEc-CCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVDG-GLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-.--|+..| ++-++++++.. +++|+.+.. .-+.+......++|++.++ .+.-++.+-
T Consensus 45 ~~~dlvi~D~~l~~~~g-------~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l 112 (140)
T 3n53_A 45 HHPDLVILDMDIIGENS-------PNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYL-----TKPFNRNDL 112 (140)
T ss_dssp HCCSEEEEETTC-------------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEE-----ESSCCHHHH
T ss_pred CCCCEEEEeCCCCCCcH-------HHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeee-----eCCCCHHHH
Confidence 35788877655566444 33466677665 677766554 4456667777889998774 344466666
Q ss_pred HHHHHHHHH
Q 033598 101 ISLMRKSVE 109 (115)
Q Consensus 101 ~~~l~~~~~ 109 (115)
...++..++
T Consensus 113 ~~~i~~~~~ 121 (140)
T 3n53_A 113 LSRIEIHLR 121 (140)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666554
No 321
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=85.84 E-value=4.5 Score=24.99 Aligned_cols=86 Identities=9% Similarity=0.175 Sum_probs=54.0
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~G 88 (115)
.+..+.++.+. . ...|.|++-..-|+.. .++.++++++..++.|+.+..+ -+.+......+.|++.++
T Consensus 36 ~~~~~al~~~~-~-~~~dlvilD~~lp~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l-- 104 (133)
T 3b2n_A 36 DNGLDAMKLIE-E-YNPNVVILDIEMPGMT-------GLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYV-- 104 (133)
T ss_dssp SCHHHHHHHHH-H-HCCSEEEECSSCSSSC-------HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEE--
T ss_pred CCHHHHHHHHh-h-cCCCEEEEecCCCCCC-------HHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEE--
Confidence 33444444433 1 3578888765556644 3455677777667888776655 456677888899999874
Q ss_pred ccccCCCCHHHHHHHHHHHHH
Q 033598 89 SSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 89 saif~~~d~~~~~~~l~~~~~ 109 (115)
.+.-++.+-...++..++
T Consensus 105 ---~Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 105 ---LKERSIEELVETINKVNN 122 (133)
T ss_dssp ---ETTSCHHHHHHHHHHHHC
T ss_pred ---ECCCCHHHHHHHHHHHHc
Confidence 344466666666665544
No 322
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=85.53 E-value=0.71 Score=35.94 Aligned_cols=44 Identities=14% Similarity=0.187 Sum_probs=35.5
Q ss_pred CCcEEEEcCCC--hhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 60 SLDIEVDGGLG--PSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 60 ~~~i~~dGGI~--~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
+.|+.+.||++ ++-...+.+-++|.|.+|+.+...+|+.+.+++
T Consensus 318 ~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~ 363 (400)
T 4gbu_A 318 KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEK 363 (400)
T ss_dssp CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHc
Confidence 68999999996 345566777889999999999988998666543
No 323
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=85.49 E-value=4.5 Score=28.08 Aligned_cols=58 Identities=10% Similarity=0.243 Sum_probs=38.8
Q ss_pred HHHHHHHhhCCCCcEEE-------EcCC----ChhhHHHHHHcCCCEEEEcccccCCC--CHHHHHHHHHHH
Q 033598 49 DKVRSLRNRYPSLDIEV-------DGGL----GPSTIAEAASAGANCIVAGSSVFGAP--EPAHVISLMRKS 107 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~-------dGGI----~~~ni~~l~~~Gad~iv~Gsaif~~~--d~~~~~~~l~~~ 107 (115)
+.++++++.. ++|+.. ++++ +.+.+..+.++|+|.+.+++.....+ .+.+.++++++.
T Consensus 46 ~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~ 116 (223)
T 1y0e_A 46 EDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTH 116 (223)
T ss_dssp HHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHh
Confidence 4466666654 677742 3344 45788899999999999998765443 456666666654
No 324
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=85.42 E-value=4.7 Score=24.84 Aligned_cols=75 Identities=11% Similarity=0.154 Sum_probs=49.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh--hCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN--RYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~--~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.|++-..-|+.. .++-++++++ ..+++|+.+. +.-+.+......+.|++.++. +.-++.+-
T Consensus 53 ~~~dlii~d~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l 120 (143)
T 3cnb_A 53 VKPDVVMLDLMMVGMD-------GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFG-----KPLNFTLL 120 (143)
T ss_dssp TCCSEEEEETTCTTSC-------HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHH
T ss_pred cCCCEEEEecccCCCc-------HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEe-----CCCCHHHH
Confidence 4588888655455533 4556777777 4567886654 555667778888999998743 44466666
Q ss_pred HHHHHHHHHH
Q 033598 101 ISLMRKSVED 110 (115)
Q Consensus 101 ~~~l~~~~~~ 110 (115)
...++..++.
T Consensus 121 ~~~i~~~~~~ 130 (143)
T 3cnb_A 121 EKTIKQLVEQ 130 (143)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 6667666653
No 325
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=85.25 E-value=3.3 Score=30.71 Aligned_cols=81 Identities=17% Similarity=0.090 Sum_probs=47.8
Q ss_pred EEEecCCCCHHhHHHhHhCCCCCCEEEEEe----eeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC---hhhHHH
Q 033598 4 GVALKPGTSVEEVYPLVEGANPVEMVLVMT----VEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG---PSTIAE 76 (115)
Q Consensus 4 Glal~p~t~~~~~~~~~~~~~~vD~vlvm~----v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~---~~ni~~ 76 (115)
|+.. -.+|++..+.+.+ .++|.|.+++ ....+.|... ....+.++++++.. ++|+.+ ++. .+.+..
T Consensus 23 g~i~-~~~~~~~a~~~~~--~Ga~~I~~l~p~~~~~~~~~G~~~-~~~~~~i~~I~~~~-~iPv~~--k~r~g~~~~~~~ 95 (305)
T 2nv1_A 23 GVIM-DVINAEQAKIAEE--AGAVAVMALERVPADIRAAGGVAR-MADPTIVEEVMNAV-SIPVMA--KARIGHIVEARV 95 (305)
T ss_dssp CEEE-EESSHHHHHHHHH--TTCSEEEECCC-------CCCCCC-CCCHHHHHHHHHHC-SSCEEE--EECTTCHHHHHH
T ss_pred Ceee-cCCHHHHHHHHHH--cCCCEEEEcCCCcchhhhccCccc-CCCHHHHHHHHHhC-CCCEEe--cccccchHHHHH
Confidence 4443 3467887777763 5899996554 2222333211 12345566666654 678764 443 466788
Q ss_pred HHHcCCCEEEEccccc
Q 033598 77 AASAGANCIVAGSSVF 92 (115)
Q Consensus 77 l~~~Gad~iv~Gsaif 92 (115)
+.++|||.++ ++..+
T Consensus 96 ~~a~GAd~V~-~~~~l 110 (305)
T 2nv1_A 96 LEAMGVDYID-ESEVL 110 (305)
T ss_dssp HHHHTCSEEE-ECTTS
T ss_pred HHHCCCCEEE-EeccC
Confidence 8899999997 55443
No 326
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=85.21 E-value=0.84 Score=33.74 Aligned_cols=70 Identities=21% Similarity=0.337 Sum_probs=48.3
Q ss_pred EEEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCC
Q 033598 30 LVMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGA 94 (115)
Q Consensus 30 lvm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~ 94 (115)
++++-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.++ .+.++|++-+|++..++
T Consensus 160 ~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a 238 (248)
T 1r2r_A 160 VVLAYEPVWAIG-TGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKP 238 (248)
T ss_dssp EEEEECCGGGSS-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred eEEEEecHHhhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhCh
Confidence 3456777 4 45555544444433 2332 22 2488999999999999986 67899999999999987
Q ss_pred CCHHHH
Q 033598 95 PEPAHV 100 (115)
Q Consensus 95 ~d~~~~ 100 (115)
+++.+-
T Consensus 239 ~~F~~i 244 (248)
T 1r2r_A 239 EFVDII 244 (248)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
No 327
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=85.18 E-value=3.2 Score=31.04 Aligned_cols=69 Identities=23% Similarity=0.380 Sum_probs=47.6
Q ss_pred EEeeeCCC---CCcccchhHHHHH-HHHHhh----C-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCCCC
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKV-RSLRNR----Y-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGAPE 96 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki-~~l~~~----~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~~d 96 (115)
+++-+|-. +|....++..+.+ +.+|+. + .+++|.-=|+++++|+.++ .+.++|++-+|++-.+ ++
T Consensus 184 vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~-~~ 262 (271)
T 3krs_A 184 VIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK-PT 262 (271)
T ss_dssp EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGS-TT
T ss_pred EEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhh-HH
Confidence 55677732 4665555554443 233332 2 2588999999999999986 5789999999999887 56
Q ss_pred HHHH
Q 033598 97 PAHV 100 (115)
Q Consensus 97 ~~~~ 100 (115)
..+-
T Consensus 263 F~~I 266 (271)
T 3krs_A 263 FAKI 266 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 328
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=85.17 E-value=4.9 Score=24.85 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=49.0
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHh----hCCCCcEE-EEcCCChhhHHHHHHcC-CCEEEEcccccCCCCHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN----RYPSLDIE-VDGGLGPSTIAEAASAG-ANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~----~~~~~~i~-~dGGI~~~ni~~l~~~G-ad~iv~Gsaif~~~d~~ 98 (115)
..|.|++-..-|+.. .++.++++++ ..++.++. +.+.-+.+........| ++.+ |.+.-++.
T Consensus 60 ~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~-----l~KP~~~~ 127 (146)
T 3ilh_A 60 WPSIICIDINMPGIN-------GWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYY-----VSKPLTAN 127 (146)
T ss_dssp CCSEEEEESSCSSSC-------HHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEE-----ECSSCCHH
T ss_pred CCCEEEEcCCCCCCC-------HHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCccee-----eeCCCCHH
Confidence 478888766667644 3455677776 45667755 55566677888888999 9987 34445666
Q ss_pred HHHHHHHHHHHH
Q 033598 99 HVISLMRKSVED 110 (115)
Q Consensus 99 ~~~~~l~~~~~~ 110 (115)
+-...+++....
T Consensus 128 ~L~~~i~~~~~~ 139 (146)
T 3ilh_A 128 ALNNLYNKVLNE 139 (146)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHh
Confidence 666666665543
No 329
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=85.15 E-value=2.2 Score=29.99 Aligned_cols=44 Identities=27% Similarity=0.222 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHhhCCCCcEEEEcCCC---hhhHHHHHHcCCCEEEEc
Q 033598 45 PEMMDKVRSLRNRYPSLDIEVDGGLG---PSTIAEAASAGANCIVAG 88 (115)
Q Consensus 45 ~~~~~ki~~l~~~~~~~~i~~dGGI~---~~ni~~l~~~Gad~iv~G 88 (115)
...++-++++|+.+++.++..|.-+. ...++.+.++|||++++-
T Consensus 44 ~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh 90 (218)
T 3jr2_A 44 AEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVS 90 (218)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEE
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEe
Confidence 34556688888876677777765432 224678899999999765
No 330
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=85.00 E-value=4.8 Score=24.57 Aligned_cols=75 Identities=9% Similarity=0.137 Sum_probs=49.3
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-..-|+.. .++-++++++.. +++|+.+. +.-+.+......++|++.++. +.-++.+-.
T Consensus 55 ~~dlvi~d~~~~~~~-------g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~ 122 (140)
T 1k68_A 55 RPDLILLXLNLPKKD-------GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT-----KSANLSQLF 122 (140)
T ss_dssp CCSEEEECSSCSSSC-------HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHH
T ss_pred CCcEEEEecCCCccc-------HHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheec-----CCCCHHHHH
Confidence 578887655555533 445567777654 56776654 555677888889999998743 444666666
Q ss_pred HHHHHHHHHH
Q 033598 102 SLMRKSVEDA 111 (115)
Q Consensus 102 ~~l~~~~~~~ 111 (115)
..++..++.+
T Consensus 123 ~~i~~~~~~~ 132 (140)
T 1k68_A 123 QIVKGIEEFW 132 (140)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6676666554
No 331
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=84.73 E-value=5.5 Score=30.61 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=44.4
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc----cccCCCCHHHHHHHHHHHH
Q 033598 46 EMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS----SVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs----aif~~~d~~~~~~~l~~~~ 108 (115)
...+.|+++++.. +.|+.+=|-.+.+....+.++|+|.|++.. .+.......+.+.++++.+
T Consensus 216 ~~~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v 281 (368)
T 2nli_A 216 ISPRDIEEIAGHS-GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV 281 (368)
T ss_dssp CCHHHHHHHHHHS-SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHc-CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh
Confidence 3566688888765 689998888999999999999999999952 2332333445555555443
No 332
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=84.72 E-value=7.1 Score=26.33 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=51.0
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.. .++-++++++..++.|+.+..+-. .+......++||+.++. +.-++.+-..
T Consensus 45 ~~~dlvllD~~l~~~~-------g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~ 112 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHD-------GWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLP-----KPFDLRELIA 112 (225)
T ss_dssp SCCSEEEEESCCSSSC-------HHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEe-----CCCCHHHHHH
Confidence 4689888766566643 455677787777788877666544 45667778899988744 4456666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..+..
T Consensus 113 ~i~~~~~~ 120 (225)
T 1kgs_A 113 RVRALIRR 120 (225)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 67666554
No 333
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.71 E-value=1 Score=33.51 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=52.0
Q ss_pred HHhHHHhHhCCCCCCEEEEEe--eeCCCCCcccch-------------hHHHHHHHHHhhCCCCcEEEEcCCC-------
Q 033598 13 VEEVYPLVEGANPVEMVLVMT--VEPGFGGQKFMP-------------EMMDKVRSLRNRYPSLDIEVDGGLG------- 70 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~~~-------------~~~~ki~~l~~~~~~~~i~~dGGI~------- 70 (115)
++.+..+.+ .++|+|=+.. .+|-.+|...+. ..++-++++|+.++++|+.+-|=.|
T Consensus 37 ~~~~~~l~~--~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~ 114 (271)
T 3nav_A 37 LAIMQTLID--AGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGI 114 (271)
T ss_dssp HHHHHHHHH--TTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCH
T ss_pred HHHHHHHHH--cCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhH
Confidence 345555542 4799997753 234455544432 5567788888776789998876333
Q ss_pred hhhHHHHHHcCCCEEEEccccc
Q 033598 71 PSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 71 ~~ni~~l~~~Gad~iv~Gsaif 92 (115)
..-++.+.++|+|++++...-+
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp~ 136 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVPT 136 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSCG
T ss_pred HHHHHHHHHCCCCEEEECCCCH
Confidence 4457789999999998875444
No 334
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=84.70 E-value=5.6 Score=29.53 Aligned_cols=56 Identities=18% Similarity=0.257 Sum_probs=39.0
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.++|||= ...||....- +++-++-+++. .++++|-+.|||+ .+....+.++||+-+
T Consensus 185 aGADfVK---TSTGf~~~GA---T~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 185 AGAHFVK---TSTGFGTGGA---TAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp TTCSEEE---CCCSSSSCCC---CHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred hCcCEEE---cCCCCCCCCC---CHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 5899995 5567753332 33334444443 4579999999998 477888899999965
No 335
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.70 E-value=2 Score=31.30 Aligned_cols=65 Identities=23% Similarity=0.232 Sum_probs=44.9
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+..+.+++ .+++.|-+= +. .+..++-|+++++.+++..+.+..=++.+.++...++|||++++..
T Consensus 50 ~~a~al~~--gGi~~iEvt-----~~----t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~ 114 (232)
T 4e38_A 50 PLGKVLAE--NGLPAAEIT-----FR----SDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG 114 (232)
T ss_dssp HHHHHHHH--TTCCEEEEE-----TT----STTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS
T ss_pred HHHHHHHH--CCCCEEEEe-----CC----CCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC
Confidence 44445542 477777651 11 2346777888888777765555555688999999999999998764
No 336
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=84.62 E-value=0.94 Score=33.46 Aligned_cols=69 Identities=26% Similarity=0.406 Sum_probs=47.9
Q ss_pred EEeeeC----CCCCcccchhHHHHHH-HHHh----h-----CCCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCCC
Q 033598 31 VMTVEP----GFGGQKFMPEMMDKVR-SLRN----R-----YPSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 31 vm~v~p----G~~gq~~~~~~~~ki~-~l~~----~-----~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~~ 95 (115)
+++-+| | +|..-.++..+.+. .+|+ . ..+++|.-=|+++++|+.++ .+.++|++-+|++..+ +
T Consensus 160 vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~ 237 (247)
T 1ney_A 160 VVAYEPVXAIG-TGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-P 237 (247)
T ss_dssp EEEECCGGGTT-TSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS-T
T ss_pred EEEECChhhcC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH-H
Confidence 556777 4 45555544444332 2333 1 12488999999999999876 6789999999999988 7
Q ss_pred CHHHHH
Q 033598 96 EPAHVI 101 (115)
Q Consensus 96 d~~~~~ 101 (115)
++.+-+
T Consensus 238 ~F~~Ii 243 (247)
T 1ney_A 238 EFVDII 243 (247)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 337
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=84.46 E-value=13 Score=29.20 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=49.8
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE--EcCCChhhH-HHHHHcCCCEEEEccc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV--DGGLGPSTI-AEAASAGANCIVAGSS 90 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~--dGGI~~~ni-~~l~~~Gad~iv~Gsa 90 (115)
+.++.++.| +.+|.|+++-+.+.++|.......-.-++.+++...+.|+.+ .||-+.+.. +.|.++|+-.+
T Consensus 358 ~al~~~l~d-p~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~~~~~~~L~~~Gip~~----- 431 (457)
T 2csu_A 358 RTAKLLLQD-PNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVSEKAKELLEKNGIPTY----- 431 (457)
T ss_dssp HHHHHHHHS-TTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTTHHHHHHHHTTTCCEE-----
T ss_pred HHHHHHhcC-CCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcchHHHHHHHHhCCCCcc-----
Confidence 456677777 899999987766656544311111111223333223466554 677555444 44556664433
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q 033598 91 VFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 91 if~~~d~~~~~~~l~~~~~ 109 (115)
+++.++++.+....+
T Consensus 432 ----~spe~Av~al~~l~~ 446 (457)
T 2csu_A 432 ----ERPEDVASAAYALVE 446 (457)
T ss_dssp ----SSHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHH
Confidence 688889888887765
No 338
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=84.41 E-value=5.6 Score=29.93 Aligned_cols=80 Identities=16% Similarity=0.273 Sum_probs=44.5
Q ss_pred ecCCCCHHhHHHhHhCCCCCCEEEEEe--eeCCCCCccc---chhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC
Q 033598 7 LKPGTSVEEVYPLVEGANPVEMVLVMT--VEPGFGGQKF---MPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG 81 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~---~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G 81 (115)
.+++.-++..+.+++ .++|+|=|.. ..||...-.- ......-|+.+++. ++||++|=- +++.++..+++|
T Consensus 49 ~~~~~a~~~a~~~v~--~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT~-~~~Va~aAl~aG 123 (294)
T 2dqw_A 49 LDPERALERAREMVA--EGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDTR-KPEVAEEALKLG 123 (294)
T ss_dssp ----CCHHHHHHHHH--HTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEECS-CHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEECC-CHHHHHHHHHhC
Confidence 345555666666663 5899987764 4576433222 23333445555543 789999865 788888888888
Q ss_pred CCEEEEcccc
Q 033598 82 ANCIVAGSSV 91 (115)
Q Consensus 82 ad~iv~Gsai 91 (115)
++++--.|+.
T Consensus 124 a~iINdVsg~ 133 (294)
T 2dqw_A 124 AHLLNDVTGL 133 (294)
T ss_dssp CSEEECSSCS
T ss_pred CCEEEECCCC
Confidence 8877666654
No 339
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=84.38 E-value=5.3 Score=32.17 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc----ccccCCCCHHHHHHHHHHHH
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG----SSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G----saif~~~d~~~~~~~l~~~~ 108 (115)
.++.|+++++.. ++|+.+=|..+.+....+.++|+|.|+++ +.+......-+.+.++.+.+
T Consensus 331 ~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 331 TWKDIEELKKKT-KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp CHHHHHHHHHHC-SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 466788888875 78999988889999999999999999994 22332333344455555444
No 340
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=84.28 E-value=4.4 Score=29.55 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=51.8
Q ss_pred EecC--CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCC
Q 033598 6 ALKP--GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGAN 83 (115)
Q Consensus 6 al~p--~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad 83 (115)
+..| .++.+.++.+.+ .++|.|.+.. ..|.. ....++.++++|+ .++|+..-++.+..- ..|+|
T Consensus 14 ~gDP~~~~t~~~~~~l~~--~GaD~ielG~----S~Gvt-~~~~~~~v~~ir~--~~~Pivlm~y~~n~i-----~~G~d 79 (240)
T 1viz_A 14 KLDPNKDLPDEQLEILCE--SGTDAVIIGG----SDGVT-EDNVLRMMSKVRR--FLVPCVLEVSAIEAI-----VPGFD 79 (240)
T ss_dssp EECTTSCCCHHHHHHHHT--SCCSEEEECC--------C-HHHHHHHHHHHTT--SSSCEEEECSCGGGC-----CSCCS
T ss_pred eeCCCccccHHHHHHHHH--cCCCEEEECC----CCCCC-HHHHHHHHHHhhC--cCCCEEEecCccccc-----cCCCC
Confidence 4555 466778877762 5899998754 12222 3457888888887 489999999984211 78999
Q ss_pred EEEEcccccC
Q 033598 84 CIVAGSSVFG 93 (115)
Q Consensus 84 ~iv~Gsaif~ 93 (115)
.+++-+-...
T Consensus 80 g~iiPdLp~e 89 (240)
T 1viz_A 80 LYFIPSVLNS 89 (240)
T ss_dssp EEEEEEETTB
T ss_pred EEEEcccCcc
Confidence 9999887765
No 341
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=84.08 E-value=5.7 Score=30.63 Aligned_cols=60 Identities=13% Similarity=0.060 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc----ccccCCCCHHHHHHHHHH
Q 033598 46 EMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG----SSVFGAPEPAHVISLMRK 106 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G----saif~~~d~~~~~~~l~~ 106 (115)
-+.+.++++++.. +.|+.+=|-.+.+....+.++|+|.+++. +.+...+...+.+.++++
T Consensus 204 ~~w~~i~~lr~~~-~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~ 267 (352)
T 3sgz_A 204 FCWNDLSLLQSIT-RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVA 267 (352)
T ss_dssp CCHHHHHHHHHHC-CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHH
Confidence 4556788888774 78999988899999999999999999984 223333333445555444
No 342
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=84.00 E-value=6.1 Score=24.94 Aligned_cols=58 Identities=22% Similarity=0.243 Sum_probs=39.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc-CCChhhHHHHHHcCCCEEEEc
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG-GLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG-GI~~~ni~~l~~~Gad~iv~G 88 (115)
...|.|++-.--|+.. .++.++++++..+..|+.+.. .-+.+......+.|++.++.-
T Consensus 50 ~~~dlii~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~k 108 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPG-------GIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTK 108 (153)
T ss_dssp TCCSEEEECSCCSSSC-------HHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEET
T ss_pred CCCCEEEEecCCCCCC-------HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEec
Confidence 3578887654445432 455677777777777866554 456777888899999988654
No 343
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=83.85 E-value=5.6 Score=24.38 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=47.7
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.+++-..-|+.. .++-++++++..+..|+.+. +.-+.+......++|++.++. +.-++.+-...
T Consensus 47 ~~dlvl~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~ 114 (136)
T 1mvo_A 47 KPDLIVLDVMLPKLD-------GIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMT-----KPFSPREVNAR 114 (136)
T ss_dssp CCSEEEEESSCSSSC-------HHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEE-----SSCCHHHHHHH
T ss_pred CCCEEEEecCCCCCC-------HHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEE-----CCCCHHHHHHH
Confidence 578887665556644 34556777776667776654 445666777888999998743 44466666666
Q ss_pred HHHHHH
Q 033598 104 MRKSVE 109 (115)
Q Consensus 104 l~~~~~ 109 (115)
++..+.
T Consensus 115 i~~~~~ 120 (136)
T 1mvo_A 115 VKAILR 120 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 344
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=83.72 E-value=2.9 Score=28.71 Aligned_cols=74 Identities=8% Similarity=0.055 Sum_probs=48.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh-hCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN-RYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~-~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..+|.|++-..-||. ..++-++++++ ..++.|+.+-.+ -+.+......++||+.++ .+.-++.+-.
T Consensus 53 ~~~dlvllD~~mp~~-------~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l-----~Kp~~~~~L~ 120 (225)
T 3klo_A 53 RSIQMLVIDYSRISD-------DVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVF-----YIDDDMDTLI 120 (225)
T ss_dssp GGCCEEEEEGGGCCH-------HHHHHHHHHHHHHCTTCEEEEEEECTTCCHHHHTTSTTEEEEE-----ETTCCHHHHH
T ss_pred cCCCEEEEeCCCCCC-------CHHHHHHHHHHhhCCCCcEEEEECCcchhHHHHHHHhCCCEEE-----ecCCCHHHHH
Confidence 357888776666763 35666788887 678888665544 445566677789988774 4555666666
Q ss_pred HHHHHHHH
Q 033598 102 SLMRKSVE 109 (115)
Q Consensus 102 ~~l~~~~~ 109 (115)
..++..++
T Consensus 121 ~~i~~~~~ 128 (225)
T 3klo_A 121 KGMSKILQ 128 (225)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 66665543
No 345
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=83.63 E-value=5.2 Score=31.08 Aligned_cols=60 Identities=25% Similarity=0.315 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEccc----ccCCCCHHHHHHHHHHH
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSS----VFGAPEPAHVISLMRKS 107 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsa----if~~~d~~~~~~~l~~~ 107 (115)
.++.++++++.. +.|+.+=|-.+.+....+.++|+|.++++.. ........+.+.++++.
