BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033604
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q52KD8|EAF6_XENLA Chromatin modification-related protein MEAF6 OS=Xenopus laevis
GN=meaf6 PE=2 SV=1
Length = 188
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 79 NRKFKEAERLFSKSSVTSAAAVSSL 103
>sp|Q68ER9|EAF6_XENTR Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis
GN=meaf6 PE=2 SV=1
Length = 191
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 79 NRKFKEAERLFSKSSVTSAAAVSAL 103
>sp|Q5ZIX3|EAF6_CHICK Chromatin modification-related protein MEAF6 OS=Gallus gallus
GN=MEAF6 PE=2 SV=1
Length = 182
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 21 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 81 NRKFKEAERLFSKSSVTSAAAVSAL 105
>sp|Q58CU0|EAF6_BOVIN Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6
PE=2 SV=2
Length = 191
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 79 NRKFKEAERLFSKSSVTSAAAVSAL 103
>sp|Q9HAF1|EAF6_HUMAN Chromatin modification-related protein MEAF6 OS=Homo sapiens
GN=MEAF6 PE=1 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 79 NRKFKEAERLFSKSSVTSAAAVSAL 103
>sp|Q2VPQ9|EAF6_MOUSE Chromatin modification-related protein MEAF6 OS=Mus musculus
GN=Meaf6 PE=2 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAVCTKL 98
RK + +R+FS SSVTS A + L
Sbjct: 79 NRKFKEAERLFSKSSVTSAAAVSAL 103
>sp|Q6AZD3|EAF6_DANRE Chromatin modification-related protein MEAF6 OS=Danio rerio
GN=meaf6 PE=2 SV=1
Length = 192
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNF--KR 73
L+ LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN+++ +R
Sbjct: 19 LSELVKRKQELAETLVNLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKTDRR 78
Query: 74 PRKLQPEDRIFSLSSVTS-PAVC 95
RK + +R+FS SSVTS AVC
Sbjct: 79 NRKFKEAERLFSKSSVTSVAAVC 101
>sp|O14240|EAF6_SCHPO Chromatin modification-related protein eaf6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=eaf6 PE=1 SV=1
Length = 138
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L ++ KR + L +E+ +Y LE SYL+ GN +GFEG L + N SN +R
Sbjct: 25 LHEMIEKRQLLETSLIGLEDSIYRLEGSYLEKTSGTGNIIRGFEGLLKN--NASNLRRRA 82
Query: 76 KLQPEDRIFSLSSVTSPAV 94
DR+FSLSS++SP
Sbjct: 83 DYSESDRLFSLSSLSSPHT 101
>sp|Q6FJ46|EAF6_CANGA Chromatin modification-related protein EAF6 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=EAF6 PE=3 SV=1
Length = 91
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIG---QFGNAFKGFEGFLSSGKNTSNFK 72
L AL++ R +D+L ++ ++Y+ E+ Y G + N +GF+G + N SN
Sbjct: 12 LKALLADRKELEDKLDKLQQEIYDKESEYFDVDGGSKSYHNILRGFDGMSRTQSNNSN-- 69
Query: 73 RPRKLQPEDRIFSLSSVT 90
+ DRIFSLSS +
Sbjct: 70 ----MTNNDRIFSLSSAS 83
>sp|Q6BI21|EAF6_DEBHA Chromatin modification-related protein EAF6 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=EAF6 PE=3 SV=1
Length = 170
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L + K+ +L +E+ +YE E Y + +GN KGF+ F + NT + R
Sbjct: 25 LTQQILKKQELDSKLSKLEDSIYEKENEYFNE-SVYGNIVKGFQNFTKT--NTGGLNKRR 81
Query: 76 -KLQPEDRIFSLSSV 89
+D IFSLSSV
Sbjct: 82 ITYTDDDHIFSLSSV 96
>sp|Q75BT5|EAF6_ASHGO Chromatin modification-related protein EAF6 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=EAF6 PE=3 SV=1
Length = 98
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 18 ALVSKRSRFQDELRNIENQVYELETSYLQD--IGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
AL K+ + Q E I+ ++++ ET YL ++G KGF+GF GK+ S +
Sbjct: 18 ALHEKKVQEQ-EWDQIQQEIFDKETEYLSGNASSKYGTIVKGFDGF---GKHAS--QDSH 71
Query: 76 KLQPEDRIFSLSSV 89
Q +DRIFSLSS
Sbjct: 72 HFQDQDRIFSLSSA 85
>sp|Q59QC2|EAF6_CANAL Chromatin modification-related protein EAF6 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=EAF6 PE=3 SV=1
Length = 211
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L + K+ +L +E+ +Y+ E Y ++ GN KGFE F + KR
Sbjct: 71 LIQQILKKQELTRKLTTLEDSIYQKEIDYFEE-SPLGNIVKGFENFSKTSGGGGANKRKI 129
Query: 76 KLQPEDRIFSLSSV 89
+D IFSLSSV
Sbjct: 130 VYSEDDHIFSLSSV 143
>sp|Q6CPA6|EAF6_KLULA Chromatin modification-related protein EAF6 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=EAF6 PE=3 SV=1
Length = 115
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 18 ALVSKRSRFQDELRNIENQVYELETSYLQDI--GQFGNAFKGFEGF---------LSSGK 66
ALV K+ + + + ++E +VY+ ET YL + GN GF+GF LS
Sbjct: 18 ALVQKK-QLEAKWNSLEQEVYDKETEYLSQKPSSRMGNILLGFQGFNKSSSAQQILSDHS 76
Query: 67 NTSNFKRPRKLQPEDRIFSLSS 88
++SN + L DRIFSLSS
Sbjct: 77 HSSN---AQPLDDNDRIFSLSS 95
