Query 033603
Match_columns 115
No_of_seqs 156 out of 883
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 06:22:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033603.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033603hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 3.9E-34 1.3E-38 185.9 -0.6 92 23-115 1-92 (93)
2 1afh_A Maize nonspecific lipid 100.0 1.7E-33 5.8E-38 182.9 0.4 93 23-115 1-93 (93)
3 1t12_A LTP 1, nonspecific lipi 100.0 3.2E-33 1.1E-37 181.0 -0.2 91 23-115 1-91 (91)
4 1siy_A LTP 1, NS-LTP1, nonspec 100.0 1.2E-32 4.2E-37 178.2 1.1 91 24-115 1-91 (91)
5 1bwo_A NS-LTP1, nonspecific li 100.0 5.1E-33 1.7E-37 179.7 -0.8 90 24-114 1-90 (90)
6 2alg_A Non-specific lipid tran 100.0 2.2E-32 7.5E-37 177.3 -1.4 92 23-115 1-92 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.6 2.3E-17 7.8E-22 103.2 -1.0 71 23-104 2-76 (77)
8 1n89_A Lipid transfer protein; 99.5 4.3E-16 1.5E-20 95.1 -0.8 58 32-102 6-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.5 6.5E-16 2.2E-20 94.8 -2.4 63 25-102 2-66 (69)
10 3ob4_A Conglutin, maltose ABC 91.1 0.011 3.7E-07 46.8 -3.3 51 49-107 429-492 (500)
11 1hyp_A Hydrophobic protein fro 87.1 0.13 4.6E-06 31.7 0.2 72 24-112 6-78 (80)
12 2lvf_A 2S albumin; allergen, c 35.7 24 0.00083 22.6 2.4 59 32-100 17-101 (114)
13 2ds2_B Sweet protein mabinlin- 32.7 22 0.00076 20.9 1.7 43 49-101 8-63 (72)
14 1psy_A 2S albumin, RICC3; albu 30.2 31 0.0011 22.5 2.2 70 25-104 17-121 (125)
15 2e2s_A Agelenin; cystine knot, 26.1 15 0.0005 18.8 0.1 9 48-56 15-23 (36)
16 1pnb_B Napin BNIB; napin IA an 25.5 17 0.00057 21.5 0.2 46 47-102 10-67 (75)
17 4gyx_A Type III collagen fragm 24.9 30 0.001 16.7 1.1 10 46-55 22-31 (31)
18 1hss_A 0.19 alpha-amylase inhi 20.4 26 0.00089 23.0 0.4 62 31-102 15-104 (124)
19 1ag7_A Conotoxin GS; neurotoxi 20.1 38 0.0013 16.7 0.9 12 46-57 8-19 (34)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.97 E-value=3.9e-34 Score=185.94 Aligned_cols=92 Identities=59% Similarity=1.068 Sum_probs=86.9
Q ss_pred CCCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 23 ~~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
+++|+++...|.||++|++|++ .|++.||+|+++|++.++|+.|||.+|+|+|+.+..+++||.++|.+||++||+++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 4789999999999999999876 699999999999999999999999999999988777778999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 033603 103 YKISPNTDCSRVR 115 (115)
Q Consensus 103 ~~i~~~~dC~~i~ 115 (115)
||||+++||++|+
T Consensus 80 ~~Is~~~dC~~v~ 92 (93)
T 2ljo_A 80 YKISTTTNCNTVK 92 (93)
T ss_dssp SCCSTTCCGGGCC
T ss_pred CCCCCCCCCCCCC
Confidence 9999999999996
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.97 E-value=1.7e-33 Score=182.89 Aligned_cols=93 Identities=61% Similarity=1.096 Sum_probs=87.0
Q ss_pred CCCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 23 ~~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
+++|+++...|.||++|++|++..|+++||++||++++.++|++|||..|+|++....++++||.++|.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 46899999999999999999876788899999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 033603 103 YKISPNTDCSRVR 115 (115)
Q Consensus 103 ~~i~~~~dC~~i~ 115 (115)
|||+++|||++|+
T Consensus 81 ~~is~~~dC~~v~ 93 (93)
T 1afh_A 81 YTISTSTDCSRVN 93 (93)
T ss_dssp SCCSTTCCSSSCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999996
No 3
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.97 E-value=3.2e-33 Score=180.99 Aligned_cols=91 Identities=64% Similarity=1.120 Sum_probs=85.3
Q ss_pred CCCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 23 ~~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
+++|+++...|.||++|++|++. |+ +||++||+|++.|+|++|||..|+|+++.+..+++||.++|.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCC
Confidence 46899999999999999999886 88 99999999999999999999999999877677778999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 033603 103 YKISPNTDCSRVR 115 (115)
Q Consensus 103 ~~i~~~~dC~~i~ 115 (115)
|||+++|||++|+