T Consensus 240 ~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~a 303 (392)
T 2nzl_A 240 SWEDIKWLRRLT-SLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEA 303 (392)
T ss_dssp CHHHHHHHC--C-CSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHH
Confidence 566678887764 6889988888999999999999999999422 22233334555555443
No 346
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=83.56 E-value=1.1 Score=33.32 Aligned_cols=71 Identities=21% Similarity=0.443 Sum_probs=48.8
Q ss_pred EEEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCC
Q 033598 30 LVMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGA 94 (115)
Q Consensus 30 lvm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~ 94 (115)
+++.-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.++ .+.++|++-+|++..++
T Consensus 169 ~vIAYEPvWAIG-TG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a 247 (261)
T 1m6j_A 169 IILAYEPVWAIG-TGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDA 247 (261)
T ss_dssp EEEEECCGGGSS-SSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSH
T ss_pred EEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhCh
Confidence 3447777 4 45555544444433 2332 22 2488999999999999986 57899999999999887
Q ss_pred CCHHHHH
Q 033598 95 PEPAHVI 101 (115)
Q Consensus 95 ~d~~~~~ 101 (115)
+++.+-+
T Consensus 248 ~~F~~ii 254 (261)
T 1m6j_A 248 AKFKTII 254 (261)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665444
No 347
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=83.31 E-value=6.1 Score=24.42 Aligned_cols=76 Identities=9% Similarity=0.086 Sum_probs=49.2
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-.--|+.. .++-++++++.. +++|+.+. +.-+.+......++|++.++. +.-++.+-.
T Consensus 62 ~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~ 129 (149)
T 1k66_A 62 RPAVILLDLNLPGTD-------GREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV-----KPLEIDRLT 129 (149)
T ss_dssp CCSEEEECSCCSSSC-------HHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHH
T ss_pred CCcEEEEECCCCCCC-------HHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe-----CCCCHHHHH
Confidence 578887654445533 455677777654 56776554 555677888889999998743 444666666
Q ss_pred HHHHHHHHHHh
Q 033598 102 SLMRKSVEDAQ 112 (115)
Q Consensus 102 ~~l~~~~~~~~ 112 (115)
..++..++.+.
T Consensus 130 ~~i~~~~~~~~ 140 (149)
T 1k66_A 130 ETVQTFIKYWL 140 (149)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 66666665543
No 348
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=83.22 E-value=2 Score=29.87 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=39.5
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE--EcCCChhhHHHHHHcCCCEEEEcc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV--DGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~--dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+.++.+++ .++|+|.+- .+. +...+.++++++.. +.++.+ .+-.+.+.+..+.++|||.+.+++
T Consensus 23 ~~~~~~~~--~G~~~i~l~--~~~-------~~~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 23 AHVGAVID--AGFDAVEIP--LNS-------PQWEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp HHHHHHHH--HTCCEEEEE--TTS-------TTHHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHH--CCCCEEEEe--CCC-------hhHHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 44555551 479998762 221 23345677776643 344433 333567789999999999998664
No 349
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=83.13 E-value=5.6 Score=23.87 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=47.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+..| ++-++++++ .++.|+.+. +.-+.+......++|++.++. +.-++.+-..
T Consensus 45 ~~~dlvi~d~~l~~~~g-------~~~~~~l~~-~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~ 111 (122)
T 1zgz_A 45 QSVDLILLDINLPDENG-------LMLTRALRE-RSTVGIILVTGRSDRIDRIVGLEMGADDYVT-----KPLELRELVV 111 (122)
T ss_dssp SCCSEEEEESCCSSSCH-------HHHHHHHHT-TCCCEEEEEESSCCHHHHHHHHHHTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCCh-------HHHHHHHHh-cCCCCEEEEECCCChhhHHHHHHhCHHHHcc-----CCCCHHHHHH
Confidence 45788876555566543 445666766 467776654 445666777888999998744 4446666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 112 ~i~~~~~~ 119 (122)
T 1zgz_A 112 RVKNLLWR 119 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 350
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=82.85 E-value=4.7 Score=29.33 Aligned_cols=75 Identities=12% Similarity=0.145 Sum_probs=53.3
Q ss_pred EecC--CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCC
Q 033598 6 ALKP--GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGAN 83 (115)
Q Consensus 6 al~p--~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad 83 (115)
+..| .++.+.++.+.+ .++|.|.+.. ..|.. ....++.++++|+ .++|+..-++-+ +.+ ++|+|
T Consensus 14 ~gDP~~~~t~~~~~~l~~--~GaD~IelG~----S~g~t-~~~~~~~v~~ir~--~~~Pivl~~y~~-n~i----~~gvD 79 (234)
T 2f6u_A 14 KLDPDRTNTDEIIKAVAD--SGTDAVMISG----TQNVT-YEKARTLIEKVSQ--YGLPIVVEPSDP-SNV----VYDVD 79 (234)
T ss_dssp EECTTSCCCHHHHHHHHT--TTCSEEEECC----CTTCC-HHHHHHHHHHHTT--SCCCEEECCSSC-CCC----CCCSS
T ss_pred eeCCCccccHHHHHHHHH--cCCCEEEECC----CCCCC-HHHHHHHHHHhcC--CCCCEEEecCCc-chh----hcCCC
Confidence 4555 466777777762 5899998854 22322 3567788888887 489999999985 222 78999
Q ss_pred EEEEcccccCC
Q 033598 84 CIVAGSSVFGA 94 (115)
Q Consensus 84 ~iv~Gsaif~~ 94 (115)
.+++-+-.+..
T Consensus 80 g~iipdLp~ee 90 (234)
T 2f6u_A 80 YLFVPTVLNSA 90 (234)
T ss_dssp EEEEEEETTBS
T ss_pred EEEEcccCCCC
Confidence 99998877653
No 351
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=82.84 E-value=5.7 Score=23.75 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=44.9
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.+++-..-|+.. .++.++++++..++.|+.+..+ -+.+......++|++.++. +.-++.+-...
T Consensus 47 ~~dlil~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~ 114 (120)
T 1tmy_A 47 KPDIVTMDITMPEMN-------GIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIV-----KPFQPSRVVEA 114 (120)
T ss_dssp CCSEEEEECSCGGGC-------HHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEE-----SSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCc-------HHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEe-----CCCCHHHHHHH
Confidence 578887655556533 4455777777777788665544 5677778888999998743 44455554444
Q ss_pred HHH
Q 033598 104 MRK 106 (115)
Q Consensus 104 l~~ 106 (115)
++.
T Consensus 115 i~~ 117 (120)
T 1tmy_A 115 LNK 117 (120)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 352
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=82.76 E-value=4 Score=30.09 Aligned_cols=45 Identities=16% Similarity=0.068 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCC-------hhhHHHHHHcCCCEEEEccccc
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLG-------PSTIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~-------~~ni~~l~~~Gad~iv~Gsaif 92 (115)
.++-++++|+. .++|+.+.|=.| ..-++.+.++|+|++++...-+
T Consensus 79 ~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ 130 (271)
T 1ujp_A 79 ALELVREVRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP 130 (271)
T ss_dssp HHHHHHHHHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG
T ss_pred HHHHHHHHHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH
Confidence 45668888877 689998875333 3456678999999888875544
No 353
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=82.74 E-value=6.3 Score=24.19 Aligned_cols=74 Identities=11% Similarity=0.042 Sum_probs=48.4
Q ss_pred CCCEEEEEeeeC-CCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 25 PVEMVLVMTVEP-GFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 25 ~vD~vlvm~v~p-G~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
..|.|++-.-.| +.. .++-++++++. ++.|+.+. +.-+.+......+.|++.++. +.-++.+-..
T Consensus 54 ~~dlii~d~~~~~~~~-------g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~ 120 (140)
T 3cg0_A 54 RPDIALVDIMLCGALD-------GVETAARLAAG-CNLPIIFITSSQDVETFQRAKRVNPFGYLA-----KPVAADTLHR 120 (140)
T ss_dssp CCSEEEEESSCCSSSC-------HHHHHHHHHHH-SCCCEEEEECCCCHHHHHHHHTTCCSEEEE-----ESCCHHHHHH
T ss_pred CCCEEEEecCCCCCCC-------HHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHhcCCCEEEe-----CCCCHHHHHH
Confidence 588888765555 333 34556666666 67776654 555677778889999998744 3446666666
Q ss_pred HHHHHHHHH
Q 033598 103 LMRKSVEDA 111 (115)
Q Consensus 103 ~l~~~~~~~ 111 (115)
.++..++..
T Consensus 121 ~i~~~~~~~ 129 (140)
T 3cg0_A 121 SIEMAIHKK 129 (140)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 677666543
No 354
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=82.69 E-value=6.9 Score=25.28 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=42.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh---hHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS---TIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~---ni~~l~~~Gad~iv~ 87 (115)
+..+.++.+. . ...|.|++-.--|+.. .++-++++++..+ .++.+..+-..+ .+....++|++.++.
T Consensus 59 ~~~~al~~l~-~-~~~dlvilD~~l~~~~-------g~~l~~~lr~~~~-~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~ 128 (164)
T 3t8y_A 59 DGLEAVEKAI-E-LKPDVITMDIEMPNLN-------GIEALKLIMKKAP-TRVIMVSSLTEEGAAITIEALRNGAVDFIT 128 (164)
T ss_dssp SHHHHHHHHH-H-HCCSEEEECSSCSSSC-------HHHHHHHHHHHSC-CEEEEEESSCCTTCHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHhc-c-CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCC-ceEEEEecCCccchHHHHHHHHcCcCEEEe
Confidence 3444444433 1 3578887655556544 4555777777766 777766665443 466788999998865
Q ss_pred c
Q 033598 88 G 88 (115)
Q Consensus 88 G 88 (115)
=
T Consensus 129 K 129 (164)
T 3t8y_A 129 K 129 (164)
T ss_dssp C
T ss_pred C
Confidence 4
No 355
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=82.58 E-value=3.4 Score=30.30 Aligned_cols=56 Identities=20% Similarity=0.289 Sum_probs=37.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEEEcCCC-hhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEVDGGLG-PSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~dGGI~-~~ni~~l~~~Gad~i 85 (115)
.++|||= +..||+...- +++-++-+++. .++++|-+.|||+ .+.+..++++||+-+
T Consensus 169 aGADfVK---TSTGf~~ggA---t~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 169 AGAEYVK---TSTGFGTHGA---TPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRI 226 (239)
T ss_dssp HTCSEEE---CCCSSSSCCC---CHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEE
T ss_pred HCcCEEE---CCCCCCCCCC---CHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccce
Confidence 4899995 5567653222 22334444433 3469999999998 477888899999955
No 356
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=81.62 E-value=4 Score=30.19 Aligned_cols=69 Identities=16% Similarity=0.276 Sum_probs=46.6
Q ss_pred EEEeeeCCC---CCcccchhHHHHH-HHHHhh---------CCCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCCC
Q 033598 30 LVMTVEPGF---GGQKFMPEMMDKV-RSLRNR---------YPSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 30 lvm~v~pG~---~gq~~~~~~~~ki-~~l~~~---------~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~~ 95 (115)
+++.-+|-. +|....++..+.+ +.+|+. ..+++|.-=|+++++|+.++ .+.++|++-+|++-.+ +
T Consensus 164 ~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~ 242 (255)
T 3qst_A 164 VVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE-A 242 (255)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS-T
T ss_pred EEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh-H
Confidence 345777821 4665555444443 233332 13588999999999999886 5789999999999777 4
Q ss_pred CHHH
Q 033598 96 EPAH 99 (115)
Q Consensus 96 d~~~ 99 (115)
+..+
T Consensus 243 ~F~~ 246 (255)
T 3qst_A 243 GFIN 246 (255)
T ss_dssp THHH
T ss_pred HHHH
Confidence 6543
No 357
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=81.46 E-value=2 Score=40.34 Aligned_cols=68 Identities=16% Similarity=0.242 Sum_probs=47.9
Q ss_pred CCCEEEEEeeeCCCCCcc-----cchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHH-----------HcCCCEEEE
Q 033598 25 PVEMVLVMTVEPGFGGQK-----FMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAA-----------SAGANCIVA 87 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~-----~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~-----------~~Gad~iv~ 87 (115)
++|.++++.+.-+-+|-+ +....+..+.++++. .++|+.+.|||- .+-+...+ ..|||++-+
T Consensus 723 g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~-~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~ 801 (2051)
T 2uv8_G 723 HPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRH-PNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLF 801 (2051)
T ss_dssp STTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTC-TTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEEC
T ss_pred CCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeee
Confidence 788876665554433322 234455667888776 379999999995 45556666 799999999
Q ss_pred cccccC
Q 033598 88 GSSVFG 93 (115)
Q Consensus 88 Gsaif~ 93 (115)
|+....
T Consensus 802 GTrf~~ 807 (2051)
T 2uv8_G 802 GSRVMI 807 (2051)
T ss_dssp SGGGTT
T ss_pred chHHHh
Confidence 998664
No 358
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=81.41 E-value=6.3 Score=26.77 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gs 89 (115)
+..+.++.+. . ...|.|++-..-|+.. .++-++++++..+++|+.+..+ -+.+......++||+.++
T Consensus 39 ~~~~a~~~~~-~-~~~dlvllD~~l~~~~-------g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l--- 106 (233)
T 1ys7_A 39 DGAEALRSAT-E-NRPDAIVLDINMPVLD-------GVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYL--- 106 (233)
T ss_dssp SHHHHHHHHH-H-SCCSEEEEESSCSSSC-------HHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEE---
T ss_pred CHHHHHHHHH-h-CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEE---
Confidence 3334444333 2 4689888765556643 4556777777767888766554 455666777889999874
Q ss_pred cccCCCCHHHHHHHHHHHHHH
Q 033598 90 SVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 90 aif~~~d~~~~~~~l~~~~~~ 110 (115)
.+.-++.+-...++..++.
T Consensus 107 --~Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 107 --VKPFVLAELVARVKALLRR 125 (233)
T ss_dssp --ESSCCHHHHHHHHHHHHHH
T ss_pred --eCCCCHHHHHHHHHHHHhh
Confidence 3445666666667666654
No 359
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=81.35 E-value=6.5 Score=28.16 Aligned_cols=58 Identities=22% Similarity=0.315 Sum_probs=38.8
Q ss_pred HHHHHHHHhhCCCCcEE----EE-cC----C--ChhhHHHHHHcCCCEEEEccccc-CCCCHHHHHHHHHH
Q 033598 48 MDKVRSLRNRYPSLDIE----VD-GG----L--GPSTIAEAASAGANCIVAGSSVF-GAPEPAHVISLMRK 106 (115)
Q Consensus 48 ~~ki~~l~~~~~~~~i~----~d-GG----I--~~~ni~~l~~~Gad~iv~Gsaif-~~~d~~~~~~~l~~ 106 (115)
.+-|+++|+.. ++|+. -| || | +.+.+.++.++|||++++++... +.+...+.++.+++
T Consensus 58 ~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 58 IENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp HHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH
Confidence 45678887764 67754 22 22 2 34578899999999999998754 33455666666654
No 360
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.30 E-value=15 Score=27.55 Aligned_cols=82 Identities=18% Similarity=0.085 Sum_probs=48.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCCh-hhHH---HHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGP-STIA---EAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~-~ni~---~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+. +.+. ...++|||.+.+..-.|..
T Consensus 57 ~Gv~Gi~v~----GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 132 (315)
T 3na8_A 57 GGVHAIAPL----GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWK 132 (315)
T ss_dssp TTCSEEECS----SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 589988644 66666543222233 3333333 23466554 333333 3333 4578999999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 133 ~s~~~l~~~f~~va~ 147 (315)
T 3na8_A 133 LNEAEVFQHYRAVGE 147 (315)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 777666666666544
No 361
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=81.28 E-value=12 Score=26.27 Aligned_cols=84 Identities=14% Similarity=0.150 Sum_probs=54.2
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+..+.++.+. . ...|.|++-..-|+ ...++-++++++ .+++|+.+ .+--+.+.+....++||+.++.
T Consensus 69 ~~~~al~~~~-~-~~~DlvllD~~lp~-------~~G~~l~~~lr~-~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~-- 136 (249)
T 3q9s_A 69 SAMNGLIKAR-E-DHPDLILLDLGLPD-------FDGGDVVQRLRK-NSALPIIVLTARDTVEEKVRLLGLGADDYLI-- 136 (249)
T ss_dssp SHHHHHHHHH-H-SCCSEEEEECCSCH-------HHHHHHHHHHHT-TCCCCEEEEESCCSHHHHHHHHHHTCSEEEE--
T ss_pred CHHHHHHHHh-c-CCCCEEEEcCCCCC-------CCHHHHHHHHHc-CCCCCEEEEECCCCHHHHHHHHHCCCcEEEE--
Confidence 3344444433 2 46888887655565 245666778877 56777665 4555667888899999998854
Q ss_pred cccCCCCHHHHHHHHHHHHH
Q 033598 90 SVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 90 aif~~~d~~~~~~~l~~~~~ 109 (115)
+.-++.+-...++..++
T Consensus 137 ---Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 137 ---KPFHPDELLARVKVQLR 153 (249)
T ss_dssp ---SSCCHHHHHHHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHHHh
Confidence 44566666666666554
No 362
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=81.14 E-value=1.3 Score=33.89 Aligned_cols=77 Identities=16% Similarity=0.208 Sum_probs=51.3
Q ss_pred EEEeeeCCC---CCcccchhHHHH-HHHHHhh--------CCCCcEEEEcCCChhhHHH--HHHcCCCEEEEcccccCCC
Q 033598 30 LVMTVEPGF---GGQKFMPEMMDK-VRSLRNR--------YPSLDIEVDGGLGPSTIAE--AASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 30 lvm~v~pG~---~gq~~~~~~~~k-i~~l~~~--------~~~~~i~~dGGI~~~ni~~--l~~~Gad~iv~Gsaif~~~ 95 (115)
++++-+|-. +|..-.++..+. .+.+|+. ..+++|.-=|+++++|+.+ + ..++|++-+|++-.+.+
T Consensus 218 vVIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~~~n~~~~~l-~~dVDG~LVGgASL~a~ 296 (310)
T 3s6d_A 218 VIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAGPGLWGPGGL-GKEVDGMFLGRFAHDIE 296 (310)
T ss_dssp EEEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEECTTTTTTTSG-GGTCSEEEECGGGGSHH
T ss_pred eEEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccCHHHHhhhcc-cCCCCEEEeeheeecHH
Confidence 456778832 455544444333 2233332 2358899999999999998 6 58999999999999888
Q ss_pred CHHHHHHHHHHH
Q 033598 96 EPAHVISLMRKS 107 (115)
Q Consensus 96 d~~~~~~~l~~~ 107 (115)
++.+-++++.+.
T Consensus 297 ~F~~Ii~e~~~~ 308 (310)
T 3s6d_A 297 GVRKVVREVEES 308 (310)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 877777666543
No 363
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=81.13 E-value=4.3 Score=29.10 Aligned_cols=66 Identities=20% Similarity=0.250 Sum_probs=45.8
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
++..+.+++ .+++.+.+- +. .+...+.++++++.++++.+.+.-=++.+.++...++|||+++++.
T Consensus 41 ~~~~~al~~--gGv~~iel~-----~k----~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~ 106 (225)
T 1mxs_A 41 LPLADALAA--GGIRTLEVT-----LR----SQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG 106 (225)
T ss_dssp HHHHHHHHH--TTCCEEEEE-----SS----STHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS
T ss_pred HHHHHHHHH--CCCCEEEEe-----cC----CccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC
Confidence 345666662 479988763 11 2355677888888777766555444567889999999999998774
No 364
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=81.08 E-value=8.1 Score=25.13 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=54.9
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcE-EEEcCCChhhHHHHHHcCCCEEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDI-EVDGGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i-~~dGGI~~~ni~~l~~~Gad~iv 86 (115)
.+..+.++.+- . ..+|.|++--.-||-+| ++-++++|+. .+++|| .+.+--+.+...+..++|||.++
T Consensus 44 ~~g~~al~~~~-~-~~~DlillD~~MP~mdG-------~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl 114 (134)
T 3to5_A 44 DDGLTALPMLK-K-GDFDFVVTDWNMPGMQG-------IDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYI 114 (134)
T ss_dssp SSHHHHHHHHH-H-HCCSEEEEESCCSSSCH-------HHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHH-h-CCCCEEEEcCCCCCCCH-------HHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEE
Confidence 34445555443 2 46899988777788654 4556666653 356775 46677778889999999999874
Q ss_pred EcccccCCCCHHHHHHHHHHHH
Q 033598 87 AGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 87 ~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
.+.=++.+-...+++.+
T Consensus 115 -----~KP~~~~~L~~~i~~~l 131 (134)
T 3to5_A 115 -----VKPFTAATLKEKLDKIF 131 (134)
T ss_dssp -----ESSCCHHHHHHHHHHHC
T ss_pred -----ECCCCHHHHHHHHHHHH
Confidence 34336655555555443
No 365
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=80.98 E-value=11 Score=26.76 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=50.0
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-Ch-hhHHHHHHcCCCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GP-STIAEAASAGANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~-~ni~~l~~~Gad~iv~Gsa 90 (115)
.+.++.+.+ .++|++.+--..-.|-- . .....+.++++|+.. +.++.+.==+ ++ +-++.+.++|||++.++..
T Consensus 20 ~~~i~~~~~--~Gad~ihldi~DG~fvp-~-~~~g~~~v~~lr~~~-~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 20 GEEIKAVDE--AGADWIHVDVMDGRFVP-N-ITIGPLIVDAIRPLT-KKTLDVHLMIVEPEKYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp HHHHHHHHH--TTCSEEEEEEEBSSSSS-C-BCBCHHHHHHHGGGC-CSEEEEEEESSSGGGTHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHH--cCCCEEEEEEEecCCCc-c-hhhhHHHHHHHHhhc-CCcEEEEEEccCHHHHHHHHHHcCCCEEEECcc
Confidence 345555541 47999876654322211 1 122335677777664 3444422222 22 3578899999999999854
Q ss_pred ccCCCCHHHHHHHHHH
Q 033598 91 VFGAPEPAHVISLMRK 106 (115)
Q Consensus 91 if~~~d~~~~~~~l~~ 106 (115)
=+..+.+.+.++.+++
T Consensus 95 ~~~~~~~~~~~~~i~~ 110 (230)
T 1tqj_A 95 HNASPHLHRTLCQIRE 110 (230)
T ss_dssp TTTCTTHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHH
Confidence 1223566666666654
No 366
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=80.83 E-value=7.2 Score=28.22 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=50.3
Q ss_pred HHhHHHhHhCCCCCCEEEEEee----eCCCCCcccchhHHHHHHHH---HhhCCCCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 13 VEEVYPLVEGANPVEMVLVMTV----EPGFGGQKFMPEMMDKVRSL---RNRYPSLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v----~pG~~gq~~~~~~~~ki~~l---~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
++.+++++. ++.+|.+.+.+- .-|..++...+..+.-++++ .+. .++++.+..+ +++..+.+.+.|.+.+
T Consensus 158 v~~~~eIa~-~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a-~G~~~~v~~~-d~~~~~~~~~~G~~~~ 234 (256)
T 1dxe_A 158 VDNVDAIAA-TEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASA-HGKPSGILAP-VEADARRYLEWGATFV 234 (256)
T ss_dssp HHTHHHHHT-STTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHH-TTCCEEEECC-SHHHHHHHHHTTCCEE
T ss_pred HHhHHHHhC-CCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH-hCCceEEecC-CHHHHHHHHHcCCCEE
Confidence 467777773 358999998764 33555555555444444444 222 2566666665 8999999999999999
Q ss_pred EEccc
Q 033598 86 VAGSS 90 (115)
Q Consensus 86 v~Gsa 90 (115)
++++.
T Consensus 235 s~~~d 239 (256)
T 1dxe_A 235 AVGSD 239 (256)
T ss_dssp EEEEH
T ss_pred EechH
Confidence 99964
No 367
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=80.48 E-value=4.4 Score=24.13 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=35.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv 86 (115)
...|.+++-.--|+.. .++.++++++..++.|+.+..+-.... ....+.|++.++
T Consensus 44 ~~~dlvl~D~~l~~~~-------g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~g~~~~l 98 (116)
T 3a10_A 44 GNYDLVILDIEMPGIS-------GLEVAGEIRKKKKDAKIILLTAYSHYR-SDMSSWAADEYV 98 (116)
T ss_dssp SCCSEEEECSCCSSSC-------HHHHHHHHHHHCTTCCEEEEESCGGGG-GCGGGGGSSEEE
T ss_pred CCCCEEEEECCCCCCC-------HHHHHHHHHccCCCCeEEEEECCcchH-HHHHhccccceE
Confidence 4578887655556543 345567777766788887776654444 556678888764
No 368
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=80.46 E-value=7.7 Score=23.70 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=52.1
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEEE-cCCChhhHHHHHHcCCCEEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVD-GGLGPSTIAEAASAGANCIV 86 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv 86 (115)
.+..+.++.+... ...|.|++-..-|+.. .++-++++++. .+++|+.+. +--+.+......++|++.++
T Consensus 37 ~~~~~a~~~~~~~-~~~dlvi~D~~~p~~~-------g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l 108 (129)
T 3h1g_A 37 EHGVEAWEKLDAN-ADTKVLITDWNMPEMN-------GLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYI 108 (129)
T ss_dssp SSHHHHHHHHHHC-TTCCEEEECSCCSSSC-------HHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHhC-CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEE
Confidence 3444555544321 3578877654556644 44556777764 356776654 44556677788899999874
Q ss_pred EcccccCCCCHHHHHHHHHHHH
Q 033598 87 AGSSVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 87 ~Gsaif~~~d~~~~~~~l~~~~ 108 (115)
. +.-++.+-...++..+
T Consensus 109 ~-----KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 109 V-----KPFTPQVLKEKLEVVL 125 (129)
T ss_dssp E-----SCCCHHHHHHHHHHHH
T ss_pred e-----CCCCHHHHHHHHHHHh
Confidence 3 4456666666665544
No 369
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=80.45 E-value=16 Score=27.20 Aligned_cols=82 Identities=12% Similarity=0.179 Sum_probs=48.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChhh----HHHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPST----IAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~n----i~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+.+. .+...++|||.+.+..-.|..
T Consensus 48 ~Gv~gi~v~----GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 123 (304)
T 3l21_A 48 QGCDGLVVS----GTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSK 123 (304)
T ss_dssp TTCSEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cCCCEEEeC----ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 589998654 66776553222233 3333333 33566554 33333332 234567899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 124 ~s~~~l~~~f~~va~ 138 (304)
T 3l21_A 124 PPQRGLQAHFTAVAD 138 (304)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 777666666665543
No 370
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=80.20 E-value=8.7 Score=24.16 Aligned_cols=74 Identities=8% Similarity=0.114 Sum_probs=47.8
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-..-|+.+| ++-++++++.. +++|+.+- +.-+.+.+....++||+.++ .+.-++.+-.