>sp|Q6C626|EAF6_YARLI Chromatin modification-related protein EAF6 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=EAF6 PE=3 SV=1
Length = 135
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 20 VSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQP 79
++K+ L ++E Q++ LE +YL++ GN KGF+ ++ ++ +
Sbjct: 20 INKKKTHDKNLNSLEEQIFTLEGAYLEETSH-GNLVKGFDTYIKGAQSKKRY----VFNE 74
Query: 80 EDRIFSLSSV 89
+DR+FSLSS
Sbjct: 75 DDRLFSLSSA 84
>sp|Q7SDW6|EAF6_NEUCR Chromatin modification-related protein eaf-6 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=eaf-6 PE=3 SV=1
Length = 179
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 34 ENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVT 90
E +Y+ ET YL++ GN GF+ + N + +R L +R+FS SS++
Sbjct: 38 EESIYQKETEYLENT-PAGNIITGFDNYTKGTANVAAQRRKTGLTDANRVFSRSSIS 93
>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1
Length = 557
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 17 AALVSKRSRF---QDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNF-K 72
A+L ++++RF E++N+E+ V +++ S L + G AF ++ + F K
Sbjct: 334 ASLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTK-----EILQDMAAFNK 388
Query: 73 RPRKLQPEDRIFSLSSVTSPAVCT 96
RP IF+LS+ TS A CT
Sbjct: 389 RPI-------IFALSNPTSKAECT 405
>sp|Q29558|MAOX_PIG NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2
SV=1
Length = 557
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 17 AALVSKRSRF---QDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNF-K 72
AAL +++ F +E++N+E V +++ + L + G AF E L K+ + F +
Sbjct: 331 AALTNEKEEFAHEHEEMKNLEAIVQDIKPTALIGVAAIGGAFS--EQIL---KDMAAFNE 385
Query: 73 RPRKLQPEDRIFSLSSVTSPAVCT 96
RP IF+LS+ TS A CT
Sbjct: 386 RPI-------IFALSNPTSKAECT 402
>sp|O84420|Y415_CHLTR Uncharacterized periplasmic metal-binding protein CT_415
OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_415
PE=3 SV=1
Length = 276
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 38 YELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVTSPAVCTK 97
YEL Y++ I Q FK EGF + + + K+ D ++ +T+ A C +
Sbjct: 61 YELSPKYIEKIRQVELWFKIGEGFEKTCERIISCKQV------DLAANIDKITNGACCQR 114
Query: 98 LLSDDYLPW 106
LS D W
Sbjct: 115 FLSFDTHTW 123
>sp|P47128|EAF6_YEAST Chromatin modification-related protein EAF6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EAF6 PE=1
SV=1
Length = 113
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 20/93 (21%)
Query: 14 ATLAALVSKRSRFQDELRNIENQVYELETSYLQDIGQ----------------FGNAFKG 57
A L + R +D N++ ++Y+ ET Y GN KG
Sbjct: 13 AELKKSLQDRREQEDTFDNLQQEIYDKETEYFSHNSNNNHSGHGGAHGSKSHYSGNIIKG 72
Query: 58 FEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVT 90
F+ F S + ++ DRIFSLSS T
Sbjct: 73 FDTFSKSHHSHAD----SAFNNNDRIFSLSSAT 101
>sp|Q4V8G7|CENPU_RAT Centromere protein U OS=Rattus norvegicus GN=Mlf1ip PE=2 SV=1
Length = 410
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 16 LAALVSKRSRF---QDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGK 66
++ + KR R QDEL +E Q+ +L+T Y D+ + +A K + FLS+ K
Sbjct: 302 ISNMEKKRQRLIDVQDELIRLEPQLKQLQTKY-DDLKKRKSALKNSKHFLSNLK 354
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 2 SLRQQRGNSN-PAATLAALVSKRSRFQDELRNIE-------------NQVYELETSYLQD 47
S QQ+ N+ + T A L + R Q EL I + +YE ++ L
Sbjct: 41 SATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTIL-- 98
Query: 48 IGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVTSPAVCTKLLSDDYLP 105
G G+ ++G FL ++ +P K+ RI+ + + +C +L D++ P
Sbjct: 99 -GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 2 SLRQQRGNSN-PAATLAALVSKRSRFQDELRNIE-------------NQVYELETSYLQD 47
S QQ+ N+ + T A L + R Q EL I + +YE ++ L
Sbjct: 41 SATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTIL-- 98
Query: 48 IGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVTSPAVCTKLLSDDYLP 105
G G+ ++G FL ++ +P K+ RI+ + + +C +L D++ P
Sbjct: 99 -GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 2 SLRQQRGNSN-PAATLAALVSKRSRFQDELRNIE-------------NQVYELETSYLQD 47
S QQ+ N+ + T A L + R Q EL I + +YE ++ L
Sbjct: 41 SATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTIL-- 98
Query: 48 IGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVTSPAVCTKLLSDDYLP 105
G G+ ++G FL ++ +P K+ RI+ + + +C +L D++ P
Sbjct: 99 -GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,061,315
Number of Sequences: 539616
Number of extensions: 1565427
Number of successful extensions: 3801
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3776
Number of HSP's gapped (non-prelim): 30
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)