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1t12_A 79 YKISPSTDCSKVQ 91 (91)
T ss_dssp SCSSSSSCCTTCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999996
No 4
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.97 E-value=1.2e-32 Score=178.21 Aligned_cols=91 Identities=54% Similarity=1.085 Sum_probs=85.3
Q ss_pred CCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCCC
Q 033603 24 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY 103 (115)
Q Consensus 24 ~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (115)
++|+++...|.||++|++++++ |+++||+++|+|++.|+|+.|||..|+|+++.+.++++||.++|.+||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~ 79 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPY 79 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSS
T ss_pred CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999999875 999999999999999999999999999998777777679999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 033603 104 KISPNTDCSRVR 115 (115)
Q Consensus 104 ~i~~~~dC~~i~ 115 (115)
||++++||++|+
T Consensus 80 ~is~~~dC~~v~ 91 (91)
T 1siy_A 80 KISTSTNCNSIN 91 (91)
T ss_dssp CSCTTSCSSTTC
T ss_pred CCCCCCCCccCC
Confidence 999999999986
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.97 E-value=5.1e-33 Score=179.70 Aligned_cols=90 Identities=47% Similarity=0.992 Sum_probs=84.6
Q ss_pred CCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCCC
Q 033603 24 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY 103 (115)
Q Consensus 24 ~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (115)
++|+++...|.||++|++|++. |+++||+++|+|++.|+|++|||..|+|+++.+.++++||.++|.+||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY 79 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSS
T ss_pred CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999999875 999999999999999999999999999998877777789999999999999999999
Q ss_pred CCCCCCCCCCC
Q 033603 104 KISPNTDCSRV 114 (115)
Q Consensus 104 ~i~~~~dC~~i 114 (115)
||++++||++|
T Consensus 80 ~is~~~dC~~v 90 (90)
T 1bwo_A 80 TISLNIDCSRV 90 (90)
T ss_dssp CCCTTCCGGGC
T ss_pred CCCCCCCCCCC
Confidence 99999999987
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.96 E-value=2.2e-32 Score=177.32 Aligned_cols=92 Identities=66% Similarity=1.223 Sum_probs=85.4
Q ss_pred CCCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 23 ~~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
+++|+++...|.||++|++|++ .|+++||++||+|++.|+|+.|||..|+|++.....+++||.++|.+||++||+++|
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCC
Confidence 3689999999999999999887 589999999999999999999999999999876666768999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 033603 103 YKISPNTDCSRVR 115 (115)
Q Consensus 103 ~~i~~~~dC~~i~ 115 (115)
|||++++||++|+
T Consensus 80 ~~is~~~dC~~v~ 92 (92)
T 2alg_A 80 YKISASTNCATVK 92 (92)
T ss_dssp SCSSTTSCGGGCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999986
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.61 E-value=2.3e-17 Score=103.18 Aligned_cols=71 Identities=28% Similarity=0.626 Sum_probs=59.0
Q ss_pred CCCccccccCccccHHHHhcC-CCCCCcccccchhhhhcccCCCcCCcccceeeccc---cccCCCCCHHHHhhchhhcC
Q 033603 23 AITCGQVTGSLAPCIAFLRTG-GRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQA---YRSIPGINANVAAGLPRQCG 98 (115)
Q Consensus 23 ~~~C~~~~~~L~pCl~yl~g~-~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~---~~~~~~in~~~a~~LP~~Cg 98 (115)
..+|+++...|.||++|++++ ...||++||++||+ .| ..|+|.+.. +.++ +||.++|.+||++||
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~--------~~--~~ClC~~~~~~~~~~~-gin~~~A~~LP~~Cg 70 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH--------AD--FACLCGYKNSPWLGSF-GVDPELASALPKQCG 70 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT--------CC--HHHHHTTTTCHHHHHH-TBCHHHHHHHHHHTT
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh--------cC--cCCcCcccCCcchhhc-CcCHHHHHHHHHHcC
Confidence 357999999999999999984 45799999999997 13 379997544 4556 699999999999999
Q ss_pred CCCCCC
Q 033603 99 VSIPYK 104 (115)
Q Consensus 99 v~~p~~ 104 (115)
+++||.