T Consensus 61 ~~dlillD~~lp~~~g-------~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L~ 128 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDG-------REVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYL-----TKSRNLKDLF 128 (149)
T ss_dssp CCSEEEECSCCSSSCH-------HHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEE-----ECCSSHHHHH
T ss_pred CCCEEEEeCCCCCCcH-------HHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEE-----ECCCCHHHHH
Confidence 5788887655676544 44566666542 56776655 44566778888899999874 3444666666
Q ss_pred HHHHHHHHH
Q 033598 102 SLMRKSVED 110 (115)
Q Consensus 102 ~~l~~~~~~ 110 (115)
..++...+.
T Consensus 129 ~~i~~~~~~ 137 (149)
T 1i3c_A 129 KMVQGIESF 137 (149)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665543
No 371
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=80.19 E-value=4.3 Score=29.69 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=49.2
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeee----CCCCCcccchhHHHHHHHHHhh--CCCCcEEEEcCCChhhH-HHHHHcCCCE
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVE----PGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVDGGLGPSTI-AEAASAGANC 84 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~----pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~~~ni-~~l~~~Gad~ 84 (115)
-++.+++++ +++.+|.+.+.+-+ -|..++...+..+.-++++... ..++++.+-++ +++.. +.+.+.|.+.
T Consensus 155 av~~~~eIa-a~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~-~~~~~~~~~~~~G~~~ 232 (261)
T 3qz6_A 155 AVEDIDSIL-AVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTA-ADAAKMGWAVERGAQM 232 (261)
T ss_dssp HHHTHHHHH-TSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEES-SCGGGGHHHHHTTCCE
T ss_pred HHHHHHHHh-CCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeC-CHHHHHHHHHHCCCCE
Confidence 346777777 33689999886533 3444444444443334433211 12577666655 78888 9999999999
Q ss_pred EEEccc
Q 033598 85 IVAGSS 90 (115)
Q Consensus 85 iv~Gsa 90 (115)
+++++.
T Consensus 233 ~s~~~D 238 (261)
T 3qz6_A 233 LLWSGD 238 (261)
T ss_dssp EEEEEH
T ss_pred EEEhhH
Confidence 999964
No 372
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=80.05 E-value=2.4 Score=34.44 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=46.9
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc--CCCh----hhHHHHHHcC-CC
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG--GLGP----STIAEAASAG-AN 83 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG--GI~~----~ni~~l~~~G-ad 83 (115)
+.++.+++.++. .+.|-+.+....|.+- ++....-++.|.++++.+ ++|+.||. |+.. +-.+...+.| ||
T Consensus 200 id~e~le~aI~e-~ga~~i~~V~~Ttt~y-~p~~~ddI~eIaeIch~~-gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 200 TDLKAVEAKVQE-LGPDCILCIHSTTSCF-APRVPDRLEELAVICANY-DIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp ECHHHHHHHHHH-HCGGGEEEEEEECSCC-TTBCCCCHHHHHHHHHHH-TCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHh-cCCCcEEEEEecCCCC-CCcccccHHHHHHHHHHc-CCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 467888888854 2456666665665543 233335566777777664 79999996 3333 2233466779 99
Q ss_pred EEEE
Q 033598 84 CIVA 87 (115)
Q Consensus 84 ~iv~ 87 (115)
.+|.
T Consensus 277 ~vVq 280 (501)
T 3hl2_A 277 AFVQ 280 (501)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9884
No 373
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=79.82 E-value=11 Score=25.28 Aligned_cols=75 Identities=13% Similarity=0.209 Sum_probs=50.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.+ .++-++++++..++.|+.+..+ -+.+......++||+.++. +.-++.+-..
T Consensus 42 ~~~dlvllD~~lp~~~-------g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~L~~ 109 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDYS-------GYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVT-----KPFNPEILLA 109 (220)
T ss_dssp SCCSEEEEESBCSSSB-------HHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEE-----CCCCHHHHHH
Confidence 5678887765566643 4556777777767888665544 5667778888999998743 4446666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 110 ~i~~~~~~ 117 (220)
T 1p2f_A 110 RVKRFLER 117 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcc
Confidence 66665543
No 374
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=79.57 E-value=7.3 Score=29.54 Aligned_cols=78 Identities=14% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCCHHhHHHhHhCCCCCCEEEE--EeeeCCCC--CcccchhHHHHHHHHHhhCCCCcEEEEc------------------
Q 033598 10 GTSVEEVYPLVEGANPVEMVLV--MTVEPGFG--GQKFMPEMMDKVRSLRNRYPSLDIEVDG------------------ 67 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~--gq~~~~~~~~ki~~l~~~~~~~~i~~dG------------------ 67 (115)
.|..+...++++. -++|.+=+ .++|--|. +.+ .-.+++|+++++. +++|++.=|
T Consensus 154 yT~Peea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~~~p--~Ld~~~L~~I~~~-~~~PLVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 154 LVNPKEAEQFVKE-SQVDYLAPAIGTSHGAFKFKGEP--KLDFERLQEVKRL-TNIPLVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp SCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCCSSSC--CCCHHHHHHHHHH-HCSCEEESSCCCCCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHH-HCCCEEEEecCCcccccCCCCCC--ccCHHHHHHHHhc-CCCCeEEeCCCCcchHHHHHHHHhcCc
Confidence 4777777787743 47997643 23443343 211 2234455555444 468999999
Q ss_pred -----CCChhhHHHHHHcCCCEEEEcccc
Q 033598 68 -----GLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 68 -----GI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
|+..+.+++..+.|+.-+=+.+.+
T Consensus 230 ~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl 258 (307)
T 3n9r_A 230 LKGSKGVPFEFLQESVKGGINKVNTDTDL 258 (307)
T ss_dssp CTTCBCCCHHHHHHHHHTTEEEEEECHHH
T ss_pred cCCCCCCCHHHHHHHHHcCceEEEechHH
Confidence 889999999999999999998765
No 375
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=79.55 E-value=3.5 Score=31.82 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
..+.++++++.. ++|+.+=|-.+.+.+..+.++|+|.++++
T Consensus 213 ~~~~i~~i~~~~-~~Pv~vkgv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 213 NWEALRWLRDLW-PHKLLVKGLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CHHHHHHHHHHC-CSEEEEEEECCHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEc
Confidence 356788888765 68888877789999999999999999995
No 376
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=79.49 E-value=13 Score=27.75 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=56.2
Q ss_pred CCCHHhHHHhHhCCCCCCEEEE--EeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc--CCChhhHHHHHHcCCCEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLV--MTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG--GLGPSTIAEAASAGANCI 85 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG--GI~~~ni~~l~~~Gad~i 85 (115)
-|..+...++++. -++|.+=+ .++|--|.|.+- -.+++|+++++.. ++|++.=| |+..+.++...+.|+.-+
T Consensus 154 ~T~Peea~~Fv~~-TgvD~LAvaiGt~HG~Y~~~p~--Ld~~~L~~I~~~~-~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 154 LTDPQEAKRFVEL-TGVDSLAVAIGTAHGLYSKTPK--IDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp SCCHHHHHHHHHH-HCCSEEEECSSCCSSCCSSCCC--CCHHHHHHHHHHC-CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHHH-HCCCEEEeecCccccCcCCCCc--cCHHHHHHHHHhc-CCCEEEECCCCCCHHHHHHHHHCCCeEE
Confidence 3778888888744 57896532 223333544332 3456677777664 69999999 899999999999999999
Q ss_pred EEcccc
Q 033598 86 VAGSSV 91 (115)
Q Consensus 86 v~Gsai 91 (115)
=+++.+
T Consensus 230 Ni~Tdl 235 (286)
T 1gvf_A 230 NVATEL 235 (286)
T ss_dssp EECHHH
T ss_pred EEChHH
Confidence 998766
No 377
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=79.46 E-value=15 Score=27.89 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=41.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
..+|.|++-..-|+.+ .++-++++++..+++|+. +.+--+.+...+..+.||+.++.
T Consensus 43 ~~~DlvllD~~mp~~d-------G~ell~~lr~~~~~~pvIvlT~~~~~~~~~~a~~~Ga~dyl~ 100 (387)
T 1ny5_A 43 KHFNVVLLDLLLPDVN-------GLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLT 100 (387)
T ss_dssp SCCSEEEEESBCSSSB-------HHHHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEeCCCCCCC-------HHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHhcCceEEec
Confidence 4689998776667644 445577777777788865 44555778888899999998754
No 378
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=79.34 E-value=5.7 Score=30.44 Aligned_cols=45 Identities=20% Similarity=0.330 Sum_probs=32.6
Q ss_pred HHHHHHHhhCCCCcEE-EEcCCChhhHH----HHHHcCC--CEEEEcccccCC
Q 033598 49 DKVRSLRNRYPSLDIE-VDGGLGPSTIA----EAASAGA--NCIVAGSSVFGA 94 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~-~dGGI~~~ni~----~l~~~Ga--d~iv~Gsaif~~ 94 (115)
+.++++.+. .++|++ ..||.+.+.+. ...++|| .++.+|+++|+.
T Consensus 235 ~~f~~~~~a-~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 235 QAFREQEAS-TDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHHHHHHHT-CSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred HHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHHHh
Confidence 335554444 368865 69999875544 4578999 999999999985
No 379
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=79.34 E-value=8.1 Score=23.30 Aligned_cols=85 Identities=20% Similarity=0.239 Sum_probs=51.4
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh--CCCCcEEEE-cCCChhhHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVD-GGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.++.+. . ...|.+++-..-|+..| ++.++++++. .++.|+.+. +.-+.+......+.|++.++
T Consensus 37 ~~~~a~~~~~-~-~~~dlvi~D~~l~~~~g-------~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l- 106 (128)
T 1jbe_A 37 DGVDALNKLQ-A-GGYGFVISDWNMPNMDG-------LELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYV- 106 (128)
T ss_dssp SHHHHHHHHT-T-CCCCEEEEESCCSSSCH-------HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEE-
T ss_pred CHHHHHHHHH-h-cCCCEEEEeCCCCCCCH-------HHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCcee-
Confidence 3344444332 2 46898876555566443 4456677663 356776654 55567778889999999874
Q ss_pred cccccCCCCHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~ 109 (115)
.+.-++.+-...++..++
T Consensus 107 ----~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 107 ----VKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp ----ESSCCHHHHHHHHHHHHH
T ss_pred ----ecCCCHHHHHHHHHHHHH
Confidence 344466655555655544
No 380
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=79.29 E-value=4.6 Score=30.94 Aligned_cols=42 Identities=26% Similarity=0.230 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.++.++++++.. +.|+.+=|-.+.+.+..+.++|+|.++++.
T Consensus 213 ~~~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECC
Confidence 456688888775 789998888899999999999999999964
No 381
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=79.16 E-value=12 Score=27.07 Aligned_cols=57 Identities=16% Similarity=0.305 Sum_probs=37.8
Q ss_pred CCCCEEEEEeeeCCCC----------CcccchhHHHHHHHH-HhhCCCCcEEEEcCCC-hhhHHHHHHc---CCC
Q 033598 24 NPVEMVLVMTVEPGFG----------GQKFMPEMMDKVRSL-RNRYPSLDIEVDGGLG-PSTIAEAASA---GAN 83 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~----------gq~~~~~~~~ki~~l-~~~~~~~~i~~dGGI~-~~ni~~l~~~---Gad 83 (115)
.++|||= ...||. ...-..+..+.+++. +...+++++-+.|||+ .+....+.++ |++
T Consensus 140 aGADfVK---TSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 140 AGAHFIK---SSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp HTCSEEE---CCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred cCCCEEE---eCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 4789995 566776 222222333334433 2234579999999999 7788888899 999
No 382
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.88 E-value=18 Score=27.02 Aligned_cols=82 Identities=13% Similarity=0.278 Sum_probs=47.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCC-hhhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLG-PSTI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+ .+.+ +...++|||.+.+..-.|..
T Consensus 56 ~Gv~Gl~v~----GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~ 131 (314)
T 3qze_A 56 EGTNAIVAV----GTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK 131 (314)
T ss_dssp HTCCEEEES----SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 478988654 66666543222233 3333333 23467554 33333 2333 34567999999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 132 ~s~~~l~~~f~~va~ 146 (314)
T 3qze_A 132 PTQEGMYQHFRHIAE 146 (314)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 383
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=78.65 E-value=15 Score=25.98 Aligned_cols=87 Identities=24% Similarity=0.247 Sum_probs=55.0
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC--CCcEE-EEcCCChhhHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP--SLDIE-VDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~--~~~i~-~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.++.+- ..+.+|.|++-..-||.+ .++-++++|+..+ ++||. +.+.-+.+......++||+.+
T Consensus 156 ~~~eal~~l~-~~~~~dlvllD~~mP~~d-------G~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~y-- 225 (259)
T 3luf_A 156 HAREALATLE-QHPAIRLVLVDYYMPEID-------GISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDF-- 225 (259)
T ss_dssp SHHHHHHHHH-HCTTEEEEEECSCCSSSC-------HHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEE--
T ss_pred CHHHHHHHHh-cCCCCCEEEEcCCCCCCC-------HHHHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhhe--
Confidence 3444554433 213478887655567654 4555677776644 46665 456666777788899999987
Q ss_pred cccccCCCCHHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
|.+.-++.+-...+++.++.
T Consensus 226 ---l~KP~~~~~L~~~i~~~l~~ 245 (259)
T 3luf_A 226 ---LNQPFEPEELQCRVSHNLEA 245 (259)
T ss_dssp ---EESSCCHHHHHHHHHHHHHH
T ss_pred ---EcCCCCHHHHHHHHHHHHHh
Confidence 44555777777777766654
No 384
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=78.62 E-value=9 Score=23.43 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=47.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+. .......++.++++++..+++|+.+..+ -+.+......++|++.++. +.-++.+-..
T Consensus 46 ~~~dlvi~d~~~~~~--~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~ 118 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSG--INNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVV-----KPWDNQKLLE 118 (140)
T ss_dssp SCEEEEEEETTTTC-------CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEE-----ESCCHHHHHH
T ss_pred CCCCEEEEeCCcCCC--CCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheee-----CCCCHHHHHH
Confidence 357877764433410 0001234566777777777888766554 4566778888999998754 3345666555
Q ss_pred HHHHHHH
Q 033598 103 LMRKSVE 109 (115)
Q Consensus 103 ~l~~~~~ 109 (115)
.++..++
T Consensus 119 ~l~~~~~ 125 (140)
T 2qr3_A 119 TLLNAAS 125 (140)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6665544
No 385
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=78.47 E-value=9.9 Score=23.81 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=46.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHh-hCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRN-RYPSLDIE-VDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~-~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
...|.|++-.--|+.+|.. .++++++... ..+..|+. +.+.-+.+......++|++.++ .+.-++.+-.
T Consensus 57 ~~~dlvl~D~~mp~~~g~~----~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l-----~KP~~~~~L~ 127 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLD----MLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFL-----AKPVVAAKLL 127 (143)
T ss_dssp SCCSEEEEESCCSSSCHHH----HHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEE-----ESSCCHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHH----HHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhhee-----eCCCCHHHHH
Confidence 4689888766667755533 2333433322 13456655 4555678888889999999874 4444666555
Q ss_pred HHHHHHH
Q 033598 102 SLMRKSV 108 (115)
Q Consensus 102 ~~l~~~~ 108 (115)
..+++..
T Consensus 128 ~~l~~~~ 134 (143)
T 3m6m_D 128 DTLADLA 134 (143)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 5555543
No 386
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=78.46 E-value=17 Score=26.64 Aligned_cols=82 Identities=12% Similarity=0.210 Sum_probs=47.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChh-h---HHHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPS-T---IAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~-n---i~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+.+ . .+...++|||.+.+..-.|..
T Consensus 34 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 109 (291)
T 3tak_A 34 QGTNSIVAV----GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNK 109 (291)
T ss_dssp HTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred CCCCEEEEC----ccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 478988544 66666543223333 3333333 23566554 3333332 2 234578999999999877766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 110 ~~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 110 PTQEGLYQHYKAIAE 124 (291)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 387
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=78.24 E-value=11 Score=25.13 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=37.1
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEc
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
.+|.|++-..-|+.+| ++-++++++..+. |+. +.+.-+.+......+.|++.++.-
T Consensus 58 ~~dlvi~D~~~p~~~g-------~~~~~~l~~~~~~-pii~lt~~~~~~~~~~~~~~ga~~~l~K 114 (205)
T 1s8n_A 58 KPDLVIMDVKMPRRDG-------IDAASEIASKRIA-PIVVLTAFSQRDLVERARDAGAMAYLVK 114 (205)
T ss_dssp CCSEEEEESSCSSSCH-------HHHHHHHHHTTCS-CEEEEEEGGGHHHHHTTGGGSCEEEEEE
T ss_pred CCCEEEEeCCCCCCCh-------HHHHHHHHhcCCC-CEEEEecCCCHHHHHHHHhcCCcEEEeC
Confidence 5888887666676443 4556677665544 654 455556677777889999887543
No 388
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=78.22 E-value=7.3 Score=28.92 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=50.7
Q ss_pred CHHhHHHhHhCCCCCCEEEEEee----eCCCCCcccchhHHHHHHHH---HhhCCCCcEEEEcCCChhhHHHHHHcCCCE
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTV----EPGFGGQKFMPEMMDKVRSL---RNRYPSLDIEVDGGLGPSTIAEAASAGANC 84 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v----~pG~~gq~~~~~~~~ki~~l---~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~ 84 (115)
-++.+++++ +++.+|.+.+.+- .-|..++...+..+.-++++ .+. .++++.+-.+ +++..+.+++.|.+.
T Consensus 178 av~n~deIa-a~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aara-aG~~~gv~~~-d~~~a~~~~~~G~~~ 254 (287)
T 2v5j_A 178 AMKNLPQIL-DVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRE-SGKAPGILIA-NEQLAKRYLELGALF 254 (287)
T ss_dssp HHHTHHHHH-TSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHH-TTSEEEEECC-CHHHHHHHHHTTCSE
T ss_pred HHHHHHHHh-CcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH-cCCeeEEecC-CHHHHHHHHHhCCCE
Confidence 346788877 2258999988764 33555555555554444444 222 2566666555 889999999999999
Q ss_pred EEEccc
Q 033598 85 IVAGSS 90 (115)
Q Consensus 85 iv~Gsa 90 (115)
+++++.
T Consensus 255 ~s~~~d 260 (287)
T 2v5j_A 255 VAVGVD 260 (287)
T ss_dssp EEEEEH
T ss_pred EEECcH
Confidence 999975
No 389
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=78.02 E-value=20 Score=27.58 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=47.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChhhHH----HHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPSTIA----EAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~ni~----~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|....-..-|| ++...+. ...+|+.+ .|+.+.+..- ...++|||.+.+..-.|..
T Consensus 92 ~Gv~Gl~v~----GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k 167 (360)
T 4dpp_A 92 NGAEGVIVG----GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 167 (360)
T ss_dssp TTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEec----ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 589998654 66776543223333 3333333 23577665 4544443332 3456899999999887776
Q ss_pred CCHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKS 107 (115)
Q Consensus 95 ~d~~~~~~~l~~~ 107 (115)
++.++..+.++++
T Consensus 168 ~sq~gl~~hf~~I 180 (360)
T 4dpp_A 168 TSIEGLIAHFQSV 180 (360)
T ss_dssp CCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHH
Confidence 7766665555544
No 390
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=77.61 E-value=8.5 Score=29.09 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=54.1
Q ss_pred cCCCCHHhHHHhHhCCC--CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEE----EcCCChhhHHHHHHc
Q 033598 8 KPGTSVEEVYPLVEGAN--PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEV----DGGLGPSTIAEAASA 80 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~~~--~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~----dGGI~~~ni~~l~~~ 80 (115)
.+.++.+.+.++.+.+. ++|.|-+ ++..|........+.++.+++..+ ++|+.+ |-|.-..|.-...++
T Consensus 143 a~~~~~e~~~~ia~~~~~~Ga~~i~l----~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~a 218 (345)
T 1nvm_A 143 SHMIPAEKLAEQGKLMESYGATCIYM----ADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEE 218 (345)
T ss_dssp TTSSCHHHHHHHHHHHHHHTCSEEEE----ECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEE----CCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHc
Confidence 56777776666653312 5787743 455665555566777888888875 788888 569999999999999
Q ss_pred CCCEEE
Q 033598 81 GANCIV 86 (115)
Q Consensus 81 Gad~iv 86 (115)
||+.+=
T Consensus 219 Ga~~vd 224 (345)
T 1nvm_A 219 GCDRVD 224 (345)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 999863
No 391
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=77.41 E-value=20 Score=26.79 Aligned_cols=82 Identities=12% Similarity=0.181 Sum_probs=48.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChh-hH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPS-TI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~-ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.+ -|.+|..+.-..-|| ++...+. ...+|+.+ .|+.+.+ .+ +...++|||.+.+..-.|..
T Consensus 55 ~Gv~Gl~v----~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 55 QGINGVSP----VGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNR 130 (315)
T ss_dssp TTCSEEEC----SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEe----CccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 58999854 477776553223333 3333333 23466554 3333332 22 34578999999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 131 ~~~~~l~~~f~~va~ 145 (315)
T 3si9_A 131 PNQRGLYTHFSSIAK 145 (315)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 392
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=77.41 E-value=8.1 Score=30.65 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=47.3
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC--hhhHH----HHHHc-CCC
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG--PSTIA----EAASA-GAN 83 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~--~~ni~----~l~~~-Gad 83 (115)
..++.+++.++.. ..|-+.++.+.|++.| +...+-++.|.++++.+ ++|+.||+--- ..-.. ...+. |||
T Consensus 182 id~~~le~aI~~~-~~~~~~~Vv~t~t~~g-~g~~ddl~~Ia~ia~~~-gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD 258 (450)
T 3bc8_A 182 TDLKAVEAKIQEL-GPEHILCLHSTTACFA-PRVPDRLEELAVICANY-DIPHVVNNAYGLQSSKCMHLIQQGARVGRID 258 (450)
T ss_dssp CCHHHHHHHHHHH-CGGGEEEEEEESSCCT-TBCCCCHHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHHHHHHHSCCC
T ss_pred cCHHHHHHHHHhc-CCCCEEEEEEECCcCC-CceecCHHHHHHHHHHC-CCeEEEECCCchhhhhhHhHHHHHhcccCCC
Confidence 5678888888542 2455666667899887 22234556677776664 79999997532 22222 22344 899
Q ss_pred EEEEc
Q 033598 84 CIVAG 88 (115)
Q Consensus 84 ~iv~G 88 (115)
.++..
T Consensus 259 ~~v~S 263 (450)
T 3bc8_A 259 AFVQS 263 (450)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99864
No 393
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=77.37 E-value=17 Score=25.78 Aligned_cols=72 Identities=8% Similarity=-0.054 Sum_probs=49.9
Q ss_pred CcccchhHHHHHHHHHhh----CCCCcEEEEcCCChhhHHHHHHcCCCEEEEc-ccccCCCCHHHHHHHHHHHHHHH
Q 033598 40 GQKFMPEMMDKVRSLRNR----YPSLDIEVDGGLGPSTIAEAASAGANCIVAG-SSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 40 gq~~~~~~~~ki~~l~~~----~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G-saif~~~d~~~~~~~l~~~~~~~ 111 (115)
+..+.+.+++.|...+++ ...+...+.|.-..+.++++...|||-+++. ..-|..-++......|.+.+++.
T Consensus 14 ~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~ 90 (217)
T 3ih5_A 14 EGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEE 90 (217)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHH
T ss_pred CCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhc
Confidence 345667777777666654 3346667778655677899999999977666 44677667777777777766543
No 394
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=77.28 E-value=9.9 Score=27.72 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=52.3
Q ss_pred cCCCCH--HhHHHhHhCCCCCCEEEEEee----eCCCCCcccchhHHHHHHHH---HhhCCCCcEEEEcCCChhhHHHHH
Q 033598 8 KPGTSV--EEVYPLVEGANPVEMVLVMTV----EPGFGGQKFMPEMMDKVRSL---RNRYPSLDIEVDGGLGPSTIAEAA 78 (115)
Q Consensus 8 ~p~t~~--~~~~~~~~~~~~vD~vlvm~v----~pG~~gq~~~~~~~~ki~~l---~~~~~~~~i~~dGGI~~~ni~~l~ 78 (115)
.-.|+. +.+++++ +++.+|.+.+.+- .-|..++...+..+.-++++ .+. .+++..+-.+ +++..+.+.
T Consensus 151 ~IEt~~av~~~~eIa-~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a-aG~~~~v~~~-d~~~a~~~~ 227 (267)
T 2vws_A 151 QVESKTALDNLDEIL-DVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRA-AGKAAGFLAV-APDMAQQCL 227 (267)
T ss_dssp ECCSHHHHHTHHHHH-TSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHH-TTCEEEEECS-SHHHHHHHH
T ss_pred EECCHHHHHHHHHHh-CCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH-hCCeEEEecC-CHHHHHHHH
Confidence 334443 6778877 2357999998764 34555555555544444444 222 2566655555 889999999
Q ss_pred HcCCCEEEEccc
Q 033598 79 SAGANCIVAGSS 90 (115)
Q Consensus 79 ~~Gad~iv~Gsa 90 (115)
+.|.+.+++|+.
T Consensus 228 ~~G~~~~s~~~d 239 (267)
T 2vws_A 228 AWGANFVAVGVD 239 (267)
T ss_dssp HTTCCEEEEEEH
T ss_pred HCCCCEEEEchH
Confidence 999999999964
No 395
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=77.02 E-value=20 Score=26.47 Aligned_cols=82 Identities=12% Similarity=0.227 Sum_probs=47.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChh-h---HHHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPS-T---IAEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~-n---i~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+.+ . .+...++|||.+.+..-.|..
