BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033599
MAMVTSNMGAYQKTQMLKVVCRKKERDRDHKNNIHPYKVVEITPPPKCLGIRCFPPNLQC
GESVTIEGQAYTISAVTHRYQLRKGKYEPSEKRLDVLSSSRYILNLYLENLLEQS

High Scoring Gene Products

Symbol, full name Information P value
AT5G40500 protein from Arabidopsis thaliana 2.0e-31

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033599
        (115 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2168723 - symbol:AT5G40500 "AT5G40500" species...   345  2.0e-31   1


>TAIR|locus:2168723 [details] [associations]
            symbol:AT5G40500 "AT5G40500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AY065309 EMBL:AY117310 IPI:IPI00529647 RefSeq:NP_198866.2
            UniGene:At.28461 STRING:Q8VZ30 EnsemblPlants:AT5G40500.1
            GeneID:834048 KEGG:ath:AT5G40500 TAIR:At5g40500
            HOGENOM:HOG000012836 InParanoid:Q8VZ30 OMA:AVTHRYQ PhylomeDB:Q8VZ30
            ProtClustDB:CLSN2690216 ArrayExpress:Q8VZ30 Genevestigator:Q8VZ30
            Uniprot:Q8VZ30
        Length = 123

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 71/111 (63%), Positives = 82/111 (73%)

Query:     1 MAMVTSNMGAYQKTQM----------LKVVCRKKERDRDHKNNIHPYKVVEITPPPKCLG 50
             MA V SN+    K  M          L++ CRKKE+ RD  +  +PYKV+EITPPPK LG
Sbjct:     1 MATVASNLACIGKVTMSRASSMVGWRLQINCRKKEKGRDQSH--YPYKVIEITPPPKSLG 58

Query:    51 IRCFPPNLQCGESVTIEGQAYTISAVTHRYQLRKGKYEPSEKRLDVLSSSR 101
             IRC P NLQCGE+V IEGQ YTISAVTHRYQLRKGKYEPSE+RLDVLS++R
Sbjct:    59 IRCLPHNLQCGENVMIEGQTYTISAVTHRYQLRKGKYEPSERRLDVLSAAR 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       103   0.00091  102 3  11 22  0.42    30
                                                     29  0.49    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  540 (57 KB)
  Total size of DFA:  116 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.78u 0.14s 11.92t   Elapsed:  00:00:01
  Total cpu time:  11.78u 0.14s 11.92t   Elapsed:  00:00:01
  Start:  Tue May 21 00:07:12 2013   End:  Tue May 21 00:07:13 2013

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