T Consensus 71 v~~p~~ 76 (77)
T 2rkn_A 71 LANAPT 76 (77)
T ss_dssp CSCCCC
T ss_pred CCCCCC
Confidence 999873
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.53 E-value=4.3e-16 Score=95.11 Aligned_cols=58 Identities=29% Similarity=0.615 Sum_probs=48.5
Q ss_pred CccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCccccee--eccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 32 SLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC--LKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 32 ~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
.|.||++|++++. .||++||++||+ |..|+| +++..... +||.++|.+||++||+++|
T Consensus 6 ~L~pC~~~v~~~~-~Ps~~CC~~lk~-----------~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 6 QLAVCASAILSGA-KPSGECCGNLRA-----------QQGCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp TTHHHHHHHTTCC-CCCHHHHHHHHH-----------HSSHHHHGGGCSTTHH-HHTCHHHHHHHHHHTSCCS
T ss_pred hcccCHHHHcCCC-CCCHHHHHhhCC-----------CCCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 7899999999876 699999999997 357999 55543222 5899999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.49 E-value=6.5e-16 Score=94.81 Aligned_cols=63 Identities=27% Similarity=0.616 Sum_probs=51.0
Q ss_pred CccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCccccee--eccccccCCCCCHHHHhhchhhcCCCCC
Q 033603 25 TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC--LKQAYRSIPGINANVAAGLPRQCGVSIP 102 (115)
Q Consensus 25 ~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (115)
+|+.. .|.||++|++++. .||++||++||+ |..|+| +++..... +||.++|.+||++||+++|
T Consensus 2 ~C~~~--~L~pC~~~v~~~~-~Ps~~CC~~lk~-----------~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 2 GCNAG--QLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp CSTTT--THHHHHHHHTTCC-STTHHHHHHHHH-----------HHHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSCSC
T ss_pred CCChh--hcccCHHHHcCCC-CCCHHHHHhhCC-----------CCCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 45544 7999999999876 699999999997 356999 56543322 5999999999999999876
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=91.12 E-value=0.011 Score=46.78 Aligned_cols=51 Identities=25% Similarity=0.591 Sum_probs=31.3
Q ss_pred cccccchhhhhcccCCCcCCccccee--ecccccc-----CC----CCCHHHHhhchhhcCCCCC--CCCCC
Q 033603 49 PPCCNGVRSLNGAARTTPDRQAACNC--LKQAYRS-----IP----GINANVAAGLPRQCGVSIP--YKISP 107 (115)
Q Consensus 49 ~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~~~-----~~----~in~~~a~~LP~~Cgv~~p--~~i~~ 107 (115)
.+||+.|+.+.+ ++-|+| ++..... .. ..-..+|..||..||+..| .+|+.
T Consensus 429 ~~cc~~l~~~~~--------~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFEN--------NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGTT--------CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCCCC-
T ss_pred HHHHHHHHhCCc--------ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCCccC
Confidence 579999998742 135888 4332210 00 0113559999999999976 55554
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=87.10 E-value=0.13 Score=31.68 Aligned_cols=72 Identities=25% Similarity=0.521 Sum_probs=47.3
Q ss_pred CCccccccCccccHHHHhcCCCCCCcccccchhhhhcccCCCcCCcccceeeccccccCCCCCHHHHhh-chhhcCCCCC
Q 033603 24 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAG-LPRQCGVSIP 102 (115)
Q Consensus 24 ~~C~~~~~~L~pCl~yl~g~~~~Ps~~CC~~v~~l~~~a~t~~dr~~~C~C~~~~~~~~~~in~~~a~~-LP~~Cgv~~p 102 (115)
.+|- .|.-|.+-+.|.. .|..+||+-++.|.+. | -++|+|-.--+-++ +|.+...+ |-..||...|
T Consensus 6 ~~CP----kLgvCanvL~g~~-~~~~~CC~Ll~GL~dl-----e-AAvCLCtaik~Lgi--lnlpv~L~llln~Cgk~~P 72 (80)
T 1hyp_A 6 PSCP----DLSICLNILGGSL-GTVDDCCALIGGLGDI-----E-AIVCLCIQLRALGI--LNLNRNLQLILNSCGRSYP 72 (80)
T ss_dssp CCSC----CCGGGGGGGGTCC-TTHHHHHHHHHTSCHH-----H-HHHHHHHHHHHHTC--SCHHHHHHHHHHHTTCSSC
T ss_pred CCCC----chhHHHHHhCcCC-CCCCccchhhhCcchh-----h-hhhhhhhhccccce--eecChhHHHHHHHhCCcCc
Confidence 4566 5788988885433 3667899999998653 1 36799931112223 46665555 5578999987
Q ss_pred CCCCCCCCCC
Q 033603 103 YKISPNTDCS 112 (115)
Q Consensus 103 ~~i~~~~dC~ 112 (115)
+.|.|.