T Consensus 40 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 115 (297)
T 3flu_A 40 NGTDGIVAV----GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNK 115 (297)
T ss_dssp TTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEeC----ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 589988654 66666553223333 3333333 23567655 3333332 2 234568999999999877766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 116 ~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 116 PSQEGIYQHFKTIAE 130 (297)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 396
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=76.92 E-value=6.8 Score=30.19 Aligned_cols=81 Identities=12% Similarity=0.021 Sum_probs=49.8
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc---ccccCC---CCHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG---SSVFGA---PEPA 98 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G---saif~~---~d~~ 98 (115)
++|+|=+ ||.. ..+...+.++.+++..++.++.+-.--+.+.++...++|+|.+-+- |.++.. .++.
T Consensus 38 Gv~~IE~-----g~p~--~~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~ 110 (382)
T 2ztj_A 38 GIEYIEV-----TTPV--ASPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIP 110 (382)
T ss_dssp TCSEEEE-----CCTT--SCHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEEEEECC--------CCCHH
T ss_pred CcCEEEE-----cCCc--CCHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHH
Confidence 6777754 4422 3455667788888776666666655556888999999999976543 333332 2456
Q ss_pred HHHHHHHHHHHHHh
Q 033598 99 HVISLMRKSVEDAQ 112 (115)
Q Consensus 99 ~~~~~l~~~~~~~~ 112 (115)
+.++.+++.++.++
T Consensus 111 e~l~~~~~~v~~ak 124 (382)
T 2ztj_A 111 RIIEEAKEVIAYIR 124 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66666766665543
No 397
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=76.87 E-value=8 Score=29.69 Aligned_cols=71 Identities=20% Similarity=0.415 Sum_probs=48.0
Q ss_pred ecCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE---------------EcCCC
Q 033598 7 LKPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV---------------DGGLG 70 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~---------------dGGI~ 70 (115)
++|...-|.+.+...| ..++|+|+ |.||.. -++-|+++++.. ++|+.+ -|=++
T Consensus 227 mdpaN~~EAlrE~~~Di~EGAD~vM---VKPal~-------YLDIir~vk~~~-~~P~aaYqVSGEYAMikaAa~~GwiD 295 (328)
T 1w1z_A 227 MNPANTEEAMKEVELDIVEGADIVM---VKPGLA-------YLDIVWRTKERF-DVPVAIYHVSGEYAMVKAAAAKGWID 295 (328)
T ss_dssp BCTTCSHHHHHHHHHHHHHTCSEEE---EESCGG-------GHHHHHHHHHHH-CSCEEEEECHHHHHHHHHHHHTTSSC
T ss_pred CCCCCHHHHHHHHHhhHHhCCCEEE---EcCCCc-------hHHHHHHHHHhc-CCCEEEEEccHHHHHHHHHHHcCCcc
Confidence 3566666766665544 25899997 788832 455677777765 677765 34555
Q ss_pred h-----hhHHHHHHcCCCEEEEc
Q 033598 71 P-----STIAEAASAGANCIVAG 88 (115)
Q Consensus 71 ~-----~ni~~l~~~Gad~iv~G 88 (115)
. |.+-.++.+|||+|+.=
T Consensus 296 ~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 296 EDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEET
T ss_pred HHHHHHHHHHHHHhcCCCEEeee
Confidence 4 56667899999999753
No 398
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=76.76 E-value=5.1 Score=30.66 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=36.5
Q ss_pred cccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcC-CCEEEEc
Q 033598 41 QKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAG-ANCIVAG 88 (115)
Q Consensus 41 q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~G-ad~iv~G 88 (115)
|++.++.++.++++++...++||.+|+.++.+.+.++++.| +|++.+.
T Consensus 225 qP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 225 DPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp SCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 44545556667777765326999999999888998887776 8999887
No 399
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=76.62 E-value=3.5 Score=30.27 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=44.3
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEe-e--eCC-CCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMT-V--EPG-FGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCI 85 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~-v--~pG-~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~i 85 (115)
++++..+.+.+ .++|.|.+.. + ++. ++|.. ....++.++++++.. ++|+.+.+++ +.+.++.+.++|||.+
T Consensus 29 ~~~~~a~~~~~--~Ga~~i~~~e~v~~~~~~~~G~~-~~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 29 TTPEQAVIAEE--AGAVAVMALERVPADIRAQGGVA-RMSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp SSHHHHHHHHH--HTCSEEEECSSCHHHHHHTTCCC-CCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred chHHHHHHHHH--CCCcEEEeccccchHHHhhcCCc-cCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEE
Confidence 35777777762 4789987621 1 111 22211 122456677777664 6888765544 4688899999999999
No 400
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=76.55 E-value=11 Score=23.53 Aligned_cols=87 Identities=22% Similarity=0.258 Sum_probs=48.0
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEEEc
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~G 88 (115)
.+..+.++.+- .....|.|++-.--|+.. .++-++++++..++.|+.+..+- +.+......+.|++.+
T Consensus 36 ~~~~~a~~~l~-~~~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~--- 104 (154)
T 2qsj_A 36 ETVSDALAFLE-ADNTVDLILLDVNLPDAE-------AIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGF--- 104 (154)
T ss_dssp SSHHHHHHHHH-TTCCCSEEEECC-------------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBB---
T ss_pred cCHHHHHHHHh-ccCCCCEEEEeCCCCCCc-------hHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEE---
Confidence 33344444443 113578887655455533 34556777777778887766554 4567778889998865
Q ss_pred ccccCCCCHHHHHHHHHHHHH
Q 033598 89 SSVFGAPEPAHVISLMRKSVE 109 (115)
Q Consensus 89 saif~~~d~~~~~~~l~~~~~ 109 (115)
+.+.-++.+-...++..+.
T Consensus 105 --l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 105 --IPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp --CCTTSCHHHHHHHHHHHHT
T ss_pred --EeCCCCHHHHHHHHHHHHc
Confidence 4444466666666665544
No 401
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=76.26 E-value=9.6 Score=29.18 Aligned_cols=70 Identities=26% Similarity=0.380 Sum_probs=47.3
Q ss_pred cCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE---------------EcCCCh
Q 033598 8 KPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV---------------DGGLGP 71 (115)
Q Consensus 8 ~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~---------------dGGI~~ 71 (115)
+|...-|.+.+..-| ..++|+|+ |.||.. -++-|+++++.. ++|+.+ -|=++.
T Consensus 221 dpaN~~EAlre~~~Di~EGAD~vM---VKPal~-------YLDIi~~vk~~~-~~P~aaYqVSGEYAMikaAa~~GwiD~ 289 (323)
T 1l6s_A 221 NPMNRREAIRESLLDEAQGADCLM---VKPAGA-------YLDIVRELRERT-ELPIGAYQVSGEYAMIKFAALAGAIDE 289 (323)
T ss_dssp CTTCHHHHHHHHHHHHHTTCSBEE---EESCTT-------CHHHHHHHHTTC-SSCEEEEECHHHHHHHHHHHHTTSSCH
T ss_pred CCCCHHHHHHHHHhhHHhCCceEE---EecCcc-------hhHHHHHHHHhc-CCCeEEEEcCcHHHHHHHHHHcCCccH
Confidence 455555665555444 26899997 788843 355677887776 788765 344554
Q ss_pred -----hhHHHHHHcCCCEEEEc
Q 033598 72 -----STIAEAASAGANCIVAG 88 (115)
Q Consensus 72 -----~ni~~l~~~Gad~iv~G 88 (115)
|.+-.++.+|||+|+.=
T Consensus 290 ~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 290 EKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp HHHHHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHHHHHHHhcCCCEEeeh
Confidence 56667899999999753
No 402
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=75.93 E-value=22 Score=26.51 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=45.2
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcCCCEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAGANCIV 86 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~Gad~iv 86 (115)
..+..+.++.+. . ...|.|++-..-|+.+| ++-++++++..+++|+.+.-|- +.+......+.||+-++
T Consensus 35 a~~~~~al~~~~-~-~~~dlvllD~~mp~~~G-------~~~~~~lr~~~~~~pii~lt~~~~~~~~~~a~~~ga~~yl 104 (394)
T 3eq2_A 35 ALNGLQGLQIFE-S-EQPDLVICDLRMPQIDG-------LELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAADYL 104 (394)
T ss_dssp CSSHHHHHHHHH-H-SCCSEEEECCCSSSSCT-------HHHHHHHHHTTCCCCEEEC---CHHHHHHHHHHHTCSEEC
T ss_pred ECCHHHHHHHHh-h-CCCCEEEEcCCCCCCCH-------HHHHHHHHhhCCCCcEEEEEcCCCHHHHHHHHhcChhhEE
Confidence 344455555543 2 46898887666677554 4556777777788998877665 46677788899999774
No 403
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=75.92 E-value=8.4 Score=29.66 Aligned_cols=71 Identities=25% Similarity=0.434 Sum_probs=47.9
Q ss_pred ecCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE---------------Ec---
Q 033598 7 LKPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV---------------DG--- 67 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~---------------dG--- 67 (115)
++|...-|.+.+...| ..++|+|+ |.||.. -++-|+++++.. ++|+.+ -|
T Consensus 234 mdpaN~~EAlrE~~~Di~EGAD~vM---VKPal~-------YLDIir~vk~~~-~~PvaaYqVSGEYAMikaAa~~GwiD 302 (337)
T 1w5q_A 234 MDPANSDEALHEVAADLAEGADMVM---VKPGMP-------YLDIVRRVKDEF-RAPTFVYQVSGEYAMHMGAIQNGWLA 302 (337)
T ss_dssp BCTTCSHHHHHHHHHHHHTTCSEEE---EESCGG-------GHHHHHHHHHHH-CSCEEEEECHHHHHHHHHHHHTTSSC
T ss_pred CCCCChHHHHHHHHhhHHhCCCEEE---EcCCCc-------hHHHHHHHHHhc-CCCEEEEEcCcHHHHHHHHHHcCCcc
Confidence 3566666766665544 36899997 788832 445677777665 677654 23
Q ss_pred -CCChhhHHHHHHcCCCEEEEc
Q 033598 68 -GLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 68 -GI~~~ni~~l~~~Gad~iv~G 88 (115)
.+-.|.+-.++.+|||+|+.=
T Consensus 303 ~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 303 ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp TTHHHHHHHHHHHHTCSEEEET
T ss_pred HHHHHHHHHHHHhcCCCEEeee
Confidence 344567778899999999753
No 404
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=75.87 E-value=11 Score=22.78 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=50.9
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+..+.++.+- . ...|.|++-..-|+.+ .++-++++++.. +.|+. +.+.-+.+......+.||+.++.
T Consensus 34 ~~~~al~~~~-~-~~~dlii~D~~~p~~~-------g~~~~~~lr~~~-~~~ii~~t~~~~~~~~~~~~~~ga~~~l~-- 101 (120)
T 3f6p_A 34 DGNEAVEMVE-E-LQPDLILLDIMLPNKD-------GVEVCREVRKKY-DMPIIMLTAKDSEIDKVIGLEIGADDYVT-- 101 (120)
T ss_dssp SHHHHHHHHH-T-TCCSEEEEETTSTTTH-------HHHHHHHHHTTC-CSCEEEEEESSCHHHHHHHHHTTCCEEEE--
T ss_pred CHHHHHHHHh-h-CCCCEEEEeCCCCCCC-------HHHHHHHHHhcC-CCCEEEEECCCChHHHHHHHhCCcceeEc--
Confidence 3344444433 2 4689888766567644 445566776653 56654 55666677778888999998744
Q ss_pred cccCCCCHHHHHHHHHHHH
Q 033598 90 SVFGAPEPAHVISLMRKSV 108 (115)
Q Consensus 90 aif~~~d~~~~~~~l~~~~ 108 (115)
+.-++.+-...+++.+
T Consensus 102 ---KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 102 ---KPFSTRELLARVKANL 117 (120)
T ss_dssp ---ESCCHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHH
Confidence 4446655555555443
No 405
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=75.32 E-value=22 Score=26.23 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=47.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CC-CCcEEE-EcCCCh-hhH---HHHHHcCCCEEEEcccccC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YP-SLDIEV-DGGLGP-STI---AEAASAGANCIVAGSSVFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~-~~~i~~-dGGI~~-~ni---~~l~~~Gad~iv~Gsaif~ 93 (115)
.++|.+.+ -|.+|..+.-..-|| ++...+. .. .+|+.+ .|+.+. +.+ +...++|||.+.+..-.|.
T Consensus 40 ~Gv~gl~v----~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 115 (301)
T 3m5v_A 40 NGIDAVVP----VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYN 115 (301)
T ss_dssp TTCCEEEC----SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred cCCCEEEE----CccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 58898854 377776553222233 3333333 23 466554 233332 222 2456799999999988776
Q ss_pred CCCHHHHHHHHHHHHH
Q 033598 94 APEPAHVISLMRKSVE 109 (115)
Q Consensus 94 ~~d~~~~~~~l~~~~~ 109 (115)
.++.++..+.++++.+
T Consensus 116 ~~s~~~l~~~f~~va~ 131 (301)
T 3m5v_A 116 KPTQQGLYEHYKAIAQ 131 (301)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6776666666665544
No 406
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=75.27 E-value=8.4 Score=28.20 Aligned_cols=70 Identities=24% Similarity=0.400 Sum_probs=46.8
Q ss_pred EEEeeeC----CCCCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCC
Q 033598 30 LVMTVEP----GFGGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGA 94 (115)
Q Consensus 30 lvm~v~p----G~~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~ 94 (115)
++++-+| | +|..-.++..+.+. .+|+ .+ .+++|.-=|+++++|+.+|. +-.+|++-+|++=++
T Consensus 156 ~vIAYEPvWAIG-TG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~- 233 (244)
T 2v5b_A 156 VVIAYEPVWAIG-TGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK- 233 (244)
T ss_dssp EEEEECCHHHHS-SSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS-
T ss_pred EEEEECCHHHhC-CCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH-
Confidence 3457788 5 45555444444332 2232 11 24889999999999999874 567999999998777
Q ss_pred CCHHHHH
Q 033598 95 PEPAHVI 101 (115)
Q Consensus 95 ~d~~~~~ 101 (115)
++..+-+
T Consensus 234 ~~F~~Ii 240 (244)
T 2v5b_A 234 PEFVEII 240 (244)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 7765443
No 407
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=75.14 E-value=8.3 Score=29.47 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=53.7
Q ss_pred CCCHHhHHHhHhCCCCCCEEEE--EeeeCCCC--CcccchhHHHHHHHHHhhCCCCcEEEEc------------------
Q 033598 10 GTSVEEVYPLVEGANPVEMVLV--MTVEPGFG--GQKFMPEMMDKVRSLRNRYPSLDIEVDG------------------ 67 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~--gq~~~~~~~~ki~~l~~~~~~~~i~~dG------------------ 67 (115)
-|..+...++++. -++|.+=+ .++|--|. |.+...-.+++|+++++.. ++|++.=|
T Consensus 152 yTdPeea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~-~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 152 LTEPQDAKKFVEL-TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT-GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH-CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHH-HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh-CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 3777888888744 47886532 12333333 3221002245666666654 69999999
Q ss_pred -----CCChhhHHHHHHcCCCEEEEcccc
Q 033598 68 -----GLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 68 -----GI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
|+..+.++...+.|+.-+=+.+.+
T Consensus 230 ~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl 258 (323)
T 2isw_A 230 MPDAVGVPIESIVHAIGEGVCKINVDSDS 258 (323)
T ss_dssp CTTCBCCCHHHHHHHHHTTEEEEEECHHH
T ss_pred cccCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 999999999999999999998765
No 408
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=75.11 E-value=27 Score=27.18 Aligned_cols=88 Identities=13% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhH-HHHHHHHHhh---CCCCcEEEEcCCChhhHHHH-HHcCCCEEEE-cccccCCC-C
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEM-MDKVRSLRNR---YPSLDIEVDGGLGPSTIAEA-ASAGANCIVA-GSSVFGAP-E 96 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~-~~ki~~l~~~---~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~-Gsaif~~~-d 96 (115)
.++|.+.+-++. | .-.+.++. .+....+++- .+.+-=++.||++...++++ ...|-|++.. |..++..+ .
T Consensus 276 aG~D~ih~gt~~-G--k~~~~~~~~~~~~~~~~q~w~~~~~~~PV~SGGih~~~~p~l~~~~G~Dvvl~~GGG~~gHP~G 352 (378)
T 3qfw_A 276 FGADATVFPNYG-G--RFAYSTASCLALAQAARDPFGKLNACIPTPAGGIMLQRVNELLRFYGQDVMLLIGGSLLASRER 352 (378)
T ss_dssp HTCSEEEEECCC-----CCCCHHHHHHHHHHHHSCCTTCCCCEEEEESSCCGGGHHHHHHHHCSSCEEEC---------C
T ss_pred hCCCcceeCCcc-C--CcCCCHHHHHHHHHHhcCcccCCCCeEEeecCCCCHHHHHHHHHHhCCcEEEecCccccCCCCC
Confidence 589999765442 1 11222222 2222222221 13444678999999999985 7789998766 56788764 6
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 033598 97 PAHVISLMRKSVEDAQKN 114 (115)
Q Consensus 97 ~~~~~~~l~~~~~~~~~~ 114 (115)
+++-++.+|+.++.+.++
T Consensus 353 ~~aGa~a~rqA~ea~~~~ 370 (378)
T 3qfw_A 353 LTEQASRFVNKVADYGQR 370 (378)
T ss_dssp HHHHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 899999999998875543
No 409
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=74.97 E-value=12 Score=22.98 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=44.6
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-.--|+.. .++-++++++.. +++|+.+. +.-+.+......+.|++.++. +.-++.+-.
T Consensus 59 ~~dlii~D~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~L~ 126 (143)
T 2qvg_A 59 HPKLILLDINIPKMN-------GIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLI-----KPLDYGEAI 126 (143)
T ss_dssp CCSEEEEETTCTTSC-------HHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEE-----SSCCHHHHH
T ss_pred CCCEEEEecCCCCCC-------HHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEE-----CCCCHHHHH
Confidence 578888655455533 455677777654 67776654 445677888888999998743 334555554
Q ss_pred HHHHH
Q 033598 102 SLMRK 106 (115)
Q Consensus 102 ~~l~~ 106 (115)
..+..
T Consensus 127 ~~~~~ 131 (143)
T 2qvg_A 127 KLFWI 131 (143)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 410
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=74.44 E-value=1 Score=27.21 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=44.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+..| ++.++++++..++.|+.+..+ -+.+......+.|++.+ +.+.-++.+-..
T Consensus 46 ~~~dlvi~d~~~~~~~g-------~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~-----l~kp~~~~~l~~ 113 (124)
T 1dc7_A 46 KTPDVLLSDIRMPGMDG-------LALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDY-----LPKPFDIDEAVA 113 (124)
T ss_dssp CCCSCEEECSCSSHHHH-------CSTHHHHHHHCTTSCCCCBCCSTTSTTTTSSCTTCCCCC-----BCSSCCHHHHHH
T ss_pred CCCCEEEEeeecCCCCH-------HHHHHHHHhhCCCCCEEEEecCCCHHHHHHHHhcCcceE-----eeCCCCHHHHHH
Confidence 35787765444454333 223555666666777665544 34556666677887754 445557777666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..++.
T Consensus 114 ~i~~~~~~ 121 (124)
T 1dc7_A 114 LVERAISH 121 (124)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 67666543
No 411
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=74.20 E-value=12 Score=25.48 Aligned_cols=67 Identities=19% Similarity=0.170 Sum_probs=39.5
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
+.+.++.+++ .++|+|.+- .|..+... .....++++++... .++++.+. +.+..+.++|+|++.+++
T Consensus 28 ~~~~~~~~~~--~G~~~i~l~--~~~~~~~~-~~~~~~~l~~~~~~-~~v~v~v~-----~~~~~a~~~gad~v~l~~ 94 (215)
T 1xi3_A 28 EVESVREALE--GGATAIQMR--IKNAPTRE-MYEIGKTLRQLTRE-YDALFFVD-----DRVDVALAVDADGVQLGP 94 (215)
T ss_dssp HHHHHHHHHH--TTCSEEEEC--CCSCCHHH-HHHHHHHHHHHHHH-TTCEEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHH--CCCCEEEEC--CCCCCHHH-HHHHHHHHHHHHHH-cCCeEEEc-----ChHHHHHHcCCCEEEECC
Confidence 3466666662 579999753 34322111 12233334333332 25777774 677889999999998874
No 412
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=74.18 E-value=15 Score=27.56 Aligned_cols=78 Identities=18% Similarity=0.242 Sum_probs=55.3
Q ss_pred CCCHHhHHHhHhCCCCCCEEEE--EeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc--CCChhhHHHHHHcCCCEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLV--MTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG--GLGPSTIAEAASAGANCI 85 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG--GI~~~ni~~l~~~Gad~i 85 (115)
.|..+...++++. -++|.+=+ .++|--|.|.+ .-.+++|+++++.. ++|++.=| |+..+.++...+.|+.-+
T Consensus 158 yT~Peea~~Fv~~-TgvD~LAvaiGt~HG~Y~~~p--~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 233 (288)
T 3q94_A 158 YADPAECKHLVEA-TGIDCLAPALGSVHGPYKGEP--NLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLGTSKI 233 (288)
T ss_dssp CCCHHHHHHHHHH-HCCSEEEECSSCBSSCCSSSC--CCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHHH-HCCCEEEEEcCcccCCcCCCC--ccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcCCeEE
Confidence 4777777888743 47897643 34444455443 23456667776654 58888887 688999999999999999
Q ss_pred EEcccc
Q 033598 86 VAGSSV 91 (115)
Q Consensus 86 v~Gsai 91 (115)
=+++.+
T Consensus 234 Ni~Tdl 239 (288)
T 3q94_A 234 NVNTEN 239 (288)
T ss_dssp EECHHH
T ss_pred EEChHH
Confidence 998765
No 413
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=74.05 E-value=23 Score=25.83 Aligned_cols=86 Identities=16% Similarity=0.070 Sum_probs=55.0
Q ss_pred CCCCEEEEEee-eCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc---ccccC----CC
Q 033598 24 NPVEMVLVMTV-EPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG---SSVFG----AP 95 (115)
Q Consensus 24 ~~vD~vlvm~v-~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G---saif~----~~ 95 (115)
.++|+|-+.+- .|-|-.|. .+..+.++.+++. ++.++.+-. -+.+.+....++|++.+-+. |..+. ..
T Consensus 38 ~Gv~~IE~g~~~~~~~~p~~--~~~~e~~~~i~~~-~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~ 113 (295)
T 1ydn_A 38 CGYARIEATSFVSPKWVPQL--ADSREVMAGIRRA-DGVRYSVLV-PNMKGYEAAAAAHADEIAVFISASEGFSKANINC 113 (295)
T ss_dssp TTCSEEEEEECSCTTTCGGG--TTHHHHHHHSCCC-SSSEEEEEC-SSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSS
T ss_pred cCcCEEEEccCcCccccccc--cCHHHHHHHHHhC-CCCEEEEEe-CCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCC
Confidence 47899887531 12222221 2566677777654 578887765 78999999999999976554 22221 24
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 033598 96 EPAHVISLMRKSVEDAQK 113 (115)
Q Consensus 96 d~~~~~~~l~~~~~~~~~ 113 (115)
+..+.++.+++.++.+++
T Consensus 114 ~~~e~~~~~~~~v~~a~~ 131 (295)
T 1ydn_A 114 TIAESIERLSPVIGAAIN 131 (295)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 677788887777765443
No 414
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=73.55 E-value=21 Score=25.02 Aligned_cols=106 Identities=7% Similarity=0.095 Sum_probs=57.0
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCC-CCCcccchhHHHHHHHHHhhCCCCc---EEEEcC--C-----
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPG-FGGQKFMPEMMDKVRSLRNRYPSLD---IEVDGG--L----- 69 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG-~~gq~~~~~~~~ki~~l~~~~~~~~---i~~dGG--I----- 69 (115)
||.|.-+....+++..-+.+.+ .++|.|-+..-.|. +....+.+...++++++.+.. ++. +.+-+. +
T Consensus 2 m~~G~~~~~~~~l~~~l~~~~~-~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~~l~~~ 79 (285)
T 1qtw_A 2 KYIGAHVSAAGGLANAAIRAAE-IDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKY-HYTSAQILPHDSYLINLGHP 79 (285)
T ss_dssp CEEEEECCCTTCHHHHHHHHHH-TTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHT-TCCGGGBCCBCCTTCCTTCS
T ss_pred CceeEEeccccCHHHHHHHHHH-cCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHc-CCCceeEEecCCcccccCCC
Confidence 5788888877777655555543 58999987433332 221223345556666554432 343 333221 1
Q ss_pred Ch-----------hhHHHHHHcCCCEEEEcccccCCC-CHHHHHHHHHHHH
Q 033598 70 GP-----------STIAEAASAGANCIVAGSSVFGAP-EPAHVISLMRKSV 108 (115)
Q Consensus 70 ~~-----------~ni~~l~~~Gad~iv~Gsaif~~~-d~~~~~~~l~~~~ 108 (115)
++ ..+....+.|+..+++.+.-.... +..+..+++.+.+
T Consensus 80 ~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l 130 (285)
T 1qtw_A 80 VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESI 130 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHH
Confidence 11 124556789999998865533322 4444444444333
No 415
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=73.40 E-value=14 Score=27.61 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=46.5
Q ss_pred HHhHHHhHhCCCCCCEEEEEe--eeCCCCCccc---chhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 13 VEEVYPLVEGANPVEMVLVMT--VEPGFGGQKF---MPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~---~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
++..+.+++ .++|+|=|.+ ..||...-.- ......-|+.+++. ++||++|=- +++.++..+++|++++--
T Consensus 49 ~~~a~~~v~--~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT~-~~~Va~aAl~aGa~iINd 123 (294)
T 2y5s_A 49 LRRAERMIA--EGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTY-KPAVMRAALAAGADLIND 123 (294)
T ss_dssp HHHHHHHHH--TTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEECC-CHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEECC-CHHHHHHHHHcCCCEEEE
Confidence 344445552 6899998764 3466433221 22233334445443 789999865 788888888889888877
Q ss_pred cccc
Q 033598 88 GSSV 91 (115)
Q Consensus 88 Gsai 91 (115)
.|+.
T Consensus 124 Vsg~ 127 (294)
T 2y5s_A 124 IWGF 127 (294)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 6653
No 416
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=73.36 E-value=11 Score=25.99 Aligned_cols=68 Identities=15% Similarity=0.103 Sum_probs=40.2
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccc--hhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFM--PEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~--~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.++.++.+++ .++|+|.+- .+..+...+. ....+.++++.+. .++++.+. +.+..+.++|+|++.+|.
T Consensus 33 ~~~~~~~~~~--~G~~~i~l~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~v~v~v~-----~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 33 PVTVVQKALK--GGATLYQFR--EKGGDALTGEARIKFAEKAQAACRE-AGVPFIVN-----DDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHH--HTCSEEEEC--CCSTTCCCHHHHHHHHHHHHHHHHH-HTCCEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHH--CCCCEEEEe--cCCCCHhHHHHHHHHHHHHHHHHHH-cCCeEEEc-----CHHHHHHHcCCCEEEECC
Confidence 3455666652 489999764 2322222221 2334444444332 25777775 677888999999999875
No 417
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=72.93 E-value=21 Score=24.95 Aligned_cols=108 Identities=7% Similarity=0.066 Sum_probs=60.0
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCC-CCCcccchhHHHHHHHHHhhCCCCc---EEEEcC--CCh---
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPG-FGGQKFMPEMMDKVRSLRNRYPSLD---IEVDGG--LGP--- 71 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG-~~gq~~~~~~~~ki~~l~~~~~~~~---i~~dGG--I~~--- 71 (115)
++.|+-++...+++..-+.+.+ .++|.|-+..-.|. +....+.+...++++++.+.. ++. +.+-+. ++.
T Consensus 2 ~~~G~~~~~~~~~~~~l~~~~~-~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~h~~~~~~~~~~ 79 (287)
T 2x7v_A 2 IKIGAHMPISKGFDRVPQDTVN-IGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKH-GIDWENAFCHSGYLINLASP 79 (287)
T ss_dssp CCEEEECCCTTCGGGHHHHHHH-TTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHH-TCCGGGEEEECCTTCCTTCS
T ss_pred CceeeeeccccCHHHHHHHHHH-cCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHc-CCCcceeEEecccccccCCC
Confidence 4688888877667655555533 58999988543342 222233345555665554332 344 444332 221
Q ss_pred -------------hhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHH
Q 033598 72 -------------STIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 72 -------------~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~ 110 (115)
+.+....+.|+..+++.+.-....+..+..+++.+.+++
T Consensus 80 ~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~ 131 (287)
T 2x7v_A 80 KDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNE 131 (287)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHH
Confidence 134455678999998865544334555555555555543
No 418
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.67 E-value=20 Score=25.62 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=48.2
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC-hh-hHHHHHHcCCCEEEEcccc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PS-TIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~-ni~~l~~~Gad~iv~Gsai 91 (115)
+.++.+- .++||+-+--..-.|-- -......-++++|+.. +.++-++==+. ++ -++.+.++|||++.+-..-
T Consensus 17 ~~i~~~~---~gad~lHvDvmDG~fvp--n~t~G~~~v~~lr~~~-~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea 90 (231)
T 3ctl_A 17 EQIEFID---SHADYFHIDIMDGHFVP--NLTLSPFFVSQVKKLA-TKPLDCHLMVTRPQDYIAQLARAGADFITLHPET 90 (231)
T ss_dssp HHHHHHH---TTCSCEEEEEECSSSSS--CCCBCHHHHHHHHTTC-CSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGG
T ss_pred HHHHHHH---cCCCEEEEEEEeCccCc--cchhcHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEECccc
Confidence 4455543 67898655444433321 1222444567777653 44444443332 33 3788999999999877443
Q ss_pred cCCCCHHHHHHHHHH
Q 033598 92 FGAPEPAHVISLMRK 106 (115)
Q Consensus 92 f~~~d~~~~~~~l~~ 106 (115)
+ .+++.+.++.+++
T Consensus 91 ~-~~~~~~~i~~i~~ 104 (231)
T 3ctl_A 91 I-NGQAFRLIDEIRR 104 (231)
T ss_dssp C-TTTHHHHHHHHHH
T ss_pred C-CccHHHHHHHHHH
Confidence 1 2456666666654
No 419
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=72.44 E-value=27 Score=25.87 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=39.5
Q ss_pred CCCCEEEEEe--eeCCCCCc---ccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccc
Q 033598 24 NPVEMVLVMT--VEPGFGGQ---KFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 24 ~~vD~vlvm~--v~pG~~gq---~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++|+|=|.+ ..||.... .-......-++.+++. ++||++|=- +++.++..+++|++++--.|+.
T Consensus 41 ~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~-~~~va~aAl~aGa~iINdvsg~ 110 (280)
T 1eye_A 41 AGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTM-RADVARAALQNGAQMVNDVSGG 110 (280)
T ss_dssp TTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECS-CHHHHHHHHHTTCCEEEETTTT
T ss_pred CCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 6899988875 34664332 2223334445555543 789999865 7888888888888888777764
No 420
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=72.12 E-value=22 Score=24.78 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=45.5
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+..-++..+.+++ .+++.|.+= +. .+...+.++++++ +++.+.+.-=++.+.++...++|||+++++
T Consensus 24 ~~~~~~~~~~l~~--gGv~~iel~-----~k----~~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 24 GEDLLGLARVLEE--EGVGALEIT-----LR----TEKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp CCCHHHHHHHHHH--TTCCEEEEE-----CS----STHHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHH--cCCCEEEEe-----CC----ChHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCCEEEcC
Confidence 3334556666662 479988763 11 2345667777777 566666655556788888999999999877
Q ss_pred c
Q 033598 89 S 89 (115)
Q Consensus 89 s 89 (115)
.
T Consensus 91 ~ 91 (207)
T 2yw3_A 91 G 91 (207)
T ss_dssp S
T ss_pred C
Confidence 3
No 421
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=72.06 E-value=16 Score=30.01 Aligned_cols=76 Identities=9% Similarity=0.144 Sum_probs=47.1
Q ss_pred EecCCCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc-----
Q 033598 6 ALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA----- 80 (115)
Q Consensus 6 al~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~----- 80 (115)
-|.+.+|.+.+...+.. ..+|.|++-+..+. -.+.+.+-++++++..++++|.+=|......... .+.
T Consensus 131 ~LG~~vP~e~iv~aa~~-~~~diVgLS~l~t~-----~~~~m~~~i~~Lr~~g~~i~ViVGGa~~~~~~a~-~~i~p~~~ 203 (579)
T 3bul_A 131 DLGVMVPAEKILRTAKE-VNADLIGLSGLITP-----SLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTA-VKIEQNYS 203 (579)
T ss_dssp ECCSSBCHHHHHHHHHH-HTCSEEEEECCSTH-----HHHHHHHHHHHHHHTTCCSCEEEESTTCCHHHHH-HHTGGGCS
T ss_pred ECCCCCCHHHHHHHHHH-cCCCEEEEEecCCC-----CHHHHHHHHHHHHHcCCCCeEEEEccccchhhhh-hhhhhccc
Confidence 46788899887777643 58999987544322 1234445567777776789887766644443321 122
Q ss_pred CCCEEEEc
Q 033598 81 GANCIVAG 88 (115)
Q Consensus 81 Gad~iv~G 88 (115)
|||+.+-.
T Consensus 204 GAD~ya~D 211 (579)
T 3bul_A 204 GPTVYVQN 211 (579)
T ss_dssp SCEEECCS
T ss_pred CCeEEECC
Confidence 88877544
No 422
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=72.02 E-value=28 Score=25.83 Aligned_cols=66 Identities=24% Similarity=0.317 Sum_probs=43.7
Q ss_pred CCCCEEEEEe--eeCCCCCcccc---hhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccc
Q 033598 24 NPVEMVLVMT--VEPGFGGQKFM---PEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 24 ~~vD~vlvm~--v~pG~~gq~~~---~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++|+|=|.+ ..||..-.... .....-++.+++.. ++||++|=- +++.++..+++|++++--.|+.
T Consensus 50 ~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~-~~~va~aAl~aGa~iINdvsg~ 120 (282)
T 1aj0_A 50 AGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTS-KPEVIRESAKVGAHIINDIRSL 120 (282)
T ss_dssp HTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECC-CHHHHHHHHHTTCCEEEETTTT
T ss_pred CCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 5899998875 45774432221 12223344444443 789999875 7888888888899888877765
No 423
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=72.01 E-value=21 Score=24.98 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=48.5
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEE--EEcCCChhhHHHHHHcCCCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIE--VDGGLGPSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~--~dGGI~~~ni~~l~~~Gad~iv~Gsa 90 (115)
.+.++.+.+ .++|++.+--.+-.|--. . ....+.++++++.. +.++. .---=..+.+..+.++|+|++.+-..
T Consensus 22 ~~~i~~~~~--~Gad~i~l~i~Dg~fv~~-~-~~~~~~~~~lr~~~-~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVR--LGADWLHMDIMDGHFVPN-L-TIGAPVIQSLRKHT-KAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHH--TTCSEEEEEEEBSSSSSC-B-CBCHHHHHHHHTTC-CSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHH--cCCCEEEEEEecCCcCcc-h-hhCHHHHHHHHhhc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEECCC
Confidence 345555541 479998877655322211 1 22345677777654 33333 22221233588899999999977644
Q ss_pred ccCCCCH-HHHHHHHHH
Q 033598 91 VFGAPEP-AHVISLMRK 106 (115)
Q Consensus 91 if~~~d~-~~~~~~l~~ 106 (115)
- .+.+ .+.++.+++
T Consensus 97 ~--~~~~~~~~~~~i~~ 111 (228)
T 1h1y_A 97 V--SRDNWQELIQSIKA 111 (228)
T ss_dssp G--CTTTHHHHHHHHHH
T ss_pred C--cccHHHHHHHHHHH
Confidence 2 2344 556666553
No 424
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=71.97 E-value=14 Score=22.38 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=38.0
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh-CCCCcEEE-EcCCChhhHHHHHHcCCCEEEEc
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR-YPSLDIEV-DGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~-~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
..|.+++-..-|+.+| ++.++++++. .+..|+.+ .+.-+.+......+.|++.++.=
T Consensus 48 ~~dlvllD~~l~~~~g-------~~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~K 106 (130)
T 1dz3_A 48 RPDILLLDIIMPHLDG-------LAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILK 106 (130)
T ss_dssp CCSEEEEESCCSSSCH-------HHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEecCCCCCCH-------HHHHHHHHhcCCCCCcEEEEecCCCHHHHHHHHHcCCCEEEeC
Confidence 5788887665666443 4456666664 45666654 44456777888899999987543
No 425
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=71.84 E-value=27 Score=25.65 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=48.0
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCCh-hhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGP-STI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~-~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+. +.+ +...++|||.+.+..-.|..
T Consensus 35 ~Gv~gl~v~----GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 35 NNAQAIIVN----GTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK 110 (292)
T ss_dssp TTCCEEEES----SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cCCCEEEEC----ccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 589998654 66666553222233 3333333 33567655 233333 333 24567899999999877766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++..+..+.++++.+
T Consensus 111 ~~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 111 TNQRGLVKHFEAIAD 125 (292)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 426
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=71.83 E-value=13 Score=22.16 Aligned_cols=74 Identities=11% Similarity=0.176 Sum_probs=46.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEEcCC-ChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVDGGL-GPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~dGGI-~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
...|.+++-..-|+.. .++.++++++.. ++.|+.+..+- +.+......+.|++.++. +.-++.+-
T Consensus 45 ~~~dlvi~D~~l~~~~-------g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l 112 (127)
T 2jba_A 45 PWPDLILLAWMLPGGS-------GIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDCIT-----KPFSPKEL 112 (127)
T ss_dssp SCCSEEEEESEETTEE-------HHHHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSEEEE-----ESCCHHHH
T ss_pred cCCCEEEEecCCCCCC-------HHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCeEEe-----CCCCHHHH
Confidence 3578887766667643 345577777654 67887766554 455666777889987744 33456665
Q ss_pred HHHHHHHHH
Q 033598 101 ISLMRKSVE 109 (115)
Q Consensus 101 ~~~l~~~~~ 109 (115)
...++..++
T Consensus 113 ~~~i~~~~~ 121 (127)
T 2jba_A 113 VARIKAVMR 121 (127)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555655544
No 427
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=71.82 E-value=24 Score=26.64 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=55.2
Q ss_pred CCCHHhHHHhHhCCCCCCEEEE--EeeeCCCC--CcccchhHHHHHHHHHhhCCCCcEEEEc------------------
Q 033598 10 GTSVEEVYPLVEGANPVEMVLV--MTVEPGFG--GQKFMPEMMDKVRSLRNRYPSLDIEVDG------------------ 67 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlv--m~v~pG~~--gq~~~~~~~~ki~~l~~~~~~~~i~~dG------------------ 67 (115)
-|..+...++++. -++|.+=+ .++|--|. |.+ .-.+++|+++++.. ++|++.=|
T Consensus 152 yT~Peea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~g~p--~L~~~~L~~I~~~~-~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 152 LTNPEEARIFMER-TGADYLAVAIGTSHGAYKGKGRP--FIDHARLERIARLV-PAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp CCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCSSSSC--CCCHHHHHHHHHHC-CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHH-HCCCEEEEecCccccccCCCCCC--ccCHHHHHHHHHhc-CCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 3778888888844 47886632 22333343 332 23456777777765 49999999
Q ss_pred -----CCChhhHHHHHHcCCCEEEEcccc
Q 033598 68 -----GLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 68 -----GI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
|+..+.++...+.|+.-+=+.+.+
T Consensus 228 ~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl 256 (305)
T 1rvg_A 228 IGEAAGIHPEDIKKAISLGIAKINTDTDL 256 (305)
T ss_dssp CCSCBCCCHHHHHHHHHTTEEEEEECHHH
T ss_pred cccCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 779999999999999999888765
No 428
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=71.47 E-value=17 Score=27.05 Aligned_cols=79 Identities=14% Similarity=0.152 Sum_probs=50.3
Q ss_pred HhHHHhHhCCCCCCEEEEEe--eeCCCCCcccchhHHHH----HHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 14 EEVYPLVEGANPVEMVLVMT--VEPGFGGQKFMPEMMDK----VRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~~~~~~~k----i~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
+..+.+++ .++|+|=|.+ ..||...-... +-++| |+.+++ ++++|.+|== +++.++..+++|||++-=
T Consensus 34 ~~a~~m~~--~GAdiIDIGgeSTRPga~~vs~e-eE~~Rv~pvi~~l~~--~~v~iSIDT~-~~~Va~~al~aGa~iIND 107 (270)
T 4hb7_A 34 NRVKAMID--EGADIIDVGGVSTRPGHEMVTLE-EELNRVLPVVEAIVG--FDVKISVDTF-RSEVAEACLKLGVDMIND 107 (270)
T ss_dssp HHHHHHHH--TTCSEEEEESCCCSTTCCCCCHH-HHHHHHHHHHHHHTT--SSSEEEEECS-CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH--CCCCEEEECCccCCCCCCCCchH-HHHHHHHHHHHHhhc--CCCeEEEECC-CHHHHHHHHHhccceecc
Confidence 44455552 5888887764 57875533322 22233 333332 4799999964 889999999999998877
Q ss_pred cccccCCCCHH
Q 033598 88 GSSVFGAPEPA 98 (115)
Q Consensus 88 Gsaif~~~d~~ 98 (115)
.|+.+..++..
T Consensus 108 Vs~g~~d~~m~ 118 (270)
T 4hb7_A 108 QWAGLYDHRMF 118 (270)
T ss_dssp TTTTSSCTHHH
T ss_pred ccccccchhHH
Confidence 67665544433
No 429
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=71.11 E-value=16 Score=22.58 Aligned_cols=74 Identities=9% Similarity=0.046 Sum_probs=48.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.|++-..-|+.. .++-++++++.. +.|+.+. +.-+.+......+.|++.++ .+.-++.+-..
T Consensus 47 ~~~dlvllD~~l~~~~-------g~~l~~~l~~~~-~~~ii~ls~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L~~ 113 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGD-------GWTLCKKIRNVT-TCPIVYMTYINEDQSILNALNSGGDDYL-----IKPLNLEILYA 113 (136)
T ss_dssp CCCSEEEEESEETTEE-------HHHHHHHHHTTC-CCCEEEEESCCCHHHHHHHHHTTCCEEE-----ESSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCC-------HHHHHHHHccCC-CCCEEEEEcCCCHHHHHHHHHcCCcEEE-----ECCCCHHHHHH
Confidence 4679888766667644 345567777654 6776654 45567778888999999874 34446666666
Q ss_pred HHHHHHHH
Q 033598 103 LMRKSVED 110 (115)
Q Consensus 103 ~l~~~~~~ 110 (115)
.++..+..
T Consensus 114 ~l~~~~~~ 121 (136)
T 2qzj_A 114 KVKAILRR 121 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 430
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=70.89 E-value=23 Score=25.14 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=50.7
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCC-CcccchhHHHHHHHHHhhC-CCCcEEEEcCCC--hhhHHHHHHcCCCEEEEcc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFG-GQKFMPEMMDKVRSLRNRY-PSLDIEVDGGLG--PSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~-gq~~~~~~~~ki~~l~~~~-~~~~i~~dGGI~--~~ni~~l~~~Gad~iv~Gs 89 (115)
+.++.+. . .++||+-+--.+-.|- .-.|.+. -++++|+.. ++.++-+.=-++ .+-++.+.++|||.+.+..
T Consensus 21 ~~i~~l~-~-~g~d~~h~DVmDg~Fvpn~~~G~~---~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRML-D-SGADYLHLDVMDGHFVPNITFGHP---VVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHH-H-TTCSCEEEEEEBSSSSSCBCBCHH---HHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHH-H-cCCCEEEEEecCCCcCcccccCHH---HHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEcc
Confidence 4444444 1 4689888765554442 1234444 456666653 555555433333 2457889999999998874
Q ss_pred cccCCCCHHHHHHHHHH
Q 033598 90 SVFGAPEPAHVISLMRK 106 (115)
Q Consensus 90 aif~~~d~~~~~~~l~~ 106 (115)
.- .+++.+.++.+++
T Consensus 96 Ea--~~~~~~~i~~i~~ 110 (228)
T 3ovp_A 96 EA--TENPGALIKDIRE 110 (228)
T ss_dssp GG--CSCHHHHHHHHHH
T ss_pred CC--chhHHHHHHHHHH
Confidence 32 2466677776664
No 431
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=70.82 E-value=27 Score=25.34 Aligned_cols=78 Identities=8% Similarity=0.155 Sum_probs=52.5
Q ss_pred EEecCCC--CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCC
Q 033598 5 VALKPGT--SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGA 82 (115)
Q Consensus 5 lal~p~t--~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Ga 82 (115)
..+.|+- +.+.++.+.+ .+.|.|+|.. ..| -.....++.++++|+ .++|+..--+ +.+.+ ..|+
T Consensus 16 ~~~DPdk~~~~~~l~~~~~--~GtDaI~vGg----s~g-vt~~~~~~~v~~ik~--~~~Piil~p~-~~~~~----~~ga 81 (235)
T 3w01_A 16 FKLDPAKHISDDDLDAICM--SQTDAIMIGG----TDD-VTEDNVIHLMSKIRR--YPLPLVLEIS-NIESV----MPGF 81 (235)
T ss_dssp EEECTTSCCCHHHHHHHHT--SSCSEEEECC----SSC-CCHHHHHHHHHHHTT--SCSCEEEECC-CSTTC----CTTC
T ss_pred EeECCCCcCCHHHHHHHHH--cCCCEEEECC----cCC-cCHHHHHHHHHHhcC--cCCCEEEecC-CHHHh----hcCC
Confidence 4567754 5677777662 5899998853 222 234567777888887 4789887777 55554 4599
Q ss_pred CEEEEcccccCCCCH
Q 033598 83 NCIVAGSSVFGAPEP 97 (115)
Q Consensus 83 d~iv~Gsaif~~~d~ 97 (115)
|.+.+=|-+.+ +|+
T Consensus 82 D~il~pslln~-~~~ 95 (235)
T 3w01_A 82 DFYFVPTVLNS-TDV 95 (235)
T ss_dssp SEEEEEEETTB-SSG
T ss_pred CEEEEccccCC-CCc
Confidence 99988876654 443
No 432
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=70.82 E-value=8 Score=30.26 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=35.7
Q ss_pred hHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 15 EVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 15 ~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
.+++.+ ...|+|+ +-+.-++.|...-.....+.++.+.+ ++|+.+..|--.+....+.+.|.+.+..
T Consensus 280 ~l~~~l---~~ADLVI--TGEG~~D~Qtl~GK~p~gVa~~A~~~-~vPviaiaG~~~~~~~~~~~~Gi~a~f~ 346 (383)
T 3cwc_A 280 HLEACL---ADADLVI--TGEGRIDSQTIHGKVPIGVANIAKRY-NKPVIGIAGSLTADVSVVHEHGLDAVFS 346 (383)
T ss_dssp THHHHH---HHCSEEE--ECCEESCC----CHHHHHHHHHHHHT-TCCEEEEEEECC--------CCCSEEEE
T ss_pred ChHhhh---cCCCEEE--ECCCCCcCcCCCCcHHHHHHHHHHHh-CCCEEEEeCCCCCChHHHHhcCCcEEEE
Confidence 456667 6688765 55666788887666666667666554 6776655554456677888889887644
No 433
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=69.88 E-value=14 Score=27.49 Aligned_cols=68 Identities=19% Similarity=0.245 Sum_probs=45.2
Q ss_pred EEeeeCCC---CCcccchhHHHHHH-HHHhh-----CCCCcEEEEcCCChhhHHHHHH-cCCCEEEEcccccCCCCHH
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKVR-SLRNR-----YPSLDIEVDGGLGPSTIAEAAS-AGANCIVAGSSVFGAPEPA 98 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki~-~l~~~-----~~~~~i~~dGGI~~~ni~~l~~-~Gad~iv~Gsaif~~~d~~ 98 (115)
+++=+|-. +|..-.++..+.+. .+|+. ...++|.==|+++++|+.+|.. ..+|++.+|++=++.++..
T Consensus 188 VIAYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgASL~~~~F~ 265 (272)
T 4g1k_A 188 VVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLKSGDFL 265 (272)
T ss_dssp EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHH
T ss_pred EEEECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHH
Confidence 44667722 45555544444422 33332 2368899999999999999865 5899999998877654443
No 434
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=69.28 E-value=2 Score=35.06 Aligned_cols=48 Identities=13% Similarity=0.222 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHhhCCCCcEEEEc------CC-------ChhhHHHHHHcCCCEEEEcccc
Q 033598 44 MPEMMDKVRSLRNRYPSLDIEVDG------GL-------GPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 44 ~~~~~~ki~~l~~~~~~~~i~~dG------GI-------~~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++..+.++++++..++.++.+-+ |. ...++..+.++|+|+|-+-.+.
T Consensus 80 ~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~ 140 (539)
T 1rqb_A 80 NEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAM 140 (539)
T ss_dssp CCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEeh
Confidence 456788889888877788888766 43 3556788999999998765444
No 435
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=69.26 E-value=16 Score=26.90 Aligned_cols=73 Identities=10% Similarity=-0.030 Sum_probs=51.1
Q ss_pred CCHHhHHHhHh---CCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE----EcCCChhhHHHHHHcCCC
Q 033598 11 TSVEEVYPLVE---GANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV----DGGLGPSTIAEAASAGAN 83 (115)
Q Consensus 11 t~~~~~~~~~~---~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~----dGGI~~~ni~~l~~~Gad 83 (115)
|+.+.+.++++ + .++|.|-+-- ..|........+.++++++..+++|+.+ |-|+...|.-...++|++
T Consensus 156 ~~~~~~~~~~~~~~~-~G~d~i~l~D----T~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 156 VDPRQVAWVARELQQ-MGCYEVSLGD----TIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp CCHHHHHHHHHHHHH-TTCSEEEEEE----SSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHH-cCCCEEEEeC----CCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 66666666664 3 4789886542 2233334456777888888776667665 679999999999999999
Q ss_pred EEEEc
Q 033598 84 CIVAG 88 (115)
Q Consensus 84 ~iv~G 88 (115)
.|=..
T Consensus 231 ~vd~t 235 (302)
T 2ftp_A 231 VFDSS 235 (302)
T ss_dssp EEEEB
T ss_pred EEEec
Confidence 87543
No 436
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=69.10 E-value=6.9 Score=26.80 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=44.1
Q ss_pred CCCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcC-CChhhHHHHHHcCCCEE
Q 033598 10 GTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGG-LGPSTIAEAASAGANCI 85 (115)
Q Consensus 10 ~t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGG-I~~~ni~~l~~~Gad~i 85 (115)
.+..+.++.+- . ...|.|++-..-|+.+ .++-++++++..++.|+.+..+ -+.+......++||+.+
T Consensus 34 ~~~~~al~~l~-~-~~~dlvllD~~lp~~~-------g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~ 101 (225)
T 3c3w_A 34 GSVAEAMARVP-A-ARPDVAVLDVRLPDGN-------GIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGY 101 (225)
T ss_dssp SSHHHHHHHHH-H-HCCSEEEECSEETTEE-------HHHHHHHHHHHCTTCEEEEGGGSSSHHHHHHHHHHTCCCH
T ss_pred CCHHHHHHHHh-h-cCCCEEEEeCCCCCCC-------HHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHCCCCEE
Confidence 33444444433 1 3578888766567643 4556777777778888776655 46777888889998865
No 437
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=69.06 E-value=7.8 Score=28.30 Aligned_cols=73 Identities=16% Similarity=0.277 Sum_probs=40.6
Q ss_pred HhCCCCCCEEEEEeeeCCCCCc-ccchhHHHHHHHHH----hh-C-CCCcE-EEEcCCChhhHHHHHHcCCCEEEEcccc
Q 033598 20 VEGANPVEMVLVMTVEPGFGGQ-KFMPEMMDKVRSLR----NR-Y-PSLDI-EVDGGLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 20 ~~~~~~vD~vlvm~v~pG~~gq-~~~~~~~~ki~~l~----~~-~-~~~~i-~~dGGI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
+.+.+.+...++|+-.+ .... ......++++.+++ +. . +.+++ .+.+|.|.. +....+.|.|.+=.|++|
T Consensus 190 i~~~~~l~l~Gl~th~~-~~~~~~~~~~~~~~l~~~~~~l~~~~g~~~~~~~~lS~g~S~~-~~~~~~~~~~~VR~G~~l 267 (282)
T 3cpg_A 190 IGTLDGIELQGLMTIGA-HVHDETVIRRGFSHLRKTRDLILASGEPGTDRCRELSMGMTGD-MELAIAEGSTIVRVGTAI 267 (282)
T ss_dssp HHTCTTEEEEEEECCCC-CSSCHHHHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCTTT-HHHHHHTTCSEEEESTTT
T ss_pred HHhCCCceEEeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCEEEecCcHh-HHHHHHcCCCEEEeccHH
Confidence 33346788999987544 3321 11122344444443 22 1 11222 457776654 444557899999999999
Q ss_pred cCC
Q 033598 92 FGA 94 (115)
Q Consensus 92 f~~ 94 (115)
|..