T Consensus 73 ----~gF~C~ 78 (80)
T 1hyp_A 73 ----SNATCP 78 (80)
T ss_dssp ----CCCCCS
T ss_pred ----CCCCCC
Confidence 667775
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=35.70 E-value=24 Score=22.56 Aligned_cols=59 Identities=25% Similarity=0.712 Sum_probs=36.8
Q ss_pred CccccHHHHhc----CCC--CCC-------cccccchhhhhcccCCCcCCccccee--eccccc-------cCCCCC---
Q 033603 32 SLAPCIAFLRT----GGR--FPP-------PPCCNGVRSLNGAARTTPDRQAACNC--LKQAYR-------SIPGIN--- 86 (115)
Q Consensus 32 ~L~pCl~yl~g----~~~--~Ps-------~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~~-------~~~~in--- 86 (115)
.|..|..||.- +.. .+. ..||+-|+.+.. -|.| |+..+. .+.+-.
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~----------~CrC~aL~~~v~~~~qq~~~~~~~~~~~ 86 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDE----------SCRCEGLRMMMRMMQQKEMQPRGEQMRR 86 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCH----------HHHHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCc----------CccCHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 47899999862 211 111 249999999753 4888 443221 111111
Q ss_pred -HHHHhhchhhcCCC
Q 033603 87 -ANVAAGLPRQCGVS 100 (115)
Q Consensus 87 -~~~a~~LP~~Cgv~ 100 (115)
..+|..||..||+.
T Consensus 87 ~~q~A~~LP~~C~i~ 101 (114)
T 2lvf_A 87 MMRLAENIPSRCNLS 101 (114)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHhChHhcCCC
Confidence 45799999999997
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=32.67 E-value=22 Score=20.89 Aligned_cols=43 Identities=30% Similarity=0.618 Sum_probs=27.8
Q ss_pred cccccchhhhhcccCCCcCCccccee--eccccc------c-CC----CCCHHHHhhchhhcCCCC
Q 033603 49 PPCCNGVRSLNGAARTTPDRQAACNC--LKQAYR------S-IP----GINANVAAGLPRQCGVSI 101 (115)
Q Consensus 49 ~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~~------~-~~----~in~~~a~~LP~~Cgv~~ 101 (115)
..||+-++.+.. -|.| ++..+. . +. .=...+|..||..||+..
T Consensus 8 qqCC~eL~~~~~----------~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~ 63 (72)
T 2ds2_B 8 RQCCNQLRQVDR----------PCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN 63 (72)
T ss_dssp HHHHHHHTTSCG----------GGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhcCc----------cccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC
Confidence 569999998643 4888 443321 1 11 012567899999999973
No 14
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=30.18 E-value=31 Score=22.45 Aligned_cols=70 Identities=29% Similarity=0.617 Sum_probs=42.6
Q ss_pred Cccccc--cCccccHHHHhcC---CC-------CC-----------CcccccchhhhhcccCCCcCCccccee--ecccc
Q 033603 25 TCGQVT--GSLAPCIAFLRTG---GR-------FP-----------PPPCCNGVRSLNGAARTTPDRQAACNC--LKQAY 79 (115)
Q Consensus 25 ~C~~~~--~~L~pCl~yl~g~---~~-------~P-----------s~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~ 79 (115)
.|-.-+ ..|.+|-.|+.-. .. .| -..||.-|+.+. .-|.| |+..+
T Consensus 17 ~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~----------~~C~C~aL~~~v 86 (125)
T 1psy_A 17 QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR----------DECQCEAIKYIA 86 (125)
T ss_dssp SHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCC----------SSHHHHHHHHHH
T ss_pred ccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcC----------cccccHHHHHHH
Confidence 465433 4699999999742 10 12 146999999864 24888 54333
Q ss_pred c------cCCC--C--CHHHHhhchhhcCCCCCCC
Q 033603 80 R------SIPG--I--NANVAAGLPRQCGVSIPYK 104 (115)
Q Consensus 80 ~------~~~~--i--n~~~a~~LP~~Cgv~~p~~ 104 (115)
. .+.+ + -..+|..||..||+.-+|+
T Consensus 87 ~~~~qQgq~~gqq~~~~~q~A~~LP~~C~i~C~~~ 121 (125)
T 1psy_A 87 EDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQ 121 (125)
T ss_dssp HHHHHHTTCCTTCSHHHHHHHHHHHHHHTCSTTTS