T Consensus 268 yG~ 270 (282)
T 3cpg_A 268 FGE 270 (282)
T ss_dssp C--
T ss_pred hCC
Confidence 974
No 438
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=68.94 E-value=29 Score=26.03 Aligned_cols=74 Identities=11% Similarity=0.172 Sum_probs=52.2
Q ss_pred CCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHH-HHcCCCEEEEc-ccccCCCCHHHHHHHHHHHHHH
Q 033598 37 GFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEA-ASAGANCIVAG-SSVFGAPEPAHVISLMRKSVED 110 (115)
Q Consensus 37 G~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~G-saif~~~d~~~~~~~l~~~~~~ 110 (115)
-..+....+.+++.|...+++...+...+.|.=..+.++++ ...|||-+++. ..-|..-++....+.|.+.+++
T Consensus 9 e~~~g~l~~~~~eal~aA~~La~~V~av~~G~~~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~li~~ 84 (315)
T 1efv_A 9 EHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQ 84 (315)
T ss_dssp CEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHHH
T ss_pred EccCCCcCHHHHHHHHHHHHhcCcEEEEEECCchHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHHHHh
Confidence 34455677888888988887743455566775556678888 88999987776 4466666777777777776654
No 439
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.92 E-value=30 Score=25.07 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=53.3
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCC-CcccchhHHHHHHHHHhhCCCCcEEEEcCCC--hhhHHHHHHcCCCEEEEccc
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFG-GQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG--PSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~-gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~--~~ni~~l~~~Gad~iv~Gsa 90 (115)
+.++.+. + .++|++-+--.+-.|- .-.|.+ +-++++|+..|+.++-+.==++ ..-++.+.++|||.+.+...
T Consensus 44 ~~i~~l~-~-~G~d~lHvDVmDg~FVpnit~G~---~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~E 118 (246)
T 3inp_A 44 DDVKAVL-A-AGADNIHFDVMDNHYVPNLTFGP---MVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPE 118 (246)
T ss_dssp HHHHHHH-H-TTCCCEEEEEEBSSSSSCBCCCH---HHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGG
T ss_pred HHHHHHH-H-cCCCEEEEEecCCCcCcchhcCH---HHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccc
Confidence 4455544 2 4689888766664442 123444 4466666666566766654444 24577889999999988844
Q ss_pred ccCCCCHHHHHHHHHH
Q 033598 91 VFGAPEPAHVISLMRK 106 (115)
Q Consensus 91 if~~~d~~~~~~~l~~ 106 (115)
- .+++.+.++.+|+
T Consensus 119 a--~~~~~~~i~~ir~ 132 (246)
T 3inp_A 119 A--SEHIDRSLQLIKS 132 (246)
T ss_dssp G--CSCHHHHHHHHHT
T ss_pred c--chhHHHHHHHHHH
Confidence 3 2467777766654
No 440
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=68.89 E-value=31 Score=25.18 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=48.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhhCCCCcEEEEcCCC-hhhH---HHHHHcCCCEEEEcccccCC-C
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNRYPSLDIEVDGGLG-PSTI---AEAASAGANCIVAGSSVFGA-P 95 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~~~~~~i~~dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~-~ 95 (115)
.++|.+.++ |.+|..+.-..-|| ++...+...+ -|.=.|+.+ .+.+ +...++|||.+.+..-.|.. +
T Consensus 31 ~Gv~gl~v~----GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~ 105 (286)
T 2r91_A 31 KGVDVVFVA----GTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRL 105 (286)
T ss_dssp TTCCEEEET----STTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTC
T ss_pred CCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC
Confidence 579998643 76776553222233 4444444445 334445544 3333 33467899999999887766 6
Q ss_pred CHHHHHHHHHHHHH
Q 033598 96 EPAHVISLMRKSVE 109 (115)
Q Consensus 96 d~~~~~~~l~~~~~ 109 (115)
+..+..+.++++.+
T Consensus 106 s~~~l~~~f~~va~ 119 (286)
T 2r91_A 106 SERQIAKYFRDLCS 119 (286)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 77666666666544
No 441
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=68.77 E-value=5.4 Score=29.49 Aligned_cols=57 Identities=11% Similarity=0.162 Sum_probs=37.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHH-Hhh--CCCCcEEEEcCCC-hhhHHHHHHcCCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSL-RNR--YPSLDIEVDGGLG-PSTIAEAASAGAN 83 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l-~~~--~~~~~i~~dGGI~-~~ni~~l~~~Gad 83 (115)
.++|||= ...||....-.++....+++. ++. ..++++-+.|||+ .+....+.++|++
T Consensus 162 aGADfVK---TSTGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 162 AGADFIK---TSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp TTCSEEE---CCCSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred hCCCEEE---eCCCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 5899995 666776332233333334433 222 3579999999999 7788888888765
No 442
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.70 E-value=32 Score=25.25 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=47.9
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhhCCCCcEEEEcCCC-hhhHHH---HHHcCCCEEEEcccccCC-C
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNRYPSLDIEVDGGLG-PSTIAE---AASAGANCIVAGSSVFGA-P 95 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~~~~~~i~~dGGI~-~~ni~~---l~~~Gad~iv~Gsaif~~-~ 95 (115)
.++|.+.++ |.+|..+.-..-|| ++...+...+ -|.=.|+.+ .+.+.. ..++|||.+.+..-.|.. +
T Consensus 32 ~Gv~gl~~~----GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~ 106 (293)
T 1w3i_A 32 KGIDKLFVN----GTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRM 106 (293)
T ss_dssp TTCCEEEES----STTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Confidence 579988644 77776553333333 3334444444 344455544 333333 345799999999887766 6
Q ss_pred CHHHHHHHHHHHHH
Q 033598 96 EPAHVISLMRKSVE 109 (115)
Q Consensus 96 d~~~~~~~l~~~~~ 109 (115)
+..+..+.++++.+
T Consensus 107 s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 107 SEKHLVKYFKTLCE 120 (293)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 76666666665544
No 443
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=68.64 E-value=39 Score=26.18 Aligned_cols=89 Identities=20% Similarity=0.327 Sum_probs=57.3
Q ss_pred ecCCCCHHhHHHhHhC-CCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE---------------cCCC
Q 033598 7 LKPGTSVEEVYPLVEG-ANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD---------------GGLG 70 (115)
Q Consensus 7 l~p~t~~~~~~~~~~~-~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d---------------GGI~ 70 (115)
++|...-|.+.+..-| ..++|+|+ |.||.. -++-|+++++.. ++|+.+= |=++
T Consensus 241 mdpaN~~EAlrE~~lDi~EGAD~vM---VKPal~-------YLDIi~~vk~~~-~~PvaaYqVSGEYAMikAAa~~GwiD 309 (356)
T 3obk_A 241 MDPSNSREAEREAEADASEGADMLM---VKPGLP-------YLDVLAKIREKS-KLPMVAYHVSGEYAMLKAAAEKGYIS 309 (356)
T ss_dssp BCTTCSHHHHHHHHHHHHTTCSEEE---EESSGG-------GHHHHHHHHHHC-SSCEEEEECHHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHHHhhHhcCCCEEE---ecCCCc-------HHHHHHHHHhcC-CCCEEEEEccHHHHHHHHHHHcCCcc
Confidence 3566666666665544 36899997 788732 455677777764 6787652 4455
Q ss_pred -----hhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHHHHhh
Q 033598 71 -----PSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMRKSVEDAQK 113 (115)
Q Consensus 71 -----~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~~~~~~~~~ 113 (115)
.|.+-.++.+|||+|+.=- + .+.+++|++-.+.++|
T Consensus 310 ~~~~v~Esl~~~kRAGAd~IiTYf----A---~~~a~~L~~~~~~~~~ 350 (356)
T 3obk_A 310 EKDTVLEVLKSFRRAGADAVATYY----A---KEAAKWMVEDMKGTQK 350 (356)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEETT----H---HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHcCCCEEehhh----H---HHHHHHHHhcchhhhh
Confidence 4566778999999996532 1 3455667666665554
No 444
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=68.29 E-value=16 Score=21.52 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=43.4
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVIS 102 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~ 102 (115)
...|.+++-..-|+..| ++.++++++. ++.|+.+. +.-+.+......++|++.++. +.-++.+-..
T Consensus 44 ~~~dlvl~D~~l~~~~g-------~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~ 110 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDG-------LEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVT-----KPFSNRELQA 110 (120)
T ss_dssp HCCSEEEECSSCSSSCH-------HHHHHHHHHH-CCCCEEEEESCCSHHHHHHHHHHTCSEEEE-----SSCCHHHHHH
T ss_pred CCCCEEEEeccCCCCCH-------HHHHHHHHhC-CCCCEEEEecCCchHHHHHHHhCCHhheEe-----CCCCHHHHHH
Confidence 35788876544565443 3445556554 56776654 555666777788999997743 4445555555
Q ss_pred HHHHHH
Q 033598 103 LMRKSV 108 (115)
Q Consensus 103 ~l~~~~ 108 (115)
.++..+
T Consensus 111 ~i~~~~ 116 (120)
T 2a9o_A 111 RVKALL 116 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 445
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=67.40 E-value=28 Score=24.08 Aligned_cols=70 Identities=14% Similarity=0.190 Sum_probs=36.7
Q ss_pred HhHHHhHhCCCCCCEEEEEee-eCCCCCcccchhHHHHHHHHHhhCCCC-cEEEEcCCChhhHHHHHHcCCCEEEEccc
Q 033598 14 EEVYPLVEGANPVEMVLVMTV-EPGFGGQKFMPEMMDKVRSLRNRYPSL-DIEVDGGLGPSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v-~pG~~gq~~~~~~~~ki~~l~~~~~~~-~i~~dGGI~~~ni~~l~~~Gad~iv~Gsa 90 (115)
..++... ...|.|.++.. +|.. +.. ...-+|++-++....+. .+.++. ...-++.-+.+.|+++++-|--
T Consensus 39 ~ii~~A~---~~~D~Viv~v~~np~K--~~~-~s~eeR~~mv~~a~~~~~~v~V~~-~e~l~vd~~~~~~a~~ivrGlr 110 (177)
T 3nbk_A 39 DIFERAA---AQFDEVVVAILVNPAK--TGM-FDLDERIAMVKESTTHLPNLRVQV-GHGLVVDFVRSCGMTAIVKGLR 110 (177)
T ss_dssp HHHHHHH---HHSSEEEEEECCCTTS--CCS-SCHHHHHHHHHHHCTTCTTEEEEE-CCSCHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHH---HHCCEEEEEEcCCCCC--CCC-CCHHHHHHHHHHHhCCCCCEEEEe-cCchHHHHHHHcCCCEEEECCC
Confidence 4555555 55688877655 4422 222 22345565555433222 244443 1223455566689999988843
No 446
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=67.39 E-value=26 Score=25.71 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=42.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHc--CCCEEEEcccc
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASA--GANCIVAGSSV 91 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~--Gad~iv~Gsai 91 (115)
.++|+|=|..-.+ ...-......-++.+++.. ++|+++|.- +++.++..+++ |++++-..|+.
T Consensus 46 ~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~-~~pisIDT~-~~~v~~aal~a~~Ga~iINdvs~~ 110 (271)
T 2yci_X 46 KGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVV-DLPCCLDST-NPDAIEAGLKVHRGHAMINSTSAD 110 (271)
T ss_dssp TTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHC-CCCEEEECS-CHHHHHHHHHHCCSCCEEEEECSC
T ss_pred CCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhC-CCeEEEeCC-CHHHHHHHHHhCCCCCEEEECCCC
Confidence 6899987643332 2222233344455666553 799999988 89999999999 99999766653
No 447
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=66.91 E-value=13 Score=27.75 Aligned_cols=65 Identities=8% Similarity=0.182 Sum_probs=38.7
Q ss_pred CCCCEEEEEeeeCC---CCCcccchhHHHHHHHHHhhCCCCcEE-EEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 24 NPVEMVLVMTVEPG---FGGQKFMPEMMDKVRSLRNRYPSLDIE-VDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 24 ~~vD~vlvm~v~pG---~~gq~~~~~~~~ki~~l~~~~~~~~i~-~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
.++|.|.+.---.| .+...|....+..++++.+.....++. ..|| ....++.+.++|+|++-+..
T Consensus 202 aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~iih~~g~-~~~~l~~~~~~g~d~i~~d~ 270 (348)
T 4ay7_A 202 AGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVTVLHICGN-VNPILSDMADCGFEGLSVEE 270 (348)
T ss_dssp HTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEEEECCSC-CHHHHHHHHTSCCSEEECCG
T ss_pred cCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCcEEEecCC-cHHHHHHHHHhccccccccc
Confidence 47898876422222 222334444444566666555555554 4455 45678999999999886543
No 448
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=66.90 E-value=26 Score=24.67 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHhhCCCCcEEE---EcCCChhhH----HHHHHcCCCEEEEccc
Q 033598 45 PEMMDKVRSLRNRYPSLDIEV---DGGLGPSTI----AEAASAGANCIVAGSS 90 (115)
Q Consensus 45 ~~~~~ki~~l~~~~~~~~i~~---dGGI~~~ni----~~l~~~Gad~iv~Gsa 90 (115)
....+.++++++...++++-+ .++.+.+++ +.+.++|||++...+.
T Consensus 102 ~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg 154 (225)
T 1mzh_A 102 DFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTG 154 (225)
T ss_dssp HHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCC
Confidence 345566777777654455555 688888764 4456779999955543
No 449
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=66.42 E-value=15 Score=27.63 Aligned_cols=104 Identities=12% Similarity=0.204 Sum_probs=65.3
Q ss_pred ceEEEecCCCCHHhHHHhHhCCCCCCEEEEEeeeCC-CCCc---ccchhHHHHHHHHHhh--CCCCcEEEEcCCChhhHH
Q 033598 2 RPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPG-FGGQ---KFMPEMMDKVRSLRNR--YPSLDIEVDGGLGPSTIA 75 (115)
Q Consensus 2 k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~pG-~~gq---~~~~~~~~ki~~l~~~--~~~~~i~~dGGI~~~ni~ 75 (115)
++.|-+.|+ .+.++...+ -++|+|=+ +.| |... .-....++++.+..+. ..++.+.+=-|+|.+|+.
T Consensus 157 rVSLFIDpd--~~qI~aA~~--~GAd~IEL---hTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnAGHGL~y~Nv~ 229 (278)
T 3gk0_A 157 RVSLFIDPD--EAQIRAAHE--TGAPVIEL---HTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNAGHGLHYTNVQ 229 (278)
T ss_dssp EEEEEECSC--HHHHHHHHH--HTCSEEEE---CCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEECTTCCTTTHH
T ss_pred EEEEEeCCC--HHHHHHHHH--hCcCEEEE---ecchhhccCCchhHHHHHHHHHHHHHHHHHcCCEEecCCCCCHHHHH
Confidence 455666554 333333331 37888854 444 2221 1123355555555432 247889999999999999
Q ss_pred HHHH-cCCCEEEEcccccCCC---CHHHHHHHHHHHHHHHh
Q 033598 76 EAAS-AGANCIVAGSSVFGAP---EPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 76 ~l~~-~Gad~iv~Gsaif~~~---d~~~~~~~l~~~~~~~~ 112 (115)
.+.+ -+..-+.+|.+|+... -..++++++++.+.+++
T Consensus 230 ~ia~ip~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~~ar 270 (278)
T 3gk0_A 230 AIAALPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVAAR 270 (278)
T ss_dssp HHHTCTTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 8854 3456788888776422 56899999999988754
No 450
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=65.82 E-value=19 Score=26.38 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=49.9
Q ss_pred HhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCCh----------hhHHHHHHcCCC
Q 033598 14 EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGP----------STIAEAASAGAN 83 (115)
Q Consensus 14 ~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~----------~ni~~l~~~Gad 83 (115)
+..++.+ ...|++.+-...++.......+...+-++++++. +.++.+|=...+ +.+.++.. .+|
T Consensus 137 ~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~-~~d 210 (328)
T 4e69_A 137 DALAAAM---ARADVVYFSGITLAILDQCGRATLLRALAQARAT--GRTIAFDPNLRPRLWAGTGEMTETIMQGAA-VSD 210 (328)
T ss_dssp HHHHHHH---TTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGCSCHHHHHHHHHHHHT-TCS
T ss_pred ccchHHh---cCCCEEEECCchhhccCchHHHHHHHHHHHHHhC--CCEEEEeCCCChhhcCCHHHHHHHHHHHHH-hCC
Confidence 3344667 7899998765555433222222223334444443 588999986543 34555655 689
Q ss_pred EEEEc----ccccCCCCHHHHHHHHH
Q 033598 84 CIVAG----SSVFGAPEPAHVISLMR 105 (115)
Q Consensus 84 ~iv~G----saif~~~d~~~~~~~l~ 105 (115)
++... ..++..+++.+.++.|.
T Consensus 211 il~~N~~E~~~l~g~~~~~~~~~~l~ 236 (328)
T 4e69_A 211 IALPSFEDEAAWFGDAGPDATADRYA 236 (328)
T ss_dssp EECCBHHHHHHHHTCSSHHHHHHHHH
T ss_pred EEeCCHHHHHHHcCCCCHHHHHHHHH
Confidence 88665 33566667766666654
No 451
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=65.74 E-value=12 Score=28.02 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=42.3
Q ss_pred EEEeeeCCC---CCcccchhHHHHHH-HHHhh--------CCCCcEEEEcCCChhhHHHHHH-cCCCEEEEcccccCCCC
Q 033598 30 LVMTVEPGF---GGQKFMPEMMDKVR-SLRNR--------YPSLDIEVDGGLGPSTIAEAAS-AGANCIVAGSSVFGAPE 96 (115)
Q Consensus 30 lvm~v~pG~---~gq~~~~~~~~ki~-~l~~~--------~~~~~i~~dGGI~~~ni~~l~~-~Gad~iv~Gsaif~~~d 96 (115)
++++-+|-. +|..-.++..+.+. .+|+. ..+++|.==|+++++|+.+|.. ..+|++.+|++=++.++
T Consensus 185 vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgASL~~~~ 264 (275)
T 3kxq_A 185 IIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLKAID 264 (275)
T ss_dssp EEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHH
T ss_pred EEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCcCHhHHHHHHcCCccceEEeehhhcCHHH
Confidence 355677732 45554444433322 22322 1368999999999999999864 58999999988766544
Q ss_pred H
Q 033598 97 P 97 (115)
Q Consensus 97 ~ 97 (115)
.
T Consensus 265 F 265 (275)
T 3kxq_A 265 F 265 (275)
T ss_dssp H
T ss_pred H
Confidence 4
No 452
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=65.56 E-value=9.1 Score=28.61 Aligned_cols=47 Identities=9% Similarity=0.099 Sum_probs=34.1
Q ss_pred CcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC-CCEEEE
Q 033598 40 GQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG-ANCIVA 87 (115)
Q Consensus 40 gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G-ad~iv~ 87 (115)
.|++.++.++.++++++.. ++||.+|+.+ +.+.+.++.+.| +|++.+
T Consensus 216 E~P~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 216 EQPVRREDIEGLKFVRFHS-PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp ECCSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred eCCCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 4556556667777777664 6999999998 567777776666 788765
No 453
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=65.44 E-value=26 Score=23.06 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCHHhHHHh--HhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 11 TSVEEVYPL--VEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 11 t~~~~~~~~--~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
+..+.+.+. + ..+|+|++++ |. ......-+..+++.++...+.+. ..+.++...+.+.|+|.++..
T Consensus 92 ~~~~~l~~~~~~---~~ad~vi~~~--~~------~~~~~~~~~~~~~~~~~~~ii~~-~~~~~~~~~l~~~G~~~vi~p 159 (183)
T 3c85_A 92 TDPDFWERILDT---GHVKLVLLAM--PH------HQGNQTALEQLQRRNYKGQIAAI-AEYPDQLEGLLESGVDAAFNI 159 (183)
T ss_dssp TCHHHHHTBCSC---CCCCEEEECC--SS------HHHHHHHHHHHHHTTCCSEEEEE-ESSHHHHHHHHHHTCSEEEEH
T ss_pred CCHHHHHhccCC---CCCCEEEEeC--CC------hHHHHHHHHHHHHHCCCCEEEEE-ECCHHHHHHHHHcCCCEEEch
Confidence 444555554 4 6789887642 21 01122224455666666666665 457888899999999988775
Q ss_pred cc
Q 033598 89 SS 90 (115)
Q Consensus 89 sa 90 (115)
..
T Consensus 160 ~~ 161 (183)
T 3c85_A 160 YS 161 (183)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 454
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=65.26 E-value=34 Score=24.31 Aligned_cols=43 Identities=14% Similarity=0.246 Sum_probs=28.7
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChh---hHHHHHHcCCCEEEEcc
Q 033598 46 EMMDKVRSLRNRYPSLDIEVDGGLGPS---TIAEAASAGANCIVAGS 89 (115)
Q Consensus 46 ~~~~ki~~l~~~~~~~~i~~dGGI~~~---ni~~l~~~Gad~iv~Gs 89 (115)
..++.++++|+. .++|+.+.+-.++. .+..+.++|+|++++..
T Consensus 81 ~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d 126 (262)
T 1rd5_A 81 AVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPD 126 (262)
T ss_dssp HHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTT
T ss_pred HHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcC
Confidence 356667888776 57888776423321 23458899999998763
No 455
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=65.23 E-value=14 Score=30.32 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=57.1
Q ss_pred eEEEecCCCCHHhHHHhHhCCCCCCEEEEEeee--------------CCCCCcccchhHHHHHHHHHhh--CCCCcEEEE
Q 033598 3 PGVALKPGTSVEEVYPLVEGANPVEMVLVMTVE--------------PGFGGQKFMPEMMDKVRSLRNR--YPSLDIEVD 66 (115)
Q Consensus 3 ~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v~--------------pG~~gq~~~~~~~~ki~~l~~~--~~~~~i~~d 66 (115)
+|+.+-...-+..+..+. ..+|++-+.+-+ -++-++++.|..+..++.+.+. ..++++.+-
T Consensus 426 vg~MIE~P~a~~~ad~ia---~~vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvC 502 (575)
T 2hwg_A 426 IGVMVETPAAATIARHLA---KEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMC 502 (575)
T ss_dssp EEEEECSHHHHHTHHHHH---TTCSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECcHHHHHHHHHHH---HhCCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 455554333446777777 779999876532 1223566777777777666432 136888884
Q ss_pred cCC--ChhhHHHHHHcCCCEEEEccc
Q 033598 67 GGL--GPSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 67 GGI--~~~ni~~l~~~Gad~iv~Gsa 90 (115)
|.. ++..++.+...|.|.+.++..
T Consensus 503 Ge~agdp~~~~~l~~lG~~~~S~~p~ 528 (575)
T 2hwg_A 503 GELAGDERATLLLLGMGLDEFSMSAI 528 (575)
T ss_dssp STTTTCTTTHHHHHHTTCCEEEECGG
T ss_pred CCCCCCHHHHHHHHHCCCCEEEECcc
Confidence 432 788999999999999988854
No 456
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=65.21 E-value=13 Score=27.66 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=35.4
Q ss_pred HHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHH
Q 033598 49 DKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMR 105 (115)
Q Consensus 49 ~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~ 105 (115)
+-++++++..++.+|++.=- |.+.+.+..++|+|++.+.- |..++.++.++.++
T Consensus 183 ~av~~ar~~~~~~~I~Vev~-t~eea~eal~aGaD~I~LDn--~~~~~~~~~v~~l~ 236 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVD-SLEQLDAVLPEKPELILLDN--FAVWQTQTAVQRRD 236 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEES-SHHHHHHHGGGCCSEEEEET--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEeC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhh
Confidence 44677777766445555443 78999999999999887775 43334444444444
No 457
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=65.01 E-value=43 Score=25.35 Aligned_cols=66 Identities=17% Similarity=0.261 Sum_probs=43.4
Q ss_pred CCCCEEEEEe--eeCCCC----Ccccc---hhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcccc
Q 033598 24 NPVEMVLVMT--VEPGFG----GQKFM---PEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 24 ~~vD~vlvm~--v~pG~~----gq~~~---~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++|+|=|.+ ..||.. .-.-. .....-|+.+++. .++||++|=- +++.++..+++|++++--.|+.
T Consensus 61 ~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~~vpISIDT~-~~~Va~aAl~aGa~iINDVsg~ 135 (314)
T 3tr9_A 61 EGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-FPQLISVDTS-RPRVMREAVNTGADMINDQRAL 135 (314)
T ss_dssp TTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-CCSEEEEECS-CHHHHHHHHHHTCCEEEETTTT
T ss_pred CCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-CCCeEEEeCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 6899987764 567744 11111 1133334555554 3799999975 7889999888999988777664
No 458
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=64.81 E-value=4.5 Score=32.27 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=33.8
Q ss_pred chhHHHHHHHHHhhCCCCcEEEEc------CCC-------hhhHHHHHHcCCCEEEEcccc
Q 033598 44 MPEMMDKVRSLRNRYPSLDIEVDG------GLG-------PSTIAEAASAGANCIVAGSSV 91 (115)
Q Consensus 44 ~~~~~~ki~~l~~~~~~~~i~~dG------GI~-------~~ni~~l~~~Gad~iv~Gsai 91 (115)
.++..+.++++++..++.++.+-. |.+ ...++...++|+|.+-+-.++
T Consensus 63 ~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~ 123 (464)
T 2nx9_A 63 GEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAM 123 (464)
T ss_dssp CCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEec
Confidence 466788888888766777766543 332 456788899999998765444
No 459
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=64.78 E-value=12 Score=27.14 Aligned_cols=87 Identities=11% Similarity=0.117 Sum_probs=56.3
Q ss_pred CCCCHHhHHHhHhCCCCCCEEEEEeeeC-CCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 9 PGTSVEEVYPLVEGANPVEMVLVMTVEP-GFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~~~~~~~vD~vlvm~v~p-G~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
..+..+.++.+-+ ..+|.|++-..-| |.+|-.+ ++++|+.. ++||.+--|-+ +......++|+|.+
T Consensus 191 a~~g~eAl~~~~~--~~~dlvl~D~~MPd~mdG~e~-------~~~ir~~~-~~piI~lT~~~-~~~~~~~~~G~~~~-- 257 (286)
T 3n0r_A 191 AATRGEALEAVTR--RTPGLVLADIQLADGSSGIDA-------VKDILGRM-DVPVIFITAFP-ERLLTGERPEPTFL-- 257 (286)
T ss_dssp ESSHHHHHHHHHH--CCCSEEEEESCCTTSCCTTTT-------THHHHHHT-TCCEEEEESCG-GGGCCSSSCCCSSE--
T ss_pred eCCHHHHHHHHHh--CCCCEEEEcCCCCCCCCHHHH-------HHHHHhcC-CCCEEEEeCCH-HHHHHHHhCCCcEE--
Confidence 3445566665542 4689999887789 7887554 34445544 78887777654 44555667888765
Q ss_pred cccccCCCCHHHHHHHHHHHHHHH
Q 033598 88 GSSVFGAPEPAHVISLMRKSVEDA 111 (115)
Q Consensus 88 Gsaif~~~d~~~~~~~l~~~~~~~ 111 (115)
|.+.-++.+-...++..+...
T Consensus 258 ---l~KP~~~~~L~~~i~~~l~~~ 278 (286)
T 3n0r_A 258 ---ITKPFQPETVKAAIGQALFFH 278 (286)
T ss_dssp ---EESSCCHHHHHHHHHHHHHHS
T ss_pred ---EeCCCCHHHHHHHHHHHHHhC
Confidence 445447777777777777643
No 460
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=64.65 E-value=33 Score=25.99 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=62.5
Q ss_pred EEecCCCCHHhHHHhHhCCCCCCEEEEEee-----eCCCCCc--ccchhHHHHHHHHHhhCCCCcEEEEc----CCCh--
Q 033598 5 VALKPGTSVEEVYPLVEGANPVEMVLVMTV-----EPGFGGQ--KFMPEMMDKVRSLRNRYPSLDIEVDG----GLGP-- 71 (115)
Q Consensus 5 lal~p~t~~~~~~~~~~~~~~vD~vlvm~v-----~pG~~gq--~~~~~~~~ki~~l~~~~~~~~i~~dG----GI~~-- 71 (115)
+.+++.+..+...--- .++|.|++-.- .-|+... --..+++..++++.+-.++.|+.+|+ | ++
T Consensus 42 ~~~~ayD~~sA~i~e~---aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~ 117 (318)
T 1zlp_A 42 LMPGVQDALSAAVVEK---TGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLN 117 (318)
T ss_dssp EEEEECSHHHHHHHHH---TTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHH
T ss_pred EEecCCCHHHHHHHHH---cCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHH
Confidence 3444555555433222 67899988652 1244332 22467777888887776689999995 4 54
Q ss_pred --hhHHHHHHcCCCEEEEcccccC--------C--CCHHHHHHHHHHHHH
Q 033598 72 --STIAEAASAGANCIVAGSSVFG--------A--PEPAHVISLMRKSVE 109 (115)
Q Consensus 72 --~ni~~l~~~Gad~iv~Gsaif~--------~--~d~~~~~~~l~~~~~ 109 (115)
+|++.+.++||..+-+=...+- . -+..+.+.+++...+
T Consensus 118 v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~ 167 (318)
T 1zlp_A 118 VQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAARE 167 (318)
T ss_dssp HHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHH
Confidence 5677789999999988655431 1 133456666665443
No 461
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=64.54 E-value=43 Score=25.18 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=51.2
Q ss_pred hHHHhHhCCCCCCEEEEEe--eeCCCCCc---ccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEcc
Q 033598 15 EVYPLVEGANPVEMVLVMT--VEPGFGGQ---KFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAGS 89 (115)
Q Consensus 15 ~~~~~~~~~~~vD~vlvm~--v~pG~~gq---~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gs 89 (115)
..+.+++ .++|+|=|.+ ..||...- .-......-|+.+++.. ++||++|=- +++.++..+++||++|--.|
T Consensus 38 ~a~~~v~--~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSIDT~-~~~Va~aAl~aGa~iINDVs 113 (314)
T 2vef_A 38 QARKLIA--EGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISIDTW-KSQVAEAALAAGADLVNDIT 113 (314)
T ss_dssp HHHHHHH--TTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEECS-CHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHH--CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEEeCC-CHHHHHHHHHcCCCEEEECC
Confidence 3344442 6899987764 34664321 11222333345555543 799999976 89999999999999998888
Q ss_pred cccCCCCHHHHHHH
Q 033598 90 SVFGAPEPAHVISL 103 (115)
Q Consensus 90 aif~~~d~~~~~~~ 103 (115)
+.-..++....+.+
T Consensus 114 g~~~d~~m~~v~a~ 127 (314)
T 2vef_A 114 GLMGDEKMPHVVAE 127 (314)
T ss_dssp TTCSCTTHHHHHHH
T ss_pred CCCCChHHHHHHHH
Confidence 75434555444433
No 462
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=64.06 E-value=13 Score=29.63 Aligned_cols=75 Identities=9% Similarity=0.084 Sum_probs=46.1
Q ss_pred CHHhHHHhHhCCCCCCEEEEEe--eeCCCCCcccchhHHHH----HHHHHh---hCC-CCcEEEEcCCChhhHHHHHH--
Q 033598 12 SVEEVYPLVEGANPVEMVLVMT--VEPGFGGQKFMPEMMDK----VRSLRN---RYP-SLDIEVDGGLGPSTIAEAAS-- 79 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~--v~pG~~gq~~~~~~~~k----i~~l~~---~~~-~~~i~~dGGI~~~ni~~l~~-- 79 (115)
-++..+.+++ .++|+|=|.+ ..||...-.- .+-+++ |+.+++ ..+ ++||++|=- +++.++..++
T Consensus 214 al~~A~~mv~--~GAdIIDIGgeSTrPGa~~Vs~-~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~-~~~VaeaAL~~~ 289 (442)
T 3mcm_A 214 RKLNLDELIQ--SGAEIIDIGAESTKPDAKPISI-EEEFNKLNEFLEYFKSQLANLIYKPLVSIDTR-KLEVMQKILAKH 289 (442)
T ss_dssp HHHHHHHHHH--HTCSEEEEECCCCCC----CCH-HHHHHHHHHHHHHHHHHTTTCSSCCEEEEECC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHhhccccCCCCeEEEeCC-CHHHHHHHHhhC
Confidence 3445555552 5889887763 5576432221 122333 556665 222 789999976 8999999988
Q ss_pred cCCCE-EEEccc
Q 033598 80 AGANC-IVAGSS 90 (115)
Q Consensus 80 ~Gad~-iv~Gsa 90 (115)
+||++ |--.|+
T Consensus 290 aGa~i~INDVsg 301 (442)
T 3mcm_A 290 HDIIWMINDVEC 301 (442)
T ss_dssp GGGCCEEEECCC
T ss_pred CCCCEEEEcCCC
Confidence 99999 766666
No 463
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=63.58 E-value=11 Score=27.66 Aligned_cols=64 Identities=19% Similarity=0.386 Sum_probs=42.2
Q ss_pred EEeeeCCC---CCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHH-HHcCCCEEEEcccccCC
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEA-ASAGANCIVAGSSVFGA 94 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~Gsaif~~ 94 (115)
++.-+|-. +|....++..+.+. .+|+ .+ .+++|.-=|+++++|..++ .+.++|++-+|++-.+.
T Consensus 161 vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 161 VIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp EEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred EEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 55777832 45555544443322 3333 22 2489999999999999987 57899999999987764
No 464
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=63.47 E-value=14 Score=28.08 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=34.2
Q ss_pred cccchhHHHHHHHHHhhCCCCcEEEEcCCC-hhhHHHHHHcC-CCEEEEcc
Q 033598 41 QKFMPEMMDKVRSLRNRYPSLDIEVDGGLG-PSTIAEAASAG-ANCIVAGS 89 (115)
Q Consensus 41 q~~~~~~~~ki~~l~~~~~~~~i~~dGGI~-~~ni~~l~~~G-ad~iv~Gs 89 (115)
|++.+..++.++++++.. ++||.+|+.++ .+.+.++++.| +|++.+.-
T Consensus 223 qP~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 272 (384)
T 2pgw_A 223 QPTVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYEICRQRAADMICIGP 272 (384)
T ss_dssp CCSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcc
Confidence 334445566677777654 69999999984 77888877665 89887753
No 465
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=63.31 E-value=23 Score=21.66 Aligned_cols=72 Identities=19% Similarity=0.332 Sum_probs=41.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHc-CCCEEEEcccccCCCCHHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASA-GANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~-Gad~iv~Gsaif~~~d~~~~~ 101 (115)
...|.+++-..-||..| ++.++++++..++.|+.+..+- +.+........ |++.++. +.-++.+-.
T Consensus 43 ~~~dlvl~D~~lp~~~g-------~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~ 110 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTG-------VDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLT-----KPWHPEQLL 110 (139)
T ss_dssp SCEEEEEEESCCSSSCH-------HHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEEE-----SSCCHHHHH
T ss_pred CCCCEEEEeCCCCCCcH-------HHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhcc-----CCCCHHHHH
Confidence 35788876655576443 4456677776677776665554 44555555554 6877643 333444444
Q ss_pred HHHHHH
Q 033598 102 SLMRKS 107 (115)
Q Consensus 102 ~~l~~~ 107 (115)
..++..
T Consensus 111 ~~i~~~ 116 (139)
T 2jk1_A 111 SSARNA 116 (139)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 466
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=63.26 E-value=20 Score=26.62 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=46.5
Q ss_pred EEeeeCCC---CCcccchhHHHHHH-HHHh----hC-----CCCcEEEEcCCChhhHHHHH-HcCCCEEEEcccccCCCC
Q 033598 31 VMTVEPGF---GGQKFMPEMMDKVR-SLRN----RY-----PSLDIEVDGGLGPSTIAEAA-SAGANCIVAGSSVFGAPE 96 (115)
Q Consensus 31 vm~v~pG~---~gq~~~~~~~~ki~-~l~~----~~-----~~~~i~~dGGI~~~ni~~l~-~~Gad~iv~Gsaif~~~d 96 (115)
+++-+|=. +|..-.++..+.+. .+|+ .+ .+++|.==|+++++|+.+|. +..+|++.+|++=++.++
T Consensus 168 vIAYEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~el~~~~diDG~LVGgASL~~~~ 247 (267)
T 3ta6_A 168 VIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEH 247 (267)
T ss_dssp EEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHH
T ss_pred EEEECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHH
Confidence 44677722 46555544444322 2232 22 25899999999999999874 678999999988776554
Q ss_pred HHHHH
Q 033598 97 PAHVI 101 (115)
Q Consensus 97 ~~~~~ 101 (115)
..+-+
T Consensus 248 F~~Ii 252 (267)
T 3ta6_A 248 FATLA 252 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 467
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=63.15 E-value=19 Score=20.73 Aligned_cols=52 Identities=19% Similarity=0.172 Sum_probs=33.6
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhC--CCCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRY--PSLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~--~~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
..|.+++-.-.|+. ..++.++++++.. ++.|+.+..+-.... ...+.|++.+
T Consensus 45 ~~dlii~d~~~~~~-------~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~--~~~~~g~~~~ 98 (119)
T 2j48_A 45 QPIVILMAWPPPDQ-------SCLLLLQHLREHQADPHPPLVLFLGEPPVD--PLLTAQASAI 98 (119)
T ss_dssp CCSEEEEECSTTCC-------THHHHHHHHHHTCCCSSCCCEEEESSCCSS--HHHHHHCSEE
T ss_pred CCCEEEEecCCCCC-------CHHHHHHHHHhccccCCCCEEEEeCCCCch--hhhhcCHHHh
Confidence 57888765444542 2455677777664 678877666655444 7778898876
No 468
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=63.00 E-value=8 Score=26.42 Aligned_cols=53 Identities=15% Similarity=0.122 Sum_probs=34.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEEcCCChhhHHHHHHcCCCEE
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLGPSTIAEAASAGANCI 85 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~~~ni~~l~~~Gad~i 85 (115)
.++|++-+ +-+. +...+-++++|+..+ ++++.+.--.+++.+....++|||++
T Consensus 34 ~G~~~iev---~~~~------~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 34 GGVHLIEI---TFTV------PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI 87 (205)
T ss_dssp TTCCEEEE---ETTS------TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE
T ss_pred CCCCEEEE---eCCC------hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE
Confidence 46888843 3221 123344666666543 56666544468999999999999999
No 469
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=62.98 E-value=32 Score=25.30 Aligned_cols=73 Identities=11% Similarity=0.110 Sum_probs=44.3
Q ss_pred CCHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCC---hhhHHHHHHcCCCEEEE
Q 033598 11 TSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLG---PSTIAEAASAGANCIVA 87 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~---~~ni~~l~~~Gad~iv~ 87 (115)
..++.+++.++. +....|.+..++. .+|..+...-+++|.++.+.+ ++.+.+|+--+ +-. +.+.|+|+++.
T Consensus 122 ~d~~~l~~~i~~-~~~~~v~~~~~~~-~~G~~~~~~~l~~i~~~~~~~-~~~li~D~~~~g~~~~~---~~~~~~d~~~~ 195 (379)
T 3ke3_A 122 VDIETAVAKIKE-DKSAIVYAPHVET-SSGIILSEEYIKALSEAVHSV-GGLLVIDCIASGCVWLD---MKELGIDVLIS 195 (379)
T ss_dssp CCHHHHHHHHHH-HTCSEEEEESEET-TTTEECCHHHHHHHHHHHHHT-TCEEEEECTTCTTCCCC---HHHHTCSEEEE
T ss_pred CCHHHHHHHHhh-cCCcEEEEEeecC-CCceeCCHHHHHHHHHHHHHc-CCEEEEEecccCCcccc---ccccCCCEEEe
Confidence 456778877732 2566666555544 345555555577888887664 78899994311 112 23458898877
Q ss_pred cc
Q 033598 88 GS 89 (115)
Q Consensus 88 Gs 89 (115)
++
T Consensus 196 s~ 197 (379)
T 3ke3_A 196 AP 197 (379)
T ss_dssp CT
T ss_pred cc
Confidence 63
No 470
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=62.96 E-value=54 Score=25.78 Aligned_cols=85 Identities=15% Similarity=0.258 Sum_probs=54.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhh---CCCCcEEEEcCCChhhHHHH-HHcCCCEEEE-cccccCCCC-H
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNR---YPSLDIEVDGGLGPSTIAEA-ASAGANCIVA-GSSVFGAPE-P 97 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~---~~~~~i~~dGGI~~~ni~~l-~~~Gad~iv~-Gsaif~~~d-~ 97 (115)
.++|.+.+-++.--+.+.. ...+.-.+.+++- .+.+-=++.|||+..+++.+ ...|-|++.. |..++..++ +
T Consensus 292 ~G~D~ih~gt~~GK~~g~~--~~~~~~~~~~~~~w~~~~~~~PV~SGGih~~~~p~~~~~~G~D~vl~~GGG~~gHP~G~ 369 (413)
T 2oem_A 292 AGADFVLFPSPYGSVALER--EQALGIARALTDDQEPFARAFPVPSAGIHPGLVPLIIRDFGLDTIVNAGGGIHGHPDGA 369 (413)
T ss_dssp HTCSEEEEECSSSSSCCCH--HHHHHHHHHHHCTTSSSCCCEEEEESSCCGGGHHHHHHHHCSSSEEEESHHHHTSTTHH
T ss_pred cCCCeeecCCcCCCcCCCH--HHHHHHHHHHhccccCCCCcCCCCccCcchhhHHHHHHHhCCceEEEeCccccCCCCch
Confidence 5889998766522222221 2233334444442 23455789999999999986 6679887654 577998764 6
Q ss_pred HHHHHHHHHHHHH
Q 033598 98 AHVISLMRKSVED 110 (115)
Q Consensus 98 ~~~~~~l~~~~~~ 110 (115)
++-++.+|..++.
T Consensus 370 aaGa~A~R~A~eA 382 (413)
T 2oem_A 370 IGGGRAFRAAIDA 382 (413)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777788877654
No 471
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=62.51 E-value=32 Score=23.01 Aligned_cols=68 Identities=12% Similarity=0.154 Sum_probs=44.2
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC-CCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCC-CHHHH
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP-SLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAP-EPAHV 100 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~-~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~-d~~~~ 100 (115)
...|.|+ -|+.+ .++-++++++. + ++|+.+. +.-+.+......++||+.++. +.- ++.+-
T Consensus 43 ~~~dlvi----lp~~~-------g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~-----Kp~~~~~~L 105 (223)
T 2hqr_A 43 RNYDLVM----VSDKN-------ALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIA-----KPYRSIKAL 105 (223)
T ss_dssp SCCSEEE----ECCTT-------HHHHHHHHHHH-CTTSEEEEEESSCCHHHHHHHHHHTCSEEEE-----TTCSCTHHH
T ss_pred CCCCEEE----eCCCC-------HHHHHHHHHhC-CCCCcEEEEECCCCHHHHHHHHHcCCCEEEE-----CCCCCHHHH
Confidence 3688887 35533 44556777766 5 7886654 555677888889999998754 434 55555
Q ss_pred HHHHHHHH
Q 033598 101 ISLMRKSV 108 (115)
Q Consensus 101 ~~~l~~~~ 108 (115)
...++..+
T Consensus 106 ~~~i~~~~ 113 (223)
T 2hqr_A 106 VARIEARL 113 (223)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 55555544
No 472
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.22 E-value=27 Score=22.13 Aligned_cols=66 Identities=20% Similarity=0.203 Sum_probs=40.5
Q ss_pred CCHHhHHHh-HhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEEc
Q 033598 11 TSVEEVYPL-VEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 11 t~~~~~~~~-~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~G 88 (115)
|..+.++.. + ..+|++++..-++ .....-+..+++.+++.++.+-- -+.++...+.+.|+|.++.-
T Consensus 59 ~~~~~l~~a~i---~~ad~vi~~~~~~--------~~n~~~~~~a~~~~~~~~iiar~-~~~~~~~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 59 ANEEIMQLAHL---ECAKWLILTIPNG--------YEAGEIVASARAKNPDIEIIARA-HYDDEVAYITERGANQVVMG 125 (140)
T ss_dssp TSHHHHHHTTG---GGCSEEEECCSCH--------HHHHHHHHHHHHHCSSSEEEEEE-SSHHHHHHHHHTTCSEEEEH
T ss_pred CCHHHHHhcCc---ccCCEEEEECCCh--------HHHHHHHHHHHHHCCCCeEEEEE-CCHHHHHHHHHCCCCEEECc
Confidence 444555443 3 5688876532111 12222345566777777766544 47889999999999988753
No 473
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=62.20 E-value=3.2 Score=33.22 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=50.9
Q ss_pred CCCHHhHHHhHhC------CCCCC----EEEEEeeeCCCC--CcccchhHHHHHHHHHhhCCCCc-EEE--Ec--CCChh
Q 033598 10 GTSVEEVYPLVEG------ANPVE----MVLVMTVEPGFG--GQKFMPEMMDKVRSLRNRYPSLD-IEV--DG--GLGPS 72 (115)
Q Consensus 10 ~t~~~~~~~~~~~------~~~vD----~vlvm~v~pG~~--gq~~~~~~~~ki~~l~~~~~~~~-i~~--dG--GI~~~ 72 (115)
-|..+..+.+++. +.++| .+.-+.|.||.. .......-++++++|++...+.| ++. =. |++.+
T Consensus 194 ~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStDy~~~e 273 (450)
T 3txv_A 194 VTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTDYQTPD 273 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCTTCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCCCCCHH
Confidence 3566666666631 12453 333346788843 22112223345666665543445 454 44 67999
Q ss_pred hHHHHHHcCCCEEEEccccc
Q 033598 73 TIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 73 ni~~l~~~Gad~iv~Gsaif 92 (115)
+++.+.+.|...+=+|.+++
T Consensus 274 ~l~~~V~~GiaklNVgp~Lt 293 (450)
T 3txv_A 274 ALRELVADGFAILKVGPGLT 293 (450)
T ss_dssp HHHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHHcCCcEEEEChHHH
Confidence 99999999999999998875
No 474
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=62.06 E-value=44 Score=24.44 Aligned_cols=81 Identities=11% Similarity=0.042 Sum_probs=47.7
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHHHH---HHHhhCCCCcEEEEcCCC-hhhHH---HHHHcCCCEEEEcccccCC-C
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDKVR---SLRNRYPSLDIEVDGGLG-PSTIA---EAASAGANCIVAGSSVFGA-P 95 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~ki~---~l~~~~~~~~i~~dGGI~-~~ni~---~l~~~Gad~iv~Gsaif~~-~ 95 (115)
.++|.+.++ |.+|..+.-..-||.+ ...+...+ -|.=.|+.+ .+.+. ...++|||.+.+..-.|.. +
T Consensus 32 ~Gv~gl~v~----GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~ 106 (288)
T 2nuw_A 32 KGIDAIFVN----GTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRL 106 (288)
T ss_dssp TTCCEEEET----STTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC
Confidence 579998643 7777655433334433 33333334 333344444 33333 3466899999999887766 6
Q ss_pred CHHHHHHHHHHHHH
Q 033598 96 EPAHVISLMRKSVE 109 (115)
Q Consensus 96 d~~~~~~~l~~~~~ 109 (115)
+..+-.+.++++.+
T Consensus 107 s~~~l~~~f~~va~ 120 (288)
T 2nuw_A 107 PEKFLAKYYEEIAR 120 (288)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 76666666665544
No 475
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=61.63 E-value=19 Score=26.78 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=36.1
Q ss_pred HHHHHHHHhhCCC-CcEEEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHHHH
Q 033598 48 MDKVRSLRNRYPS-LDIEVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISLMR 105 (115)
Q Consensus 48 ~~ki~~l~~~~~~-~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~l~ 105 (115)
.+-++++|+..+. .+|++.=- |.+.+.+..++|||++.++. |..++.++..+.++
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~-tleea~eA~~aGaD~I~LDn--~~~e~l~~av~~l~ 235 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE-NLEDALRAVEAGADIVMLDN--LSPEEVKDISRRIK 235 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES-SHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEeC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhh
Confidence 3457777777654 56666533 67888888999999998886 43334444444443
No 476
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=61.51 E-value=10 Score=28.32 Aligned_cols=40 Identities=10% Similarity=0.185 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhCCCCcEEEE---cCCChhhHHHHHHcCCCEEEEc
Q 033598 47 MMDKVRSLRNRYPSLDIEVD---GGLGPSTIAEAASAGANCIVAG 88 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~d---GGI~~~ni~~l~~~Gad~iv~G 88 (115)
.++.++++++ . ++|+.+- +|.+++....+.++|+|.+++.
T Consensus 170 ~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 170 LVERLAELLP-L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp HHHHHHHHCS-C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHHc-C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeC
Confidence 5677888888 4 7888875 3489999999999999999984
No 477
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=61.46 E-value=22 Score=20.85 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=47.2
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEE-cCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVD-GGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~d-GGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.+++-..-|+.. .++.++++++ .++.|+.+. +.-+.+......+.|++.++ .+.-++.+-...
T Consensus 45 ~~dlvi~D~~l~~~~-------g~~~~~~l~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~Kp~~~~~l~~~ 111 (121)
T 1zh2_A 45 KPDLIILDLGLPDGD-------GIEFIRDLRQ-WSAVPVIVLSARSEESDKIAALDAGADDYL-----SKPFGIGELQAR 111 (121)
T ss_dssp CCSEEEEESEETTEE-------HHHHHHHHHT-TCCCCEEEEESCCSHHHHHHHHHHTCSEEE-----ESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCc-------HHHHHHHHHh-CCCCcEEEEECCCCHHHHHHHHhcCCCeEE-----eCCcCHHHHHHH
Confidence 578887765566643 3455666664 456776554 55567777888899998874 344566666666
Q ss_pred HHHHHHH
Q 033598 104 MRKSVED 110 (115)
Q Consensus 104 l~~~~~~ 110 (115)
++..++.
T Consensus 112 i~~~~~~ 118 (121)
T 1zh2_A 112 LRVALRR 118 (121)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665544
No 478
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=61.45 E-value=30 Score=25.83 Aligned_cols=84 Identities=21% Similarity=0.201 Sum_probs=47.4
Q ss_pred CceEEEecCCCCHHhHHHhHhCCCCCCEEEEEee--eCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHH
Q 033598 1 MRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTV--EPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEA 77 (115)
Q Consensus 1 ~k~Glal~p~t~~~~~~~~~~~~~~vD~vlvm~v--~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l 77 (115)
||+.+.-.|+-....++.+++ .+.+.+.|.+- .|...|++..+... ++..+.. ++|+.---.+ +.+.+..+
T Consensus 4 mrIvf~Gt~~fa~~~L~~L~~--~~~~i~~Vvt~pd~p~grg~~~~~~~v---~~~A~~~-gIpv~~~~~~~~~~~~~~l 77 (314)
T 1fmt_A 4 LRIIFAGTPDFAARHLDALLS--SGHNVVGVFTQPDRPAGRGKKLMPSPV---KVLAEEK-GLPVFQPVSLRPQENQQLV 77 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHH--TTCEEEEEECCCCBC------CBCCHH---HHHHHHT-TCCEECCSCSCSHHHHHHH
T ss_pred CEEEEEecCHHHHHHHHHHHH--CCCcEEEEEeCCCCccccccccCcCHH---HHHHHHc-CCcEEecCCCCCHHHHHHH
Confidence 455555555544677888773 25778887775 24334555554443 3333332 5665433344 35667788
Q ss_pred HHcCCCEEEEccc
Q 033598 78 ASAGANCIVAGSS 90 (115)
Q Consensus 78 ~~~Gad~iv~Gsa 90 (115)
.+..+|.+|+-+.