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhhHHHcCCcCCCC
Confidence 1 1111 1 1466889999999943443
No 15
>2e2s_A Agelenin; cystine knot, presynaptic calcium channel inhibitor, toxin; NMR {Allagelena opulenta}
Probab=26.14 E-value=15 Score=18.77 Aligned_cols=9 Identities=44% Similarity=1.483 Sum_probs=6.9
Q ss_pred Ccccccchh
Q 033603 48 PPPCCNGVR 56 (115)
Q Consensus 48 s~~CC~~v~ 56 (115)
.+.||+|++
T Consensus 15 GPrCCsgl~ 23 (36)
T 2e2s_A 15 GPRCCSGLK 23 (36)
T ss_dssp SCCBCTTCC
T ss_pred CCcccCCCc
Confidence 357999986
No 16
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=25.54 E-value=17 Score=21.54 Aligned_cols=46 Identities=28% Similarity=0.488 Sum_probs=29.6
Q ss_pred CCcccccchhhhhcccCCCcCCccccee--ecccc------ccCCCC----CHHHHhhchhhcCCCCC
Q 033603 47 PPPPCCNGVRSLNGAARTTPDRQAACNC--LKQAY------RSIPGI----NANVAAGLPRQCGVSIP 102 (115)
Q Consensus 47 Ps~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~------~~~~~i----n~~~a~~LP~~Cgv~~p 102 (115)
.-..||+-++.+.. -|.| ++..+ ..+++= ...+|..||..||+..+
T Consensus 10 ~~qqCC~qL~~~~~----------~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 10 LREQCCNELYQEDQ----------VCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp CTHHHHHHHHTSCG----------GGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHHHhCCc----------ccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 44689999998753 4888 43322 113211 24567889999999744
No 17
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=24.92 E-value=30 Score=16.73 Aligned_cols=10 Identities=70% Similarity=1.643 Sum_probs=5.3
Q ss_pred CCCcccccch
Q 033603 46 FPPPPCCNGV 55 (115)
Q Consensus 46 ~Ps~~CC~~v 55 (115)
.|+..||.++
T Consensus 22 gppgpccggv 31 (31)
T 4gyx_A 22 GPPGPCCGGV 31 (31)
T ss_dssp CCCCCCC---
T ss_pred CCCCCCccCC
Confidence 4667899875
No 18
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=20.43 E-value=26 Score=22.98 Aligned_cols=62 Identities=24% Similarity=0.546 Sum_probs=38.3
Q ss_pred cCccccHHHHhcC---CCCC---CcccccchhhhhcccCCCcCCccccee--ecccc----------------ccCCC--
Q 033603 31 GSLAPCIAFLRTG---GRFP---PPPCCNGVRSLNGAARTTPDRQAACNC--LKQAY----------------RSIPG-- 84 (115)
Q Consensus 31 ~~L~pCl~yl~g~---~~~P---s~~CC~~v~~l~~~a~t~~dr~~~C~C--~~~~~----------------~~~~~-- 84 (115)
..|..|..||... ...| ...||+.|+.+.. -|.| |.... ..+|+
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~----------~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCr 84 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISE----------WCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCR 84 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCT----------TTHHHHHHHHHHHHHHHC---------CCSTTCC
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCc----------ccchHHHHHHHHhhhhhhhhhccccchhhccCCc
Confidence 3578899999632 1123 3579999998753 4999 32211 11111
Q ss_pred --CCHHHHhhchhhcCCCCC
Q 033603 85 --INANVAAGLPRQCGVSIP 102 (115)
Q Consensus 85 --in~~~a~~LP~~Cgv~~p 102 (115)
.-...|..||..||+..+
T Consensus 85 re~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 85 REVVKLTAASITAVCRLPIV 104 (124)
T ss_dssp HHHHHHHHTTHHHHTTCCEE
T ss_pred HHHHHHHHHhchhhcCCCCC
Confidence 112268899999999876
No 19
>1ag7_A Conotoxin GS; neurotoxin, MU-conotoxin, sodium channel blocker, cystine knot motif; HET: HYP CGU; NMR {Conus geographus} SCOP: g.3.6.1
Probab=20.06 E-value=38 Score=16.70 Aligned_cols=12 Identities=50% Similarity=1.184 Sum_probs=8.9
Q ss_pred CCCcccccchhh
Q 033603 46 FPPPPCCNGVRS 57 (115)
Q Consensus 46 ~Ps~~CC~~v~~ 57 (115)
.=+++||.|++-
T Consensus 8 rcppqccmglrc 19 (34)
T 1ag7_A 8 RCPPQCCMGLRC 19 (34)
T ss_dssp CSSSCBCTTEEE
T ss_pred CCChhhceeeec
Confidence 345689999875
Done!