T Consensus 78 ~~~~~Dliv~~~y 90 (314)
T 1fmt_A 78 AELQADVMVVVAY 90 (314)
T ss_dssp HHTTCSEEEEESC
T ss_pred HhcCCCEEEEeec
Confidence 9999999998754
No 479
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.13 E-value=49 Score=24.37 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=48.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhHH---HHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTIA---EAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni~---~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+. ...++|||.+.+..-.|..
T Consensus 45 ~Gv~gl~v~----GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 120 (301)
T 1xky_A 45 NGTTAIVVG----GTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNK 120 (301)
T ss_dssp TTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 579998644 66776553222333 3333333 2346654 345544 33333 3567899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 121 ~s~~~l~~~f~~va~ 135 (301)
T 1xky_A 121 PSQEGMYQHFKAIAE 135 (301)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665543
No 480
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=59.72 E-value=37 Score=23.11 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=46.2
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE-EcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV-DGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHVISL 103 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~-dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~~~ 103 (115)
..|.|++-..-|+.. .++-++++++.. ++|+.+ .+.-+.+......++||+.++. +.-++.+-...
T Consensus 49 ~~dlvilD~~l~~~~-------g~~~~~~lr~~~-~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~-----Kp~~~~~L~~~ 115 (238)
T 2gwr_A 49 RPDLVLLDLMLPGMN-------GIDVCRVLRADS-GVPIVMLTAKTDTVDVVLGLESGADDYIM-----KPFKPKELVAR 115 (238)
T ss_dssp CCSEEEEESSCSSSC-------HHHHHHHHHTTC-CCCEEEEEETTCCSCHHHHHHTTCCEEEE-----ESCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCC-------HHHHHHHHHhCC-CCcEEEEeCCCCHHHHHHHHHCCCCEEEe-----CCCCHHHHHHH
Confidence 578887765556643 345567777654 677655 4555667788889999998754 34466665555
Q ss_pred HHHHH
Q 033598 104 MRKSV 108 (115)
Q Consensus 104 l~~~~ 108 (115)
++..+
T Consensus 116 i~~~~ 120 (238)
T 2gwr_A 116 VRARL 120 (238)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 65544
No 481
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=59.64 E-value=52 Score=24.50 Aligned_cols=82 Identities=20% Similarity=0.349 Sum_probs=44.6
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCChhh----HHHHHHcCCCEEEEccc-ccC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLGPST----IAEAASAGANCIVAGSS-VFG 93 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~~~n----i~~l~~~Gad~iv~Gsa-if~ 93 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+.+. .+...++|||.+.+..- .|+
T Consensus 44 ~Gv~gl~v~----GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 119 (318)
T 3qfe_A 44 SGLTGLVIL----GTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFG 119 (318)
T ss_dssp TTCSEEEES----SGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC--
T ss_pred cCCCEEEeC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccC
Confidence 589998654 66666543223333 3333333 33577654 33333322 33456789999999987 454
Q ss_pred C-CCHHHHHHHHHHHHH
Q 033598 94 A-PEPAHVISLMRKSVE 109 (115)
Q Consensus 94 ~-~d~~~~~~~l~~~~~ 109 (115)
. .+.++..+.++++.+
T Consensus 120 kp~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 120 KATTPPVIKSFFDDVSC 136 (318)
T ss_dssp -CCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 3 355555655665544
No 482
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=59.52 E-value=4.2 Score=29.48 Aligned_cols=85 Identities=16% Similarity=0.136 Sum_probs=46.5
Q ss_pred HHhHHHhHhCCCCCCEEEEEeeeCCCC-CcccchhHHHHHHHHHhhCC-CCcEEEEcCCChhhHHHHHHcCCCEEEEccc
Q 033598 13 VEEVYPLVEGANPVEMVLVMTVEPGFG-GQKFMPEMMDKVRSLRNRYP-SLDIEVDGGLGPSTIAEAASAGANCIVAGSS 90 (115)
Q Consensus 13 ~~~~~~~~~~~~~vD~vlvm~v~pG~~-gq~~~~~~~~ki~~l~~~~~-~~~i~~dGGI~~~ni~~l~~~Gad~iv~Gsa 90 (115)
.+.++.+.+ .++|++-+--.+-.|- .-.|.+ +-++++|+..+ ++++.++-. ..-++.+.++|||++.+=-.
T Consensus 29 ~~~i~~~~~--~gad~lhvDvmDG~fvpn~t~G~---~~v~~lr~~~~~DvhLMv~~p--~~~i~~~~~aGAd~itvH~e 101 (237)
T 3cu2_A 29 NEEVTTLLE--NQINVLHFDIADGQFSSLFTVGA---IGIKYFPTHCFKDVHLMVRNQ--LEVAKAVVANGANLVTLQLE 101 (237)
T ss_dssp HHHHHHHHH--TTCCEEEEEEEBSSSSSCBCBCT---HHHHTSCTTSEEEEEEECSCH--HHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHH--cCCCEEEEEEecCccccchhhhH---HHHHHHhhhCCCCeEEEEECH--HHHHHHHHHcCCCEEEEecC
Confidence 345555541 4689976655442222 122333 34555554321 455555522 45577889999999766532
Q ss_pred ccCCCCHHHHHHHHHH
Q 033598 91 VFGAPEPAHVISLMRK 106 (115)
Q Consensus 91 if~~~d~~~~~~~l~~ 106 (115)
..+++.+.++.+++
T Consensus 102 --a~~~~~~~i~~i~~ 115 (237)
T 3cu2_A 102 --QYHDFALTIEWLAK 115 (237)
T ss_dssp --CTTSHHHHHHHHTT
T ss_pred --CcccHHHHHHHHHh
Confidence 23566666666553
No 483
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=59.40 E-value=53 Score=24.57 Aligned_cols=78 Identities=13% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChh---hHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 25 PVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPS---TIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 25 ~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~---ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
..|.|++-.--|+.+ .++-++++++..+ +|+.+..+-+.+ ...+..+.|++-++.=..-...++..+..
T Consensus 49 ~pDlVllDi~mp~~d-------Glell~~l~~~~p-~pVIvlS~~~~~~~~~~~~al~~Ga~d~l~KP~~~~~~~l~~~~ 120 (349)
T 1a2o_A 49 NPDVLTLDVEMPRMD-------GLDFLEKLMRLRP-MPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYS 120 (349)
T ss_dssp CCSEEEEECCCSSSC-------HHHHHHHHHHSSC-CCEEEEECCTHHHHHHHHHHHHHTCCEEEECSSSSCSSCHHHHH
T ss_pred CCCEEEEECCCCCCC-------HHHHHHHHHhcCC-CcEEEEECCCcccHHHHHHHHhCCceEEEECCCCccchhHHHHH
Confidence 578888765556644 4455777777765 888887776653 46677899999886553210124455555
Q ss_pred HHHHHHHHH
Q 033598 102 SLMRKSVED 110 (115)
Q Consensus 102 ~~l~~~~~~ 110 (115)
.+|.+.++.
T Consensus 121 ~~L~~~I~~ 129 (349)
T 1a2o_A 121 EMIAEKVRT 129 (349)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556655554
No 484
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=59.35 E-value=18 Score=23.21 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=32.8
Q ss_pred CChhhHHHHHHcCCCEEEEcccccC-----------CCCHHHHHHHHHHHHHHHh
Q 033598 69 LGPSTIAEAASAGANCIVAGSSVFG-----------APEPAHVISLMRKSVEDAQ 112 (115)
Q Consensus 69 I~~~ni~~l~~~Gad~iv~Gsaif~-----------~~d~~~~~~~l~~~~~~~~ 112 (115)
++++.+..+.+.++|++++|+.--. .-+-.++++.+..++.|-+
T Consensus 49 l~~~~~~~ll~~~~evlliGTG~~~~~~~~~~~~ve~M~T~aAcrTYNiL~~EgR 103 (113)
T 1ihn_A 49 MAEEELEELLEEKPESIIIGSGVHGALETGFRSDATVLPTCEAIKRYNEERSAGR 103 (113)
T ss_dssp ECTHHHHHHHTTCCSEEEEECCTTCCCEESSCCSCEEECHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcCCCEEEECCCCCccccCChhhEEEEcChHHHHHHHHHHHhCCC
Confidence 5789999999999999999976431 1145788888887766543
No 485
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=59.31 E-value=20 Score=27.69 Aligned_cols=81 Identities=16% Similarity=0.226 Sum_probs=52.2
Q ss_pred CCHHhHHHhHhCCCCCC---EE--EEEeeeCCC-CC-cccchhHHHHHHHH-Hhh-C---CCCcEEEEc--CCChhhHHH
Q 033598 11 TSVEEVYPLVEGANPVE---MV--LVMTVEPGF-GG-QKFMPEMMDKVRSL-RNR-Y---PSLDIEVDG--GLGPSTIAE 76 (115)
Q Consensus 11 t~~~~~~~~~~~~~~vD---~v--lvm~v~pG~-~g-q~~~~~~~~ki~~l-~~~-~---~~~~i~~dG--GI~~~ni~~ 76 (115)
|..+...++.+...++| .+ -+.++|--| .| .+..++.++++++. ++. . .++|++.=| |+..+.+++
T Consensus 197 T~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~~~e~i~~ 276 (358)
T 1dos_A 197 TQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKD 276 (358)
T ss_dssp CCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCCCCCHHHHHH
Confidence 77777777763212566 33 222344335 23 33456666666553 222 1 358999999 899999999
Q ss_pred HHHcCCCEEEEcccc
Q 033598 77 AASAGANCIVAGSSV 91 (115)
Q Consensus 77 l~~~Gad~iv~Gsai 91 (115)
..+.|+.-+=+.+.+
T Consensus 277 ai~~GV~KiNi~Tdl 291 (358)
T 1dos_A 277 SVSYGVVKMNIDTDT 291 (358)
T ss_dssp HHHTTEEEEEECHHH
T ss_pred HHHCCCeEEEEcHHH
Confidence 999999999888765
No 486
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=58.98 E-value=11 Score=29.93 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=51.9
Q ss_pred CCCHHhHHHhHh-------CCCCCCE----EEEEeeeCC-----CCCcccchhHHHHHHHHHhhCCCCcEEEEc--CCCh
Q 033598 10 GTSVEEVYPLVE-------GANPVEM----VLVMTVEPG-----FGGQKFMPEMMDKVRSLRNRYPSLDIEVDG--GLGP 71 (115)
Q Consensus 10 ~t~~~~~~~~~~-------~~~~vD~----vlvm~v~pG-----~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG--GI~~ 71 (115)
-|..+..+.+++ . -++|. +.=+.|-+| |....+..+.++.|++.-.. |++-++.=| |++.
T Consensus 187 ~T~PeeA~~Fve~~~~~~~~-tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~-P~LVle~HGgSg~~~ 264 (420)
T 2fiq_A 187 ITHVEDAANTLRTHQKAFIA-RGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIEN-TRMVYEAHSTDYQTR 264 (420)
T ss_dssp CCCHHHHHHHHHHHHHHHHT-TTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTT-SSCEEEESCCTTCCH
T ss_pred CCCHHHHHHHHHHHHHHHHh-hCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCC-CCEEEecCCCCCCCH
Confidence 477888888886 5 67888 433455555 32234445554445444322 333342244 5899
Q ss_pred hhHHHHHHcCCCEEEEccccc
Q 033598 72 STIAEAASAGANCIVAGSSVF 92 (115)
Q Consensus 72 ~ni~~l~~~Gad~iv~Gsaif 92 (115)
+.++.+.+.|...+=+|+.+.
T Consensus 265 e~l~~~v~~Gi~kiNV~t~l~ 285 (420)
T 2fiq_A 265 TAYWELVRDHFAILKVGPALT 285 (420)
T ss_dssp HHHHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHH
Confidence 999999999999999998764
No 487
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=58.95 E-value=35 Score=24.92 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=38.2
Q ss_pred HHHHHHHHHhhCCCCcEEEEcC-------CChhhHHHHHHcCCCEEEEcccccCCCCHHHHH
Q 033598 47 MMDKVRSLRNRYPSLDIEVDGG-------LGPSTIAEAASAGANCIVAGSSVFGAPEPAHVI 101 (115)
Q Consensus 47 ~~~ki~~l~~~~~~~~i~~dGG-------I~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~~ 101 (115)
....|.++|+.+ + -+.++|| ++...+..+.++|+|.+.+|=-.|...+....+
T Consensus 18 v~~~l~~lr~~~-d-~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~T~GNHefD~~~l~~~l 77 (252)
T 2z06_A 18 VGLHLPDIRDRY-D-LVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALL 77 (252)
T ss_dssp HHHHHHHHGGGC-S-EEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHH
T ss_pred HHHHHHHHHhhC-C-EEEEeCCCccCCCCcCHHHHHHHHhCCCCEEEeccEeeECchHHHHh
Confidence 445577777776 5 3666664 678889999999999999997788665544333
No 488
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=58.95 E-value=27 Score=21.13 Aligned_cols=70 Identities=11% Similarity=0.255 Sum_probs=42.4
Q ss_pred CEEEEEeeeCCCCCcccchhHHHHHHHHHhhCC----CC-cE-EEEcCCChhhHHHHHHcCCCEEEEcccccCCCCHHHH
Q 033598 27 EMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYP----SL-DI-EVDGGLGPSTIAEAASAGANCIVAGSSVFGAPEPAHV 100 (115)
Q Consensus 27 D~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~----~~-~i-~~dGGI~~~ni~~l~~~Gad~iv~Gsaif~~~d~~~~ 100 (115)
|.|++-..-|+..|.. . ++++++..+ .. ++ .+.+.-+.+......++|++.++ .+.-++.+-
T Consensus 52 dlvllD~~lp~~~g~~----~---~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L 119 (136)
T 1dcf_A 52 KVVFMDVCMPGVENYQ----I---ALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVL-----LKPVSLDNI 119 (136)
T ss_dssp SEEEEECCSSTTTTTH----H---HHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEE-----ESSCCHHHH
T ss_pred CEEEEeCCCCCCcHHH----H---HHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCeEE-----ECCCCHHHH
Confidence 8887766667766533 2 344442211 23 44 46666778888888999999774 344466655
Q ss_pred HHHHHHHH
Q 033598 101 ISLMRKSV 108 (115)
Q Consensus 101 ~~~l~~~~ 108 (115)
...++..+
T Consensus 120 ~~~l~~~~ 127 (136)
T 1dcf_A 120 RDVLSDLL 127 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555544
No 489
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=58.74 E-value=52 Score=24.27 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=47.8
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+ +...++|||.+.+..-.|..
T Consensus 45 ~Gv~gl~v~----GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 120 (306)
T 1o5k_A 45 NGVNALIVL----GTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNK 120 (306)
T ss_dssp TTCCEEEES----SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cCCCEEEeC----ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 579998654 66666543222233 3333333 2346654 345544 3333 33467899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 121 ~s~~~l~~~f~~va~ 135 (306)
T 1o5k_A 121 PTQEGLYQHYKYISE 135 (306)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665543
No 490
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=58.61 E-value=35 Score=25.08 Aligned_cols=66 Identities=11% Similarity=0.049 Sum_probs=38.6
Q ss_pred CHHhHHHhHhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEc---CC---ChhhHHHHHHcCCCEE
Q 033598 12 SVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDG---GL---GPSTIAEAASAGANCI 85 (115)
Q Consensus 12 ~~~~~~~~~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dG---GI---~~~ni~~l~~~Gad~i 85 (115)
..+++++++ ...|.++ ++||.......+.....++.+++. +.|+++|- |. +.+.+..+++..++++
T Consensus 48 ~~~e~~e~~---~~a~alv---In~G~l~~~~~~~~~~a~~~a~~~--~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VI 119 (273)
T 3dzv_A 48 DPREFPQMF---QQTSALV---LNLGHLSQEREQSLLAASDYARQV--NKLTVVDLVGYGASDIRNEVGEKLVHNQPTVV 119 (273)
T ss_dssp CGGGHHHHH---TTCSEEE---EECCSCCHHHHHHHHHHHHHHHHT--TCCEEEECTTTTSCHHHHHHHHHHHHTCCSEE
T ss_pred CHHHHHHHH---HHCCeEE---EecCCCChHHHHHHHHHHHHHHHc--CCcEEEchhhcCCcccCHHHHHHHHhcCCcEE
Confidence 356778888 7788876 789975443333343444444443 58899994 22 2344455555555543
No 491
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=58.53 E-value=51 Score=24.10 Aligned_cols=82 Identities=15% Similarity=0.232 Sum_probs=48.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhHH---HHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTIA---EAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni~---~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+. ...++|||.+.+..-.|..
T Consensus 33 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 108 (294)
T 2ehh_A 33 NGTDAILVC----GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNK 108 (294)
T ss_dssp TTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred CCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 579998654 66666543222233 3333333 2346654 345544 33333 3467899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 109 ~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 109 PTQRGLYEHFKTVAQ 123 (294)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 777666666665544
No 492
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=58.45 E-value=22 Score=27.48 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=46.0
Q ss_pred CCCCHHhHHHh-HhCCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEEEcCCChhhHHHHHHcCCCEEEE
Q 033598 9 PGTSVEEVYPL-VEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEVDGGLGPSTIAEAASAGANCIVA 87 (115)
Q Consensus 9 p~t~~~~~~~~-~~~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~dGGI~~~ni~~l~~~Gad~iv~ 87 (115)
-.|..+.++.. + ..+|.|++..-+ ....+.-+..+++.+|+++|.+--- +.++...|.++|||.++.
T Consensus 54 Dat~~~~L~~agi---~~A~~viv~~~~--------~~~n~~i~~~ar~~~p~~~Iiara~-~~~~~~~L~~~Gad~Vi~ 121 (413)
T 3l9w_A 54 DATRMDLLESAGA---AKAEVLINAIDD--------PQTNLQLTEMVKEHFPHLQIIARAR-DVDHYIRLRQAGVEKPER 121 (413)
T ss_dssp CTTCHHHHHHTTT---TTCSEEEECCSS--------HHHHHHHHHHHHHHCTTCEEEEEES-SHHHHHHHHHTTCSSCEE
T ss_pred CCCCHHHHHhcCC---CccCEEEECCCC--------hHHHHHHHHHHHHhCCCCeEEEEEC-CHHHHHHHHHCCCCEEEC
Confidence 34556666654 4 678988754321 1334445666777888887777554 789999999999999874
No 493
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.30 E-value=53 Score=24.20 Aligned_cols=83 Identities=12% Similarity=0.190 Sum_probs=49.0
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEEE-EcCCC-hhhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIEV-DGGLG-PSTI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~~-dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+.+ .|+.+ .+.+ +...++|||.+.+..-.|..
T Consensus 44 ~Gv~Gl~v~----GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 119 (303)
T 2wkj_A 44 QGIDGLYVG----GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYP 119 (303)
T ss_dssp TTCSEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cCCCEEEEC----eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCC
Confidence 579998654 76776553222233 3333333 23566553 44434 3333 33467899999999887766
Q ss_pred CCHHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVED 110 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~~ 110 (115)
++..+..+.++++.+.
T Consensus 120 ~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 120 FSFEEHCDHYRAIIDS 135 (303)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 7766666666665543
No 494
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=58.08 E-value=14 Score=27.68 Aligned_cols=47 Identities=11% Similarity=0.287 Sum_probs=33.3
Q ss_pred cccchhHHHHHHHHHhhCCCCcEEEEcCC-ChhhHHHHHHcC-CCEEEEc
Q 033598 41 QKFMPEMMDKVRSLRNRYPSLDIEVDGGL-GPSTIAEAASAG-ANCIVAG 88 (115)
Q Consensus 41 q~~~~~~~~ki~~l~~~~~~~~i~~dGGI-~~~ni~~l~~~G-ad~iv~G 88 (115)
|++.++.++.++++++.. ++||.+|+.+ +.+.+.++++.| +|++.+.
T Consensus 222 ~P~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 222 EPTLQHDYEGHQRIQSKL-NVPVQMGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp CCSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred CCCChhhHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 444455566677777653 6999999998 567788776665 7887664
No 495
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=58.01 E-value=54 Score=24.18 Aligned_cols=82 Identities=15% Similarity=0.258 Sum_probs=48.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhHH---HHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTIA---EAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni~---~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.+. |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+. ...++|||.+.+..-.|..
T Consensus 49 ~Gv~gl~v~----GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 124 (304)
T 3cpr_A 49 KGLDSLVLA----GTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSK 124 (304)
T ss_dssp TTCCEEEES----STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred cCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 579998643 66666543222233 3333333 2346654 345544 33333 3467899999999887776
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 125 ~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 125 PSQEGLLAHFGAIAA 139 (304)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 496
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=57.83 E-value=27 Score=25.45 Aligned_cols=74 Identities=14% Similarity=0.078 Sum_probs=50.3
Q ss_pred CCCHHhHHHhHh---CCCCCCEEEEEeeeCCCCCcccchhHHHHHHHHHhhCCCCcEEE----EcCCChhhHHHHHHcCC
Q 033598 10 GTSVEEVYPLVE---GANPVEMVLVMTVEPGFGGQKFMPEMMDKVRSLRNRYPSLDIEV----DGGLGPSTIAEAASAGA 82 (115)
Q Consensus 10 ~t~~~~~~~~~~---~~~~vD~vlvm~v~pG~~gq~~~~~~~~ki~~l~~~~~~~~i~~----dGGI~~~ni~~l~~~Ga 82 (115)
.|+.+.+.++++ + .++|.|-+-- ..|........+.++++++..+++|+.+ +-|+...|.....++|+
T Consensus 151 ~~~~~~~~~~~~~~~~-~G~d~i~l~D----t~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~ 225 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFS-LGCHEVSLGD----TIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGL 225 (295)
T ss_dssp ECCHHHHHHHHHHHHH-HTCSEEEEEE----TTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHh-cCCCEEEecC----CCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCC
Confidence 356666666654 2 3788876542 2333334456677888888765566665 56888999999999999
Q ss_pred CEEEEc
Q 033598 83 NCIVAG 88 (115)
Q Consensus 83 d~iv~G 88 (115)
+.+=..
T Consensus 226 ~~vd~s 231 (295)
T 1ydn_A 226 RVFDAS 231 (295)
T ss_dssp CEEEEB
T ss_pred CEEEec
Confidence 987653
No 497
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=57.76 E-value=53 Score=24.00 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=47.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhHHH---HHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTIAE---AASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni~~---l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+.. ..++|||.+.+..-.|..
T Consensus 34 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 109 (292)
T 2ojp_A 34 SGTSAIVSV----GTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNR 109 (292)
T ss_dssp HTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSC
T ss_pred cCCCEEEEC----ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 478988644 66666543222233 3333333 2346654 345544 344433 356799999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++..+..+.++++.+
T Consensus 110 ~s~~~l~~~f~~ia~ 124 (292)
T 2ojp_A 110 PSQEGLYQHFKAIAE 124 (292)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665543
No 498
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=57.47 E-value=53 Score=23.98 Aligned_cols=82 Identities=16% Similarity=0.232 Sum_probs=47.3
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+ +...++|||.+.+..-.|..
T Consensus 37 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 112 (293)
T 1f6k_A 37 MKVDGLYVG----GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYK 112 (293)
T ss_dssp SCCSEEEES----SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred CCCcEEEeC----ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 378888654 66666543222233 3333333 2346644 345544 3333 33466899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 113 ~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 113 FSFPEIKHYYDTIIA 127 (293)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 499
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=57.42 E-value=53 Score=23.95 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=48.5
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhh-CCCCcEE-EEcCCC-hhhH---HHHHHcCCCEEEEcccccCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNR-YPSLDIE-VDGGLG-PSTI---AEAASAGANCIVAGSSVFGA 94 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~-~~~~~i~-~dGGI~-~~ni---~~l~~~Gad~iv~Gsaif~~ 94 (115)
.++|.+.++ |.+|..+.-..-|| ++...+. ...+|+. =.|+.+ .+.+ +...++|||.+.+..-.|..
T Consensus 33 ~Gv~gl~~~----GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 108 (289)
T 2yxg_A 33 NGVSGIVAV----GTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNK 108 (289)
T ss_dssp TTCSEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred CCCCEEEEC----ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 579998653 66776553222233 3333333 2346654 345544 3333 33467899999999887766
Q ss_pred CCHHHHHHHHHHHHH
Q 033598 95 PEPAHVISLMRKSVE 109 (115)
Q Consensus 95 ~d~~~~~~~l~~~~~ 109 (115)
++.++..+.++++.+
T Consensus 109 ~s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 109 PTQEGLRKHFGKVAE 123 (289)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 776666666665544
No 500
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.38 E-value=56 Score=24.19 Aligned_cols=82 Identities=17% Similarity=0.165 Sum_probs=46.1
Q ss_pred CCCCEEEEEeeeCCCCCcccchhHHHH---HHHHHhhCCCCcEEE-EcCCCh-hh---HHHHHHcCCCEEEEcccccCCC
Q 033598 24 NPVEMVLVMTVEPGFGGQKFMPEMMDK---VRSLRNRYPSLDIEV-DGGLGP-ST---IAEAASAGANCIVAGSSVFGAP 95 (115)
Q Consensus 24 ~~vD~vlvm~v~pG~~gq~~~~~~~~k---i~~l~~~~~~~~i~~-dGGI~~-~n---i~~l~~~Gad~iv~Gsaif~~~ 95 (115)
.++|.+.++ |.+|..+.-..-|| ++...+....+|+.+ .|+.+. +. .+...++|||.+.+..-.|. +
T Consensus 41 ~Gv~Gl~v~----GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~-~ 115 (313)
T 3dz1_A 41 VGCEGVTVL----GILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSL-R 115 (313)
T ss_dssp TTCSEEEES----TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTC-C
T ss_pred CCCCEEEeC----ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC-C
Confidence 589998654 66776543222233 333344443466554 232232 22 23456789999999866654 5
Q ss_pred CHHHHHHHHHHHHHH
Q 033598 96 EPAHVISLMRKSVED 110 (115)
Q Consensus 96 d~~~~~~~l~~~~~~ 110 (115)
+.++..+.++++.+.
T Consensus 116 s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 116 TDEQITTYFRQATEA 130 (313)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 656666556655443
Done!